mRNA_F-serratus_M_contig1357.2639.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1357.2639.1
Unique NamemRNA_F-serratus_M_contig1357.2639.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: D7FLI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI5_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 2.280e-122
Identity = 221/437 (50.57%), Postives = 278/437 (63.62%), Query Frame = 2 
Query:   80 LVETRTYDGDRLNFAEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTPA----FAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGY 1378
            + + RTY+G RL   E +       F AP +S+ CERWAVL+S+      ++   QL + E WCVV+VGD  Q    +++    V  L+  DQ+ LPY I  L+P   FGRKN+GY+YA+HHGA VIYD+D D+ LI P+  +P+       A S +TPA    FA  P  + VHNPY CFGGP N WPRGFPLD+I+ D   +RC+    D A  G      +   LGVVQ+LANHDPDVD+VYR++  PG   +PFDFE        V  G        S L+IVP  AF+PYNAQATLHF PAFWGMLLPVTV+ RV DIWR YFTQ LL +T AV AFAP WV+Q R+  N LA+F+AELPLY+QSGALVA+L  +RR+  A  +A  G      +PER+ AL + MYE GVL + DV L+QAWL+DL S GY
Sbjct:    1 MEKVRTYEGARLPAPEAM-------FPAPLDSEKCERWAVLTSIFEP---TDTVRQLGAAEDWCVVVVGD--QNGPAEYNV-EGVIYLTPQDQEQLPYRIVPLLPWNHFGRKNIGYLYAVHHGATVIYDVDDDNALIHPEAGVPH-------ALSPVTPASTTSFAVGPE-AFVHNPYGCFGGPGNVWPRGFPLDSIN-DADSNRCDEVAVDSA--GESAAPEEGWRLGVVQALANHDPDVDAVYRLTYPPGG--LPFDFE----VPDPVPEGM-------SSLKIVPPAAFTPYNAQATLHFPPAFWGMLLPVTVHGRVSDIWRSYFTQTLLTSTGAVTAFAPAWVEQIRNPHNYLADFQAELPLYEQSGALVAFLDGHRRQSVAASEAGVG------LPERIDALMVEMYEYGVLEQADVQLSQAWLEDLYSVGY 394
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: A0A6H5JQ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ39_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 2.600e-103
Identity = 201/450 (44.67%), Postives = 265/450 (58.89%), Query Frame = 2 
Query:   44 FHGCLYPGTLPALVETRTYDGDRLNF--AEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVFE 1387
            F      G + A+ + RT++G R++F  AEI+ G        P + ++CE+WAVL+S+      +    QL+ L GWCVV+VGD + G  E H     V+ L+  DQD+LPY I  ++P   FGRKN+GYMYAI HGAKVIYD+D D+ LI P++ +P+    ++    ++   F+  P  S VHNPY CFG P  +WPRG+PL AI  D  P        DG    R         +GVVQ+LANHDPDVD++YR++  PG   +PF F   P   G+            S LR VPA   +PYNAQATLHF  AFWGMLLPVTV+ RV DIWR YFTQALLP   AV  FAP WV+Q R+  + L +F+AELPLY+++  LV +L  Y        D    + S  L    ++ LA+ MYE G++  +DV LTQAWLQDL  +GY  E
Sbjct:   39 FESSATGGKVFAMEQIRTFEGPRVDFDAAEILPGPP------PADEEMCEKWAVLTSIFEP---TETVKQLAELRGWCVVVVGD-KNGPAEYH--VTGVKYLTPGDQDALPYRITEILPWNHFGRKNVGYMYAIQHGAKVIYDVDDDNALIHPEEGVPHAGVSSI--EDNVLSRFSGHPS-SSVHNPYGCFGAPGVSWPRGYPLPAIQDD-SPHHAAYCDVDGISGSR---------IGVVQALANHDPDVDAIYRLTHPPGG--LPFSFN--PGAPGTPE----------STLRGVPADKMTPYNAQATLHFPVAFWGMLLPVTVHGRVSDIWRSYFTQALLPLANAVPVFAPAWVEQIRNPHDYLGDFQAELPLYERASTLVEFLLGYA-------DEKGASNSGGLTWSLVEDLAVTMYEYGIVDEEDVVLTQAWLQDLRDSGYDLE 442
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: D8LCM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM9_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 5.100e-99
Identity = 196/441 (44.44%), Postives = 253/441 (57.37%), Query Frame = 2 
Query:   77 ALVETRTYDGDRLNFAEII-SGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTV-----DQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAE-FRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGY 1378
            ++ + RTY G R+       S E    F  P     CERWAVL+   SA   ++   QL+ L  WCVV+VGD         D P     +  V     DQ++LPY I  L+P    GRKN+GY+YAIHHGAKVIYD+D    L+RP++ +P+ +  +     S    F+   P + VHNPYPCFG     WPRGFP   I  D   S C + +  G    +R        +GVVQ+LA+++PDVD++YRM+  P    + F  E  P                GS LR+VPA  FSPYNA+ATLHF  AFWGMLLPVTV+ERV DIWR YFTQ LLP+  AVV FAPPWV ++    N   + F+AELPLY+QSGALV +L +YR    A++D     AS      R++AL++ MYE G++   DVALTQAWL+DL   GY
Sbjct:   55 SMEKVRTYAGPRMEIRTTPPSVEPSSLFPPPAAEDTCERWAVLA---SADEPTDAVKQLAELGEWCVVVVGDK--------DGPTEYNVVGVVLLTPSDQEALPYRITDLIPWNHVGRKNIGYLYAIHHGAKVIYDVDDAHVLMRPEEGVPFAETSSAEHELSF---FSR--PSTCVHNPYPCFGASGVVWPRGFPPAKIR-DKSSSMCGVVMGGGGAGEQR--------VGVVQALADNNPDVDALYRMTCAPRGSPLSFVEESPPLP--------------GSSLRLVPAWTFSPYNAKATLHFPVAFWGMLLPVTVHERVSDIWRSYFTQTLLPSAGAVVGFAPPWVTRELEGPNSYRDDFQAELPLYEQSGALVDFLLQYRH---AVEDEASAQASPESQASRIEALSVTMYEHGIVEGDDVALTQAWLKDLRDVGY 453
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: D7FZB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB1_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 3.660e-79
Identity = 160/322 (49.69%), Postives = 206/322 (63.98%), Query Frame = 2 
Query:  428 MYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTP---AFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVF 1384
            MYAIHHGA+VIYD+D  + L+ P+  +P++D      +SS  P    F +D   ++VHNPYPCFG P   WPRGFPL+ +            + D + T   E       +GVVQ+LANHDPDVD++YRM+  PG   +PF F    A+  S A  +        +LR VPA+AF+PYNAQATLHF  AFWG+LLP TV+ RV D WR YFTQALLPA  AV AF+P WV+Q  + RN LA+F+AE PLYQ+SGALV +L +YR  +         NASA  +P  ++ALA+AMYE G++  +DVAL QAWL+DL  AGY F
Sbjct:    1 MYAIHHGAEVIYDVDDRNALVDPQQGVPHSD-----VSSSGKPDVFRFHSDES-AIVHNPYPCFGAPGVVWPRGFPLNKVQ-----------LVDSS-TCSSEGAMDSQVIGVVQALANHDPDVDAIYRMTYPPGG--LPFSFV---AEDSSKAETR--------NLRAVPASAFTPYNAQATLHFQVAFWGLLLPTTVDGRVSDTWRSYFTQALLPAVGAVAAFSPGWVEQVGNPRNYLADFKAEFPLYQRSGALVEFLLQYRDLVS--------NASA--LPLEIEALAVAMYEYGIVEDEDVALMQAWLEDLRDAGYAF 281
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: A0A8B7XWL1_ACAPL (probable glycosyltransferase STELLO2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWL1_ACAPL)

HSP 1 Score: 266 bits (680), Expect = 5.430e-77
Identity = 169/444 (38.06%), Postives = 237/444 (53.38%), Query Frame = 2 
Query:   65 GTLPALVETRTYDGDRLNFAEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVP--LGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVFEL 1390
            G    L + RT++G R     + S      F +P   + C+RW V   VT+ +  + I  ++SSL+GWC+V+V D +    +  + P  V  L  V Q+S  Y +  ++P   FGRKN+GY+YAI HGAK+IYD D D+  + P+  +P  D  N+  A  +T   A       V NPYP FG     WPRGFPL  I         E G              K +P  +GVVQ LA HDPDVD++YR+     T E+PFDF   P +                   +VP   FSPYNAQATLH + AFWGMLLPVTV+ RV DIWR YFTQ LL      +AF  P+V+Q+R+  N +A+F  E+ LY ++ +L+ +L +++ R            S+  + +RL  L I +YE   +G +DVA+T+AW++DL    Y+F L
Sbjct:   62 GRAYELRKVRTFEGSRA----LPSAASCRPF-SPNAGRKCDRWIV---VTTIYKPTPILPKISSLKGWCMVVVADKKGP--QSMNIPN-VDYLDVVQQESCGYKLCRVVPWNHFGRKNIGYLYAIEHGAKLIYDTDDDNAPLFPE--VPAFD--NVGYARYVTAGGA-------VWNPYPTFGQNTKVWPRGFPLSRIKDQSTKIAAESG--------------KALPQQVGVVQFLAQHDPDVDAIYRL-----TSELPFDFNPTPRRL------------------VVPKRMFSPYNAQATLHAHDAFWGMLLPVTVHSRVTDIWRSYFTQRLLWDVNLHLAFHSPFVRQERNQHNYMADFDGEMDLYYKTESLIKFLQDWKPR-----------DSSPSLQQRLLDLTIELYEYDFIGAEDVAMTKAWIEDLQCLDYIFPL 435
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: UPI0018D5FB2F (probable glycosyltransferase STELLO1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5FB2F)

HSP 1 Score: 260 bits (665), Expect = 1.980e-74
Identity = 172/447 (38.48%), Postives = 235/447 (52.57%), Query Frame = 2 
Query:   65 GTLPALVETRTYDGDRLNFAEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVFELPKVLL 1405
            G +  L + RTY+G R   A   S   +    + +  + C+RW V   VT+ H  + I  ++SSL GWC+V+V D +       D P  V  L  V Q+S  Y I  L+P   FGRKN+GY+YAI HGA++IYD D D+  +   D++P  D  N+  +  L  A         + NPYP FG     WPRGFPL  I  DP   R ++   +G    RR         GVVQ LA HDPD+D++YR+     T E+P++F+  P +                    VP    SPYNAQATLH + AFWG+LLPV+V+ RV DIWR YFTQ LL      VAF  P+V Q R+  N +A+F +E+ LY ++  LV +L E+               S+T + ++L  LAI +YE    G +DV LT+AW+QDL   GY F L   L+
Sbjct:   73 GRVYQLSKARTYEG-RRELAPATSTSCKP--YSARAGRRCDRWIV---VTTIHPSTPILRKISSLSGWCMVVVADKKGP--VSMDIPN-VDYLDVVQQESCGYQICRLLPWNHFGRKNIGYLYAIEHGAEMIYDTDDDNQPLF--DELPAFD--NVGYSKQLHVA-------GHLWNPYPQFGANTKMWPRGFPLSRIT-DPATKRVDV--INGTVAARR--------AGVVQFLAQHDPDIDAIYRL-----TNELPYEFDPAPRRL------------------FVPERVMSPYNAQATLHAHQAFWGLLLPVSVHGRVSDIWRSYFTQRLLWDIGMQVAFHSPFVVQYRNPHNYMADFDSEMDLYYKAETLVKFLQEWTPEK-----------SSTSLQQKLLDLAIRLYEFDFFGVQDVTLTEAWIQDLQCLGYKFPLHPSLI 454
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: UPI0018D8F1E1 (probable glycosyltransferase STELLO1 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8F1E1)

HSP 1 Score: 258 bits (659), Expect = 1.060e-73
Identity = 177/463 (38.23%), Postives = 239/463 (51.62%), Query Frame = 2 
Query:   38 YQFHGCLYP------GTLPALVETRTYDGDR-LNFAEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVFELPKVLL 1405
            + F G + P      G +  L + RTY+G R L  A  IS +        +  + C RW V   VT+ H  + I  ++SSL GWC+V+V D +       D P  V  L  V Q+S  Y I  L+P   FGRKN+GY+YAI HGA++IYD D D+  +   D++P  D  N+  +  L  A         + NPYP FG     WPRGFPL  I  DP   R  + ++ G    RR         GVVQ LA HDPD+D++YR+     T E+P++F+  P +                    VP    SPYNAQATLH + AFWG+LLPV+V+ RV DIWR YFTQ LL      VAF  P+V Q R+  N +A+F +E+ LY ++  LV +L E+               S+T + + L  LAI +YE    G +DV LT+AW+QDL   GY F L   L+
Sbjct:   47 FDFFGQIPPHIQGTTGRVYQLSKARTYEGRRELAPATSISCKPYSA----RAGRRCGRWIV---VTTIHPSTPILRKISSLSGWCMVVVADKKGP--VTMDIPN-VDYLDVVQQESCGYQICRLLPWNHFGRKNIGYLYAIEHGAEMIYDTDDDNQPLF--DELPAFD--NVGYSKQLHVA-------GHLWNPYPQFGANTKMWPRGFPLSRIM-DPATKR--VNVSSGTVAARR--------AGVVQFLAQHDPDIDAIYRL-----TNELPYEFDPAPRRL------------------FVPERVMSPYNAQATLHAHQAFWGLLLPVSVHGRVSDIWRSYFTQRLLWDIGLQVAFHSPFVVQYRNPHNYMADFDSEMDLYYKAETLVKFLQEWTPEK-----------SSTSLQQILLHLAIRLYEFDFFGVQDVTLTEAWIQDLQCLGYKFPLHPSLI 443
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: A0A8B7ZB34_ACAPL (probable glycosyltransferase STELLO2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZB34_ACAPL)

HSP 1 Score: 254 bits (648), Expect = 2.190e-71
Identity = 163/444 (36.71%), Postives = 224/444 (50.45%), Query Frame = 2 
Query:   65 GTLPALVETRTYDGDRLNFAEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDS----TLIRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVF 1384
            G +  L + RT++G R     + S      F   K  + C+RW V   VT+ + E+ I  ++SSL GWC+V+V D +     + +    V  L  V Q+S  Y I  L+P   FGRKN+GY+YAI HGAK+IYD D D+     ++   D + Y+  + +                S + NPYP FG     WPRGFPL  I           G A G +            +GVVQ LA HDPDVD++YR+     T E+P++F     +                   +VP    SPYNAQ TLH Y AFWGMLLPVTV+ RV DIWR YFTQ L+      +AF  P+V Q R+  N +A+F +E+ LY ++  LV +L  +               S T +P++L  LAI +YE   +G  DV+LT+AW+QDL   GY F
Sbjct:  149 GRIYGLKQVRTFNGKRA----LSSANSCKPFST-KPGRKCDRWIV---VTTIYPETPILHKISSLSGWCMVVVADKKGPVSMNIN---NVDYLDVVQQESCGYHICRLLPWNHFGRKNIGYLYAIEHGAKMIYDTDDDNEPLLNVVPAFDNVGYSHHVKIQ---------------SHLWNPYPRFGTNTKIWPRGFPLGHITDATTKKETVYGKATGNQ------------VGVVQYLAQHDPDVDAIYRL-----TNELPYEFNPSARRY------------------VVPEQVLSPYNAQTTLHAYDAFWGMLLPVTVHGRVSDIWRSYFTQRLMWDIGKRLAFHSPFVVQKRNPHNYMADFDSEMDLYYKAENLVEFLLRFTTE------------SPTTLPQKLLDLAIKLYEYEFIGAGDVSLTEAWIQDLQCLGYTF 519
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: UPI0014553AFF (probable glycosyltransferase STELLO2 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553AFF)

HSP 1 Score: 247 bits (630), Expect = 6.090e-70
Identity = 167/451 (37.03%), Postives = 227/451 (50.33%), Query Frame = 2 
Query:   65 GTLPALVETRTYDGDRLNFAEIISGEDRGGFEAP-KESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIR---PKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATL--IPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVFELPKV 1399
            G +  L + RT+ G R       S E  G +     +++ C+RW V++++    G   I   L +  GWC+V+V D +       D P  V  L+  +Q +  Y I  L+P   F RKN+GYMYAI HGAKVIYD D D+ L+    P  ++ +   + +                S V NPYP FG   + WPRGFPL+ I  D   S   +G A G              +GVVQ LA HDPDVD++YRM     T ++P+DF   P +                   ++P    SPYNAQ T H   AFWGMLLP+TV+ RV DIWR YFTQ LL      ++F  P V Q+R+  N LA+F +E+ LY ++  LV +L  +               S TL  + +RL  + I +YE G +   DVALT+AW+QDL S GYVF  PKV
Sbjct:   54 GNVHKLEKIRTFHGKR-------SVEPAGSYTPSWSQNKQCDRWIVVTTIFEPTG---IMKTLGATSGWCMVVVADKKGP--VSMDIPNIVH-LTVAEQKNCRYRICQLIPWNHFSRKNIGYMYAIEHGAKVIYDTDDDNGLLADLMPDFEVHFAQHVKL---------------DSYVWNPYPEFGPSTHIWPRGFPLNRITDDTTKSLTLVGAAKGED------------IGVVQYLAQHDPDVDAIYRM-----TYDLPYDFNLEPKRF------------------VLPPRVLSPYNAQTTHHSQDAFWGMLLPITVHSRVSDIWRSYFTQRLLWDIGKRLSFHSPAVVQNRNAHNYLADFDSEMDLYYKADNLVKFLLGW-------------TPSVTLASLEQRLFEMQIDLYEYGFIEAGDVALTEAWIQDLQSLGYVF--PKV 426
[Close]
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Match: A0A7S1Q3U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q3U1_ALECA)

HSP 1 Score: 232 bits (591), Expect = 2.580e-64
Identity = 159/452 (35.18%), Postives = 225/452 (49.78%), Query Frame = 2 
Query:   83 VETRTYDGD--------RLNFAEIISGEDRGGFEAPKESQLCERWAVLSSVTSAHGESNITAQLSSLEGWCVVIVGDTRQGDHEDHDAPRRVRKLSTVDQDSLPYGIASLMPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTL---------IRPKDKIPYTDPLNMYAASSLTPAFAADPPPSVVHNPYPCFGGPRN-AWPRGFPLDAIDGDPGPSRCEIGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMPFDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAFWGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRLAEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQALAIAMYERGVLGRKDVALTQAWLQDLVSAGYVF 1384
            V  R + GD        +L+FA    G  R   +  +++  CERW V++S+      + +  +++  +GWC V+V D  +    ++D    V  L+   Q +L + I   +P   FGRKN+GY+YAI HGAKVIYD D D+ L         + P + +P    +N+ +   + P  +A      + NPYP F       WPRGFPLD + G             GA        +   P  V Q LA+ DPDVD+V+R+     T ++P  F G P +   V A               P   F PYNAQAT+H Y AFWG+LLPVTV+ RV DIWR Y TQ LL     VV+F PP V  DR   + L +F +E  LY +S A+V++LA             R  + A  + ERL+ L  A+Y RG +   D+ L QAW++DL++ GY F
Sbjct:   21 VSGRRFSGDVIREVAKEQLSFA----GTRRSDLKTIRDATQCERWIVVTSIFQPSPATRMLGKMTR-QGWCYVVVAD--ENGPSEYDDVEGVIYLTVERQRALHFQIVDKIPWRHFGRKNIGYLYAIAHGAKVIYDTDDDNRLKTEDIPILGVAPGETLPRMSQVNV-SRPWVDPLRSAR-----LFNPYPSFRPTCGYIWPRGFPLDHVQGH------------GADNWTLTAAQMDQPPAVQQYLADEDPDVDAVFRL-----TRKLPCQFGGLPPELPEVLA--------------TPPNVFLPYNAQATVHLYEAFWGLLLPVTVHGRVSDIWRAYLTQKLLWDIGQVVSFTPPHVIHDRVAHDYLKDFHSEQDLYLKSTAMVSFLA-------------RWTSDAPTLVERLEQLWAALYARGFVELGDLQLAQAWIRDLLALGYDF 415
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1357.2639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLI5_ECTSI2.280e-12250.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQ39_9PHAE2.600e-10344.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCM9_ECTSI5.100e-9944.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FZB1_ECTSI3.660e-7949.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8B7XWL1_ACAPL5.430e-7738.06probable glycosyltransferase STELLO2 n=1 Tax=Acant... [more]
UPI0018D5FB2F1.980e-7438.48probable glycosyltransferase STELLO1 n=2 Tax=Patir... [more]
UPI0018D8F1E11.060e-7338.23probable glycosyltransferase STELLO1 n=1 Tax=Patir... [more]
A0A8B7ZB34_ACAPL2.190e-7136.71probable glycosyltransferase STELLO2 n=1 Tax=Acant... [more]
UPI0014553AFF6.090e-7037.03probable glycosyltransferase STELLO2 n=1 Tax=Aster... [more]
A0A7S1Q3U1_ALECA2.580e-6435.18Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1357contigF-serratus_M_contig1357:75164..86034 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.0
Seed ortholog evalue4.2e-88
Seed eggNOG ortholog2880.D7FLI5
Hectar predicted targeting categoryother localisation
GOsGO:0000271,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0006073,GO:0006109,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009664,GO:0009832,GO:0009889,GO:0009987,GO:0010383,GO:0010556,GO:0010675,GO:0010962,GO:0010981,GO:0012505,GO:0016043,GO:0016051,GO:0019222,GO:0030243,GO:0030244,GO:0030312,GO:0031323,GO:0031326,GO:0031410,GO:0031982,GO:0031984,GO:0032881,GO:0032885,GO:0032950,GO:0032951,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045229,GO:0050789,GO:0050794,GO:0051128,GO:0051273,GO:0051274,GO:0052324,GO:0052541,GO:0060255,GO:0065007,GO:0070589,GO:0070592,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097708,GO:0098791,GO:1901576,GO:1903338,GO:2000112,GO:2001006,GO:2001009
EggNOG free text desc.plant-type cell wall cellulose biosynthetic process
EggNOG OGs28KU8@1,2QTAG@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2554
Cds size1344
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1357.2639.1prot_F-serratus_M_contig1357.2639.1Fucus serratus malepolypeptideF-serratus_M_contig1357 78654..85203 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929338.7104592-UTR-F-serratus_M_contig1357:75163..752061622929338.7104592-UTR-F-serratus_M_contig1357:75163..75206Fucus serratus maleUTRF-serratus_M_contig1357 75164..75206 +
1690962805.3380663-UTR-F-serratus_M_contig1357:75163..752061690962805.3380663-UTR-F-serratus_M_contig1357:75163..75206Fucus serratus maleUTRF-serratus_M_contig1357 75164..75206 +
1622929338.7276444-UTR-F-serratus_M_contig1357:77739..779951622929338.7276444-UTR-F-serratus_M_contig1357:77739..77995Fucus serratus maleUTRF-serratus_M_contig1357 77740..77995 +
1690962805.3564262-UTR-F-serratus_M_contig1357:77739..779951690962805.3564262-UTR-F-serratus_M_contig1357:77739..77995Fucus serratus maleUTRF-serratus_M_contig1357 77740..77995 +
1622929338.7446764-UTR-F-serratus_M_contig1357:78564..786531622929338.7446764-UTR-F-serratus_M_contig1357:78564..78653Fucus serratus maleUTRF-serratus_M_contig1357 78565..78653 +
1690962805.3641276-UTR-F-serratus_M_contig1357:78564..786531690962805.3641276-UTR-F-serratus_M_contig1357:78564..78653Fucus serratus maleUTRF-serratus_M_contig1357 78565..78653 +
1622929338.8943105-UTR-F-serratus_M_contig1357:85203..853711622929338.8943105-UTR-F-serratus_M_contig1357:85203..85371Fucus serratus maleUTRF-serratus_M_contig1357 85204..85371 +
1690962805.4520166-UTR-F-serratus_M_contig1357:85203..853711690962805.4520166-UTR-F-serratus_M_contig1357:85203..85371Fucus serratus maleUTRF-serratus_M_contig1357 85204..85371 +
1622929338.9155738-UTR-F-serratus_M_contig1357:85380..860341622929338.9155738-UTR-F-serratus_M_contig1357:85380..86034Fucus serratus maleUTRF-serratus_M_contig1357 85381..86034 +
1690962805.460533-UTR-F-serratus_M_contig1357:85380..860341690962805.460533-UTR-F-serratus_M_contig1357:85380..86034Fucus serratus maleUTRF-serratus_M_contig1357 85381..86034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929338.7647247-CDS-F-serratus_M_contig1357:78653..787191622929338.7647247-CDS-F-serratus_M_contig1357:78653..78719Fucus serratus maleCDSF-serratus_M_contig1357 78654..78719 +
1690962805.3716586-CDS-F-serratus_M_contig1357:78653..787191690962805.3716586-CDS-F-serratus_M_contig1357:78653..78719Fucus serratus maleCDSF-serratus_M_contig1357 78654..78719 +
1622929338.7794003-CDS-F-serratus_M_contig1357:79767..798821622929338.7794003-CDS-F-serratus_M_contig1357:79767..79882Fucus serratus maleCDSF-serratus_M_contig1357 79768..79882 +
1690962805.3798008-CDS-F-serratus_M_contig1357:79767..798821690962805.3798008-CDS-F-serratus_M_contig1357:79767..79882Fucus serratus maleCDSF-serratus_M_contig1357 79768..79882 +
1622929338.7929058-CDS-F-serratus_M_contig1357:81155..814821622929338.7929058-CDS-F-serratus_M_contig1357:81155..81482Fucus serratus maleCDSF-serratus_M_contig1357 81156..81482 +
1690962805.3875015-CDS-F-serratus_M_contig1357:81155..814821690962805.3875015-CDS-F-serratus_M_contig1357:81155..81482Fucus serratus maleCDSF-serratus_M_contig1357 81156..81482 +
1622929338.8092716-CDS-F-serratus_M_contig1357:81494..815591622929338.8092716-CDS-F-serratus_M_contig1357:81494..81559Fucus serratus maleCDSF-serratus_M_contig1357 81495..81559 +
1690962805.394742-CDS-F-serratus_M_contig1357:81494..815591690962805.394742-CDS-F-serratus_M_contig1357:81494..81559Fucus serratus maleCDSF-serratus_M_contig1357 81495..81559 +
1622929338.8234682-CDS-F-serratus_M_contig1357:84003..841561622929338.8234682-CDS-F-serratus_M_contig1357:84003..84156Fucus serratus maleCDSF-serratus_M_contig1357 84004..84156 +
1690962805.4048085-CDS-F-serratus_M_contig1357:84003..841561690962805.4048085-CDS-F-serratus_M_contig1357:84003..84156Fucus serratus maleCDSF-serratus_M_contig1357 84004..84156 +
1622929338.8432431-CDS-F-serratus_M_contig1357:84544..851321622929338.8432431-CDS-F-serratus_M_contig1357:84544..85132Fucus serratus maleCDSF-serratus_M_contig1357 84545..85132 +
1690962805.420504-CDS-F-serratus_M_contig1357:84544..851321690962805.420504-CDS-F-serratus_M_contig1357:84544..85132Fucus serratus maleCDSF-serratus_M_contig1357 84545..85132 +
1622929338.878485-CDS-F-serratus_M_contig1357:85173..852031622929338.878485-CDS-F-serratus_M_contig1357:85173..85203Fucus serratus maleCDSF-serratus_M_contig1357 85174..85203 +
1690962805.437867-CDS-F-serratus_M_contig1357:85173..852031690962805.437867-CDS-F-serratus_M_contig1357:85173..85203Fucus serratus maleCDSF-serratus_M_contig1357 85174..85203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1357.2639.1

>prot_F-serratus_M_contig1357.2639.1 ID=prot_F-serratus_M_contig1357.2639.1|Name=mRNA_F-serratus_M_contig1357.2639.1|organism=Fucus serratus male|type=polypeptide|length=448bp
MPRTEFGRKNLGYMYAIHHGAKVIYDIDSDSTLIRPKDKIPYTDPLNMYA
ASSLTPAFAADPPPSVVHNPYPCFGGPRNAWPRGFPLDAIDGDPGPSRCE
IGIADGAKTGRREKKRKIVPLGVVQSLANHDPDVDSVYRMSILPGTGEMP
FDFEGFPAKAGSVAAGKGRGGGVGSDLRIVPATAFSPYNAQATLHFYPAF
WGMLLPVTVNERVGDIWRGYFTQALLPATRAVVAFAPPWVKQDRSHRNRL
AEFRAELPLYQQSGALVAYLAEYRRRLQAIDDATRGNASATLIPERLQAL
AIAMYERGVLGRKDVALTQAWLQDLVSAGYVFELPKVLLVGAVGGGQNVR
HDDGKAAVEAPRPQGNTDSSGHQGLLSSNAQEALDSAEEETRQEEAAVED
GLATGDDGGTSDLVEKNKKQETMPSQEGARQDPSGTTERDGPTYSRS*
back to top

mRNA from alignment at F-serratus_M_contig1357:75164..86034+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1357.2639.1 ID=mRNA_F-serratus_M_contig1357.2639.1|Name=mRNA_F-serratus_M_contig1357.2639.1|organism=Fucus serratus male|type=mRNA|length=10871bp|location=Sequence derived from alignment at F-serratus_M_contig1357:75164..86034+ (Fucus serratus male)
CCGGCAACAACCACCGTCATCTCAGCCGGGGAAGCGGTACCAGGTGTCGT
TCGTTGCTGTAGCATTGGGTTGAGTTTGGTGCTATGGCGCCTCCTAGAAG
GGGAGAGAGTGGTCTGGAAGTACATACAGCTCGTTCAGAGCGAGTGAGGG
TTGTAGCTCGCGCGCGTGGCCGACCAACTTTTATCCGCTGCTACTACGAG
TAATGCGTAATGATACTAGAAATAATTTGTATTGTAACAAATGGCTGAAA
TATATATAATTGTAAGCGTATTATTAGTAATGGATATCATATAGTCCTGG
AAGGGATGTATGGCATCTATAATAACTAGGTTAACGTCGTTGCAGTATGT
TTTGGGAAAAGCGCGATGCATGCCTACGTACCACGTAGTAGATGAGAGCG
GGAACCTGAGATAAGCGTGCGCGGCTATGGAACACCTTAGAAACTGACGA
GAAAAAAGCGGAATCAGACGGGGCAGTAGCGGGGAACAATAAAAAATGGG
CAGACGCCAGAAAACGGTATACCTCCATGGTTCCGCGCCAAAAAGGGGTA
CACATGAATACACCGTGACATTTGAGCCTCGCTCGCGACGCTGATTGGTC
AACTAAGCCTCGTACCGCTTTTTGACTCCATCCTCTGGCAGTGCACTCTT
TCGAGGCTTCTCAGGTCGACTCGTACCGTTTTTTGTCATGGGGATGCACC
GAATTCTGGCGGGGTCAGAGCACCCCCAGCGGAACATTTACAAGGCCGTT
CGCTTCAAAAAGAAGTTGGAAGAAATGAGATTTCACCCTGCAACCAACGC
ATGTCTCCGCCATGTCTCCGTCACGTCACAGACATAAAAACTCAGATCTT
CTCGTTTTGCACAGCAGATAGAAAGATCTCCTTGCCCTTTCGGTCAGATG
ACACGGCCAGATGAGTAAGCACCAGATTAGTAGCATGCTAGATTCAGTCT
GAGTGTGGAGAGTGAGCGGGCTGACACGGGACAGGTCGGCCGAACCTATC
TCGCGAGACCAAATTCTCAGGCGCAAACAAGGACAGGGAAAAATTCATTA
ACAATCATGTTGAGCTGACCACGAGCAGAACTGAAAAGGGAACCTTACCA
GGTTGATACATCCTCTGCTGTAAGTAATGAACATACAGTACGTGAGGTTA
GGGTGGTATTTCAGTGGTGATATTATCGTATCCTATGGTCATAAAACACG
AGGAATAAGGGAGGCTCGCGCCCCCGCTTGTACAGCATATCAAGCATATG
AAGCTATCAAGATATCAAGCAAAGAGGCTTAATGTTATTATTGGTTGACA
AGAGGCTCATAGCAGTGCGGTTGGCGTGCTTTTCGGCAAGTTACGAGAGA
ATAGTCCATACCATTACAAATATCAGTGCTGTTCGGGTAACAAACGGGCA
CAAGTACGGCCGACAGTCAGCGCTGCGAGACTTTGCGGTCACGAGGCAGC
TCGATTGCATACAATGGAGAGCCCCTTGGCCATGAAACAACGCTCGGAGC
TCGAGTAGACATTATATTTGATTGTGATGAAGCCCAGAAAGACTTGGGGT
GGTTGGTTTGTCGCCATCACGACGGGGTGGGTGCAGGTGTGTTGTGTTTA
CTTGCGACAGGGTGGTTGTAGCTTTGAGGCCAACGGGACTGTCACTCTTT
CAAGCGGGTCGAGAGATCGAGAGATCGAGAGGGCCGTGTCATCTGACCAA
AAGGGCAAGGAGATCTTTCATATCTGCTGTGCAAAAAGAGAAGATCTGAG
TTTTATGTCTGTGACGTGACGGAGACATGGCGGAGACATGCGTTGGTTGT
GGGGTGAAATTTCATTTCTTCCAACTTCTTTTTGAAACGATCGGCCTTGT
AAATGTTCCGCTAGGGGTGCTCTGACCCCGCCAGAACTCGGTGCACCCCC
ATGACAAAAAACGGTACGAGTCGACCTGAGAAGCCTCGAAAGAGTGTACT
GCCAGAGAATGGTGTCAAAAAGCGGTACGAGGCTTAGTTGACCAATCAGC
GTCGCGAGCGAGGCTCAAATGTCAAGGTGTACTCATGTGTACCCCTTTGT
GGCGCAGAACCATGGCGGTATACCGTTTTCTGGCGTCTGCCCATAAAAAA
TACTCCGGAGTACATACTGCTAAACACATGTAGAGAGAGCTAGCTACCTT
AAACAGATACAGATAATATCTACCTGTTGTATATAGAGATATGAGAAAAA
GAAGGTAAAAAAAAAAACTGCAGTTGTTAGCTATACAAGCCAGACGGTTT
ATGTCACCGCGAGCCATCATTACCCATCATCCATCAGAGGGACCGTTACG
ATCTAATGCCCACCACGTGACGAAAAAAATCGGTCGAGGAGATCCCGATG
GTGCGGTTCGTCCTTGAAGAAATTCGAAAACACTTGATGGTCTGGAACAG
AACAGCCTCTCCTCCCACGCAATATAATAATAGACTAATAATAAAAATAT
AACGGACAAGATCTCGGCGAATTCTGGTGAGAGCTCATTCATTCCAACAT
CGCCAATACATGGGGTACAAACCTCCCTCCCCAAACCGAGAGAAACACCA
TCATCCTTGCCTTTTTTTTTGCACAGTTCCACGGCTGCTTGTATCCGGGA
ACGCTGCCGGCGCTAGTCGAGACACGTACGTACGACGGAGACAGATTGAA
CTTCGCAGAGATCATCTCTGGCGAGGACCGGGGGGGATTCGAGGCACCAA
AAGAATCGCAGCTTTGCGAGCGGTGGGCTGTGCTGAGCTCAGTGACTTCG
GCTCACGGGGAGTCAAACATTACGGCGCAGTTGTCATCGCTGGAGGGCTG
GTGCGTGGTTATCGTGGGCGACACTAGGCAGGGTGAGCACCGAGGGCTTA
CAAAAAAAAGCACCACGTCGCCGATCCTTTATTATGCCTACGTGCGAGCT
CTTAGCTTCATCCACAGGGGGTGGGTGCAGACAGACAACAATTCTGCCTG
CTTGCAGTGCGCCGTTTGTTTGTCCCTCTTCTCCCTCGACCCCGGAACCT
CCAAAACTAGAGCTCCCTCTTTCTATAAGAAATTGGGTACATTTTCTCTG
TAAATTACAATATAATATACAAATATATCGCTCAAACAACAACAACACTG
GGAGCAGCGGGCGTCCGGTAGAGATTCACCTTCAGGGCTTTTGGACTTAT
TGGATCTTCTAATCCAAAAGCACCAAGGGAAACCCGGCTCGAGCGGTCAG
AAATGGGGAAGAAAAGGAGCGACACTGGGGGAGTCGATTAGGCCAGGAGC
TAAAAACAAGTCCCGTCATTTGATGCATGTCGAGATTCAACGATAGACCA
AGACTGCTGCACGAAACAGCGCACAGCTAACTAGACGTACTGCATTAtAT
TATTATTGTTCGCCGCCCCCCCGCCCGACTACATATAAAAATAAAAATCA
GGCGACCATGAAGATCACGACGCGCCTCGCAGAGTGAGAAAACTCTCTAC
CGTGGACCAGGATTCGTTACCCTACGGCATAGCGAGCCTTATGCCAAGGA
CCGAGTTCGGCCGCAAGAACCTGGGTTACATGTACGCGATACATCACGGC
GCAAAGGCAAGCAAGCCCCGCCAAAGGGTCGTGGGGGGGGGGGTGGTAGT
TCCCTTGATATCCCCCTGGGGATGACGCAGTGTTTTAGCGGCGCAGCGAT
GCCGTCGTTAATGAAATTCCAGCTTTTGAGGGGGCTTTCAGCGACTTGTA
TGTATGTATGTATGTATGTACGTATTGTCCCACATATAGCAAGAGTATGG
ATCAACCTGGTGAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAA
AAGCATATCCCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCTCGCAAGA
TGGTTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGG
CTGAATCTTGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGACTTGTG
TGGGTAGCTGATCGGGAAAGCCGACATGACAAAAATAATACACAGCAATG
GCTTGGCTGCCAACCGCGTGTGGCCCTGCGTGTTTGCCGGCTCACCGAGC
GACAGTCTTTCTTCCTTGGTCACAACTGTGACATACTATATAGTTAACTA
ATCCTAATTACCCACTTCATACCAATAGTGGGTGTGGGAAAAGAGAGGCG
CACATTAATTGGTCATAGTCCATGGTAACCGCCAAAATGGCAGCACCTGT
TACTGGAACTACCTTGAGGACTACTGGCCTGTGCCGGTGGACTCTTGGCA
GTGAACGCCATCGGTACGCATTTGTGTGACCCGATAAACTCGGGACTGAC
CCGATGGCGTATGGCGGTTTTAAAGAAATAAATGGACGCCCCCGCGGAAG
TCGGGAGGAACCCCGTGAGTAAGCACCAGATTCAGTCTGAGTGTGGAGAT
GAGCAGACTGGCGCGGGGCGGGACGGCTGAACCCGTCTCGCGAGACCAAA
CTCTCACGCATGTAGGGGGACAGGGGGATATTCATTTTCCCGGCTCAGCT
AACCACGAGCAGGATTGGCAACCTACCCGGTTGATCCATACTATCACTTT
TATTAATACGTGGAAAATCTTTGTCTTGGGCGCGTGCTCTTCGCGGCACA
ACAGGTGATCTACGACATCGATTCAGACAGCACCCTTATACGCCCCAAGG
ACAAGATTCCCTACACCGATCCCCTAAACATGTACGCCGCATCGTCTCTG
ACACCTGCTTTTGCGGCAGGCAAGTGGATCGGGACATCGATATTGGGGTA
GGGAGGGGGGGGGGGGTGACGAATATGTCCCTGATTTCAGAGGCGGGGAG
GATTTGAAACAACACCTGCCAGATATGGGTGTTATCCACCCCCGCTTCAT
CTAAATTAAGAAGGTTGTAAATTCCGAACACTATTATTCGTGATACAATG
TGTCCCCGGCAAGACCTGTTTTGGTAAAGCTGGCCCCCTGTATGCGGCAA
ACACACACACACACTGGGGGGGGCGAGAAGTAACCCCCAGGTGGGTTACA
TGCAGTAGCATAGAATGAGTAGACTACATGGCCGGATTGCGCGGTTAGGT
GCAATTTAATAAACACACACACACACACACACACACACACATCACGAACA
CCGGATGGGAACGGGGACGGATGTGAGGTCAGTAGCGGAGATGGGAACGG
GGACGGATGTGAGGTCAGTAGCGGAGATGGGAACGGGGACGAGGGGAACG
GGAACGGGAACGAGGGTAGGATCGGGGAGGGCGGAAGAGAGGCTAAGAAG
CGCAAGAAACCGCTAAATAGTTATAGACGCCAAGGGGAAAACGGGGGAGA
CTTTGGTGGAAAGAGGAAAAGATGTAGAGAAGAAAGGGTCGGTCCAGTAG
CTGCCAACTCAGATAATGTAGAGAGTAACAAGGAAGCAGGGGGGGGCACA
AGGAACTCTGGGCTTAAGTAAGAATTGTACAAGTAGAGAGAGTGTGTCTC
CTTTGTCGCGTCTGATCAGTGGTTTTCGTAATAAGTATCATTGATCCCCC
CTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGTCG
GATTGCGCGGTTATGTGCAATTTAATAAATACACACACACACACAGTTCT
CATGCATGCAGATTTTTAGCCAAGAATACTGCCACGAAACGTAACAGCCG
AATGGGTTCCACGCAGTGGCATATAATGACTAGGATGACAGGGCCGGATT
GCGCGGTTATGTGCAACTTAATAAATACACACACACGCACACATATCGTC
AGAGGTTTTCGTACATCGATCCTCCCTTGGGAGGAAATACACACACACAC
ACACACACACAGTATCATTGATCCCCCCTCGGTAGGATCAATGCGAGTGG
CATAGAATGACTAGGATGAAAGGGCCGGATTGCGTGGTTATGTGCAATTT
AATAAAAATACACACACACACACACACACACGCACACACACACACACACT
CACACCTACCCCCTAAACCATGTCTGCCACTGAATGACCCAGACCCGCCA
CCGAGCGTCGTCCACAATCCGTATCCTTGCTTCGGTGGTCCCCGCAATGC
GTGGCCGAGAGGCTTCCCTCTCGACGCGATCGACGGCGATCCTGGCCCCT
CTCGCTGCGAGATTGGAATCGCCGACGGGGCGAAGACAGGGCGTCGGGAG
AAGAAAAGGAAGATCGTCCCACTCGGCGTCGTGCAGTCTCTTGCGAACCA
CGATCCCGACGTGGACTCGGTCTACAGAATGTCAATTCTTCCCGGGACGG
GAGAAATGCCGTTCGACTTCGAGGGCTTTCCAGCAAAGGCGGGGAGCGTC
GCCGCAGGAAAGGGAAGAGGCGGTGGAAGAGGCGGTGGCGTTGGCAGCGA
CCTTAGGATCGTTCCTGCCACGGCGTTTTCTCCCTACAACGCGCAGGCGA
GGTCTTGGCAAAGGGGTTGTAGGGGGAGGGGGGAGGGCTTCTGCTAGGTA
ATCTCTGCCCGAGTTCAGGGGAACAGTAGTATCAAGGCAGGCCCTCCAAT
CGTGGTAACAGTTCTTAGAGATACAATCGTGAGCTGAACGGTCTTCGCAA
AGGCCATCGGGTGCGAGGGTCCATTTTGACACCATTGTCCCTTTCCCTGA
CCGGACGGATTTGAAACATCTCTGATCCACCAATCCCTTTGGCTAAGGCC
GTGTCTTGCCCATTTTGTCAATTGTTAAACAAAAAATTGTGTCCAATAAA
GGAGCACATATTATATATATATATATATATATATATAATTTGAAAATTCG
AATAAGGCGGATACTCTTCGCAGGCAGGGGTAAACAGGAAGTATAAATTA
AAACCTTACGACGAAAAAATAAAAATGCCCCGCCGGGAATGCGTTCAGAA
TAATAATAAAAACCACCCCCAAAAAAACAGAAAGCATCGAACGCACGAGG
CACGCAAGACACAAACCCCAAGCGAGATCATCGATGATGAGCGCTCGTTC
GTCCTGTCTTGCAAAGCTGTACGACGAACGTTCAACTGTTACAAGATCTT
GCCAGCGCGTTCATTTTTACGACTAGCTCCAGGCGATGGCGACGGCGAAC
AGCGTGTCGACAGCGCAGTTCGTGTCTTGTTATATATTATACTAGGGAGT
ACACAGTTTGTTCTTTTTGGGGGCGGGGGGGGGGGGGGGGGCAGCTTCTT
CAGCACAAACACTCGAATTTGTGAGCCGCGGAGTCGATACAATCGAGACA
CGGCAATTTTTTGCTCTTTTCAGGGGGGGGAGGGGACCAAATTCTCAGGC
GCGAATACGGACAGGGAAATATTGATGTTCCCTGTTCAGCTGACGACGTG
CAGGATTGGCAAACTTACCCGATCGATCCATGCTCTTGCTATATGTATGA
CCATTACATACATACCTGTTACATATATATAACGTCGGCCGAGGAGCACG
CAGGCATTCTCGTTAAGGCTCTGAGTAGGGAGTAGGGTCAATATCCAGTC
GCAATGATAGCCTCGGCATTCAAAGAATATGTTATAAAAGTGTTTGGGGT
AGGTGGGGGGGGGGTACGAGGCACCACAAGCACAGAATAGTTCATTCGTT
GTTGTCAGTTGTTGCTATTGGGCGGGGATTCTGAATCAAATCTCCTTAGC
GCCAGCGGTGGTAGGAACAAGCGGCAAAACGTCAAACTCGTCGTTTGCTC
AGTAACATCAAACGTTCAGGCTGATATCTTGTATGAATTGGCGAAAAAGC
AACGGAGAGTAAGCACTTTTTTCAACAACCTCTTGTCTGCAATTCGACGC
CCTGCTGCCTTCGTCTCAAACGCGATCTGGACCCTGGTTCAGGTTCAGAG
AGTAATGCGGACTACGAGCACACTAGCTTCCCTTGAGTACCACCCGAGCG
TACAACGCGCGTTTATATTTACAATTTTATTTTGTCGGTCGGGGTTGATA
ATAATGGGGATCGTCACCCACAAAAACAAAAACAGAAAGTCGAAAGCGAT
CAAATAAAAATGCGCGTTATCCAAAAAGCGACACGTAATATTACTCTGCG
CGTAGTTTTGCACAGAGTAGTTTGAATCCTACGCATAACATACCGTATTT
TTTTAAGAAAGGTTAAGAACGACTCGGCCTGGATAACTCCAGAAGAGGCT
ACAGTGTAGGGACCAAAATGCGTAGTAACGCCTCCTTCTGTAGCTAGCTC
CCCTCCCCGTCGAGAGCAAGGACACAGAAATCATTGGAGCTGGCTACTTA
CTCGTGAGCGATCGGTGTGGTGAGGGAAGAGAGCAGGCTTCGACCCCAGC
TGAAGACATGGGCTCGCACGGGCCACGGGCCACAGTCGGTCCGATTGTTC
GGCGCTTTGTAGCCTATCGGGTTATCTACTTCGTTAAATCAACGGCGAGG
GAAAGTGGGGCAGGAATCTTACAAGCCCATCCAGAACTCGAACTTTTGGG
GGGCACCATGTCTCAAAACCGTCGTCCCTCCCGGGGACAGGGCTGCCAGC
CCTCGTAATTTGAAGCACCGATCAGTTGTTTAAAGCCGAGGGTGTATTGA
AAACACCCCCTTAAAAATACATTAAAGAATACTCGGAGTCTTGGCACGCC
CCCTAGACTGATTTTCCAGGCTCAATTTCTCCACAACCAAGAGGGTTATA
AAGTGTCAATGCCGAAAATATGGATTTTAGAAAGATCTCGTCGAGAACTT
TCTTCAGACGTATCGGTCGGTATTCACATTCTCTTGTTTGTGGAGAAATT
GAGCCTGGAAAGTGAGTCTACGGGGGTGCCAAGACTCTGATACCTACGGT
ATATTTGTACCCTCCCATCACTCGAAGTCTTCCTTGTACCGCTCTGTGTA
AAAACAATACCAGTAACTATTCGTACCACGGATGAATCAGGCCACTCTCC
ACTTCTACCCTGCCTTCTGGGGGATGCTGTTACCGGTAACGGTCAACGAG
CGAGTCGGCGACATCTGGCGCGGCTACTTCACACAAGCGTTGCTTCCCGC
GACTCGGGCAGTGGTCGCCTTCGCCCCTCCGTGGGTGAAGCAGGCAAGAG
AGGTCCATCGGGGGGCAAGAGTAGTGTCAGGGGATGATGGAGGGTGAACC
TTGGACGGGTCGGAAGTGGAGGATAACTTCTACTTTCATATGTATAATAT
TCTGAGGAGGCAGTATTACTTATTGGCTGGTAATATGGAGATTACGTCGC
CATCATCTTGAGGACGTGCTGAGGCTGTTGCGAGCGTATATACTTTTGTC
TAAATCCACTGCCCACCACCACACCTAGCCTAGCCCGTGATCCTTCGTTG
CCGCTGGATATCAAACACAAGTCACAAAGTGTACTAGGAGAGGGGGGGGG
GGGCATCAAAAAATGTTCGGATGAGAATGAAGCCGTCGCCCCGTCCCGAT
GTTTTTGCTCGTGCGCTCGCGCGCGCTGCAGGATAGATCCCACCGCAATC
GCCTCGCCGAGTTCCGCGCCGAGCTTCCCCTTTACCAACAAAGCGGGGCC
CTGGTCGCCTACCTTGCGGAGTACCGGCGGCGACTACAGGCAATCGACGA
CGCTACGCGGGGCAATGCTTCCGCCACTCTGATCCCGGAGCGACTTCAGG
CGCTGGCGATCGCCATGTACGAGCGTGGAGTCCTGGGAAGGAAGGATGTA
GCCCTCACGCAGGCGTGGCTGCAGGACCTCGTATCTGCAGGCTACGTTTT
CGAGCTTCCCAAGGTCCTTCTCGTTGGGGCGGTGGGAGGGGGGCAAAACG
TCCGTCACGATGACGGCAAAGCTGCGGTGGAGGCGCCACGGCCTCAAGGT
AACACGGATTCGAGCGGACATCAAGGGTTGCTCTCATCGAACGCGCAGGA
GGCTCTCGATTCTGCTGAAGAAGAGACTCGACAGGAAGAAGCTGCGGTGG
AAGATGGTTTGGCGACAGGGGATGACGGTGGAACCTCGGACCTGGTGGAG
AAGAATAAGAAGCAAGAGACTATGCCTTCGCAGGAAGGTGCCCGTCAAGA
TCCTAGTGGGACAACTGAGCGTGAGGAGAACGATGGACCCAGGAGCTTAG
GGACTACTGCCGTGATGGACCCACATATAGCCGATCTTGACGGCGAACAA
CAGCCGCATTTGACAGAGGTGCAACACAGGAGGGGGAATCGTGAAGAGAA
GGAGTGCGTGCGCATGAGGGAAGAGCTTAAGATCATCGCGAATCAGACCT
GGGGCAAAGCCAACAAGCTGCACCAGAGGCGCTGGGCATCTTTGGCTTGC
AACAGCGTGCCAAAAAGGGAGGATAGTGAGCGCCATGCGGTTCGCAGTGC
ATGGGAAGCATCTGAAGCAACGGAAGAAGCAGTGATATCAGCTGCAGCAG
CAAGAGATGGGCGAAATGTTTCGGTGGTACACGAGAAGAAGCCGAGGGGT
GAGGGAATGGCTCCTCGAGAACATGGCCGAGAAACGTCCACGATAGAATC
GATCGTTGTTGAGGTTGGGGTGGATGGCGGCCATACCGCGGGGAGCGGGG
GGAAGGAACTGGGAGGCGGTGAAGATCCAAAGCAAGGGGGGAAAGAGAAG
CCCCCCGCGGCAGGGGTCATTCCACAGACGCCGAACTCTAGGAGCGCCCC
CAAAGCCCAGGTTTTGCTAGTGATCGCAGTTGTTTCCGCTCGGCCGGAGA
GGAGGACGGCCATTCGAGACTCTTGGTTGGCTTGGAGGGACGACCGAGTC
GTGCTCCGCTTCTTTACGGAGCAGCTGGAAGACACCTTCGCTCGGCCGGA
GAACCAGACCGCCGAGGCAAAGGCGCTAGCGGAAGAGTCTTCTGCCCATG
GGGACGTGGTGGTTCTGGGCATCGGTCATGATATGAACTACAGCCTGAAG
CTAGTCTCGGCCATGCGGTACGCGCTCGACCGTTACGACTTCGACTTCTT
CCTCCGACTGGATGACAGTTA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1357:75164..86034+

>mRNA_F-serratus_M_contig1357.2639.1 ID=mRNA_F-serratus_M_contig1357.2639.1|Name=mRNA_F-serratus_M_contig1357.2639.1|organism=Fucus serratus male|type=CDS|length=2688bp|location=Sequence derived from alignment at F-serratus_M_contig1357:75164..86034+ (Fucus serratus male)
ATGCCAAGGACCGAGTTCGGCCGCAAGAACCTGGGTTACATGTACGCGAT
ACATCACGGCGCAAAGATGCCAAGGACCGAGTTCGGCCGCAAGAACCTGG
GTTACATGTACGCGATACATCACGGCGCAAAGGTGATCTACGACATCGAT
TCAGACAGCACCCTTATACGCCCCAAGGACAAGATTCCCTACACCGATCC
CCTAAACATGTACGCCGCATCGTCTCTGACACCTGCTTTTGCGGCAGGTG
ATCTACGACATCGATTCAGACAGCACCCTTATACGCCCCAAGGACAAGAT
TCCCTACACCGATCCCCTAAACATGTACGCCGCATCGTCTCTGACACCTG
CTTTTGCGGCAGACCCGCCACCGAGCGTCGTCCACAATCCGTATCCTTGC
TTCGGTGGTCCCCGCAATGCGTGGCCGAGAGGCTTCCCTCTCGACGCGAT
CGACGGCGATCCTGGCCCCTCTCGCTGCGAGATTGGAATCGCCGACGGGG
CGAAGACAGGGCGTCGGGAGAAGAAAAGGAAGATCGTCCCACTCGGCGTC
GTGCAGTCTCTTGCGAACCACGATCCCGACGTGGACTCGGTCTACAGAAT
GTCAATTCTTCCCGGGACGGGAGAAATGCCGTTCGACTTCGAGGGCTTTC
CAGCAAAGGCGGGGAGCGTCGCCGCAGGAAAGGGAAGAGACCCGCCACCG
AGCGTCGTCCACAATCCGTATCCTTGCTTCGGTGGTCCCCGCAATGCGTG
GCCGAGAGGCTTCCCTCTCGACGCGATCGACGGCGATCCTGGCCCCTCTC
GCTGCGAGATTGGAATCGCCGACGGGGCGAAGACAGGGCGTCGGGAGAAG
AAAAGGAAGATCGTCCCACTCGGCGTCGTGCAGTCTCTTGCGAACCACGA
TCCCGACGTGGACTCGGTCTACAGAATGTCAATTCTTCCCGGGACGGGAG
AAATGCCGTTCGACTTCGAGGGCTTTCCAGCAAAGGCGGGGAGCGTCGCC
GCAGGAAAGGGAAGAGGCGGTGGCGTTGGCAGCGACCTTAGGATCGTTCC
TGCCACGGCGTTTTCTCCCTACAACGCGCAGGCGGTGGCGTTGGCAGCGA
CCTTAGGATCGTTCCTGCCACGGCGTTTTCTCCCTACAACGCGCAGGCCA
CTCTCCACTTCTACCCTGCCTTCTGGGGGATGCTGTTACCGGTAACGGTC
AACGAGCGAGTCGGCGACATCTGGCGCGGCTACTTCACACAAGCGTTGCT
TCCCGCGACTCGGGCAGTGGTCGCCTTCGCCCCTCCGTGGGTGAAGCAGG
CCACTCTCCACTTCTACCCTGCCTTCTGGGGGATGCTGTTACCGGTAACG
GTCAACGAGCGAGTCGGCGACATCTGGCGCGGCTACTTCACACAAGCGTT
GCTTCCCGCGACTCGGGCAGTGGTCGCCTTCGCCCCTCCGTGGGTGAAGC
AGGATAGATCCCACCGCAATCGCCTCGCCGAGTTCCGCGCCGAGCTTCCC
CTTTACCAACAAAGCGGGGCCCTGGTCGCCTACCTTGCGGAGTACCGGCG
GCGACTACAGGCAATCGACGACGCTACGCGGGGCAATGCTTCCGCCACTC
TGATCCCGGAGCGACTTCAGGCGCTGGCGATCGCCATGTACGAGCGTGGA
GTCCTGGGAAGGAAGGATGTAGCCCTCACGCAGGCGTGGCTGCAGGACCT
CGTATCTGCAGGCTACGTTTTCGAGCTTCCCAAGGTCCTTCTCGTTGGGG
CGGTGGGAGGGGGGCAAAACGTCCGTCACGATGACGGCAAAGCTGCGGTG
GAGGCGCCACGGCCTCAAGGTAACACGGATTCGAGCGGACATCAAGGGTT
GCTCTCATCGAACGCGCAGGAGGCTCTCGATTCTGCTGAAGAAGAGACTC
GACAGGAAGAAGCTGCGGTGGAAGATGGTTTGGCGACAGGGGATGACGGT
GGAACCTCGGACCTGGTGGAGAAGAATAAGAAGCAAGAGACTATGCCTTC
GCAGGAAGGTGCCCGTCAAGATCCTAGTGGGACAACTGAGGATAGATCCC
ACCGCAATCGCCTCGCCGAGTTCCGCGCCGAGCTTCCCCTTTACCAACAA
AGCGGGGCCCTGGTCGCCTACCTTGCGGAGTACCGGCGGCGACTACAGGC
AATCGACGACGCTACGCGGGGCAATGCTTCCGCCACTCTGATCCCGGAGC
GACTTCAGGCGCTGGCGATCGCCATGTACGAGCGTGGAGTCCTGGGAAGG
AAGGATGTAGCCCTCACGCAGGCGTGGCTGCAGGACCTCGTATCTGCAGG
CTACGTTTTCGAGCTTCCCAAGGTCCTTCTCGTTGGGGCGGTGGGAGGGG
GGCAAAACGTCCGTCACGATGACGGCAAAGCTGCGGTGGAGGCGCCACGG
CCTCAAGGTAACACGGATTCGAGCGGACATCAAGGGTTGCTCTCATCGAA
CGCGCAGGAGGCTCTCGATTCTGCTGAAGAAGAGACTCGACAGGAAGAAG
CTGCGGTGGAAGATGGTTTGGCGACAGGGGATGACGGTGGAACCTCGGAC
CTGGTGGAGAAGAATAAGAAGCAAGAGACTATGCCTTCGCAGGAAGGTGC
CCGTCAAGATCCTAGTGGGACAACTGAGCGTGATGGACCCACATATAGCC
GATCTTGACGTGATGGACCCACATATAGCCGATCTTGA
back to top