mRNA_F-serratus_M_contig1348.2589.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1348.2589.1
Unique NamemRNA_F-serratus_M_contig1348.2589.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1348.2589.1 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.000e-36
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 1 
Query:  229 PNEYEAFFNTACKSGVAVMSKLSPEERAQRALEGEELEDKIIEIATVLREKADTMVADTGAVNFNIIQPMIDEISVLKAKYKLVVGAVTPTDSPPQDGA 525
            PNEYEAFFN A + G      L+PEERAQRA+EGE+LED+IIEIATVLREKAD MVA+TGA+NF IIQPMIDEI+VLK+KYK+V+GA    D    DGA
Sbjct:    2 PNEYEAFFNKASRLGADATRDLAPEERAQRAMEGEKLEDEIIEIATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMGATETADG---DGA 97
[Close]
BLAST of mRNA_F-serratus_M_contig1348.2589.1 vs. uniprot
Match: A0A835YIM3_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.620e-12
Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 1 
Query:  292 LSPEERAQRALEGEELEDKIIEIATVLREKADTMVADTGAVNFNIIQPMIDEISVLKAKYKLVVGAVTPTDSP 510
            +S EER + A+ GEELED+I+  AT LR+ AD+MV  TGAV+   ++P+IDEI  LK +Y+ V+G V  +++P
Sbjct:    1 MSIEERTRLAIIGEELEDEIMSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP 73
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1348.2589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKG2_ECTSI2.000e-3669.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIM3_9STRA3.620e-1249.32Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1348contigF-serratus_M_contig1348:239829..251412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-12_002180.1
Exons3
Model size527
Cds size498
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1348.2589.1prot_F-serratus_M_contig1348.2589.1Fucus serratus malepolypeptideF-serratus_M_contig1348 239829..251385 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929327.3576772-CDS-F-serratus_M_contig1348:239828..2398801622929327.3576772-CDS-F-serratus_M_contig1348:239828..239880Fucus serratus maleCDSF-serratus_M_contig1348 239829..239880 -
1690962800.8368068-CDS-F-serratus_M_contig1348:239828..2398801690962800.8368068-CDS-F-serratus_M_contig1348:239828..239880Fucus serratus maleCDSF-serratus_M_contig1348 239829..239880 -
1622929327.3754468-CDS-F-serratus_M_contig1348:240301..2404471622929327.3754468-CDS-F-serratus_M_contig1348:240301..240447Fucus serratus maleCDSF-serratus_M_contig1348 240302..240447 -
1690962800.8481293-CDS-F-serratus_M_contig1348:240301..2404471690962800.8481293-CDS-F-serratus_M_contig1348:240301..240447Fucus serratus maleCDSF-serratus_M_contig1348 240302..240447 -
1622929327.3903232-CDS-F-serratus_M_contig1348:251085..2513851622929327.3903232-CDS-F-serratus_M_contig1348:251085..251385Fucus serratus maleCDSF-serratus_M_contig1348 251086..251385 -
1690962800.8580346-CDS-F-serratus_M_contig1348:251085..2513851690962800.8580346-CDS-F-serratus_M_contig1348:251085..251385Fucus serratus maleCDSF-serratus_M_contig1348 251086..251385 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929327.4051034-UTR-F-serratus_M_contig1348:251385..2514121622929327.4051034-UTR-F-serratus_M_contig1348:251385..251412Fucus serratus maleUTRF-serratus_M_contig1348 251386..251412 -
1690962800.8672469-UTR-F-serratus_M_contig1348:251385..2514121690962800.8672469-UTR-F-serratus_M_contig1348:251385..251412Fucus serratus maleUTRF-serratus_M_contig1348 251386..251412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1348.2589.1

>prot_F-serratus_M_contig1348.2589.1 ID=prot_F-serratus_M_contig1348.2589.1|Name=mRNA_F-serratus_M_contig1348.2589.1|organism=Fucus serratus male|type=polypeptide|length=166bp
MYVPLLVSCLVLASGLVHAFGGGWVPFAQNGLQGRQAEAWTSRSRDAVNA
AALRLPQRSVPHRFRAHPNEYEAFFNTACKSGVAVMSKLSPEERAQRALE
GEELEDKIIEIATVLREKADTMVADTGAVNFNIIQPMIDEISVLKAKYKL
VVGAVTPTDSPPQDGA
back to top

mRNA from alignment at F-serratus_M_contig1348:239829..251412-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1348.2589.1 ID=mRNA_F-serratus_M_contig1348.2589.1|Name=mRNA_F-serratus_M_contig1348.2589.1|organism=Fucus serratus male|type=mRNA|length=11584bp|location=Sequence derived from alignment at F-serratus_M_contig1348:239829..251412- (Fucus serratus male)
CAGATACTTTTGCTGTACAGTTCACTGATGTATGTGCCGTTATTGGTGAG
TTGCCTGGTTCTAGCTTCAGGGCTGGTACATGCCTTCGGTGGAGGATGGG
TCCCTTTTGCTCAGAACGGCTTGCAAGGTCGACAAGCAGAAGCATGGACA
TCACGATCACGCGACGCAGTTAATGCGGCAGCGTTGAGGTTACCCCAGCG
ATCAGTACCGCATAGATTCCGCGCCCATCCCAACGAGTACGAGGCATTCT
TTAATACGGCCTGCAAGTCGGGTGTAGCAGTGATGAGTAAGCTCTCCCCT
GAGGAGCGCGCTCAGAGGGCACTTGAGGTGAGCATGGTACGTAGTGACGG
TACGTAGTGATGTTTTGGACGCCAAGCTCCGACAAGCGGCGGAATACTTC
TGAAAAGCCGTGTTCAACGTTCGAAAAAACCATACCAGTAGACTACAAAA
AATATTTAGTCTACACACATAGATCATGAAGAAAAAAACAGAAAAATGTT
TCGGTTTTGGTGCATCTTAACCTCATCCCCCAGAAAGGGGGAAAGATGTC
AAAAACTTTTGGGTGGGAACCTAGGCCGCAAAGACAAAAATCTCTTCATG
GCATTTAATCGGGTTCCCCGATGGTGGTAACATAGGGTCAACAGTATCAT
GTCGGGGAGAAACCCACCGTTGTACACTTACCTTAACCGCCACGCAGGGA
CACCAAGCAAGCAAAACAGAGACAAATGGCACAATGAACCTTGGTACAGC
TCCATTTGGTTACAGACAGTGGGTCTAGTATCGGATGGGTGTCAGCACAA
GTATATACATGGTATTTACAGTTGACCACTAGGATTATTTAAAGCATCTA
AACCTTCTGAGTATCCCCCATACAGGGGGAACAAATCGTTTAGGTGGGAA
CATAGGGTGCTAAGGCAGAACCTCTTCATAGCATTTAATCGGATTCCCCG
ATGGTAGTAACATAGGGTCAACGCTATAATGTCTGGGAGAAACCCACCGT
TATACTGTACGCATACATTAATCGCCATGCAGGGACACCAAAAACAGCGT
TACTACAGGTGACCAGAGGCTTAGATATACCCTCTCGAACTTGACATGCC
CCCGATACTGTCTGTCTTGCACGTGCCCTCTACTCCGTACCGACAGTCTA
ATAATATTATTATAATAGTATATAATAGTGGGAATTGGAAAAGAGGGGTG
CTCATTAACTGGTCCATTGGATTACTTGACAATACTAGATAGCACCCCAT
AATGGAACTACAGTACTTTCAACTATTTGAGGACTAGACTACTGGCCCTG
TGCCGGCGGACTCTCGACTGTAAACGCCATCGGTGCGCAAATGCTTGCCC
CGATGAACTCGGGACTGACCAGAAGGCGGTTGACGGTATAGATGGACGCC
ATCGTGGAAGACGGAGGGAAGGAAAGGCGACCGTGAGTAAGCGTCGGGTT
CAGGCTGAGTGTGGAGAATGAGCGGGCTGACGTGGGACAGGACGGCCGAA
TTTGTCTCGCGGGACCAGATTCTCAGCCGCGAACGAGGATTGGGAAAATC
AGTTTTCCCTCCTTGGCTGACCACTATTAGAGGGTAGCTGGATTGTCAAC
TATATCCGGTTGATCCCCAGTCTGCTGTTTGACCATATAGGCTGTATACT
GTTACATCGATCTGAGTTGGCAGTTTCGATTCAAAATAACTCCAAAGTTC
AAGGTTGCTTAAAGCAGCTTGCCCCTTTCTGTAAGGCCAGAAAATTGTCA
TCTCTCTAAATATATACGGTCGGAAACAGATAAGTACCTCGTACAAGTAT
GTACTTGAGCGCAGCATAATTCGAACCCGTTCCTACTATCGCCGCCCATT
ACTGTTAAACTATCATACTGGTACCATATTAGATAGGTTAGCTATCGCTA
TACGCTCGCTAAAGGTTACCTGGTAGGTGTGTAACTATCGTCAGCTTAAC
ACAGGAGGTGTTGGTGTAATGTGTGGTTGGTGTTTGGCTTGTTGTACTGG
CGTCGTCCTCAAAACTGTACGGGAAAGTGCCAAGCGTGAAAGAAAACAAG
CAGGCTGACGCAGACAGTCGTCTTTTTTCGAAGGCAGTTTTCGTGCGGCG
CGTTGGTGCTGTGTAATTGTTCATCGGCAGAGCGTGAAGGTCTATCTACA
CATGTACAGCGGGAATGTTCAGCAGAACCGTTTACGCGCAGCATCCTGTC
ACTAAGAATCTTCCCATCTCTCCCCGGTTCTCGCCTACGATTTTTTATCG
CGATGCAAATTCAGTATTCGTACTAGCACACCTTTGTACAGCAGTAATAA
TAGGCTCTATGCGCAGCACCCTGTGTTGAAATTGTTCATGATGAGAGTGT
GAAGGTCTATCTATACACATGTACAACGGGAATGTTCAGCAGAACCCTCT
ATGCGTAGAACCCTGTGTGAGTAAGGAATTTTCCATCTCTCCCCGGTTCT
CGCCAACGATTTTTGATCCCGATGCAAATTCAGTACTCTCACGAGCACAC
CTTTGTCTTTGTACAGCAGTAGACTATGCGCAGAAAACCCTGTGTTTGAA
ATTTTCCAAGAGAGCGTGAAGGAATGTCCAGCAGAACACTTTATGCGCAG
CATCCTGTGTCACTAAGAATATTCACATATCTCTCCGGTTCTCGCCTACG
ATTTTTTATCGCGATGCAAATTCAGTAGACTTTATGCGCTGAACCCTGTA
TCTCGAAATTGTTCATGATGAGACCCTGAAGGTCGAAATTGTTCATGATG
ACAACGTGAATGTTCAGCAGAAACCCTCTATGAGGAGAATCCTGTATCAC
TGAGGAATTTTCTATCTCTCCCCGGTTCTCGCCAACGTCTTTTGATATCG
ATACAAATTCAGTACTCTTACGAGTACATCTTTGCCTTTGTACACTCGTA
GACTCCACGCGCAGAAAACCATGTGTTATAAATTTTTAAAGAGAGCGAGA
GCGAGAGCATGAAGACCTGTGCGACAGGAATGTCCTGCAGAACGGGAGTT
TCACTAAGGATATTCCCATCTCTCCCCGTTTCTCGCCTACGTTTTTCTAT
CGCCGGGCAAATCCCGTACCCTACAGTGCACAGTTTTTGATACGCCGGTA
CTTTCAACATGCCCACTTCATACCAATTGTGGGTGTGGGAAAGAGAGGCG
CATATTAATTGGTCCATGTTGACCTGCCAAGGCAGCACTCGTTCGGAACT
ACCTTGAGATTTACTGGCCCTGTGCCGGCGGGCTCTTGGCAGTGAACGCC
ATCGGTACGTAAGTGCATGACCCGATAAATTCGGGACTTACCCGATGGCG
TATGGCGGTTTCATAAATGGACGCCGCCGCGGAACTCGGGAGGAATCCCG
TACGTAAGCACCAGATTCAGCCTGAGTATAGAGATGAGCAGGCTGACGCT
GGACGGGACGGCTGAACCCGTCTCGTGAGACCAAATTCTCAGGCACGCAC
GGGGACAGGGGAATATTCATTTTACCTGTTCAGCTGACCACGAGCAGGAT
TGGCAACCTTACCCGGTTGATACATGCTCTGCTATACTGTATGTGACGAC
TATACGTACATACATACATACACTCCAGCCCAAATTGATGCATCCTGCAG
ATAAGAAGCTCACTACGCTCGCAATGGTTTTTTTTAAATGTGGAATTGTT
TTGCATAGCACAGCAAAAAAAAACAGGTGTGGCTATCGGGGCGCCTGCAA
CGGGCACAAGTAGGAGAAGTGGGTTGACTGATGTTCGAGGAAGTGCCGAA
TATAACGACCCCGGAATAGAACATATGCTGTGCCGAAATGTATAAAGAGG
TACCGAGTATAAGATCATAGAATTACCGAATATAACGACCCTGAAACGGA
TCAAAGAAGTACCGAAACGGTATTCTGATTGGTCAACGTGCACAGTTTTT
GATACACCCGAGCTCAAATTGATGCACCTTACAGATTAGAAGCTCGCTAC
GCTCGCTAAAAGTAAAATGCCCACTAATACTTGTACCAGGTACTACCATA
CTACTTAGTATACTGTAGTTGAATCACCACAGGGCAGCTAGCAATCCAGT
ATATGCATGTATGATAGTCGATGTATACACGTATACAGTCAGTCTATGTA
TTTAACCATGCATTACGCCCTGCATTGGACAAGTCAACTCGCAGTCAAGA
TTTGCAAACTATAGATCACCTGGTCAGGATCATCACAAATCAGCTTTTGA
TTGATTGATTGATTGATTGAAGTCTCACATAATAAGCTGATATCACATAT
TCGGCCCGTGGTCACAACGTAGAAAAACATCATTGGGAAGGGGAAAACGT
ATGACGTACTCTACATACTATTCATAAAAGAAAACGGTAATGGTACAAAA
ATACTCGGAAAAAAACGACACGTCCGAAGAAGCAAAAACAAAAAAGACGC
AGACAGTTGTTAAACCACTTGTGACTAGTCAGCTCTGCCAACTATAAATC
ACCTGGTCAGGACCATCATAAATCAGATTTGTGACCTACAAATCACCTGG
TCAGGACCATCTTAAATCAGATTTGCCTTCCTATACGCGGGATAGGACTG
CCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGCGGACAGGGA
AATGTTATTTTTTCCTGTTCAGCTGACCACGTGCAGGACTGGCAACCCCT
GGTTGATCCATACTCCTGCTATATGTTTGACCATACATCACCCACACCCG
ATCATCACAGGTCAGATTTTCAAACCAAAGCTCGCCTGGGCAGGACCATC
ACCAGTCAAACTTGCTTTTCTATAAGTCTTTGGTGACTAGGATCATCACC
AAGCAGTCTTACAACTATGAATCACTTAATAGGTACGGATCTCCGAGAAA
GCACAAAATATATTTCTCCCCGATATTATGCCATTGGGGAACCCAGTTAG
ACTCCATGAAGACATTTTGGTTAGACTCTTTCTCCCCGACATGTTAGTGT
TAGTGTTAGTGTTGGCCTTATACGACTATAAATAGTGCATCCTACAAGCA
ACTTGGATTCACCAAAACTTGAACCCGATATCAAGCACAACATAATATAG
CTGAGTTTTACTTTTGTTCAGCCTAGGTTTTGGCCTATGTTTTGGTTTTG
GTGTACACCTGCATGGCGATTAAGTAAGTGTACAGTAGTATAACGGTGGG
TTGCTCCCGATATTATACTGTTGACCCGATGTTACTACCATCGGGGAACC
CGTTTAAATGACATGAAGACATTTTGGTAAGACTCTCTCTCCCCGATATT
TTAGTGTTAGTATTAGTGTTGGCCTTATACGACTATAAATAGTGCATCCT
ACAAGCAACTTGGATTCACCAAAACTTGAACCCAATATCAAGCACAACAT
AAAAATATAGCTGAGTTTTACTTTTGTTCAGCCTGGGTTTTGGCCTATGT
TTTGGTTTTGGTGTACACCTGCATGGCGATTAAGTAAGTGTACAGTAGCG
TAACGGTGGGTTGCTCCCGATATTATACTGTTGACCCGATGTTACTACCA
TCGGGGAACCCGTTTAAATGACATGAAGAGTTCTTGTCCTTGCAGCCTGT
GTTCCCATCCAAACGTTTTGACAATTTCCCCCCCTTGATCGGGAGCATGC
TCAGACGGTTTAGATGCGTTCATATTTCTTAAACGCTTTCACCAATATAA
CGTCTTGGAATCAATAAAGACTATTATAGAACGATTGATAGTGTAACGTG
GTTTGGTATTTCGGTTCCTGCTGTACCTACAGTACATGCGATTGAATTAG
ACCTTGCTACACTCTTCTAGATACTGGAAATACTATTAACACTACCACAG
TCTGAACTACGGTATTAAACTTGCCTTGCCAATTGTATAAAACCAGGGAT
CTACACGGTAAATTTACCGCGGTTTTTACCGCGGTAAGGCTTACCATGAT
ATACCGTGGTCGTGAGATACCATATACCGTACCGTTTAAAAAATCGTAAC
ATTTTCAGAAAACCGTACCATTTCTACCATACACCATTTAGAATCGTAGT
ATTTTCAAAAAAACGTACCATATACCATTTAGAACCGTAGTATTTTAAAA
AAAACGTATAAATATGTACCATATACCGTTTTGAACCGTGGAATTCTTCA
GCTACCATATACCGTACCATACACTTACCATGGACATAAACAGAAGTCTA
CAGCGGTAATTCATCCACAGTCTGAGTAATTGTGGAGGCGACTGCTGAGG
GTACAATGTACAATGGTTGTCACAATGACATCAGGTTGTTCATCGATTAT
ACAAATATAAAATATACCAGAAATACTGCATGTAGTAGAACACAGAGCAG
TTGTCACTACATAGGTACAGGAGCATAGAAATACTACTTTATATTTTGGC
GACAAATCCCGACTGTGTTATGCATAGGAGTATTGTATTTGTCAGGTGAT
GATTGGTATGTGTGTAGGGTTTAAAGAAAATCAGAACTTGGTGCATGAAG
CACTTCTGAGCCAAAGGTTCAAGACAGACCAAAACCGTCGAGAGGCTCGG
GACAGCCTGGTGGCAACGGGGCCACTGGCAAAGAAGCCACGGATGCTCCC
CGTTATGGAGCAGCGACGCGCCAACAGACTGGCTGCCGCTGGGAGTGTGG
GTGCCGCTGGAGATGAGGCAGAGAGCGGGTCGGGGCCAAGCATCACGCAC
AAGGTCCGTGTTCTCCAAGAGCTGACGAGGTATGTAGCAGAAAAGGGGGT
GGAGCTGGAAGAAGACGGATTTTCCTTGCCAGGGTTTTGGCGGCGAAGGA
CTCCCTAAGCTTTCTCAAGCGACAGGCGAGGTTATCGAGGAAGCGGCTAT
GCCGCATCTCGCACTCCTCGCACGCCTTTACCACGGGGTCGAGGCCACGA
GCTGCCAGGCTGAGCGGAACTTTTCTGCTCTCGCTCTGCTCATCGGCAAC
ATGCGGTCGAGAATGGGCGCCTTCAAGGTGGAACAGATGATGTTCCTGAG
ACTGAACCAGAGGCATATCCCGGAGATTGCGGCGTATAACAGGGTTATTG
ACAGGCAGCAGGCGCGCCGACACCAGTGGAGAGAGGACACTGGCAAGGCA
CAGAACGAGGCGGCCGGCGATTTGATTGAGATCGACCTGTAGATGATGGT
GACTGGTGACAGCGAGGAATACTTTCATTCGAAGCTCTTTGGACAGTTGG
TAGAGCGGGTTGGCAATAATAGCGCATACCACACAGGATGGAGAGAGAGG
GAGAGAGGGTGAGGCGCGCGCGCACGGGGGGGTGTAGAGTACAAACTCAT
ACGTTGGGCTTAGAGCGCGTGCTTTTTCTTTTTCAAGCCCGGTGTTCTGA
GAACAAGTGACGAGGTCAGTTGCATAGAAGTCCAGGACTGCGTTATGTCA
GCCCGTGTTACCGTAACCGCGCCATTTGCCTACCGCGAAAAAAAAATGTT
ACCATATACCGTGCCATTTGCCTACCGCGAAGAAACATTATTACCGTATA
CCGTGCCATTTGCCTACCGCGAAGAAACATTATTACCATATACCGTGCCA
TTTGCCTACCGCGAAGAATTGTTTTTACCATATACCGTGCCATTTGCTTA
CCGCAATGTTGGGATACCGTAAGCAGATACCATTTGAAAAACCGTGGTGT
GGGCAAACGTACCATCAGATACCGTAAACTCAGATACCATATACCGTACC
GTTTGAAAAACCGTGGAACTCCAAACCGTACCATTTTCTACCATTTTTTA
AAAGCGCTACCGTGTAGAACCCTGTAAAAAACAAACAAACAGCGCCATGC
CGCCTATAACCATATTTTCTTCTAGCGTTCGTCAAAACTTGGATTCGCCG
ATATAGGCTTCTCGCTTCACCAAAAAATATCCTGTACCAAATTTCCAAAT
TAAAATACACCTCTTTCAAACAAAATAGGGTTGATACTGCGCACATATTT
AGCTTGTTTCTGCGTTAGGTTTGGTGTACCAGCGTGGCGATTAGTGTAGC
AAGTGTACAGTATAACGCTGGATTCTCTATTTGTATTACAGTATAATTAT
GACCTCTTACTACAGGTGATATAATAGTTCAAGCTCTACTGTATGCTACT
TCCGTAGGGACGCCCGACTTTTGATAAACCCCATGAAGAGTTTTTCTTCC
ACAGTTGCAACCATTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCACAC
CTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTACCAAAGTAGGATTTGTG
TTCTTTCTTTCGTAATGGAAAGCGTGGGAACGTGAGTAAGAAAATATTCA
ACCATCGGTTGACGAGTTGTAAGAGTGCTGAACTTGCATCGCGACAAAAA
TTGTAAGGCGTGAACCGGGGAGAGATGGGAAGATCCTTCGTGACCACAGG
CAGGATGGTAATTATGAGGTCCATCGGCCATAAGTGTGAAAAACAATATT
TCGACACAGTTTCCCCGGGACGAGGTGTGGATGCTCGGATGGTAGACGCC
TTCAGGATTCGAAACCCCGGACAAATCAACTGGCACAATCAAGACTTGCA
AACTATAAATCACCTGGTCAGGGTCATCATAACTCAGATCTGCAAACTAT
CAATCACCTGGTCAGGATGGTCATACATCAGATTTGCAAACTAAAAATCA
CCTGGTCAGGATCACCATAAACCATACTTTGCAAACTTAAAATCACCTGG
TCAGGATCATCATAAATCAGATTTGCCTTCCGATCAATCACCATTTATTT
GAATATAATCAGTCAAATGATGCAACTCATGAGTTGATTTATTCAGGGTC
CGGTACGTGTCTATGAACATCAACCAATGTGATTGCCAATCCTGCTCTTG
GTCAGCTATACAGGGAAATTGGAATTTCCCTGTCCCCGTTCGGGCTTGAG
AATGAGTCTCGCGGGACAGGTTCGGCCGTCCCTTCTAGCGTCAGCCCCCT
CAGTCTCCACACCTATTTATTTATTTATTATCTCACTTATAGCCGATGGA
CCTCATAATTACCGTCCTGCCTGTGGTCACAAAGGATGTTCCCATCTCTC
CCCGGTTCACGCCTTACAATTTTTATCGCTATCGATGCAAGTTCAGCACT
CTTACAACTCGTCAACCAATGGTTGAATATTACTTACTCACGTTCCCACG
CTTTCCGTTACGAAAGAAAGAACACAAATCCTACTTTGGTAAGAATCGAA
CTCCCGACTTCCGCACCAGCACGTGTGCAGGTTACCTACTAGACCACTCG
GGCGACGAGCAGTTAATACTATTAATAGACTAAATTCCTCTTCTTCCTCC
CGATTTCTGCGGCGGTGTCAATTTATTTGTACCGCCAACCGCCATCGCGT
GTGTCCCTATTAGAGTTAGAGTTTATCGGGTCGTGCATTTGCGTACAGGA
GTATAGTATAGTATAGTATACTGATGGTGTTCACCGCCAAGAGTCCGGCG
GTACAAGGTCAGTAGTCTGTTTCTAGTCTAGTCCTCAATGTAGCTCGAGT
AACGGGTGCTGTATTATCTCGTGCCCTCTCCCTCCGAAACCTGGTTTCGG
GGTATGAGTGTGGGAGGGTCTTTCCGGCGGGTGTAGGGCCGGGCTCACCC
TCAAGAGATGCAGCCAACTGGCTGCCTTCGCGATCCATCCTGTAGGTTGA
GACGCGGCGGCGGTATGGTTGGCTGAGGATGGTGTTCTCAGGTGCGCGCC
TCTTCCAAGCCCCAATTTGGTGGCCTTCGGGAAGGTGGCGGCACGCGAGA
GGCAGGGAGCGTCGCGGAGAGCCTGATAGTGCTGTATCGGGTGGGTACGC
ACCAGATTCGGCGAAGGCGGAGGGCAGCTCGATCGTCGACGAGCCAGGGG
AGGGCTGAACCCCTGTGCGCGAGAATCATATTGCAGGCTTGAACCTGGAG
GTTTCTGAGGGAAAAGCTGACATCTGACCACGGTCTTTTTTCTTCCTGCG
AGGGCCACAAGGAGCGGCGAACGGGCAAGATTCGTGGGGCTTTTTCAGGG
ATGCACAGGGCTTTGGACGGCTGGATACTGGCTCGAGCGCCGGCCTCACC
AGCTCAAGGCCTCCACCACCATGGACCTCGGTATTTCATGTTTCCTTATT
TCTGTACGATTGTGTGGCCTTGAGAAATTTGGAGTTGTTGTTGATTAAAA
CTGGTTGGAGCTTAATGTTTCCGATTTTTTGCTGAGAACGCTGGTCGTGG
GTAGGCGATAACAATCCGAGTCGATCGAGGTTGCTGTCGATATGGAGTAA
GGAGGTTTGATGGACCGTTTTGATATTGGTCGGTGGCATTGCTTGTAGAG
TCGCATAACTTTTTTTGTCGTCATTTGGATCATCATCCCTGTTGGTCTGA
GTAGCGGGTTGTCGCCATGATGTGACCCGTTGACCTTTGTACCTCTTTGT
GAACGCAAGCGGGATTAGCATTTGATAGGTCTATGGCTGACTTGTTGTGC
CACCGTAGTTTCTTCAGTTGCAAGGACAATACGCTGAATGTGTGAATCAT
CAACAACAACAACAACACCTATGACATATTCAGGTAACATAACACCATGT
GGACCATTTTTCGTGCGCCTCTCTTTCCCCACACACTATATTAATAATGG
TACAGTGGACATATCAATGTGCGATACAGACGGTATCGAGACAGTTATGT
ATATATATATATATATATTATATTACCTGCTATGTATGCCCATGACATAT
AACAGAGTATGGATGAACCAGGTATTGTTGCCAGTCCTGATCGATCGCGG
TCAGCTGTGTAGGGAAAGTGACATTCGCGTATGATAATTTGGTCTCGCGA
GACAGGTTCAATGCCCTGTAGTCTGCGATGTACTATTAATACCAGTATGT
CGTTACTAATAATACTATCTGTAGTACAACAGCACAACGAAATATTCGTA
CTCTACTCGTAGGTTTGAGCAAACCAAGCCCCACTAAATTTGCCCTATAG
ATACAGCACACTGCTGGCTACCGCCGGCCTAAAGGTTAGCCTCGGGTGGC
CCTGTGCTTTGACAGGGGGAGGAGCTCGAGGATAAGATCATCGAAATCGC
GACGGTGCTGCGAGAGAAAGCAGACACTATGGTGGCTGACACAGGAGCCG
TCAACTTCAACATTATCCAGCCTATGATAGACGAGATTTCTGTCCTCAAG
GCGAAATACAAGTGAGTAAAAGATGCGCATGTTTTGTTTGTCCATGGGAA
CGGGTACGGTATTTGTTAGAACGACGTCACTATCCTTTCCGTCAGAACCA
GTATCCACATTTCCCTTTGATAGTATCCCCTCCACAACACTCGAAAACCC
GATGAAACTATTGTCGTACCTCGTACAAACTACCTGGTGTAATATTATAC
TTTCCCGGCCAATCTGTCGGTGGTGAAAAATCATACAGCGAGGTTGCAAG
TCGTTGGGCATGGGCATCCCCTCGGCCTACGTACGCCCAACTAGAGTAGG
AGGTCTGTAGCCTAATGCTGTCGTATCTGAACCACCGCCAACCGGCGACG
CTGCTTGTCAGCGAGTTCAGGATCAGCGGTTGTCTTAAAACCCCCACCCG
CCTGCTGGCACTATATATTGTATTTTGTACAGGCTAGTCGTTGGAGCAGT
AACCCCTACTGATTCACCACCACAAGATGGGGCA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1348:239829..251412-

>mRNA_F-serratus_M_contig1348.2589.1 ID=mRNA_F-serratus_M_contig1348.2589.1|Name=mRNA_F-serratus_M_contig1348.2589.1|organism=Fucus serratus male|type=CDS|length=996bp|location=Sequence derived from alignment at F-serratus_M_contig1348:239829..251412- (Fucus serratus male)
ATGTATGTGCCGTTATTGGTGAGTTGCCTGGTTCTAGCTTCAGGGCTGGT
ACATGCCTTCGGTGGAGGATGGGTCCCTTTTGCTCAGAACGGCTTGCAAG
GTCGACAAGCAGAAGCATGGACATCACGATCACGCGACGCAGTTAATGCG
GCAGCGTTGAGGTTACCCCAGCGATCAGTACCGCATAGATTCCGCGCCCA
TCCCAACGAGTACGAGGCATTCTTTAATACGGCCTGCAAGTCGGGTGTAG
CAGTGATGAGTAAGCTCTCCCCTGAGGAGCGCGCTCAGAGGGCACTTGAG
ATGTATGTGCCGTTATTGGTGAGTTGCCTGGTTCTAGCTTCAGGGCTGGT
ACATGCCTTCGGTGGAGGATGGGTCCCTTTTGCTCAGAACGGCTTGCAAG
GTCGACAAGCAGAAGCATGGACATCACGATCACGCGACGCAGTTAATGCG
GCAGCGTTGAGGTTACCCCAGCGATCAGTACCGCATAGATTCCGCGCCCA
TCCCAACGAGTACGAGGCATTCTTTAATACGGCCTGCAAGTCGGGTGTAG
CAGTGATGAGTAAGCTCTCCCCTGAGGAGCGCGCTCAGAGGGCACTTGAG
GGGGAGGAGCTCGAGGATAAGATCATCGAAATCGCGACGGTGCTGCGAGA
GAAAGCAGACACTATGGTGGCTGACACAGGAGCCGTCAACTTCAACATTA
TCCAGCCTATGATAGACGAGATTTCTGTCCTCAAGGCGAAATACAAGGGG
AGGAGCTCGAGGATAAGATCATCGAAATCGCGACGGTGCTGCGAGAGAAA
GCAGACACTATGGTGGCTGACACAGGAGCCGTCAACTTCAACATTATCCA
GCCTATGATAGACGAGATTTCTGTCCTCAAGGCGAAATACAAGCTAGTCG
TTGGAGCAGTAACCCCTACTGATTCACCACCACAAGATGGGGCAGCTAGT
CGTTGGAGCAGTAACCCCTACTGATTCACCACCACAAGATGGGGCA
back to top