mRNA_F-serratus_M_contig1349.2591.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1349.2591.1
Unique NamemRNA_F-serratus_M_contig1349.2591.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: D7FIJ0_ECTSI (Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ0_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 1.280e-93
Identity = 131/179 (73.18%), Postives = 156/179 (87.15%), Query Frame = 3 
Query:   96 AEAMENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEPRA 632
            A + + +YVKT  GD+V +KA ++G  NL+L G+SIIMPG I+RGELQ IRIGRYCV+GEGTVIRPAYR+EQ+ S LKCRFTP++VGSHT IGK CVVE+AGIGCNVRIEDGC+LGRNSFVRDNC LL G+VLPEGAVVPPFTV+ GCPA+ V+VLHEST ++W ED+V+FYETFEP A
Sbjct:    2 AGSAQEEYVKTRDGDIVFKKAHVHGLHNLFLMGRSIIMPGVIIRGELQEIRIGRYCVVGEGTVIRPAYRIEQEESNLKCRFTPLSVGSHTYIGKSCVVESAGIGCNVRIEDGCVLGRNSFVRDNCHLLPGTVLPEGAVVPPFTVLQGCPARMVSVLHESTPSVWTEDAVNFYETFEPSA 180
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A7S1ZJQ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJQ9_TRICV)

HSP 1 Score: 158 bits (400), Expect = 1.710e-43
Identity = 74/172 (43.02%), Postives = 118/172 (68.60%), Query Frame = 3 
Query:  108 ENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQS-IRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETF 620
            E  Y+KT+  + VSR A I+GS+++ ++GKS++ PGA+VRG+L + +R+GRYC +G+ +V+RP      DG++   R  P ++G+HT IG+DCVVEAA +G +V + DGC+LG+ S ++D C++  G+VL   AVVPPF++++G P + V  + ES     P+ S+  Y  F
Sbjct:   18 EEGYIKTAANNYVSRSASIHGSRHVEIRGKSVVRPGAVVRGDLGAPVRVGRYCRVGDRSVLRPPSASLPDGTE---RRLPQSIGNHTSIGRDCVVEAAAVGFSVLVGDGCVLGKRSVIKDCCRIEPGTVLAPDAVVPPFSIVSGSPGRVVGEMPESAAAEIPDRSLGEYAAF 186
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A0N4UAM7_DRAME (Uncharacterized protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4UAM7_DRAME)

HSP 1 Score: 155 bits (391), Expect = 2.670e-42
Identity = 73/171 (42.69%), Postives = 114/171 (66.67%), Query Frame = 3 
Query:  108 ENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETF 620
            + ++V+T+TG+ V++K++++GSQN+ L GKSI+M   I+RG++ SIR G+YCV+GE TVIRP+Y+    G      F PV +G H  I  DC++ AA IG  V I  G I+GR+  ++D  Q+L  + +P  AV+PPF++++G P   +  L EST N+  + + SFY+ F
Sbjct:   10 KQEFVETATGNKVNKKSRLFGSQNIVLNGKSILMKDCILRGDMNSIRAGKYCVVGERTVIRPSYKRFSKG----LTFFPVHIGDHVFIENDCIIMAAQIGAFVHIGSGAIVGRSVIIKDCVQVLPNAFVPHDAVIPPFSIVSGNPGTIIGELPESTQNLMTQATRSFYDNF 176
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A7S2V2Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q0_9STRA)

HSP 1 Score: 148 bits (374), Expect = 6.750e-40
Identity = 69/175 (39.43%), Postives = 114/175 (65.14%), Query Frame = 3 
Query:  108 ENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEPRA 632
            + ++++T+T +LVS+K +I     + + GK+I+M G I+RG+L  + +GRYC +G  T+IRPA ++ ++ +     F  V +G +T IG+DC++EAA IG NV+     +LG+ S VRD C+L +G+VL  GAVVPPF+V+AGCP +  + L E++   +   +   Y+ F+  A
Sbjct:    9 KEEFIRTTTNNLVSKKVRISSPNFVKITGKTILMHGVIIRGDLAKVEMGRYCEVGANTIIRPALKISEEPT-----FADVKIGDNTRIGEDCIIEAAWIGTNVQXXXXXVLGKGSLVRDCCRLEDGTVLAPGAVVPPFSVVAGCPGRVTSELPENSPEEFSHAAQDSYKKFKETA 178
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A0L0DIQ2_THETB (Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIQ2_THETB)

HSP 1 Score: 148 bits (374), Expect = 7.610e-40
Identity = 69/171 (40.35%), Postives = 115/171 (67.25%), Query Frame = 3 
Query:  114 DYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEP 626
            ++++T++G+ VSR + + GSQN+ L GKS+++PG+I+RG+L ++RIGRYCVI +  V+RPAY+    G      +  +++G    +GKD VVEAA IG +V I +G I+ + + + D C++L G+V+PE AV+PPF++  G PA  +  L E+   +  E + + YE++ P
Sbjct:   10 EWIETASGNKVSRASVLCGSQNIILNGKSLVLPGSIIRGDLAAVRIGRYCVISDRVVLRPAYKALPKG----LNYFQLSLGDCVYVGKDAVVEAASIGSHVIIGEGAIVSKRAVILDCCEILPGAVVPEDAVIPPFSIYGGNPAVLIGELTEAAQRVHEEKAFACYESYVP 176
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A0N4UWP5_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UWP5_ENTVE)

HSP 1 Score: 148 bits (373), Expect = 1.140e-39
Identity = 76/170 (44.71%), Postives = 112/170 (65.88%), Query Frame = 3 
Query:  120 VKTSTGDLVSRKA-QIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEP 626
            V+T+TG+ VSR+   ++GS N+ L GKSIIM G I+RG+L S+RIG+YCVIGE ++IRP+++    G      + PV +G +  I  DCVV AA IG  V I    I+GR++ ++D  Q+L  +V+P+ AV+PPF+++ G PA  V  L  ST ++  + + SFYE F P
Sbjct:   14 VETATGNKVSRRGTHLFGSTNIVLSGKSIIMDGCILRGDLNSVRIGKYCVIGERSIIRPSFKAFSKG----LTYFPVHIGDYVFIENDCVVMAAQIGSFVHIGSNAIIGRSTVLKDCVQILPDAVIPQDAVIPPFSIVGGNPAVIVGELPPSTQDLMMQANKSFYENFVP 179
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: L8GIW5_ACACA (Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIW5_ACACA)

HSP 1 Score: 146 bits (369), Expect = 7.960e-39
Identity = 76/174 (43.68%), Postives = 110/174 (63.22%), Query Frame = 3 
Query:  108 ENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEPR 629
            ++++++T TG+ V RK+ + GSQN+ L GK+++MPGA++RG+L ++ +G+Y VIG   VIRPA++  Q GS     F PV +G    I +DC+V A  IG  V +  G +LGR+S ++D C + EGSVL  G VVPPFT+  G PA     L E    M  E S+  Y TF P+
Sbjct:   14 KSEFIETHTGNKVGRKSILCGSQNIRLHGKTVVMPGAMIRGDLGAVNVGKYSVIGRNVVIRPAHKRYQ-GS---VAFFPVTIGDFVHIEEDCIVSATSIGSYVHVGRGAVLGRHSVLKDCCWVEEGSVLAPGTVVPPFTIFGGSPAVQKGQLPECFQEMQKEASLINYNTFLPQ 183
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A7S3QBQ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBQ9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.400e-38
Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = 3 
Query:  108 ENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRP-AYRVEQDGS-------------QLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAV--AVLHESTVNMWPEDSVSFYETF 620
            E  YVKT+  + VSRKA I+G++N+ +KGKSI+ P   +RG+ Q++RIGRYC IGEG+++RP +Y+   D S             +   +F P+ VGSHT IGK CV+EAA +G +V I D C++ +   ++D C +  G+V+ +  V+PPF+ +AGCP   +   ++ ES      +D V  +  F
Sbjct:   44 EEGYVKTAAYNYVSRKAFIHGAKNVEMKGKSIVHPKVHIRGDFQTVRIGRYCHIGEGSILRPPSYQASLDTSHEGASENGENEEEKQLIKFLPLIVGSHTQIGKGCVIEAAAVGSSVYIGDNCVISKRVIIKDCCYIASGTVIAQDTVIPPFSRVAGCPGGMIENGLMAESITTTSVDDCVEQFNEF 230
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A3S1H5M8_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1H5M8_ELYCH)

HSP 1 Score: 144 bits (364), Expect = 2.360e-38
Identity = 65/172 (37.79%), Postives = 112/172 (65.12%), Query Frame = 3 
Query:  111 NDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEP 626
            + Y++T++G+ VSR++ + GSQN+ + GK+I+M G ++RG+L ++RIGR+C+I    VIRPA++    G      F P+ +G H +I ++ VV AA +G  V I   C++GR + ++D C + + ++LP  AVVPPFT+ +G P K  + L + T ++  + +V++Y  F P
Sbjct:   11 SQYIETASGNKVSRQSVLCGSQNIVINGKTIVMTGCVIRGDLANVRIGRHCIISNNAVIRPAFKRFSKG----VAFFPLHIGDHVLIEENSVVNAAQVGSFVHIGKNCVIGRRAVLKDCCAIADNTILPPEAVVPPFTLCSGSPGKLTSELPDCTQDLMTDITVNYYHHFRP 178
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BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Match: A0A0K0JQM9_BRUMA (BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 RepID=A0A0K0JQM9_BRUMA)

HSP 1 Score: 144 bits (363), Expect = 3.320e-38
Identity = 69/173 (39.88%), Postives = 108/173 (62.43%), Query Frame = 3 
Query:  108 ENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGELQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDCVVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMAGCPAKAVAVLHESTVNMWPEDSVSFYETFEP 626
            +++YV+T+TG+ V+RK++++GSQN+ L GKS +M   I+RG++ +IR GRYCV+GE T+IRP+Y+    G      F PV +G H  IG DC+V AA IG  V          +  ++   Q+L  +V+P  AV+PPF+++ G P   +  L EST  +  + + +FY+ F P
Sbjct:    6 KSEYVETATGNKVNRKSRLFGSQNIVLNGKSTLMKDCILRGDMHNIRTGRYCVVGERTIIRPSYKRFSKG----LTFFPVHIGDHVFIGNDCIVMAAEIGAFVHXXXXXXXXXSVIIKSCVQVLPNTVVPHDAVIPPFSIVGGNPGTVIGHLPESTQELMTQATRNFYDNFVP 174
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1349.2591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIJ0_ECTSI1.280e-9373.18Dynactin 4 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S1ZJQ9_TRICV1.710e-4343.02Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A0N4UAM7_DRAME2.670e-4242.69Uncharacterized protein n=1 Tax=Dracunculus medine... [more]
A0A7S2V2Q0_9STRA6.750e-4039.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0L0DIQ2_THETB7.610e-4040.35Dynactin subunit 5 n=1 Tax=Thecamonas trahens ATCC... [more]
A0A0N4UWP5_ENTVE1.140e-3944.71Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
L8GIW5_ACACA7.960e-3943.68Dynactin 4 isoform 2, putative n=1 Tax=Acanthamoeb... [more]
A0A7S3QBQ9_9STRA1.400e-3839.57Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A3S1H5M8_ELYCH2.360e-3837.79Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A0K0JQM9_BRUMA3.320e-3839.88BMA-DNC-5 n=14 Tax=Spiruromorpha TaxID=2072716 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1349contigF-serratus_M_contig1349:37896..42042 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue7.6e-76
Seed eggNOG ortholog2880.D7FIJ0
Preferred nameDCTN5
KEGG koko:K10427
KEGG Pathwayko04962,map04962
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001568,GO:0001944,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003205,GO:0003231,GO:0003279,GO:0003281,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005869,GO:0005875,GO:0005886,GO:0006810,GO:0006888,GO:0006928,GO:0007017,GO:0007018,GO:0007275,GO:0007276,GO:0007283,GO:0007507,GO:0008088,GO:0008090,GO:0008150,GO:0009987,GO:0010970,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016192,GO:0019882,GO:0019884,GO:0019886,GO:0019953,GO:0022414,GO:0030705,GO:0031090,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0035904,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046907,GO:0048002,GO:0048193,GO:0048232,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0060840,GO:0060976,GO:0070013,GO:0071944,GO:0072358,GO:0072359,GO:0098930,GO:0099111
EggNOG free text desc.aorta development
EggNOG OGsKOG3121@1,KOG3121@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Exons5
Model size1092
Cds size555
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929327.6017308-UTR-F-serratus_M_contig1349:37895..383491622929327.6017308-UTR-F-serratus_M_contig1349:37895..38349Fucus serratus maleUTRF-serratus_M_contig1349 37896..38349 -
1690962800.978071-UTR-F-serratus_M_contig1349:37895..383491690962800.978071-UTR-F-serratus_M_contig1349:37895..38349Fucus serratus maleUTRF-serratus_M_contig1349 37896..38349 -
1622929327.6745985-UTR-F-serratus_M_contig1349:41959..420421622929327.6745985-UTR-F-serratus_M_contig1349:41959..42042Fucus serratus maleUTRF-serratus_M_contig1349 41960..42042 -
1690962801.0769515-UTR-F-serratus_M_contig1349:41959..420421690962801.0769515-UTR-F-serratus_M_contig1349:41959..42042Fucus serratus maleUTRF-serratus_M_contig1349 41960..42042 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929327.6183865-CDS-F-serratus_M_contig1349:38349..384601622929327.6183865-CDS-F-serratus_M_contig1349:38349..38460Fucus serratus maleCDSF-serratus_M_contig1349 38350..38460 -
1690962800.9915025-CDS-F-serratus_M_contig1349:38349..384601690962800.9915025-CDS-F-serratus_M_contig1349:38349..38460Fucus serratus maleCDSF-serratus_M_contig1349 38350..38460 -
1622929327.6303391-CDS-F-serratus_M_contig1349:39255..393421622929327.6303391-CDS-F-serratus_M_contig1349:39255..39342Fucus serratus maleCDSF-serratus_M_contig1349 39256..39342 -
1690962801.0080068-CDS-F-serratus_M_contig1349:39255..393421690962801.0080068-CDS-F-serratus_M_contig1349:39255..39342Fucus serratus maleCDSF-serratus_M_contig1349 39256..39342 -
1622929327.6403832-CDS-F-serratus_M_contig1349:39561..397001622929327.6403832-CDS-F-serratus_M_contig1349:39561..39700Fucus serratus maleCDSF-serratus_M_contig1349 39562..39700 -
1690962801.0276167-CDS-F-serratus_M_contig1349:39561..397001690962801.0276167-CDS-F-serratus_M_contig1349:39561..39700Fucus serratus maleCDSF-serratus_M_contig1349 39562..39700 -
1622929327.650921-CDS-F-serratus_M_contig1349:40158..402621622929327.650921-CDS-F-serratus_M_contig1349:40158..40262Fucus serratus maleCDSF-serratus_M_contig1349 40159..40262 -
1690962801.0490565-CDS-F-serratus_M_contig1349:40158..402621690962801.0490565-CDS-F-serratus_M_contig1349:40158..40262Fucus serratus maleCDSF-serratus_M_contig1349 40159..40262 -
1622929327.6618874-CDS-F-serratus_M_contig1349:41845..419591622929327.6618874-CDS-F-serratus_M_contig1349:41845..41959Fucus serratus maleCDSF-serratus_M_contig1349 41846..41959 -
1690962801.0645623-CDS-F-serratus_M_contig1349:41845..419591690962801.0645623-CDS-F-serratus_M_contig1349:41845..41959Fucus serratus maleCDSF-serratus_M_contig1349 41846..41959 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1349.2591.1prot_F-serratus_M_contig1349.2591.1Fucus serratus malepolypeptideF-serratus_M_contig1349 38350..41959 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1349.2591.1

>prot_F-serratus_M_contig1349.2591.1 ID=prot_F-serratus_M_contig1349.2591.1|Name=mRNA_F-serratus_M_contig1349.2591.1|organism=Fucus serratus male|type=polypeptide|length=185bp
MATGAEAMENDYVKTSTGDLVSRKAQIYGSQNLYLKGKSIIMPGAIVRGE
LQSIRIGRYCVIGEGTVIRPAYRVEQDGSQLKCRFTPVAVGSHTMIGKDC
VVEAAGIGCNVRIEDGCILGRNSFVRDNCQLLEGSVLPEGAVVPPFTVMA
GCPAKAVAVLHESTVNMWPEDSVSFYETFEPRAS*
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mRNA from alignment at F-serratus_M_contig1349:37896..42042-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1349.2591.1 ID=mRNA_F-serratus_M_contig1349.2591.1|Name=mRNA_F-serratus_M_contig1349.2591.1|organism=Fucus serratus male|type=mRNA|length=4147bp|location=Sequence derived from alignment at F-serratus_M_contig1349:37896..42042- (Fucus serratus male)
CACCTCTCTCGACGAAGAAAACCAGATGCCGACGACGTAGACAAACTTGA
GACTAATCGACATCAGCAGTAGTAATCCTACAAATGGCGACTGGAGCAGA
AGCGATGGAAAATGATTACGTGAAGACGAGTACCGGTGACCTAGTCAGTC
GCAAAGCTCAGATCTACGGCTCACAAAATTTGTACCTCAAGGGGAAGGTA
TGCGCGTTGGTCAAGCACGAACGCCTTGGTCGACCCACACTTATCTACAG
CTATTATCCTCGCTGGGTAACAATGGTCCCATCTGATGCTCGGGTTATGC
CCGTATTAATATGATACGTAGGGTCGTGAAAAGTTGGCTTAAAGCTCAAA
TACACCGAACACGGCAGGTCCTCTTTTGTACTTGAGCATTACAGACAACA
GTACGCGTTTGGATCCTGATGTTATGATGATTGGTTCGTAATCCCTCCGC
GTTAGGAGACGAATCTAGAGTCTAATTAGGCGTTTTATCATAATTTCGTA
AAGATGACAGTGCCGTATGGGACCTTAGTCTTGTCCCCCGTCTGGTTAGA
ACTCTTCCTGCCCCGTAATCAAGAACGCAACGTGATAAGAGAAAGAGACT
TGAGATTAACTCCCGCGCAACAGCAAGCCACCTCCATCGAGTAACGGAAC
CTACCCGTGAGTACCCATATATAGCTCTATATAATATTGGCGTCGACGGT
AGGACAAACCGGTCGCCTCGGTGGTTCGGTCGGTAACCTCGAAACCTTCT
GACGTTGGGGCGTGAGTTCGAATCTCGGTGCAGTCGCACGAACTGGATTT
TCCTCCCCAAAAAAGACAAAAAAAAAAACACATGCCCAACAAGTAGAGAA
CGATTAATTTTTGAGGTGAACGAGATTCGACTTCACGGTCGACGAGGCAA
AGGGGCGGCTGAATCCTTCTCGCGATTAAAATCAAGGCAAGCACCGCAAA
AGGAAAGTGGAGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCCT
GTGCGTCCACAACTCTGACGTCCAGAATAAATGAGATGAAAAACACTCAC
AAACACAGACTGTTTTGATCGACGTACAAAAATATGTTACGCCCTCGATA
CCGCACATGCGCACTGTACCAGTAGAGGGTGTGGGAATATAGAGGCGCCC
ATGATTTATAATAGTCCATGGGGTTACCTCGCTAGGCAGCACCCGTTTCT
CGAGCTACCTTGAGGACTACTGGCCCTCCTGTGCCGGCGGACTCTCGTCG
GTGAACGCCATTACTACGCCGTTGCGTTACAGACCTGATAAACTCGGGAC
TGACCCAATGGCGGCTGAAGATGTAGATTGACACCGTCACGGAAAGCAGG
AGGAAAAAGATGAGCCAATGAGTAAGCACCAGAACCAGATTCAGCCTGGG
TATGGAGGATGGGTGGGCGTACGCGGGACGGGACGGCCGAACTTGTGTCG
TGAGACCAAATTCTCAGGCGCGAAGGGGGACAGGGGATCTTCATTTTCCC
TGTGTTCAGCTGACCATAAAAAGGATTGGCAGCCATATCCGGCTGGTCCC
CAATTTACTGAAGGGCATTGCTACATACACACACACAAGCACGATTATAG
AGTAGTTACGTTTCAAAAGAAGACCATTAGTCCGCGCATCGCTCCCTTAA
AAGATCGAGATCGTCCATTATCACCTTGAGCTGCTGTGCGCTATTAATAG
CTGTACTCCATGTGCCGTACCTCACTTGCGACGTGCGACACGCTTCGACT
ATTATATTATACTATCTGTCCTATTCGCAGAGTATTATAATGCCGGGAGC
AATCGTGCGTGGGGAGCTGCAGTCCATCCGGATAGGTCGATATTGTGTCA
TCGGGGAAGGAACCGTCATTCGACCAGCCTACAGGTGGGCGTGTTCCCCT
GTTGGTGAACATTTGTCCGTGCTGCGTTGGTAGAGGCTAGACATAATATG
TCGAGCCAACATTGTGGCAACAGCGCTTTTTGTGTGACGTACCGAACCGA
GTCATGCACACAGCTGCGAGTCATGCACACAGCTGCCCAATCAACTTTAG
CGCGGTATGGCTTCCCTGCAGTTTGAGCTACCGGTAAAGAGGGCCAAGTC
TCGTTGCAGAAGTTGGAAGTGATGGCTGCTTTGTATTAATAATATGCAAG
GCGAGTATATTTCTAGTCTACCTGTCTACCTGTAGTGCTTGCAGAAACTT
TCACCTCTCTTTCCGAGAAATGGTCACGCCGAACGGGTAGCATGGAATGG
GAAAGAACAAAGAACAACGACATTGTGGGGACGTACCACGCGGAACAAAA
CGTATGTTGATGTTGTTGTTTCCCACTCGCGACTATTGCCAGGGTCGAAC
AAGATGGCTCGCAGCTCAAGTGTCGCTTCACCCCGGTTGCAGTGGGCAGC
CACACCATGATTGGAAAGGACTGCGTCGTAGAAGCGGCTGGGATCGGGTG
CAACGTCCGCATCGAGGATGGATGCATCTTGGTAAGCTATGCGACGACAG
GAAGATCCGTAGAACTCTAGTGATCAACTTGTGGTGAGGTGTAGAAACCC
CTAGAACTCGAATGCCTTAGGTACTCTTTAGGCACCTCTGGTGTTTTGCA
AGCTAATGCGCACAGGTTGCTCTGTTTTTAGTCTGCAAGACCGTTTGTAA
AGCTAATGCGCCCAGAGCTTCACCCTCCATCCACCGTGCCTCACTGGCAG
GGACGTAATAGTTTCGTGCGAGATAACTGTCAACTTTTGGAGGGCAGTGT
TCTTCCGGAAGGCGCCGTTGTGCCCCCCTTTACAGTGGTGAGATATTCAG
ACATTGAGACTATTAATATTAATACTGTAAAAAGAAACACCAGGTACTGT
ACAACACACTGAAAAGCACCAGTTTCGACGTACACAGGGGCAACAGGTTG
AATTTGTTGAAATCATGGCCGAAAACTGGTTGTACTTTAGCTGGATCGAC
CTCCTCACGATCGGTGGGGACAGGAGTATGTCGTGTCGTGTTTAAATAAT
ACGTTGAATTTGGCGCGTTGAATCTGATGGGTAATCGCCTTGACACAGTG
CTGATAACGCGGGAACGAACCTCGCAAATATTACTATATGTTCTATGTAT
GGTCACACATATAGCAAGAGTATGGATCAACCGGGTAAGGTTTCCAATCC
TGCTCGTTGTCAGCTGAACAGGAAAAATTAATGTTCGCGCCTGAGAATTT
GGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTTTTC
TCCATACTCAGGCTGAATATGGTGCTTACTTACGGGATTCCTCCCGAATT
CCGCGGCGGCGTCCAATTATTTATTTAGAAACCGCCATACGCCATCGGGC
CAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCATTCACTG
CCGAGAGTCCGCCGGCACAGGGCCAATAAACCTCAAGGTAGTTCCGAACG
AGTGCTGGCTTGGCAAATCACCATGGACCAGTTAGTATGCGCCTCTCTTT
CCCACACCCACTATTGGTATACACATCGCCGATTGCCTCACCCCTGAGTG
ATCCGCTCCTCTTTTTCCTTTCTTCGCTCCAGATGGCAGGTTGCCCTGCT
AAGGCGGTAGCGGTTTTGCACGAGAGCACAGTGAATATGTGGCCGGAGGA
CTCCGTTAGCTTCTACGAAACCTTTGAACCGAGAGCAAGTTAACTTGAGA
GGTTTAGAGTACCACAGTATGGTCATCACAGTAAGCGTCACCGTCTCTCA
CTGGCTATTCATATCTTCAAATCCGACCTGGCCATTCATGTCCCACTTGC
TTTGTCACTAAGATGACAAGTTCGCTGATGGAATTTGTTGCACGGGAACT
CGGCGAGCTTGAAAAGCTGTCGTAGCTCTCAAGTCTCAGCTGAGTTGGAA
GTATCCGCACGATCAGATTTCACTGGAGTAGGATAATTTTTGGTGTTGTT
CTTCAAACGGTTTCAAAAGTCTCTTCCAAAAGTGTCTACCAGTGTTTGTT
TGTTTGTTGGTGTATCAAGCTGATATTTCTATTATTTAATACCCGGTAGT
AGGTTAACATTCCCACCTATTAATAGTATACCAGGTACTGCTTGGTTGCC
CATCCCGCATGTGGTCTGTCTCTGAGGAATCAACCCATCTTTTCCCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1349:37896..42042-

>mRNA_F-serratus_M_contig1349.2591.1 ID=mRNA_F-serratus_M_contig1349.2591.1|Name=mRNA_F-serratus_M_contig1349.2591.1|organism=Fucus serratus male|type=CDS|length=1110bp|location=Sequence derived from alignment at F-serratus_M_contig1349:37896..42042- (Fucus serratus male)
ATGGCGACTGGAGCAGAAGCGATGGAAAATGATTACGTGAAGACGAGTAC
CGGTGACCTAGTCAGTCGCAAAGCTCAGATCTACGGCTCACAAAATTTGT
ACCTCAAGGGGAAGATGGCGACTGGAGCAGAAGCGATGGAAAATGATTAC
GTGAAGACGAGTACCGGTGACCTAGTCAGTCGCAAAGCTCAGATCTACGG
CTCACAAAATTTGTACCTCAAGGGGAAGAGTATTATAATGCCGGGAGCAA
TCGTGCGTGGGGAGCTGCAGTCCATCCGGATAGGTCGATATTGTGTCATC
GGGGAAGGAACCGTCATTCGACCAGCCTACAGAGTATTATAATGCCGGGA
GCAATCGTGCGTGGGGAGCTGCAGTCCATCCGGATAGGTCGATATTGTGT
CATCGGGGAAGGAACCGTCATTCGACCAGCCTACAGGGTCGAACAAGATG
GCTCGCAGCTCAAGTGTCGCTTCACCCCGGTTGCAGTGGGCAGCCACACC
ATGATTGGAAAGGACTGCGTCGTAGAAGCGGCTGGGATCGGGTGCAACGT
CCGCATCGAGGATGGATGCATCTTGGGTCGAACAAGATGGCTCGCAGCTC
AAGTGTCGCTTCACCCCGGTTGCAGTGGGCAGCCACACCATGATTGGAAA
GGACTGCGTCGTAGAAGCGGCTGGGATCGGGTGCAACGTCCGCATCGAGG
ATGGATGCATCTTGGGACGTAATAGTTTCGTGCGAGATAACTGTCAACTT
TTGGAGGGCAGTGTTCTTCCGGAAGGCGCCGTTGTGCCCCCCTTTACAGT
GGGACGTAATAGTTTCGTGCGAGATAACTGTCAACTTTTGGAGGGCAGTG
TTCTTCCGGAAGGCGCCGTTGTGCCCCCCTTTACAGTGATGGCAGGTTGC
CCTGCTAAGGCGGTAGCGGTTTTGCACGAGAGCACAGTGAATATGTGGCC
GGAGGACTCCGTTAGCTTCTACGAAACCTTTGAACCGAGAGCAAGTTAAA
TGGCAGGTTGCCCTGCTAAGGCGGTAGCGGTTTTGCACGAGAGCACAGTG
AATATGTGGCCGGAGGACTCCGTTAGCTTCTACGAAACCTTTGAACCGAG
AGCAAGTTAA
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