mRNA_F-serratus_M_contig1349.2593.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI) HSP 1 Score: 606 bits (1562), Expect = 2.330e-196 Identity = 331/435 (76.09%), Postives = 366/435 (84.14%), Query Frame = 2
Query: 20 PGSTEGSSV--KLVVLALCPEGFVAP-QATQEVFV----EPLQPFSRPLGGNGNVIMKRKGDYDDXXXXXXXXXXXX-------KGFRGAKRGKTLKPGTYGEAAGRTFAVLEVELGNITSLAKTWKKLNAEDLLGGDEAALASAVKTLVEMEATLPSEQHPKGTGTLAPINIASELKVQELRFRENAAELVNVLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 1282
PG+ V K++VL LC EGFV P +AT V EP+ F+RP +GNV+MKRKGD D XXX RG+ +GK LK GTYGEAAGRTFAVLEV LG+I SLAK KKLNAED+LGGD ALASAVKTLVEME+TLPSE+ PKGT T P+N+A+ELKVQE+ FRE++AEL+NVLESRA SQCHTCP ++++YHLQ KR KL++R+ELL HA SSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLE LDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQV+ IA+SLGRLQRDHGLP+DP+EN+KLNLN GLVDVVYEWARGVPF EITQITLVQEGS+VRAITRLDELCREVRN+ARVIGDPTLYRKMEATSQLIKRDIVFAASLYV
Sbjct: 1200 PGAVPAGEVEMKMLVLVLCHEGFVTPAEATSADKVAAESEPIDSFARP---SGNVVMKRKGDDDGGWGGRAGGGXXXXXKAGKASSGRGSAKGKVLKAGTYGEAAGRTFAVLEVGLGDIVSLAKAVKKLNAEDVLGGDSTALASAVKTLVEMESTLPSERDPKGTFT--PVNLANELKVQEIGFRESSAELLNVLESRAASQCHTCPKLSEQYHLQQKRDKLERRIELLGHALSSEALSLFPDFQQRLGVLRSLGYVEGNTVQLKGRVACEINTCDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVLKIARSLGRLQRDHGLPVDPEENIKLNLNLGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLDELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 1629
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A835Z0G0_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0G0_9STRA) HSP 1 Score: 305 bits (781), Expect = 1.330e-96 Identity = 153/220 (69.55%), Postives = 184/220 (83.64%), Query Frame = 2
Query: 629 KRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVEG--NTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 1282
+R++L+ ++ ++ +S+E L LFPDFQQRLGVLR+ GYV+G +TVQLKGRVACE+NT DEL+ TEMVFENVL+ LDPPEIAGILSAL+FQE++ N+PPLT RLQ A A V IA+ LG LQ HGLP PD+ NLNFGLVDVVY+WARGVPF EI QITLVQEG+IVR +TRLDEL REVRN+ARV+GDPTLYRKMEATSQLI+R ++F ASLY+
Sbjct: 6 RRARLRAKIAHVRALTSNERLQLFPDFQQRLGVLRAAGYVDGAGDTVQLKGRVACEVNTADELVVTEMVFENVLQHLDPPEIAGILSALVFQERSDNQPPLTPRLQAARASVEGIARGLGALQAAHGLPTSPDDFAAQNLNFGLVDVVYDWARGVPFAEICQITLVQEGTIVRTVTRLDELLREVRNAARVVGDPTLYRKMEATSQLIRRGVIFCASLYL 225
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A067BDQ4_SAPPC (DSHCT domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BDQ4_SAPPC) HSP 1 Score: 289 bits (739), Expect = 1.110e-85 Identity = 168/343 (48.98%), Postives = 219/343 (63.85%), Query Frame = 2
Query: 263 LKPGTYGEAAGRTFAVLEVELGNITSLAKTWKKLNAEDLL-GGDEAALASAVKTLVEMEATLPSEQHPKGTGTLAPINIASELKVQELRFRENAAELVNVLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVEG-NTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
L PG G G+ + VL+V + L K N LL D + L+ AV+ LV++EA+LP P+ ++LK+ EL + +++ + S C P + K +L+ + + A S+ +LSLFPDFQQRL VL LGY+ NTVQ+KGRVACE+NTC+EL+ TE++FENVL L+P EI +LSALIFQEKTQN+P LT RL A + V IA SLG +Q + L IDP E K LNFGL++VVYEW+RG+PF I ++T V EGSIVR ITRLDE+CREVRN+ARVIGDP LYRKME S+ IKRD+VFA SLY++
Sbjct: 249 LAPGAKGSLLGKHYVVLDVPETCLNKLTKHKASPNVRSLLEANDPSVLSRAVELLVDLEASLPLFLSPQ-----------TDLKMMELESADLYSQVQHQYSVMEASPCFASPFLMPVLAQYAKIDRLRHYMATMTAALSNHSLSLFPDFQQRLRVLTRLGYIASDNTVQVKGRVACEVNTCEELVLTEIIFENVLADLEPEEIVAVLSALIFQEKTQNQPTLTPRLLHAQSTVHAIATSLGVIQLECHLEIDPTEFAKTTLNFGLMEVVYEWSRGMPFKSICELTDVPEGSIVRCITRLDEVCREVRNAARVIGDPRLYRKMEIASESIKRDVVFAGSLYLS 580
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A1V9ZZV5_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZV5_9STRA) HSP 1 Score: 288 bits (737), Expect = 1.290e-82 Identity = 179/419 (42.72%), Postives = 238/419 (56.80%), Query Frame = 2
Query: 35 GSSVKLVVLALCPEGFVAPQATQEVFVEPLQPFSRPLGGNGNVIMKRKGDYDDXXXXXXXXXXXXKGFRGAKRGKTLKPGTYGEAAGRTFAVLEVELGNITSLAKTWKKLNAEDLLGG-DEAALASAVKTLVEMEATLPSEQHPKGTGTLAPINIASELKVQELRFRENAAELVNVLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVE-GNTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
G+S + VL LC GFV P ++ ++ +P + P+ L GT G+ G+ + VLEV I L K N LL D A L+ AV+ L+++ +P P+ S+LK+ EL + +++ + C P + K +L+ + ++ A S+ +LSLFPDFQQRL VL LGY+ NTVQ+KGRVACE+NTC+ELI TE++FENVL L+P EI +LSALIFQEKTQN P LT RL A V IA SLG +Q + L IDP+E V LNFGL++VVYEW+RG+PF I ++T V EGSIVR ITRLDE+CREVRN+ARVIGDP LYRKME ++ IKRD+VFA+SLY++
Sbjct: 511 GTSKTVTVLTLCHAGFVPPAVKKDSAMDFFKPKNAPISTG------------------------------------LAVGTKGQLLGKHYVVLEVPCTCIDKLTKNKANTNVRGLLASMDAAVLSRAVELLIDLGNEVPLFLDPR-----------SDLKMMELETADLYSQVQYQYTLMQSNVCFNSPFLVPVLVQYSKIDRLRHYIAMMTAALSNHSLSLFPDFQQRLRVLTRLGYIATDNTVQVKGRVACEVNTCEELILTEIIFENVLAELEPEEIVAVLSALIFQEKTQNAPTLTPRLVHAQNTVKAIATSLGLIQLECHLEIDPNEYVTTTLNFGLMEVVYEWSRGMPFKSICELTDVPEGSIVRCITRLDEVCREVRNAARVIGDPRLYRKMEIATESIKRDVVFASSLYLS 882
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A812VLV3_SYMMI (SKI2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VLV3_SYMMI) HSP 1 Score: 268 bits (685), Expect = 1.100e-81 Identity = 146/234 (62.39%), Postives = 176/234 (75.21%), Query Frame = 2
Query: 605 TDRYHLQHKRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVEGN---TVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDP----DENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
+D LQHK LQ +V LQ SS+ +LSLFPDFQQRL VL+ LGY+EG+ TV LKGRVACE NT DEL+ATE++F NVLE L+PPE+A LSAL+FQEK + PLT RL+ A +Q V++A +L RLQ + G+ + E V +LNFGL VYEWARGVPF EIT +T EGSIVR ITRLDELCR+ RN+ARV+G+P+LYRKMEATSQ IKRDIVFAASLYV+
Sbjct: 36 SDALSLQHKLHLLQSKVTALQFYSSNASLSLFPDFQQRLRVLQHLGYIEGSDGRTVTLKGRVACEKNTSDELLATEILFFNVLEPLNPPEVASFLSALVFQEKNNEDSPLTSRLELARSQEVSLASALLRLQEESGINMSALGGRGEGVAASLNFGLAAPVYEWARGVPFQEITGMTCTHEGSIVRTITRLDELCRDFRNAARVVGNPSLYRKMEATSQCIKRDIVFAASLYVS 269
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A2P4X498_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X498_9STRA) HSP 1 Score: 271 bits (692), Expect = 1.780e-81 Identity = 159/340 (46.76%), Postives = 218/340 (64.12%), Query Frame = 2
Query: 293 GRTFAVLEVELGNITSLAKTWKK-LNAEDLLG-GDEAALASAVKTLVEMEATLPSEQHPKGTGTLAPINIASELKVQELRFRENAAELVNVLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVEL------LQHASSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
G+ +AVLEV + S+ +N + L+ + LAS+++ L ++E + Q +A +++ ELKV +L + + +S + P TD + K++K +L + S+++LSLFPDFQQRL VL+ LGY+ E VQ+KGRVACEINTC+EL+ TEM+FENVL L+P EI +LSALIFQEK+Q+EP LT L+ V IA+SLG +Q + L IDP K LNFGL++VVYEWARG+PF ++ ++T VQEGSIVR I RLDE+CREVRN+ARVIGDP LYRKME S+ IKRD+VFA+SLY++
Sbjct: 29 GKKYAVLEVPESCVESVTSVVASAVNTKTLVATSSKKELASSIEFLAQLEKDASTTQK----AAIAYVDLMGELKVNDLEVATGYTQWEQM-----YSMVLSHPCATDSPSVSRVMGKVEKIFKLKAYLVRMTRELSNDSLSLFPDFQQRLSVLKRLGYISEDGVVQVKGRVACEINTCEELVLTEMIFENVLANLEPEEIVAVLSALIFQEKSQSEPTLTSTLENTREVVKNIAESLGLIQLEQHLEIDPAVYCKGALNFGLMEVVYEWARGMPFKQLCELTDVQEGSIVRCIMRLDEVCREVRNAARVIGDPQLYRKMEVASEAIKRDVVFASSLYLS 359
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A7S1GQ35_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GQ35_CYCTE) HSP 1 Score: 262 bits (670), Expect = 9.100e-80 Identity = 139/247 (56.28%), Postives = 182/247 (73.68%), Query Frame = 2
Query: 557 VLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVEGN-TVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQN---EPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
V R F+ H P + + Y ++ L+ +++LL+H S+E+L LFPDF QR VL++LGY++ N TV +KGRVACE+NTC+ELIATE+VFE VL L+P EI LS+L+FQEK+ + + L D L ++ TIA +LG+LQ++HGL +DP+E + +L FGLV VVYEWA GVPF I ++TLVQEGSIVR ITRLDELCR+ RN ARV+G+PTLYRKMEA S IKRDIVFA+SLYV+
Sbjct: 3 VFNMRTFASHHH-PAIENHYATLERKETLRSKLDLLRHLLSNESLQLFPDFLQRKSVLKTLGYIDDNETVCVKGRVACEVNTCEELIATEIVFEGVLNDLEPAEIVASLSSLVFQEKSTDSEFDAELPDTLVECCERMKTIAVNLGQLQKEHGLEVDPEEYCEASLKFGLVHVVYEWALGVPFSNICELTLVQEGSIVRCITRLDELCRDFRNCARVVGNPTLYRKMEAASTAIKRDIVFASSLYVS 248
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A225WSS8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSS8_9STRA) HSP 1 Score: 284 bits (726), Expect = 6.690e-79 Identity = 181/437 (41.42%), Postives = 257/437 (58.81%), Query Frame = 2
Query: 2 QGAQTGPGSTEGSSVKLVVLALCPEGFVAPQATQEVFVEPLQPFSRPLGGNGNVIMKRKGDYDDXXXXXXXXXXXXKGFRGAKRGKTLKPGTYGEAAGRTFAVLEVELGNITSLA-KTWKKLNAEDLLGGD-EAALASAVKTLVEMEATLPSEQHPKGTGTLAPINIASELKVQELRFRENAAELVNVLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVEL------LQHASSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
Q + G S +G ++V++LCP+ + P+A V S G+G ++ +K D DD KG ++ L + G+ +AVLEV + S+ +N + L+ + LAS+++ L ++E + Q +A +++ ELKV +L + + +S + P TD + K++K +L + S+++LSLFPDFQQRL VL+ LGY+ E VQ+KGRVACEINTC+EL+ TEM+FENVL L+P EI +LSALIFQEK+Q+EP LT L+ + V IA+SLG +Q + L IDP K LNFGL++VVYEWARG+PF ++ ++T VQEGSIVR ITRLDE+CREVRN+ARVIGDP LYRKME S+ IKRD+VFA+SLY++
Sbjct: 1004 QNSTIGDTSHKGVFKSIMVISLCPDDYEPPKAK----VPKDSKKSPHTLGSGRMLRSKKDDDDDRMFGRMGK----KGKVESQESGELSAPSTATLLGKKYAVLEVPESCVESVTCMVASAVNIKTLVASSSKKELASSIEFLTKLEKDAATTQK----AAIAYVDVMGELKVNDLEVATGYTQWQQM-----YSMVLSHPCATDSPSVSRVMGKVEKIFKLKAYLMRMTQELSNDSLSLFPDFQQRLSVLKRLGYISEDGVVQVKGRVACEINTCEELVLTEMIFENVLANLEPEEIVAVLSALIFQEKSQSEPTLTPTLENSREVVKNIAESLGLIQLEQHLEIDPAVYCKGALNFGLMEVVYEWARGMPFKQLCELTDVQEGSIVRCITRLDEVCREVRNAARVIGDPQLYRKMEVASEAIKRDVVFASSLYLS 1423
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A1V9ZLM2_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM2_9STRA) HSP 1 Score: 283 bits (724), Expect = 8.480e-79 Identity = 168/343 (48.98%), Postives = 218/343 (63.56%), Query Frame = 2
Query: 263 LKPGTYGEAAGRTFAVLEVELGNITSLAKTWKKLNAEDLLGGDEAALAS-AVKTLVEMEATLPSEQHPKGTGTLAPINIASELKVQELRFRENAAELVNVLESRAFSQCHTCPMMTDRYHLQHKRSKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYVE-GNTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
L G G G+ +AVL+V I L K + L+ +A + S AV+ LV++EA LP P+ ++LK+ EL + +++ + A S C P + K +L+ + + A S+ +LSLFPDFQQRL VL LGY+ NTVQ+KGRVACE+NTC+EL+ TE++FENVL L+P EI +LSALIFQEKTQN P LT RL A V IA SLG +Q + L IDP E K LNFGL++VVYEW+RG+PF I ++T V EGSIVR ITRLDE+CREVRN+ARVIGDP LYRKME S+ IKRD+VFA+SLY++
Sbjct: 993 LAAGATGALLGKHYAVLDVPESCIDKLTKHKAAASVRQLVDATDAGVLSRAVELLVDLEAQLPLFLDPR-----------TDLKMLELESADLYSQVSHQYTLMAASPCFASPFLMPVLAQYAKIDRLRLYMATMTAALSNHSLSLFPDFQQRLRVLTRLGYIATDNTVQVKGRVACEVNTCEELVLTEIIFENVLAELEPEEIVAVLSALIFQEKTQNAPTLTPRLLHAQTTVQAIATSLGLIQLECHLEIDPAEYAKSILNFGLMEVVYEWSRGMPFKSICELTDVPEGSIVRCITRLDEVCREVRNAARVIGDPRLYRKMEIASESIKRDVVFASSLYLS 1324
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Match: A0A418AJ68_9STRA (DSHCT domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AJ68_9STRA) HSP 1 Score: 264 bits (674), Expect = 1.050e-78 Identity = 139/218 (63.76%), Postives = 167/218 (76.61%), Query Frame = 2
Query: 635 SKLQKRVELLQHASSSEALSLFPDFQQRLGVLRSLGYV-EGNTVQLKGRVACEINTCDELIATEMVFENVLERLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVVTIAQSLGRLQRDHGLPIDPDENVKLNLNFGLVDVVYEWARGVPFYEITQITLVQEGSIVRAITRLDELCREVRNSARVIGDPTLYRKMEATSQLIKRDIVFAASLYVA 1285
SKL+ V + A S+ +LSLFPDFQQRL VL LGY+ + NTVQ+KGRVACE+NTC+ELI TE++FENVL L+P EI +LSALIFQEKTQ+ LT RL A V IA SLG +Q + L IDP E VK LNFGL++VVYEW+RG+PF I Q+T V EGSIVR +TRLDE+CREVRN+ARVIGDP LYRKME S+ IKRD+VFA SLY++
Sbjct: 151 SKLRNYVAAMTAALSNHSLSLFPDFQQRLQVLTRLGYIAKDNTVQVKGRVACEVNTCEELILTEIIFENVLASLEPEEIVSVLSALIFQEKTQHATTLTPRLMDAQKTVQAIATSLGLIQLEAQLEIDPHEYVKSTLNFGLMEVVYEWSRGMPFQSICQLTDVPEGSIVRCMTRLDEVCREVRNAARVIGDPRLYRKMEIASESIKRDVVFATSLYLS 368 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1349.2593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1349.2593.1 >prot_F-serratus_M_contig1349.2593.1 ID=prot_F-serratus_M_contig1349.2593.1|Name=mRNA_F-serratus_M_contig1349.2593.1|organism=Fucus serratus male|type=polypeptide|length=374bp MKRKGDYDDDHDGWGKGKGTGKGFRGAKRGKTLKPGTYGEAAGRTFAVLEback to top mRNA from alignment at F-serratus_M_contig1349:66670..72213+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1349.2593.1 ID=mRNA_F-serratus_M_contig1349.2593.1|Name=mRNA_F-serratus_M_contig1349.2593.1|organism=Fucus serratus male|type=mRNA|length=5544bp|location=Sequence derived from alignment at F-serratus_M_contig1349:66670..72213+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1349:66670..72213+ >mRNA_F-serratus_M_contig1349.2593.1 ID=mRNA_F-serratus_M_contig1349.2593.1|Name=mRNA_F-serratus_M_contig1349.2593.1|organism=Fucus serratus male|type=CDS|length=2244bp|location=Sequence derived from alignment at F-serratus_M_contig1349:66670..72213+ (Fucus serratus male)back to top |