mRNA_F-serratus_M_contig1349.2594.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1349.2594.1
Unique NamemRNA_F-serratus_M_contig1349.2594.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: D7FJL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJL1_ECTSI)

HSP 1 Score: 902 bits (2330), Expect = 0.000e+0
Identity = 456/510 (89.41%), Postives = 485/510 (95.10%), Query Frame = 3 
Query:  696 ERVVKLGFFSEMKFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQFSH 2225
            +++VK GFFS+++F  LPLS  ML AL  L F   TKIQAQAIPPLL G+D+VGAAKTGSGKTLAF++PVLE LHKVKWS+R+GT CIIISPTRELSLQTYGVLRD +E GN+KQT+GLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNT+GFLFRNMQ+LVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSI+NKP+YVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQ+DPPDQ+AEYIHRVGRTARGQSG+GRALLFLLPEE+GFLRYLR AKA LNEY+FPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAY+SHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQ RRKM + G GGH+FSATNPYGQKA GD RQF+H
Sbjct:  136 QQLVKTGFFSDVEFSTLPLSSGMLSALAKLNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIRNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKM-AVGGGGHSFSATNPYGQKAPGDRRQFTH 644
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: A0A835ZG10_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG10_9STRA)

HSP 1 Score: 803 bits (2074), Expect = 3.440e-282
Identity = 408/507 (80.47%), Postives = 449/507 (88.56%), Query Frame = 3 
Query:  708 KLGFFSEMKFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAG--NMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQFS 2222
            K GFFSE +F  LPLS     AL  L F TMTKIQAQAIPPLL GQDLVGAAKTGSGKTLAF++PVLE+L KV W  R GT C++ISPTRELSLQTYGVLRD  EAG    + T+GLLIGGANRRAEAERL+KGV +LVVTPGRLLDHLQNT+GF+F NMQ+LVIDEADRILEQGFEEEMHQIIK+LP+ERQTMLFSATQTKKVEDLARLSI++KPIYVGVDDAEQESTV+GLEQGYVVCPS+KRFLLLFTFLKKNR KK+MVFFSSCNSV +H+ELLNYIDIPVM+IHGRQKQQKRTT+FFQFC+Q+TG+LLCTDVAARGLDIPAVDWIIQYDPPDQ+AEYIHRVGRTARG +G GRALLFLLP+E+GFLRYLRAAK TLNEY+FP  KVANVQSQLSRL+EKNYYLNKSAR+AYRSYLLAYASHSLK +Y+VHELDLQAVA+AFGFTVPPRVDL LSA+G KGR             G + S GHAFSA+NPYG+K  GD RQFS
Sbjct:  196 KKGFFSEERFDSLPLSAGTQAALKDLNFVTMTKIQAQAIPPLLSGQDLVGAAKTGSGKTLAFLLPVLEMLEKVMWGGRQGTACVVISPTRELSLQTYGVLRDLCEAGAGGGRHTHGLLIGGANRRAEAERLMKGVAILVVTPGRLLDHLQNTKGFVFHNMQMLVIDEADRILEQGFEEEMHQIIKILPRERQTMLFSATQTKKVEDLARLSIRDKPIYVGVDDAEQESTVEGLEQGYVVCPSEKRFLLLFTFLKKNRNKKVMVFFSSCNSVNYHAELLNYIDIPVMNIHGRQKQQKRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDQTAEYIHRVGRTARGSTGAGRALLFLLPQEVGFLRYLRAAKVTLNEYEFPAHKVANVQSQLSRLVEKNYYLNKSARDAYRSYLLAYASHSLKTLYNVHELDLQAVAKAFGFTVPPRVDLNLSAKGAKGR-------VKTVNKGKRDSSGHAFSASNPYGKKKDGDRRQFS 695
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA)

HSP 1 Score: 733 bits (1893), Expect = 4.920e-257
Identity = 373/509 (73.28%), Postives = 431/509 (84.68%), Query Frame = 3 
Query:  696 ERVVKLGFFSEMKFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRG-GGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQF 2219
            E+  + GFFS+  F  L LSE    AL    +  MTKIQA++IPPLL G+DL+GAAKTGSGKTLAF++P +ELL +V+++ R+GTG I+ISPTREL+LQ YGVLR+  E  N  QT+GL+IGGANRR EAE+L KGVN+LV TPGRLLDHLQNTRGF FRN+Q+LVIDEADRILEQGFEE+MH IIK LPK RQT+LFSATQT+KVEDLARLSI+  P+YVGVDD ++ STV GLEQGYVVCPS  RFLLLFTFLKKNRK+K+MVFFSSCN+VK+H+ELLNYID+PVMDIHGRQKQQ+RT++FFQFCK DTG+LLCTDVAARGLDIPAVDWI+QYDPPDQ AEYIHRVGRTARG SG GRALLFL PEE+GFLRYLR AK  LNEY+FP  KVANVQ+QL RL+E+NYYLNKSAREAYRSYLLAYASH+ KDI++VH LDL A A++FGFTVPPRVDL  SARG + R    K  D+ +R+  S    GHAFSA NPYGQ+AKGD RQF
Sbjct:   47 EKKHRPGFFSKAAFSSLDLSEGTARALAENGYERMTKIQAKSIPPLLTGKDLLGAAKTGSGKTLAFLVPAVELLSRVRFTTRNGTGVIVISPTRELALQIYGVLRELCEHHN--QTHGLVIGGANRRTEAEKLAKGVNILVATPGRLLDHLQNTRGFNFRNLQMLVIDEADRILEQGFEEDMHAIIKTLPKTRQTVLFSATQTRKVEDLARLSIEGDPVYVGVDDGDRVSTVQGLEQGYVVCPSANRFLLLFTFLKKNRKRKVMVFFSSCNAVKYHAELLNYIDVPVMDIHGRQKQQRRTSTFFQFCKADTGILLCTDVAARGLDIPAVDWIVQYDPPDQPAEYIHRVGRTARGPSGDGRALLFLAPEEVGFLRYLRKAKVALNEYEFPTSKVANVQNQLERLVERNYYLNKSAREAYRSYLLAYASHADKDIFNVHNLDLVATAKSFGFTVPPRVDLNFSARGDRKRARNAKGGDKKKRQKAS----GHAFSADNPYGQRAKGDRRQF 549
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: W7U0G2_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0G2_9STRA)

HSP 1 Score: 738 bits (1904), Expect = 7.840e-256
Identity = 369/502 (73.51%), Postives = 430/502 (85.66%), Query Frame = 3 
Query:  717 FFSEMKFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQFS 2222
            FF+   F DLP+S+    AL  L+F  MT IQ+ AIPPLL G+D+V AAKTGSGKTLAF++PV+ELL KVKW+ R+GTG IIISPTRELS+Q YGVLRD  + G    T+GL++GGANRRAEAERLVKGV++LV TPGRLLDHLQNT+GFL RN+Q+LVIDEADRILEQGFEE+MHQIIK LPK RQTMLFSATQTKKVEDL RLS++ +P++VG  +    +TV GLEQGYVVCPSDKRFLLLFTFLK+N+++KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFC+QD G+LLCTDVAARGLDIPAVDWIIQYDPPD   EYIHRVGRTARG +G+GRALLFL  EE+GFL+YLRAAK  LNEY+FP KKVANVQ+QL++L+EKNYYLNKSAR+AYRSYLLAYASHS KDI++VHELDLQAVARAFGF+VPPRVD+ LS++G KGR     +D+        GS GH FSA NPYG++  GD RQF+
Sbjct:  241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRF------GSTGHKFSANNPYGRREAGDSRQFT 736
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: A0A7S2KTK2_9STRA (RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTK2_9STRA)

HSP 1 Score: 705 bits (1819), Expect = 2.100e-245
Identity = 358/498 (71.89%), Postives = 414/498 (83.13%), Query Frame = 3 
Query:  735 FGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRG-GGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQFSH 2225
            F  LPL++    AL  L F  MT+IQAQ+IP LL G+D+VGAAKTGSGKTLAF+IPV+ELL K K++ R GTG I+ISPTRELSLQ YGVLRD + +G   QT+GL+IGGANR+ EA++L KGVN+L+ TPGRLLDHLQNT  F++ NM  LVIDEADRILEQGFEE+M  I++LLPK+RQTMLFSATQTKKVEDLARLSI++  +YV V    + +T  GLEQG+V CPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQF K  TG LLCTDVAARGLDIP VDWIIQ+DPPD   EYIHRVGRTARG +G GRALLFL PEE GFL+YL+AAK TLNEY+FPV KVANVQSQL  LIEKNYYLN+SAR+AYRSYLLAYASHS KDI++VH++DLQ  A AFGFT PPRVD+  + +G++GR  G ++ D   + M    S GHAFSA+NP+G++ KGD RQFSH
Sbjct:   85 FTALPLTDATQKALAELSFTRMTQIQAQSIPSLLAGKDIVGAAKTGSGKTLAFLIPVIELLFKAKFTTRRGTGAIVISPTRELSLQIYGVLRDLITSGGHNQTHGLIIGGANRKTEADKLGKGVNILIATPGRLLDHLQNTSRFVYHNMLCLVIDEADRILEQGFEEDMRAILRLLPKQRQTMLFSATQTKKVEDLARLSIQSSAVYVEVASETKLATAAGLEQGFVTCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFMKDKTGTLLCTDVAARGLDIPEVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALLFLTPEETGFLKYLQAAKVTLNEYEFPVSKVANVQSQLQNLIEKNYYLNRSARDAYRSYLLAYASHSHKDIFNVHQMDLQGAATAFGFTTPPRVDVAFNVKGERGRKQGNRKHDPKTQGM----SNGHAFSASNPFGERQKGDKRQFSH 578
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: B8BY61_THAPS (RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY61_THAPS)

HSP 1 Score: 698 bits (1802), Expect = 9.010e-244
Identity = 355/500 (71.00%), Postives = 408/500 (81.60%), Query Frame = 3 
Query:  735 FGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKP-IYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQARRKMGSKG--SGGHAFSATNPYGQKAKGDGRQFSH 2225
            F  LPLS+    AL A+ F  MT+IQA +IP LL G+DL+GAAKTGSGKTLAF++PV+ELLH  K+ +R+GTG I+ISPTREL++Q YGV +D   +G   QT GL+IGGANRR EAERL KGVN+++ TPGRLLDHLQNT+GF+FRN+   V+DEADRILEQGFE+++  IIK LPK+RQTMLFSATQTKKVEDLAR +I  K  +YV V +    +T  GLEQGYV  PSD+RFLLLFTFLKKN+ KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFCKQ TG LLCTDVAARGLDIPAVDWIIQ+DPPD   EYIHRVGRTARG+ G+GRALLFL PEE GFLRYL+AAK TLNEY+FP+ K+ANVQSQL RLIEKNYYLN +AR+AYRSYLLAY SHSL+DI+DVH LDL AV RAFGFT PPRVDL  S +G K R   +   Q     G  G  + GH+FSA+NPYG+K  GD RQFSH
Sbjct:   22 FASLPLSDLTQNALSAMGFTRMTQIQAMSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQRQTMLFSATQTKKVEDLARTAIDPKSAVYVEVPNETNLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDIFDVHSLDLAAVGRAFGFTAPPRVDLAFSVKGPKAR---RHNGQVMNGKGKNGKLANGHSFSASNPYGRKESGDKRQFSH 518
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: A0A7S2PMU9_9STRA (RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMU9_9STRA)

HSP 1 Score: 701 bits (1810), Expect = 1.100e-243
Identity = 357/504 (70.83%), Postives = 413/504 (81.94%), Query Frame = 3 
Query:  732 KFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKP-IYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQARRKMGSKG-----SGGHAFSATNPYGQKAKGDGRQFSH 2225
            +F  LPLSE    AL A+ F  MT+IQA +IPPLL G+DL+GAAKTGSGKTLAF++P++ELLH  K+ +R+GTG I+ISPTREL++Q YGV +D   +G  +QT GL++GGANRR EAERL KGVN+++ TPGRLLDHLQNT+GF+FRN+   V+DEADRILEQGFEE++  IIK LPK+RQTMLFSATQTKKVEDLAR +I +K  IYV V +    +T  GLEQGYV  PSD+RFLLLFTFLKKN+ KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFCKQ TG LLCTDVAARGLDIPAVDWIIQ+DPPD   EYIHRVGRTARG  G GRALLFL PEE GFLRYL+ AK TLNEY+FP+KK++NVQSQL RLIEKNYYLN +AR+AYRSYLLAYASHSL+DI++VHELDL AV RAFGFT PPRVDL  S +G K R     R   +   G KG     S GH+FS +NPYG++ +GD RQFSH
Sbjct:  103 RFSTLPLSENTQTALSAMGFTRMTQIQAMSIPPLLAGKDLIGAAKTGSGKTLAFLLPIVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCSSGKHQQTYGLIMGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEEDLRAIIKALPKQRQTMLFSATQTKKVEDLARTAIDHKSAIYVEVPNETSLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDKGTGRALLFLTPEETGFLRYLKVAKVTLNEYEFPMKKLSNVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLAAVGRAFGFTAPPRVDLAFSMKGGKDR-----RHNGQVAKGGKGKTGKLSNGHSFSGSNPYGKRDRGDKRQFSH 601
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: A0A329RG91_9STRA (RNA helicase n=10 Tax=Peronosporaceae TaxID=4777 RepID=A0A329RG91_9STRA)

HSP 1 Score: 696 bits (1797), Expect = 7.930e-242
Identity = 352/511 (68.88%), Postives = 419/511 (82.00%), Query Frame = 3 
Query:  696 ERVVKLGFFSEMKFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQARRKMGSKGS-GGHAFSATNPYGQKAKGDGRQFSH 2225
            E  V   +FS  +F  LPLSEP   AL  + F  MTKIQ+++I PLL GQDL+GAAKTGSGKTL+F+IP +ELLHKV+++ R GTGCI+ISPTREL+LQ YGV+RD  +  +  QT+G+++GGANRRAEAERLVKGVN+L+ TPGRLLDHLQNT+ F++ N+QILVIDEADRIL  GFEEEM QIIK +PKERQTMLFSATQTKKVEDLARLSIK KP+YVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC +VKF+ ELLNYIDIPV+DIHG+QKQ KRTT+FFQFC   TG+LLCTDVAARGLDIPAVDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLP+ELGFL+YL+A+K  LNEY+FPV K+ANV+SQL +L+EK YYL+KSA++AYR YLLAYASHSLK I+DV  LDLQ VA++FG  VPP+V L +   G+ G+  G   D      G K    GHAFSA NPYG++A GD RQF+H
Sbjct:   86 ESTVDERYFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCTAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRASGDKRQFAH 594
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: K3XAF9_GLOUD (RNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAF9_GLOUD)

HSP 1 Score: 697 bits (1798), Expect = 9.210e-242
Identity = 352/519 (67.82%), Postives = 427/519 (82.27%), Query Frame = 3 
Query:  678 SNLQAHERVVKLGFFSEMKFGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGR---GGGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQFSH 2225
            +N  A E  V   +FS  +F  LPLSEP   ALD + F  MTKIQ+++I PLL GQDL+GAAKTGSGKTL+F+IP +ELLHKVK++ R GTGCI+ISPTREL+LQ YGV+R+  +  +  QT+G+++GGANRRAEAERLVKGVN+L+ TPGRLLDHLQNT+ F++ N+QILVIDEADRIL  GFE+EM QIIK +PKERQTMLFSATQTKKVEDLARLSIK KP+YVGV++ + ++TV  LEQGYVV PSDKRFLLLFTFLKKN KKK+MVFFSSC +VKF+ ELLNYIDIPVMDIHG+QKQ KRTT+FFQFC   TG++LCTDVAARGLDIPAVDWIIQ+DPPD   EYIHRVGRTARG  G+G+ALL LLPEELGFL+YL+AAK  LNEY+FP+ K+ANV+SQL +L+EK YYL+KSA++AYR YLLAYASH+LK+I+DV  LDLQAVA++FG  VPP+V L +   G+ G+   GG  +   +R++    G   HAFS+ NPYG++A  D RQF+H
Sbjct:   95 ANHAAQEGGVDERYFSNEEFASLPLSEPTRKALDEMGFKKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAIELLHKVKFTPRKGTGCIVISPTRELALQIYGVVREICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEDEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCAAVKFYGELLNYIDIPVMDIHGKQKQNKRTTTFFQFCNAKTGIMLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGAKGKGKALLMLLPEELGFLKYLKAAKVALNEYEFPLNKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHALKNIFDVGSLDLQAVAKSFGLVVPPKVTLPVKTSGKTGKRKAGGFDDEGNSRKRFQRSG---HAFSSDNPYGKRAANDKRQFAH 608
[Close]
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Match: A0A6T7F7A1_9STRA (RNA helicase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7F7A1_9STRA)

HSP 1 Score: 697 bits (1798), Expect = 1.360e-241
Identity = 358/502 (71.31%), Postives = 414/502 (82.47%), Query Frame = 3 
Query:  735 FGDLPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAFIIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQTNGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKNKP-IYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLLPEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRG---GGKERDQARRKMGSKG-SGGHAFSATNPYGQKAKGDGRQFSH 2225
            F  LPLSEP   AL +++F  MT+IQ+++IP LL G+DL+GAAKTGSGKTLAF+IPV+ELLHK ++S R+GTG IIISPTREL++Q YGV RD   AG   QT GL+IGGANRR EAERL KGVN++V TPGRLLDHLQNT+GF+FRN+   V+DEADRILEQGFE+++  I+KLLPKERQTMLFSAT TKKVEDLAR+SI  K  IYV V    + +T  GLEQGYV C S+KRFLLLFTFLKKN+ KKIMVFFSSCNSVK+H ELLNYID+PVMDIHGRQKQ KRTT+FFQFCK   G LLCTDVAARGLDIP+VDWIIQ+DPPD   EYIHRVGRTARG +G GRAL+FL PEE GFLRYL+AA+ TLNEY+FP +KV+NVQSQL RLIEKNYYLN++AR+AYRSYLLAYASHS +DI+ VHELDLQAV  AFGFT PPRVDL  SA+G K +G   G K +   +    SKG S GH FSA+NPYG++ KGD RQFSH
Sbjct:  122 FDSLPLSEPTKLALASMEFTRMTQIQSKSIPALLSGKDLIGAAKTGSGKTLAFLIPVIELLHKARFSTRNGTGAIIISPTRELAMQIYGVCRDLCTAGKHSQTYGLVIGGANRRTEAERLAKGVNIMVATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRCILKLLPKERQTMLFSATNTKKVEDLARVSINQKTAIYVEVASETKLATAAGLEQGYVTCESEKRFLLLFTFLKKNKNKKIMVFFSSCNSVKYHGELLNYIDVPVMDIHGRQKQVKRTTTFFQFCKAKKGTLLCTDVAARGLDIPSVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALIFLTPEETGFLRYLKAARVTLNEYEFPTQKVSNVQSQLQRLIEKNYYLNRAARDAYRSYLLAYASHSNRDIFSVHELDLQAVGLAFGFTTPPRVDLAFSAKGDKVKGRHNGSKLKGDPK----SKGLSNGHDFSASNPYGKRPKGDKRQFSH 619
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1349.2594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL1_ECTSI0.000e+089.41RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835ZG10_9STRA3.440e-28280.47RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S1XXW2_9STRA4.920e-25773.28RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430... [more]
W7U0G2_9STRA7.840e-25673.51RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7S2KTK2_9STRA2.100e-24571.89RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=... [more]
B8BY61_THAPS9.010e-24471.00RNA helicase n=1 Tax=Thalassiosira pseudonana TaxI... [more]
A0A7S2PMU9_9STRA1.100e-24370.83RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]
A0A329RG91_9STRA7.930e-24268.88RNA helicase n=10 Tax=Peronosporaceae TaxID=4777 R... [more]
K3XAF9_GLOUD9.210e-24267.82RNA helicase n=1 Tax=Globisporangium ultimum (stra... [more]
A0A6T7F7A1_9STRA1.360e-24171.31RNA helicase n=1 Tax=Attheya septentrionalis TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1349contigF-serratus_M_contig1349:95465..109339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score909.8
Seed ortholog evalue7.6e-262
Seed eggNOG ortholog2880.D7FJL1
Preferred nameDDX18
KEGG koko:K03254,ko:K13179
KEGG Pathwayko03013,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000291,GO:0000462,GO:0000463,GO:0000470,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010501,GO:0010556,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016032,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016442,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019058,GO:0019068,GO:0019072,GO:0019074,GO:0019222,GO:0019439,GO:0019904,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0030684,GO:0030686,GO:0030687,GO:0031323,GO:0031326,GO:0031332,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032991,GO:0033962,GO:0034248,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0042273,GO:0042274,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990417,GO:1990904,GO:2000112
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0342@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_006510.1
EC3.6.4.13
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03012,ko03041
Exons15
Model size2452
Cds size2085
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929329.8599293-UTR-F-serratus_M_contig1349:95464..956071622929329.8599293-UTR-F-serratus_M_contig1349:95464..95607Fucus serratus maleUTRF-serratus_M_contig1349 95465..95607 +
1690962801.5055962-UTR-F-serratus_M_contig1349:95464..956071690962801.5055962-UTR-F-serratus_M_contig1349:95464..95607Fucus serratus maleUTRF-serratus_M_contig1349 95465..95607 +
1622929331.4655735-UTR-F-serratus_M_contig1349:109115..1093391622929331.4655735-UTR-F-serratus_M_contig1349:109115..109339Fucus serratus maleUTRF-serratus_M_contig1349 109116..109339 +
1690962801.674838-UTR-F-serratus_M_contig1349:109115..1093391690962801.674838-UTR-F-serratus_M_contig1349:109115..109339Fucus serratus maleUTRF-serratus_M_contig1349 109116..109339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929329.8702474-CDS-F-serratus_M_contig1349:95607..957331622929329.8702474-CDS-F-serratus_M_contig1349:95607..95733Fucus serratus maleCDSF-serratus_M_contig1349 95608..95733 +
1690962801.5187714-CDS-F-serratus_M_contig1349:95607..957331690962801.5187714-CDS-F-serratus_M_contig1349:95607..95733Fucus serratus maleCDSF-serratus_M_contig1349 95608..95733 +
1622929330.8842123-CDS-F-serratus_M_contig1349:101204..1014531622929330.8842123-CDS-F-serratus_M_contig1349:101204..101453Fucus serratus maleCDSF-serratus_M_contig1349 101205..101453 +
1690962801.527119-CDS-F-serratus_M_contig1349:101204..1014531690962801.527119-CDS-F-serratus_M_contig1349:101204..101453Fucus serratus maleCDSF-serratus_M_contig1349 101205..101453 +
1622929331.2923973-CDS-F-serratus_M_contig1349:102463..1027571622929331.2923973-CDS-F-serratus_M_contig1349:102463..102757Fucus serratus maleCDSF-serratus_M_contig1349 102464..102757 +
1690962801.5363057-CDS-F-serratus_M_contig1349:102463..1027571690962801.5363057-CDS-F-serratus_M_contig1349:102463..102757Fucus serratus maleCDSF-serratus_M_contig1349 102464..102757 +
1622929331.3056548-CDS-F-serratus_M_contig1349:103210..1033091622929331.3056548-CDS-F-serratus_M_contig1349:103210..103309Fucus serratus maleCDSF-serratus_M_contig1349 103211..103309 +
1690962801.5459437-CDS-F-serratus_M_contig1349:103210..1033091690962801.5459437-CDS-F-serratus_M_contig1349:103210..103309Fucus serratus maleCDSF-serratus_M_contig1349 103211..103309 +
1622929331.3239596-CDS-F-serratus_M_contig1349:103815..1039811622929331.3239596-CDS-F-serratus_M_contig1349:103815..103981Fucus serratus maleCDSF-serratus_M_contig1349 103816..103981 +
1690962801.5582683-CDS-F-serratus_M_contig1349:103815..1039811690962801.5582683-CDS-F-serratus_M_contig1349:103815..103981Fucus serratus maleCDSF-serratus_M_contig1349 103816..103981 +
1622929331.336991-CDS-F-serratus_M_contig1349:104345..1044191622929331.336991-CDS-F-serratus_M_contig1349:104345..104419Fucus serratus maleCDSF-serratus_M_contig1349 104346..104419 +
1690962801.5733933-CDS-F-serratus_M_contig1349:104345..1044191690962801.5733933-CDS-F-serratus_M_contig1349:104345..104419Fucus serratus maleCDSF-serratus_M_contig1349 104346..104419 +
1622929331.350616-CDS-F-serratus_M_contig1349:104806..1049651622929331.350616-CDS-F-serratus_M_contig1349:104806..104965Fucus serratus maleCDSF-serratus_M_contig1349 104807..104965 +
1690962801.5844872-CDS-F-serratus_M_contig1349:104806..1049651690962801.5844872-CDS-F-serratus_M_contig1349:104806..104965Fucus serratus maleCDSF-serratus_M_contig1349 104807..104965 +
1622929331.360935-CDS-F-serratus_M_contig1349:105590..1056861622929331.360935-CDS-F-serratus_M_contig1349:105590..105686Fucus serratus maleCDSF-serratus_M_contig1349 105591..105686 +
1690962801.5986955-CDS-F-serratus_M_contig1349:105590..1056861690962801.5986955-CDS-F-serratus_M_contig1349:105590..105686Fucus serratus maleCDSF-serratus_M_contig1349 105591..105686 +
1622929331.3728514-CDS-F-serratus_M_contig1349:106074..1061551622929331.3728514-CDS-F-serratus_M_contig1349:106074..106155Fucus serratus maleCDSF-serratus_M_contig1349 106075..106155 +
1690962801.6118782-CDS-F-serratus_M_contig1349:106074..1061551690962801.6118782-CDS-F-serratus_M_contig1349:106074..106155Fucus serratus maleCDSF-serratus_M_contig1349 106075..106155 +
1622929331.3857758-CDS-F-serratus_M_contig1349:106466..1066011622929331.3857758-CDS-F-serratus_M_contig1349:106466..106601Fucus serratus maleCDSF-serratus_M_contig1349 106467..106601 +
1690962801.6204712-CDS-F-serratus_M_contig1349:106466..1066011690962801.6204712-CDS-F-serratus_M_contig1349:106466..106601Fucus serratus maleCDSF-serratus_M_contig1349 106467..106601 +
1622929331.3975372-CDS-F-serratus_M_contig1349:106800..1069521622929331.3975372-CDS-F-serratus_M_contig1349:106800..106952Fucus serratus maleCDSF-serratus_M_contig1349 106801..106952 +
1690962801.628418-CDS-F-serratus_M_contig1349:106800..1069521690962801.628418-CDS-F-serratus_M_contig1349:106800..106952Fucus serratus maleCDSF-serratus_M_contig1349 106801..106952 +
1622929331.4097493-CDS-F-serratus_M_contig1349:107229..1072901622929331.4097493-CDS-F-serratus_M_contig1349:107229..107290Fucus serratus maleCDSF-serratus_M_contig1349 107230..107290 +
1690962801.6369376-CDS-F-serratus_M_contig1349:107229..1072901690962801.6369376-CDS-F-serratus_M_contig1349:107229..107290Fucus serratus maleCDSF-serratus_M_contig1349 107230..107290 +
1622929331.4217749-CDS-F-serratus_M_contig1349:107835..1079431622929331.4217749-CDS-F-serratus_M_contig1349:107835..107943Fucus serratus maleCDSF-serratus_M_contig1349 107836..107943 +
1690962801.6464071-CDS-F-serratus_M_contig1349:107835..1079431690962801.6464071-CDS-F-serratus_M_contig1349:107835..107943Fucus serratus maleCDSF-serratus_M_contig1349 107836..107943 +
1622929331.4344344-CDS-F-serratus_M_contig1349:108424..1085411622929331.4344344-CDS-F-serratus_M_contig1349:108424..108541Fucus serratus maleCDSF-serratus_M_contig1349 108425..108541 +
1690962801.6560447-CDS-F-serratus_M_contig1349:108424..1085411690962801.6560447-CDS-F-serratus_M_contig1349:108424..108541Fucus serratus maleCDSF-serratus_M_contig1349 108425..108541 +
1622929331.4497793-CDS-F-serratus_M_contig1349:108947..1091151622929331.4497793-CDS-F-serratus_M_contig1349:108947..109115Fucus serratus maleCDSF-serratus_M_contig1349 108948..109115 +
1690962801.665817-CDS-F-serratus_M_contig1349:108947..1091151690962801.665817-CDS-F-serratus_M_contig1349:108947..109115Fucus serratus maleCDSF-serratus_M_contig1349 108948..109115 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1349.2594.1prot_F-serratus_M_contig1349.2594.1Fucus serratus malepolypeptideF-serratus_M_contig1349 95608..109115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1349.2594.1

>prot_F-serratus_M_contig1349.2594.1 ID=prot_F-serratus_M_contig1349.2594.1|Name=mRNA_F-serratus_M_contig1349.2594.1|organism=Fucus serratus male|type=polypeptide|length=695bp
MTKRKVKDKGRVDAKLVAPARAARTTGSNSAAKQSANTKALKERGEPEPL
NSISNNNDHIEDDEDDNEDADVDLDQDGVDGVDVGDSFDDDEDDDDSNDD
SDDDDQDDDGDDSHVAVPGSNPTVKSKTKMPKTATSTAAAKRRRDDEGEL
AVRSKKQRDGEGAPNPPKPSNVENKSAGSNLQAHERVVKLGFFSEMKFGD
LPLSEPMLGALDALKFATMTKIQAQAIPPLLGGQDLVGAAKTGSGKTLAF
IIPVLELLHKVKWSNRSGTGCIIISPTRELSLQTYGVLRDFVEAGNMKQT
NGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQILV
IDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKN
KPIYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVF
FSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLC
TDVAARGLDIPAVDWIIQYDPPDQSAEYIHRVGRTARGQSGQGRALLFLL
PEELGFLRYLRAAKATLNEYDFPVKKVANVQSQLSRLIEKNYYLNKSARE
AYRSYLLAYASHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQK
GRGGGKERDQARRKMGSKGSGGHAFSATNPYGQKAKGDGRQFSH*
back to top

mRNA from alignment at F-serratus_M_contig1349:95465..109339+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1349.2594.1 ID=mRNA_F-serratus_M_contig1349.2594.1|Name=mRNA_F-serratus_M_contig1349.2594.1|organism=Fucus serratus male|type=mRNA|length=13875bp|location=Sequence derived from alignment at F-serratus_M_contig1349:95465..109339+ (Fucus serratus male)
CCAAAGGTTGCCAAAAATATACGGTGTACGCCTATTACAGCAGCAGCGCA
GCGGTCAGGATACCTCCATACTATCTATTTCAAACAGCGGGTTCTCTTTT
GGCGCAGTTTCAGAAGGTGTCGTTTGCGTTCACTCCGGCGAAGATGACGA
AGCGGAAAGTGAAGGACAAGGGACGTGTGGATGCCAAGCTCGTTGCACCC
GCGAGAGCTGCCCGGACCACTGGAAGCAACTCCGCGGCAAAACAGTCGGC
AAATACCAAGGCTCTCAAGGTACTGTATGTAGTGGGTTTTCTGTCGTTCT
GCCGGATAGAAATAGAAAAGGGAATACCGGCTTTGGCACGAATGCTTATT
GAGACACAGCCCTACAAGTACTTGTGATCCACTGAACGCATCTAAACCTT
CTGGGAATCCACCCAATCGAGGGAAAAACTGTTACTAAAGGACATAAGAC
CTAACTGTTAGTAAGCTGTTAGGGCGCATACCTTCCACGATGGTAGTAGC
ATAGGGTGAACAGTACCAGGTATATTATCGGGGGAAAACCTACCGTTATA
CTGTACACTGAAGTTAATCGTCATGCCGGTGCGTCAAAACAGAGGCAAAA
ATCACACGAGGAACCTGGATATCACTCAGTTATGTCTCGAAAACTGTCGT
TATTAGTCTATTGTGTGTACACATTCCATTTGCTGTTCAACCACTTTTTA
CGAACCCAAAAAGTCCGAATTTGGAGGTATTTGGGTATGTATGTTATTAT
TATTATTATTATTTCCTCACATAAGCCCGATCTCTCGAACCTGTGTTCAC
AGAGTGCAAGGAGCATACCATCCATACCCAAACTATTATAAAACTAATGG
CTAGCAGTCACCAAAAGAAAAAACACACGCACACGAAGAACAGGCAACTT
CCACCACGGAGTCCGCAAAAAAGGCCTATCAAACTACAGTAGTAGTACTA
AACCCGCTGAAAAGCAAATTTCGGCGTGCAACGTCCGACTACCTTGACAA
AGCACTGCTGCTGAGATGTTGCATACACGAGCTACCTGCGGTGACAACTC
GCAAAATGTCAAGCAGACGCCAATGCGGTAACGGAATATCACATGCGGAA
TCATCGCAGTAAAGGTCTACTTACTACTGTCTGAAGTGCTGTTTGAAATG
ACCCTCTGCAAGCCCGCGGCGGAAACAGAAACTAGACAGAGACTAGCTAG
ATGTATGTATATTAATTAAATTGCACATAACCGCGCAATCCGGCCCTGTC
ATCCTAGTCATTCTATGCTTTTGGAGGTATTTGGGTAGACTATGTATATA
TGTATAAGTATTTATTAAATTGCACATAACCGCGCAATCCGGCCCTGTCA
TGGTAGTCATTCTATGCTATTAATACTCGTTTTGATCCTCCCAAGGGGGA
TGTATGTATAGTCATCACATATAACAAGAGTAAGGATTAACCGGGTAAGG
TTTCCAATCCTGCTCGTGGTCAGCTGAACAGGGACAATGACTAGTTCCCT
GTCCCCGTTCGCGCCTGTGAAAATGATCTCGCGAGACGGGTTCGGCAGTC
CCGTCCCGCGTCAGCCTGCTCATCTCCACACTCAGGCTGAATCTGGTGCT
TTCTTAAGAGATTCCTCCCGATTTCCGCGGCGGCGTCCATTTCTTTATTT
AAACCGCCATACGCCATCGTGTCAGTCCCGAGTTTATCGGGTCACGCAAT
TGCGTACAGATGGCGTTCACTGCCTAAAGGTCGCCGGCACAGGGCCAGTA
AACCTTAAGGTAGTTCGGAACGGGTGCTGCCTTGGCAGGTCACCATGGAC
CAATTGATCTGCGCCTCTCTTTCCCACCCCCACTATTGGTATGAAGTGGG
CATGTTGAAAGTACCGGCGGACAGTACGGCGACAGACGTCATGATTTCTT
CGTTCAATTTTTGGGAGCTCGGATTTTTGTGGTGCCGACTCGCAGAAATC
CACGTATCTCTGGGAGCCAGCTTGACTATAAAATTGTTTTCGGATTTTGC
CAATACCAGCCCAAGTCACAAAAAAACAGACGGCTGCCTTTGAAATTATG
TCCGTTTCCTACTCGACCATACCCGTCGTGATAAGTGTTGTGTAGGCATC
TGTCGTTCCACTACCCAATCACAGACAAGGCAGCATACAGCATGTAGCAG
AAGAGAATCTTTCAAACTCTCTTCGAGAGTGTGCAGAAAGTCTACAGACA
AACAACACATAAATGTTAGTCTTTTTTCCCCTTGCCAGGGCTACCGAGCG
GGACTCTACTACACGACGGTTGTGCATTCTATATTTTTCTGACACGTGCT
TTGTTTTCCTTTCTTTCTGCCGTTTTGTTTGTTTGTTACCAGTATGTCTT
TGTTTTTATGCTCTCGTTGGAGCTTTGTAGAGGTTCCTCTGATCTTTTCC
TGCCCAGCAGACCACGTACCGGATTGGCAACCACATACGAAGTATATTGT
TTTGCTTTGCTTCGTTTTCGTCTTCATGCTTTCGTTGAAGCCGCGGCCCT
TCGTTCAATCGCCCTTCGATATGCAGGCGCCCCGATAGCCACACGTGTTT
TTTTGGGGGGGAGATATCGCTTTTTCCGAGTATTTTTTATACTATATGAA
GAGTACGTCGTACGTTCCTAACCTATTAGTGTTTTTCTACCTTGTGGCCA
CGGGCTGGATTTTTAACATCAGCTTATGTGAGAATTCAACCAATTAATCA
ATCAATCAATCGGTATGACTGGGTATCAGTATGGTTGAGGCCCGGTTGGT
TAATGTGAAGAAAACAACAACAGAGACAAACACGGAGGGAAACAAACTCC
TGTGCGAAGGGAGAGGGGTAATGCAGCTCACGATGAGCATGCGACTACCG
TTTAGACAATAAGATACTCACTGATGATTGAACAGGCGCCGCAGTACATA
GGTGGGCGCAGCATCATCTCAGTCGAGGTCGAGCTTTGGTTTTTCGTTGG
CTGGCGTTCAAACACTATTAATACTTTGTTTTTTCCTCGGTTTCAAAGAT
ACGTACAACTTCTTCATTTATTCTAACAGTGTGTGTTTTCTTCCCACTTA
TTCTGGACATACAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGG
AAGGTCACACAGGATTTCTCATCCACTATCTTTCTGCGGTGCGTGCCTTT
AATTTTCTCGCGAGAAGGATTCCGCCATTCCTTTCCCTCGTCGACCGTGA
AGTCGAATTTGTGTACTAACGATTTTAATCGTTCTTCACTAGTTGGACAT
TTTTTATTTATTTATTTAGTTTCAATGAGAAAAACCCCGTTTACCGGAAT
CGAACTCACGTCCCAACGTGTCACGTTTACGAGGTTACTTCTGAGCTGTA
CAAGGTAATTAGTACCTGATACCTGGTACTGTATCAAGTATATAGTAGCG
TTTCATACGTTGGACACTGGACACTGCACGCGTATGATACTGTAATGTAT
GTATGTATGTATGGTCATCACATATATTAAAATAGTAAGAGTATGGATCA
ACCATGTAAGGTTGCTAATCCTGCTCGTGGTCAGCTAAATAGGGAAAATG
AATATTCCCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTCGCGAAACGG
GTTCAGCCGTCCCGTTCCGCGTCAGCCTGTCCATCTCCATACTCAGGCTG
AATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCa
tATATTTATATCAAACCGCCATACGCCATCGGGTAAGTCCCGAGTTTATC
GGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGC
ACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGCAG
GTCACCATGGACCAAATAATATTCGCCTCTCTTTCCCACACCCACTATTG
GTATGAAGTGGGCATGTTGAAAGTATAGCAGTGATACTATAGCTCTACAA
TAGTACAGCAGCAAGCAGGTTTAAATAGATGCCCTAGCATGGAGAGCAGC
TACACGCGGGGGCCGAAATGGCTCCCGGCATGCATGCGACTACCTTTTCG
GCAGTTAGATACAACAGTAGTAGTTCCTTTGAGGCGCCGCAGGATATGAG
TGGACATGTCACCATCTTAGTCTAGGTCGAGCAGCAGCTATTCGCTCGCA
TTCAAACATGTTTCCACTATTGAAGATATCTCCGAAGGGCCCAACTATCA
CAACTATCAGACATACATCCAGGTATTATTGGTAGGAGCTTCTTCCTCCG
ATTTCCCTGGACTTGCTTTCAAAAATTGATGATACATTTTTTGCGGCGCC
ATCCATTCTGGACATCAATAGATGTACCAGCCGGGTTCACACAGGGTTTC
TCATCCACCTTCCTTCTGCGGTGCGTGCCTTAATTTTTATCGCAAGAAGG
ATTCAGCCATTCCTTTCCCTCGTCGACTGTGAAGTCGAATTTTGTGTACT
AACGAATTAATCGTTCTCCACCCGTTGGGCATTTTATTTTAGTTTTTTTA
GTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCACGTCCCAAC
GTGTCAGAAGGTTACGAGGTACCTCTGAGCTACCGGGGCGACCGGCATGC
ATGAAGAAAATCCTAGGGAAACATCGCAAATGTCCGGGGCACAGATTTAT
TATTTTTTATCCTGATTTTTTTTACTATTTAATACCATAAAAAGCGGCCT
TCGAGCTGCGAATGCGGTACAAAGTATGAAGTAACGTACCAAGCAGTTAC
CATGTGTGTTTTTGTGTGTATTTTCTTCCCATTTATTGTGGACATCAAGT
TAGGAGGAAGGTCGCACAGGATTTCTTGTCCACCTTCCTTCTGCGGTGCG
TGCCTTAATTTTTCTCGCGAGAAGGATTCAGCCATTTCTTTCCCTCGTCG
ACCGTGAAGTCGAATTTTGTGTACTAACAATTCGATCGTTCTCCACTCGT
TGGGCATTTTTTATTGTAGTTTTTAGCTTTTAGGGAGAAAAATCCCGTTG
GCCGGAATCGAACTCACGTCCCAACGTGTCAGAAGGGTACGAGGTTACCT
CTGAGCTACCCGGACGACTGGCCATTGTGCCAGGTACTAATAATACTAAT
AATAATACTAATACTACGGACGTTCACCGGTCGCCCCGGTGGTTCAGTTG
GTAACCTCGAAATCTTCTGACGGCGGGACGTGAGTTCGAATCCCGGTGCA
GTCACACGAACTCGAATGCCCAACAAGTGGGGAACGATTAGTTCGTGGGT
CCACAAAATTCTACTCCACGGTCGACGAGGGAAGGGGACTGCTGAATACT
TGCCGCGAGAAAAATGAAGGCAGGCACCGCAGAAGGAAGGTGGAGAAATC
CCGTGTGATCTTTGTCATGTGTACCCTCAGCTGGTACGTCCACAAGCCTG
ACGTCCAGAATAAATGGGATGACAACACACACACACACACACACACACAC
AGATACCAAATAACGTGCGCTGTTGTTGTTGTTGTTTCCCACATTCAGCG
TACTGGTTGCCAACCCGAAAAACGAATTTACACGGTGGCCAATCCCGCTC
GTGGTCTGCTGAACAAGGAAAAGAAAAAGAAGAAAAAAAAGTGTGGCAGC
GCACCCTCCACCCACGCTGTTTGTTCGGAGAAAAAAAAAAAATAAAATAA
AGTCACGCGATGCATCTACATGTGTACTGTATTAAATTATCGCTAATCCC
AACCCTCGACGTTTTTTGTGTGACGTTTCAATTCGGTCAGGAGAGGGGTG
AACCTGAACCTTTAAACAGCATTAGTAATAATAATGACCACATTGAGGAT
GATGAAGATGACAATGAGGATGCAGACGTAGACCTAGACCAAGATGGCGT
TGATGGTGTTGATGTTGGTGACAGCTTTGATGATGATGAAGATGACGATG
ACAGCAATGATGATAGCGATGACGATGATCAGGATGACGACGGAGATGAC
AGTCATGTAGCGGTACCGGGGAGCAATCCGACGGTGAAGGTGCGTACTTC
GATGTAGTTGCATCCCGCTAGCTAGGTGGCCACTGCCCGTCCCACAAGTA
GAGGCGGCATGCAGTGCCAGGTAGAATCTTGCTTTGTTGAATGCATGTAT
AGTCTAGTAGGAATAAAATAGAATGCTGGTATTAAGCATTAATAACACAC
ATCAAAGGTAATAGCATCCTCAGAGATATGTAAATCTCTACTTGTACAGG
TACTAATAATGTTAATTTTAATACCTGCTTTACTTTTATCATTTTAAAAT
ATACAGTAGCAGTCAGTACAGTACAGTACAGTACAGTAGTCGGGACATGG
GAATAACCAAGCCTTGTGTCTACGAATTACCATCCCAGTACGATTTTTCT
TGTACTATATCAGTAGCCTATAATAGTCTCTAGTCTAGCAATTGATAAGA
GCATAAAAAGATAACAGTAGATATCCAGCGCTTGTTAAGCCCTGAGCACT
GCGTCCGAGTTACTTATACATGAAGGCCGTGCGGTGCGGTGCATACAGTC
AAGAACAGTAGTATGTATGTACCGGTATGTATGTACGGCCATCGCACATA
GCAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTACTCGTGGCCCCG
TGCGTGCCTAAGAATTTGGCCTCGCGAGACGGGTTCAGCCGTCCCGTCCC
GCGTCACCCTGCTCATCTCAATACTCAGCTGAATCTGGTGCTTACTTACG
AGATTCCTCACAGCTGAATCTGGTGCTTACTTACGGGATTCCTTCCGAAT
TCCGTACAGTACCTGGTAATGTAATGTTTGATATGGGAAGCGCATCTCGG
CCCCAATGCACACATCACACACCACACATCATATTTTATATTTTATATTG
TTCTCACTCCAAGATTAAATAGATTCAATATCACCAACAAGTGTGCGGTA
CCTCGTGTACCTGGTAGCATTTAAAGAATACTTTTAAGCTAACATTCATT
GGTTCATTTTTTGCTCGTTTTACCTATTTAATACCTCGCTCGGCCTTAGT
CGAAGACAAAGATGCCAAAAACAGCAACATCAACAGCAGCCGCCAAACGC
CGGCGAGATGATGAAGGAGAACTTGCTGTTCGGAGTAAAAAGCAACGGGA
TGGCGAGGGAGCACCTAACCCTCCAAAACCTTCAAATGTTGAGAATAAAT
CGGCAGGATCAAACCTCCAGGCGCACGAGCGGGTGGTGAAGCTTGGCTTC
TTCTCGGAAATGAAGTTTGGCGACCTTCCACTCTCGGAACCTATGCTGGG
TGCCCTTGACGCCTTGAAATTCGCCACCATGACGAAAATTCAGGTGATTG
AGTTACTGACGAAATCCGCTACGCTTGTTTCAACTGTCCTGCTGCGTTTG
CGAAGGAGCTATTCTATTCTAGTGATAAAGTTTCGTAGAAAAAGGCAGGC
ATCGTACACTGCTAATTATACTCCTACTAAATAGTACCGTTTTTATAGTA
ATACAGGAGTAATAGCCACCTTGCATACTCTTGCATCCGCATGTGGGTCA
CGAGAGACGGTTTCTTTTTATTTAATGCATGCAGCAGTTGAATCGTCGTT
GATTCCTCTCATCTCGTAGGCAAGCACAAAATATGATTTCACGTGCAGTA
TTATTAATATTATTAGCGCCCATTCTGATATTAATAGCGTCAATCCCAAG
TGCAACGTATCCAAGGACCAAGATTCTACGTTATCATGGGCACAAACCCC
ACCGTAACGATATTTTTATTGAAAATAATGCAATCCGGCGCTGCAGGCTC
AAGCGATCCCTCCCCTGCTGGGCGGACAAGATTTGGTCGGGGCCGCGAAA
ACGGGATCGGGCAAAACGCTGGCCTTCATCATTCCTGTCCTCGAGGTGTG
AGGTCTTCAGTACTGAACACCTATTAATATAATATAGCTGTGTAGTTTTG
TTTTGTTTCTCGCTTTCAGCATACTTTAATCTCCATTCTAGTCAATCAAT
GTCGCGTGGTGGCAGCGAGTGACTTCCAGGTTTAGGGTTCCTCGTGTTTT
GGACCCATGCTACACCTCGCCATCTCTATCACCGCTTTGACCGGGGCGTT
CAAAGTAGTTCCTGGTACGAAGCATAGCAGCGCATGGGTACCCCGATTTC
TTTTTTGCCGAAGTGGGCTGTCATTGACCGACCTGTTGATATAATAACAA
AGCGAAAGGAAAGGAAAGGCTGGAGCTACACTTGTCCTCAATAGGTACAG
TATTCATACAGTATTAATACCTGTACATATCCTCTTACAATGACCAGTGG
CTAGATTTACGCCGTATGCCTCTTCGAGCAGCATAATAACTAAGACTAAG
TTGACACGTACGCATATATTTTCGGTGACCCTCGATGCCTCGATGGCTCA
GTTATTGCACAAAGTAAAGTGGTCTAATCGGAGTGGGACTGGGTGTATTA
TCATCAGCCCCACACGAGAGCTGTCACTGCAGACGTACGGTGTACTGAGA
GACTTTGTCGAGGCGGGCAACATGAAGCAAACCAATGGTCTGCTGATTGG
AGGAGCCAACCGCAGAGGTACGAAATCACCAGCTCAAGATGTATCCCCAG
GGGTCACGATCATCAAAATAATACCATGAAATGCCATGAAATAGGTTTTA
TTGTGTAGGTTTCAGAGAAGCGGACATTGTAGTGAGTATCAACTTGGAAC
CCTTACCGTCCGACACTGTAGGTGTAGGTGTAGGTGTAGCTCTTTGGTGT
GTCTTTAAGATGTGTGATAATATTTGGTATGTTATTATGTTATTAGAGGA
CGGGCACGTACGAAGATTGACAAGAAGAGATTCATCGCACGCTCTCACAC
AATATCGCACCATAATGCTAACCGTCCTTCAATTATTACTTTATATCGTA
TACTATTTGTTTCTCTTGACGTCTCTGCCAGCGGAAGCCGAACGTCTGGT
GAAGGGCGTGAACGTCCTGGTGGTTACCCCGGGTCGTCTCCTCGACCACC
TGCAGGTCACAAGTGTCACAACTGCACTGTACTGTACTGTACAGTACTGC
ACCTTGTTTGTTCTGTTCTGTCGTTTCGTACTTAACTCCACTGTACCGCA
GTATGTATAATACACTTGTACTTGATTATCTGGATTAGCTAGCTCCATTG
ACAACATCGTCGAAAATGGCTCATCGATTCGCTTCTATCATTGAACGCTT
TTGCATCCTAATCTTTAGATAGTGTGCATGTTGGGTTATGCAGGACGCGA
AGGCTTTGCATGATACTTACCGCTCGCGTACGTGAATGCTCCGATGGATG
TCACACGACTAATCCGTTCAGTCCGCGTCATGAAATCATCTAACCTCGAG
CCCGCTTCCTGACCCTCAATTCAATTGCATCCCTTATCCCAGAACACGAG
GGGGTTTCTCTTCCGTAACATGCAAATTTTGGTCATCGACGAAGCGGATC
GAATCCTTGAGCAGGGATTCGAAGAGGAAATGCATCAGATCATCAAGCTC
CTTCCGAAAGAAAGGCAGACCATGCTCTTCAGTGCAACTCAGACAAAAAA
GGTAAGGTAAGGTGAGGTTAGGATTATTTACAGGTGTTATTCTATACCAC
TCAGAGTTGAGCACTTGGTGATATTTGGATCCTTGCGCACATTCGCGTCA
GAAGTTGCCGTACACCTATCTGTACACGTGATGCGTCGTGGGCAGCACAG
TTGCTAGTCCCGAACCGTGCGACGAAATCACTATTACTATATTACTATAT
TACTACGAGTGATCTAGTAGACTAGGTAACCTGCACACCTGCTAGTGCGG
AAGTCGTGAGTTCGATTCTTACCAAAGTAGGATTTGTATTCTTTCTTTCG
TAACGGAAAGCGTGGGAACGTGAGTAAGTAAAATTCAACCATTGGTTGAC
GAGTTGTAAGATTGCTAACTTGCATCGCGATAAAAAATTGCAAGGCGTGA
ACTGGGGAGAGATGGGAAGATCCTTTGTGACCACATACGGGATGGTAATT
GTGAGGTCCATCGGTCTTATTATTAATATGGACCCTTCCTTCATGGAATG
TTTGGTTTGAAAAGTCAGGCACAAGTCGCTCACAGTAAGACCTCCGTGGG
ACGATACATTGATGATGGTACGTACGCACGCCAAAATTATATGTAATTTC
GTCGGAATGTCTTATTTTCGACTCAGGTCGAAGACCTCGCCCGGCTTTCT
ATCAAGAACAAGCCCATATATGTTGGCGTAGATGATGCCGAACAGGAGAG
CACGGTGGACGGGCTTGAGCAGGTCAGATCATGTGCTATTATACTATTAA
TTAGTGACGTTTTGTTTGCCATTATCATTCTCGTTTCTAAAGGCGGCCAG
GGCAAGCTCTATAGAAGCACTGGTGGCTATCTGCCAAAAAGTTTAGTGTC
GCTGGCACTGGCACTCTCTCAAAGTTGGTACCGGGTAGCACGTAGCATTT
TAGTATTTTGGGGCATGGCCCGGCACCTTATGAAGTACAAGTGCAACCTG
ACAAAATAACCATGGGATATTCGTAAATATACAGTATGTTAATTATGTCT
AAGTACGCGCTCTTGCCATGCTCTAAAAAACGTAACAGATCGGTTATGAC
AGGATACATGTGTACTTCCACTGTAACCAGTACGCTCTTTCTTTTTCCTG
TGTCTGCTAGGGTTACGTGGTGTGCCCCAGCGACAAACGTTTCCTGCTGC
TCTTCACGTTTCTCAAGAAAAACCGAAAGAAAAAAATCATGGTGAGCTTG
TCGTGCCACAATTCCGCAATCGTTTCAGTTACTTGTACAAGTTAAGACAT
AATGTAACATAATGTATTGCATAGTCTTACTTGTACTTCGCAGTAACATG
ATGGTCATGTGGAGGTTCAGACGTTGAACAGGTACACTCTCTCGTATCCT
TGCTGTCATATACAATATACAGTACATTCTCATACACAGTCATACACATA
GCGCTCGTTCGAAGTAGCTCGGTGTCGCCAAAAGGCGGTTTCCTGAGCTA
ACTTATACTGTGCCTGGTATAATGTACGGTACGGCATACTTGAACGGAAC
AGGTGTTTTTCTCGTCGTGCAACTCGGTCAAGTTTCACTCGGAACTACTC
AACTACATCGACATTCCTGTTATGGACATCCACGGTCGCCAAAAGCAGCA
GAAGCGCACCACCTCCTTCTTCCAATTCTGCAAGCAGGTCAGGTCAGGTG
CTGTCGGAGGTGACGGATGCTTGAAGAAGAAAAAAAGTCAAACTAATACG
AAGTACCTGGCACTAAATACTAATACCTAATACCAGGTACTAAATACTGG
TATGAAGCGTACTGTTAGAGATTTCACTTTTTCCTATGTGTAACGGGATC
CAACGGGCGTCCGCCTACTACTAATTTCTTCGCTAGGATACGGGAGTATT
GCTCTGCACGGACGTGGCAGCTCGTGGGCTCGACATCCCCGCCGTGGACT
GGATCATACAATACGATCCCCCCGACCAATCAGCGGAGTACATCCACAGA
GTCGGCCGAACCGCCAGAGGACAGAGCGGACAGGGCAGGTCAAGTCCGTT
GACGTTGAATACGAACTTGTAGACAACGACACCTCCAATGCGTCCTGTGC
ATGTACCTCGTCTGAGAGAAAGAATGTTCTGTTGATGGAGCTCGAGATGT
CGGCAAACAAAATCTTTCAAAAGTCAAGTTGAGGTTGGGAGGGCGTCTTA
TACGACTCGGCGCGCGGACGAGGTGTCACTAGAAAGTAGTTTTGCAGCAT
CGTAATAGTATTAATAGTATCTTGACGTGGTGCGGCCTTCTGTCGTTTGT
CGTTTGGCCGATCAGGGCTCTCCTGTTTCTTTTGCCGGAGGAGTTGGGCT
TCCTGCGCTACCTTCGAGCGGCGAAGGTGAGCATGTGTGTTTCTTTTGTG
TGTGTTGCCATCCCATTTATTCTGGACGTCGGATTTGTGGACTCAGCAGC
CGGGGCCACACAGAGGAAGAAAGTCACACATTCTGTCTCTGTCTCCGCCT
TCCTTCTGCGGTTCTTGCCTTGATTTTCATCGCGAGAAGGATTCAGCCAT
CCTTTCTCCTCGTCGACCGTGAAGTCGAATTTTGTGTGTCCACAAACTAA
TCGTTCGCCACTTGTTGGGCATTTATTTACATTTGTAATATATTTCTTAA
TTATTTTTTGTGAGGAAAAATCCCCGTTTGTGTGACTGCACCAACATTCG
AACACACGTCACAACGTCAGAAGGTTTCGAGATTCCCAAATGAACCACCG
GGGTGACCGGCTACTATACTATTATATAATAGTATGGAATGGAGATACCA
GTGTCAAATATGAAACTATCAATAACAAGAATACAAATGCTTTCTAGTTG
CATTTGTGTCGACGTCCAACCACGTCACCTCATAAGCTATCACGTATTCT
CGCGGACGTCGAACTTGCCAGGCAACGCTTAACGAGTACGACTTCCCAGT
GAAGAAGGTGGCCAACGTGCAGTCGCAGCTATCCCGCCTCATCGAGAAGA
ATTACTACCTCAATAAATCTGCAAGAGAGGTAACCTTACAGACTGCGTTC
CATTGTGATGTATATGCAAGATTCAGCCTGAGTATGGAGATGAGCAGGCT
GACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGCCCAAATTCTCGGGC
ATGAACGCGAACAGGGGAATACTATTTTCCCTGTTCAGCTGACCACGAGC
AGGATTGGTAACCTTAATGCATACTCTTGCTATATGTGTGACCATACATA
CTTCGTACATAGATATGCCTGGTCCTACCGCGGGCGTTTGATGGAAAATA
GACCCGTCACTGTAGTCGGTAAACGCCAGTGTAGGTGGATGTGAGAGCAC
AGTACAACTGTCAAGTTGGTAGTCCTCTTCGATATCGCCGGCGGCTGGTT
GATGTCTGTACGCCATGGCCCCACAACAATTTTTCTCTAAGTTTTCTAAA
ATGGCTTCCCTAACGTTCTGTATCTTCGTATTGTTGATGTGTGTCGCTGA
ATCATGCCAGGCATATCGATCATACCTTCTGGCGTACGCTTCTCATTCGC
TCAAAGATATCTACGACGTTCACGAGCTGGACTTGCAGGCCGTGGCGAGA
GCGTTCGGCTTCACCGTACCACCACGGGTACAAGTCACACACCCTTTACA
AAAACACATAGCTCTACACACCCTTGTAATGCACCCTTTGAGAAACGTGG
CACTGAAGTCGAAAAATGTATCCAAAGGCCAAAATACTGAATTCATGTTG
TGTAAAAGTTTACAGTGTGGGATAAATTAGTGATGTCATCAATAACGAAA
TATATTCCGGCGCTGTCGTAAAAAGTCTACTTTTGAAACCGAATTTCATA
TTTCGAATTTTAACCGTTTTAAAAATGGAATGTTTGAGTAAACGGTCTGT
AGACTTTGGGACCATCGAGATAGTGTTCGTTCGCTACCCACTATTAATAC
AGGTGATTGTATGTCAGACCTGTGTCGTATCTTCCCTGTTATGCCCTTTA
ATTTTTAGTCGTTTCTGTTGCGCACTTTTGTAGGTGGACCTTAAGCTCAG
CGCCAGAGGCCAAAAGGGCCGAGGGGGAGGCAAGGAACGAGATCAAGCAA
GGCGAAAGATGGGATCAAAGGGATCTGGTGGGCACGCATTCAGCGCAACA
AACCCGTACGGACAGAAAGCGAAGGGAGATGGGAGGCAGTTTAGCCATTA
GCGCGAAGCCTCCATTTTTCTAGAGAAGATAATTCAATATTTCAAGACGT
CTTGAGAATACGAGGAGAGTTGATGGAAGGGTTTCTTCGTTTTGATTACT
ATAGTACCGGCCCACTCATAAGAAACACCTATTTTGAGTAAGGCTTAATT
GCCCCCGCGGATGCAAGCGCAATTTCTTAATTCACAATTTCTTATTGCTA
GCCAAGAATATTGCACCTATTTCTT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1349:95465..109339+

>mRNA_F-serratus_M_contig1349.2594.1 ID=mRNA_F-serratus_M_contig1349.2594.1|Name=mRNA_F-serratus_M_contig1349.2594.1|organism=Fucus serratus male|type=CDS|length=4170bp|location=Sequence derived from alignment at F-serratus_M_contig1349:95465..109339+ (Fucus serratus male)
ATGACGAAGCGGAAAGTGAAGGACAAGGGACGTGTGGATGCCAAGCTCGT
TGCACCCGCGAGAGCTGCCCGGACCACTGGAAGCAACTCCGCGGCAAAAC
AGTCGGCAAATACCAAGGCTCTCAAGATGACGAAGCGGAAAGTGAAGGAC
AAGGGACGTGTGGATGCCAAGCTCGTTGCACCCGCGAGAGCTGCCCGGAC
CACTGGAAGCAACTCCGCGGCAAAACAGTCGGCAAATACCAAGGCTCTCA
AGGAGAGGGGTGAACCTGAACCTTTAAACAGCATTAGTAATAATAATGAC
CACATTGAGGATGATGAAGATGACAATGAGGATGCAGACGTAGACCTAGA
CCAAGATGGCGTTGATGGTGTTGATGTTGGTGACAGCTTTGATGATGATG
AAGATGACGATGACAGCAATGATGATAGCGATGACGATGATCAGGATGAC
GACGGAGATGACAGTCATGTAGCGGTACCGGGGAGCAATCCGACGGTGAA
GGAGAGGGGTGAACCTGAACCTTTAAACAGCATTAGTAATAATAATGACC
ACATTGAGGATGATGAAGATGACAATGAGGATGCAGACGTAGACCTAGAC
CAAGATGGCGTTGATGGTGTTGATGTTGGTGACAGCTTTGATGATGATGA
AGATGACGATGACAGCAATGATGATAGCGATGACGATGATCAGGATGACG
ACGGAGATGACAGTCATGTAGCGGTACCGGGGAGCAATCCGACGGTGAAG
TCGAAGACAAAGATGCCAAAAACAGCAACATCAACAGCAGCCGCCAAACG
CCGGCGAGATGATGAAGGAGAACTTGCTGTTCGGAGTAAAAAGCAACGGG
ATGGCGAGGGAGCACCTAACCCTCCAAAACCTTCAAATGTTGAGAATAAA
TCGGCAGGATCAAACCTCCAGGCGCACGAGCGGGTGGTGAAGCTTGGCTT
CTTCTCGGAAATGAAGTTTGGCGACCTTCCACTCTCGGAACCTATGCTGG
GTGCCCTTGACGCCTTGAAATTCGCCACCATGACGAAAATTCAGTCGAAG
ACAAAGATGCCAAAAACAGCAACATCAACAGCAGCCGCCAAACGCCGGCG
AGATGATGAAGGAGAACTTGCTGTTCGGAGTAAAAAGCAACGGGATGGCG
AGGGAGCACCTAACCCTCCAAAACCTTCAAATGTTGAGAATAAATCGGCA
GGATCAAACCTCCAGGCGCACGAGCGGGTGGTGAAGCTTGGCTTCTTCTC
GGAAATGAAGTTTGGCGACCTTCCACTCTCGGAACCTATGCTGGGTGCCC
TTGACGCCTTGAAATTCGCCACCATGACGAAAATTCAGGCTCAAGCGATC
CCTCCCCTGCTGGGCGGACAAGATTTGGTCGGGGCCGCGAAAACGGGATC
GGGCAAAACGCTGGCCTTCATCATTCCTGTCCTCGAGGCTCAAGCGATCC
CTCCCCTGCTGGGCGGACAAGATTTGGTCGGGGCCGCGAAAACGGGATCG
GGCAAAACGCTGGCCTTCATCATTCCTGTCCTCGAGTTATTGCACAAAGT
AAAGTGGTCTAATCGGAGTGGGACTGGGTGTATTATCATCAGCCCCACAC
GAGAGCTGTCACTGCAGACGTACGGTGTACTGAGAGACTTTGTCGAGGCG
GGCAACATGAAGCAAACCAATGGTCTGCTGATTGGAGGAGCCAACCGCAG
AGTTATTGCACAAAGTAAAGTGGTCTAATCGGAGTGGGACTGGGTGTATT
ATCATCAGCCCCACACGAGAGCTGTCACTGCAGACGTACGGTGTACTGAG
AGACTTTGTCGAGGCGGGCAACATGAAGCAAACCAATGGTCTGCTGATTG
GAGGAGCCAACCGCAGAGCGGAAGCCGAACGTCTGGTGAAGGGCGTGAAC
GTCCTGGTGGTTACCCCGGGTCGTCTCCTCGACCACCTGCAGCGGAAGCC
GAACGTCTGGTGAAGGGCGTGAACGTCCTGGTGGTTACCCCGGGTCGTCT
CCTCGACCACCTGCAGAACACGAGGGGGTTTCTCTTCCGTAACATGCAAA
TTTTGGTCATCGACGAAGCGGATCGAATCCTTGAGCAGGGATTCGAAGAG
GAAATGCATCAGATCATCAAGCTCCTTCCGAAAGAAAGGCAGACCATGCT
CTTCAGTGCAACTCAGACAAAAAAGAACACGAGGGGGTTTCTCTTCCGTA
ACATGCAAATTTTGGTCATCGACGAAGCGGATCGAATCCTTGAGCAGGGA
TTCGAAGAGGAAATGCATCAGATCATCAAGCTCCTTCCGAAAGAAAGGCA
GACCATGCTCTTCAGTGCAACTCAGACAAAAAAGGTCGAAGACCTCGCCC
GGCTTTCTATCAAGAACAAGCCCATATATGTTGGCGTAGATGATGCCGAA
CAGGAGAGCACGGTGGACGGGCTTGAGCAGGTCGAAGACCTCGCCCGGCT
TTCTATCAAGAACAAGCCCATATATGTTGGCGTAGATGATGCCGAACAGG
AGAGCACGGTGGACGGGCTTGAGCAGGGTTACGTGGTGTGCCCCAGCGAC
AAACGTTTCCTGCTGCTCTTCACGTTTCTCAAGAAAAACCGAAAGAAAAA
AATCATGGGTTACGTGGTGTGCCCCAGCGACAAACGTTTCCTGCTGCTCT
TCACGTTTCTCAAGAAAAACCGAAAGAAAAAAATCATGGTGTTTTTCTCG
TCGTGCAACTCGGTCAAGTTTCACTCGGAACTACTCAACTACATCGACAT
TCCTGTTATGGACATCCACGGTCGCCAAAAGCAGCAGAAGCGCACCACCT
CCTTCTTCCAATTCTGCAAGCAGGTGTTTTTCTCGTCGTGCAACTCGGTC
AAGTTTCACTCGGAACTACTCAACTACATCGACATTCCTGTTATGGACAT
CCACGGTCGCCAAAAGCAGCAGAAGCGCACCACCTCCTTCTTCCAATTCT
GCAAGCAGGATACGGGAGTATTGCTCTGCACGGACGTGGCAGCTCGTGGG
CTCGACATCCCCGCCGTGGACTGGATCATACAATACGATCCCCCCGACCA
ATCAGCGGAGTACATCCACAGAGTCGGCCGAACCGCCAGAGGACAGAGCG
GACAGGGCAGGATACGGGAGTATTGCTCTGCACGGACGTGGCAGCTCGTG
GGCTCGACATCCCCGCCGTGGACTGGATCATACAATACGATCCCCCCGAC
CAATCAGCGGAGTACATCCACAGAGTCGGCCGAACCGCCAGAGGACAGAG
CGGACAGGGCAGGGCTCTCCTGTTTCTTTTGCCGGAGGAGTTGGGCTTCC
TGCGCTACCTTCGAGCGGCGAAGGGCTCTCCTGTTTCTTTTGCCGGAGGA
GTTGGGCTTCCTGCGCTACCTTCGAGCGGCGAAGGCAACGCTTAACGAGT
ACGACTTCCCAGTGAAGAAGGTGGCCAACGTGCAGTCGCAGCTATCCCGC
CTCATCGAGAAGAATTACTACCTCAATAAATCTGCAAGAGAGGCAACGCT
TAACGAGTACGACTTCCCAGTGAAGAAGGTGGCCAACGTGCAGTCGCAGC
TATCCCGCCTCATCGAGAAGAATTACTACCTCAATAAATCTGCAAGAGAG
GCATATCGATCATACCTTCTGGCGTACGCTTCTCATTCGCTCAAAGATAT
CTACGACGTTCACGAGCTGGACTTGCAGGCCGTGGCGAGAGCGTTCGGCT
TCACCGTACCACCACGGGCATATCGATCATACCTTCTGGCGTACGCTTCT
CATTCGCTCAAAGATATCTACGACGTTCACGAGCTGGACTTGCAGGCCGT
GGCGAGAGCGTTCGGCTTCACCGTACCACCACGGGTGGACCTTAAGCTCA
GCGCCAGAGGCCAAAAGGGCCGAGGGGGAGGCAAGGAACGAGATCAAGCA
AGGCGAAAGATGGGATCAAAGGGATCTGGTGGGCACGCATTCAGCGCAAC
AAACCCGTACGGACAGAAAGCGAAGGGAGATGGGAGGCAGTTTAGCCATT
AGGTGGACCTTAAGCTCAGCGCCAGAGGCCAAAAGGGCCGAGGGGGAGGC
AAGGAACGAGATCAAGCAAGGCGAAAGATGGGATCAAAGGGATCTGGTGG
GCACGCATTCAGCGCAACAAACCCGTACGGACAGAAAGCGAAGGGAGATG
GGAGGCAGTTTAGCCATTAG
back to top