mRNA_F-serratus_M_contig135.2598.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig135.2598.1
Unique NamemRNA_F-serratus_M_contig135.2598.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A6H5JB94_9PHAE (Casein kinase I n=2 Tax=PX clade TaxID=569578 RepID=A0A6H5JB94_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 5.100e-36
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 111
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BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: D7FMN1_ECTSI (Casein kinase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN1_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 2.200e-35
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ
Sbjct:  155 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 215
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BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A7S3DXS6_9STRA (Casein kinase I (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DXS6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.710e-35
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIP VRWYG+EGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A6S9JPJ1_HETAK (Casein kinase I n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JPJ1_HETAK)

HSP 1 Score: 131 bits (330), Expect = 5.660e-35
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYC RRFNLKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCGRRFNLKTVLMLADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: B8CG56_THAPS (Casein kinase I (Fragment) n=6 Tax=Bacillariophyta TaxID=2836 RepID=B8CG56_THAPS)

HSP 1 Score: 127 bits (318), Expect = 2.160e-34
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIP VRWYG+EGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A7S2W925_9STRA (Casein kinase I n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2W925_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.320e-34
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLM+ADQ
Sbjct:   51 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCGRRFKLKTVLMVADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A1Z5K400_FISSO (Casein kinase I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K400_FISSO)

HSP 1 Score: 127 bits (318), Expect = 1.010e-33
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIP VRWYG+EGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A7S2UNU0_9STRA (Casein kinase I n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNU0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.150e-33
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIP VRWYG+EGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A7S3Q337_9STRA (Casein kinase I n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q337_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.320e-33
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIP VRWYG+EGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQ 111
[Close]
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Match: A0A448ZIK1_9STRA (Casein kinase I n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIK1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.470e-33
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 
Query:    1 YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRFNLKTVLMLADQ 183
            YESKIYRILHGGLGIP VRWYG+EGDYNVMVLDLLGPSLEDLFNYC RRF LKTVLMLADQ
Sbjct:   51 YESKIYRILHGGLGIPNVRWYGIEGDYNVMVLDLLGPSLEDLFNYCGRRFQLKTVLMLADQ 111
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig135.2598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB94_9PHAE5.100e-36100.00Casein kinase I n=2 Tax=PX clade TaxID=569578 RepI... [more]
D7FMN1_ECTSI2.200e-35100.00Casein kinase I n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A7S3DXS6_9STRA3.710e-3593.44Casein kinase I (Fragment) n=1 Tax=Amphiprora palu... [more]
A0A6S9JPJ1_HETAK5.660e-3598.36Casein kinase I n=2 Tax=Heterosigma akashiwo TaxID... [more]
B8CG56_THAPS2.160e-3493.44Casein kinase I (Fragment) n=6 Tax=Bacillariophyta... [more]
A0A7S2W925_9STRA4.320e-3495.08Casein kinase I n=3 Tax=Ochrophyta TaxID=2696291 R... [more]
A0A1Z5K400_FISSO1.010e-3393.44Casein kinase I n=2 Tax=Fistulifera solaris TaxID=... [more]
A0A7S2UNU0_9STRA1.150e-3393.44Casein kinase I n=1 Tax=Attheya septentrionalis Ta... [more]
A0A7S3Q337_9STRA1.320e-3393.44Casein kinase I n=1 Tax=Chaetoceros debilis TaxID=... [more]
A0A448ZIK1_9STRA1.470e-3393.44Casein kinase I n=1 Tax=Pseudo-nitzschia multistri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig135contigF-serratus_M_contig135:4..490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score134.4
Seed ortholog evalue1.8e-29
Seed eggNOG ortholog2880.D7FMN1
Preferred namehhp1
KEGG koko:K02218,ko:K08959,ko:K14758
KEGG Pathwayko03008,ko04011,ko04340,ko04390,ko04392,ko04540,ko04710,map03008,map04011,map04340,map04390,map04392,map04540,map04710
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000045,GO:0000166,GO:0000228,GO:0000280,GO:0000407,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004713,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005794,GO:0005815,GO:0005816,GO:0005829,GO:0005856,GO:0005886,GO:0005933,GO:0005934,GO:0005935,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006906,GO:0006914,GO:0006950,GO:0006974,GO:0006996,GO:0007033,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008360,GO:0008608,GO:0009056,GO:0009451,GO:0009893,GO:0009987,GO:0010467,GO:0010520,GO:0010564,GO:0010604,GO:0010638,GO:0010845,GO:0012505,GO:0015630,GO:0016020,GO:0016043,GO:0016050,GO:0016070,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018108,GO:0018193,GO:0018209,GO:0018212,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022613,GO:0023052,GO:0030100,GO:0030242,GO:0030427,GO:0030554,GO:0030999,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032386,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033551,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0036211,GO:0038083,GO:0040020,GO:0042254,GO:0042273,GO:0042274,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045132,GO:0045143,GO:0045787,GO:0045807,GO:0045836,GO:0045911,GO:0045935,GO:0046483,GO:0046777,GO:0048193,GO:0048259,GO:0048260,GO:0048280,GO:0048284,GO:0048285,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051276,GO:0051316,GO:0051321,GO:0051445,GO:0051446,GO:0051455,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0060255,GO:0060341,GO:0060627,GO:0060628,GO:0060631,GO:0060903,GO:0061024,GO:0061025,GO:0061919,GO:0061982,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090174,GO:0090304,GO:0097159,GO:0097367,GO:0098657,GO:0098687,GO:0098813,GO:0140013,GO:0140096,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1903046,GO:1903827,GO:1905037,GO:2000241,GO:2000243,GO:2000369,GO:2000370,GO:2001020,GO:2001159
EggNOG free text desc.protein kinase activity
EggNOG OGsKOG1164@1,KOG1164@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009,ko03016,ko03036
Exons2
Model size184
Cds size183
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929332.668069-CDS-F-serratus_M_contig135:3..401622929332.668069-CDS-F-serratus_M_contig135:3..40Fucus serratus maleCDSF-serratus_M_contig135 4..40 +
1690962802.332972-CDS-F-serratus_M_contig135:3..401690962802.332972-CDS-F-serratus_M_contig135:3..40Fucus serratus maleCDSF-serratus_M_contig135 4..40 +
1622929332.684975-CDS-F-serratus_M_contig135:344..4901622929332.684975-CDS-F-serratus_M_contig135:344..490Fucus serratus maleCDSF-serratus_M_contig135 345..490 +
1690962802.3534245-CDS-F-serratus_M_contig135:344..4901690962802.3534245-CDS-F-serratus_M_contig135:344..490Fucus serratus maleCDSF-serratus_M_contig135 345..490 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig135.2598.1prot_F-serratus_M_contig135.2598.1Fucus serratus malepolypeptideF-serratus_M_contig135 4..490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig135.2598.1

>prot_F-serratus_M_contig135.2598.1 ID=prot_F-serratus_M_contig135.2598.1|Name=mRNA_F-serratus_M_contig135.2598.1|organism=Fucus serratus male|type=polypeptide|length=61bp
YESKIYRILHGGLGIPTVRWYGVEGDYNVMVLDLLGPSLEDLFNYCSRRF
NLKTVLMLADQ
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mRNA from alignment at F-serratus_M_contig135:4..490+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig135.2598.1 ID=mRNA_F-serratus_M_contig135.2598.1|Name=mRNA_F-serratus_M_contig135.2598.1|organism=Fucus serratus male|type=mRNA|length=487bp|location=Sequence derived from alignment at F-serratus_M_contig135:4..490+ (Fucus serratus male)
TACGAGTCCAAGATATACCGCATCTTACACGGCGGATGTGCGTTGGTTCA
ACCGTTGCCGACAAACAGAGAGTCCCAAAGGTCCTTTCCTATATCGCAAG
CGGGGAGGGGAGGAAGGCGTGGGTGCTGGGGCTTCGATGGCGTAATTTAT
AACTCTGGAGGCGTTTTCCTTACGGTGGGGTTATATTCGTGAGCGGTGAA
ACGTAAGCGAAAAAGCGTGCCCGTATGGAGCCATTGGGATGGCACGGAGG
TGTTATGAATGCCGTATCTACCTTGTGCCATGATAACAAACGCCTGCTTG
GGGTTTCCACCCTCTCTTGTTCGTCTTCCTGCATTTCTCAGTGGGTATCC
CTACGGTTCGATGGTACGGGGTGGAGGGTGACTACAACGTAATGGTGCTG
GATTTGTTGGGGCCATCGCTGGAGGATCTTTTCAATTACTGCAGCCGGAG
GTTCAACCTCAAGACCGTGCTCATGCTTGCGGATCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig135:4..490+

>mRNA_F-serratus_M_contig135.2598.1 ID=mRNA_F-serratus_M_contig135.2598.1|Name=mRNA_F-serratus_M_contig135.2598.1|organism=Fucus serratus male|type=CDS|length=366bp|location=Sequence derived from alignment at F-serratus_M_contig135:4..490+ (Fucus serratus male)
TACGAGTCCAAGATATACCGCATCTTACACGGCGGATTACGAGTCCAAGA
TATACCGCATCTTACACGGCGGATTGGGTATCCCTACGGTTCGATGGTAC
GGGGTGGAGGGTGACTACAACGTAATGGTGCTGGATTTGTTGGGGCCATC
GCTGGAGGATCTTTTCAATTACTGCAGCCGGAGGTTCAACCTCAAGACCG
TGCTCATGCTTGCGGATCAGTGGGTATCCCTACGGTTCGATGGTACGGGG
TGGAGGGTGACTACAACGTAATGGTGCTGGATTTGTTGGGGCCATCGCTG
GAGGATCTTTTCAATTACTGCAGCCGGAGGTTCAACCTCAAGACCGTGCT
CATGCTTGCGGATCAG
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