mRNA_F-serratus_M_contig1363.2671.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: D7G8M8_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M8_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.150e-45 Identity = 118/275 (42.91%), Postives = 145/275 (52.73%), Query Frame = 3
Query: 558 RRAFFDVPEAVAVEALAALAARDDHHLPERFEGSAVGGVVSD------ARGGEREPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKELRMRANDFRIGGTHIFMLGQEDHVAWKGKRT--MADWVYEQAWSDPNRSLEGLDQSWVSEGISNGKNLAHGLAEEGWTTVAE 1358
+R FF + E EA AA E G GG V+D A G +S+ AHR +L+LRSD ++AML SGMRE+F + LVKD+RPAVF ALL YLY+DTL+L+RP+DI ELLVVANQYTL DL +LCEGFL TEGW LP +LR RAN FR H+FMLGQ DHV WKG + MADWV ++ SD + SW+ + + LA EEGW T +E
Sbjct: 53 KRRFFGLSETAEAEAEAAAV------KAELEGGRRRGGAVADKAPAPPAGEGGGAKDSIDAHRALLSLRSDPMRAMLRSGMRESFTMDVLVKDIRPAVFTALLTYLYTDTLQLQRPEDITELLVVANQYTLTDLLSLCEGFL-----------------------------------------TEGWMHLPPDLRARANAFRSRHVHLFMLGQRDHVTWKGGESEMMADWVLDRIKSDGS--------SWMDDVTEEEEALAM-AGEEGWQTASE 271
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.550e-32 Identity = 78/177 (44.07%), Postives = 115/177 (64.97%), Query Frame = 3
Query: 714 VHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKELRMRANDFRIGGTHIFMLGQEDH---VAWKGKRTMADWVYEQ 1235
+ AHR +LA RS L+AML GMRE+ A V+D RP+VF ALL Y+Y+D L P+D++EL+V A QY L++L+ALCEG++Q ++D +A +Y YADAL + + R LT +LR+W RV ++ + LP EL++ + R H+FML DH VA G R +A +V+++
Sbjct: 1531 MRAHRAILAQRSAPLRAMLCGGMRESLSAVVDVRDTRPSVFAALLLYVYTDRLMPAAPEDVVELMVAACQYGLEELAALCEGYIQRSMDASDAPAVYQYADALHLDTLKRRALTAMLRHWPRVRDSDAFRRLPAELQVEIDRVRRCDAHVFMLDHADHELVVAHYGSRELAPFVHDK 1707
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: T0QPW3_SAPDV (BTB domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0QPW3_SAPDV) HSP 1 Score: 109 bits (273), Expect = 3.130e-21 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 3
Query: 714 VHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
VHAHR +LA RSD KAM SGMRE + E V+ +R AVF LL+Y+Y+DT+++ P+ +EL A+ YTL L LCE +Q L ENA L AD L + FI+R+++ VT+TEG+ L +EL
Sbjct: 409 VHAHRAILAARSDHFKAMFSSGMREARELEVHVETIRAAVFLLLLEYMYNDTVDVPTPELAIELYAAADMYTLDRLKGLCELVVQKGLTVENAGVLLSAADELHAGRLRDLCMHFIVRHFDTVTKTEGFQLLSREL 544
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: A0A5D6YMT2_9STRA (BTB domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMT2_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.350e-20 Identity = 60/140 (42.86%), Postives = 87/140 (62.14%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
E +VHAHR VLA RSD +AM SGMRE+ + E ++ R VF ALL+Y+Y DT+++ +EL A+ YTL+ L LCE +Q ++ ENAA L+ AD L L FI+R++++VT+TEG+ L ++L
Sbjct: 418 EGRAVHAHRAVLAARSDHFRAMFSSGMRESREHEVPLRHTRVPVFLALLEYIYVDTVDVGAEM-ALELFAAADLYTLERLQGLCEIIVQKSVAVENAAALFQSADELHSHRLREVCLAFIVRHFDQVTKTEGFANLSRDL 556
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: F0W8U3_9STRA (Regulator of chromosome condensation (RCC1)like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8U3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.650e-17 Identity = 51/140 (36.43%), Postives = 86/140 (61.43%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
E +++HAHR +L+ RS+ +AM SGMRE+ + + ++ +R VF ALL+++Y+D + PQ +EL A+ YTL L +CE + A+ +NAA A+ L H L+FI+R+++ VT+T+G+ L ++L
Sbjct: 399 EGQAIHAHRAILSARSEHFRAMFASGMRESREEKIHLQQIRIPVFLALLEFIYADNVTAN-PQVAIELYAAADLYTLDRLKGICEVLVHKAITVDNAATYLQAAEELNCDRVRHICLSFIIRHFDTVTKTQGFANLSRDL 537
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: M4BRC5_HYAAE (BTB domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRC5_HYAAE) HSP 1 Score: 96.7 bits (239), Expect = 2.860e-17 Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
E +VH+HR +LA RSD +AM SGMRE+ + E + R VF ALL+Y+Y DT+ + +EL A+ YTL L LCE +Q ++ +NAA L+ AD L L+++++N++ VT+++G+ L ++L
Sbjct: 319 EGRAVHSHRAILAARSDHFRAMFSSGMRESHEQEIPLMHTRVPVFLALLEYIYVDTINVGAEM-ALELYAAADLYTLDRLKGLCEIIVQKSISVDNAAALFQSADDLHSHRLREICLSYMVQNFDMVTKSDGFAGLSRDL 457
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: H3H2V0_PHYRM (BTB domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3H2V0_PHYRM) HSP 1 Score: 94.0 bits (232), Expect = 3.360e-16 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
E +VH+HR +LA RSD +AM SGMRE+ + E + R VF ALL+Y+Y D++ + +EL A+ YTL L LCE +Q ++ ENAA L+ AD L L++++ N++ VT+++G+ L ++L
Sbjct: 399 EGRAVHSHRAILAARSDHFRAMFSSGMRESHEQEIPLMHTRVPVFLALLEYIYVDSINVGAEM-ALELYAAADLYTLDRLKGLCEIIVQKNINVENAAALFQSADDLHSYRLREICLSYMVLNFDMVTKSDGFAGLSRDL 537
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: A0A2D4CB68_PYTIN (BTB domain-containing protein (Fragment) n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CB68_PYTIN) HSP 1 Score: 93.6 bits (231), Expect = 4.390e-16 Identity = 51/140 (36.43%), Postives = 84/140 (60.00%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
E + H HR +LA RSD +AM SGMRE+ ++E + +R VF AL++Y+Y D++++ +EL A+ YTL L LCE +Q + +NAA L+ AD L L++++R+++ VT+T+G+ L ++L
Sbjct: 396 EGRAXHCHRAILAARSDHFRAMFSSGMRESRESEIPLTHMRIPVFLALMEYIYVDSVDVGAEM-ALELFAAADLYTLDRLKGLCEIIVQKNITVDNAATLFQTADDLQATRLREICLSYLVRHFDAVTKTDGFAHLSRDL 534
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: A0A024GES4_9STRA (BTB domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GES4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.900e-16 Identity = 49/140 (35.00%), Postives = 84/140 (60.00%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPKEL 1121
E +++HAHR +L+ RS+ +AM SGMRE+ + ++ +R VF ALL+++Y+D + P +EL A+ YTL L +CE + A++ +NAA AD L ++FI+R+++ VT+T+G+ L ++L
Sbjct: 399 EGQAIHAHRAILSARSEHFRAMFASGMRESREETIHLQQLRLPVFLALLEFMYADNVT-GNPHIAIELYAAADLYTLDRLKKICEALVHRAINVDNAATFLQAADELNXXXXXXXXVSFIVRHFDTVTKTQGFANLSRDL 537
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Match: A0A4D9CMR4_9STRA (BTB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMR4_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 6.890e-13 Identity = 45/138 (32.61%), Postives = 81/138 (58.70%), Query Frame = 3
Query: 702 EPESVHAHRVVLALRSDLLKAMLGSGMRETFDAETLVKDVRPAVFFALLKYLYSDTLELERPQDIMELLVVANQYTLQDLSALCEGFLQGALDEENAAHLYHYADALAMPIFEHRVLTFILRNWNRVTRTEGWCTLPK 1115
E VHAH+V L +RS +A+ GM+E E ++ D+R +F +LL++LY+D L ++ P +L A+++ + L +LCE + +L +NAA ++H AD + L+FIL+N++ V++T G+ + +
Sbjct: 552 EGRPVHAHKV-LCIRSPYFRALFTGGMKEAHQREIVLPDIRFPIFVSLLEFLYTDALRIDLPSSF-QLFEAADRFGVDRLKSLCEHKMLTSLSLDNAALIFHTADVYQAINLREKCLSFILQNFDAVSKTAGFAEMGR 687 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1363.2671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1363.2671.1 >prot_F-serratus_M_contig1363.2671.1 ID=prot_F-serratus_M_contig1363.2671.1|Name=mRNA_F-serratus_M_contig1363.2671.1|organism=Fucus serratus male|type=polypeptide|length=484bp MGAGGDDAGRKRGMNQAHVDANTSARARAHSPPGAGLASTSPIIEGLRYPback to top mRNA from alignment at F-serratus_M_contig1363:121372..128132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1363.2671.1 ID=mRNA_F-serratus_M_contig1363.2671.1|Name=mRNA_F-serratus_M_contig1363.2671.1|organism=Fucus serratus male|type=mRNA|length=6761bp|location=Sequence derived from alignment at F-serratus_M_contig1363:121372..128132- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1363:121372..128132- >mRNA_F-serratus_M_contig1363.2671.1 ID=mRNA_F-serratus_M_contig1363.2671.1|Name=mRNA_F-serratus_M_contig1363.2671.1|organism=Fucus serratus male|type=CDS|length=2904bp|location=Sequence derived from alignment at F-serratus_M_contig1363:121372..128132- (Fucus serratus male)back to top |