mRNA_F-serratus_M_contig1344.2552.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: A0A6H5KQM2_9PHAE (DNA polymerase kappa n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQM2_9PHAE) HSP 1 Score: 597 bits (1539), Expect = 3.910e-201 Identity = 347/605 (57.36%), Postives = 404/605 (66.78%), Query Frame = 1
Query: 205 LFVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTK----------VSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWEAKEGTSDYDGEEEEEEAMCFVREGVDQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASS-SAPGGRLRLRLMGVKASSFRGQAGVPLLPGQPTLDGFLLS 1977
+FVF+N+KAGM D KE+ N IIYEMSKNSSYFKQA+LQD K+D K V+EMK KL+ L RKA RQADKIATELE QR+LD VC+V+DMDMFYAAVE+RDRPELADKPVAVGGE+MISTTNYHAR GVRSAMPGFIGR+LCPELVFV PD+EKY VAEQIR IFREYDPRMR+YSLDEAYLNVT+ + RL G DG+ G E+GV + + + T R+ + K Y+G+EE+EE R+G + +P + +R R +FE+AR +AEEIR RIR TKLTAS+GIGPNFMLAKIASDWNKPDGQ C+GGDR EVLRF+HDLPVRK+GG+GKV EKCLREALGVVTCGDLFR+R A +HVMTPHTSRWLIKA KERTFGEL P+DLL KCREICD+LA +GLEAK TQDSTG YVS+AD+LF AS+LL+REI+GA++ SAPGG+LRLRL+GV+AS FRGQAG P+LPGQ TLDGFL S
Sbjct: 1 MFVFSNNKAGMGSVD--KEKVNHIIYEMSKNSSYFKQAKLQDDKLDQKACIMRVLNVAVAEMKVKLKALGGVRKAQLTRQADKIATELEAQRQLDDVCLVIDMDMFYAAVEVRDRPELADKPVAVGGESMISTTNYHARLKGVRSAMPGFIGRKLCPELVFVKPDYEKYTVVAEQIREIFREYDPRMRAYSLDEAYLNVTKVLCERL------GLDGSNAPAGTK------EAGVAASAAAAGAPEHVCSVTYEAE------------------ADTSRRRRMGSNVMYTEKR----YEGDEEDEEEA---RDG-------RSWEKRNPRETRRIR--LFEAARVLAEEIRARIREATKLTASVGIGPNFMLAKIASDWNKPDGQMCIGGDRAEVLRFLHDLPVRKIGGVGKVQEKCLREALGVVTCGDLFRERGAVIHVMTPHTSRWLIKACY----------------------PDAGKERTFGELSAPRDLLDKCREICDSLAAEMATKGLEAKXXXXXXXXXXXXXXTQDSTGHAYVSSADDLFSAASALLQREIQGAAAASAPGGKLRLRLIGVRASGFRGQAGAPVLPGQATLDGFLSS 535
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: A0A8B7YQ85_ACAPL (DNA polymerase kappa n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YQ85_ACAPL) HSP 1 Score: 341 bits (875), Expect = 4.010e-101 Identity = 231/591 (39.09%), Postives = 323/591 (54.65%), Query Frame = 1
Query: 208 FVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRL-------------QDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWEAKEGTSDYDG-----EEEEEEAMCFVREGVDQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASSFR 1917
++KAGM L+KE+ N+II E SK S +++ ++ +V+ ++ M +L + +KA L + D + ELET R+L + +DMD FYAAVE+RD P L DKP+AVGG +M+ST+NYHAR++GVR+AMPGFIG++LCPELV VP +F+KY+ V+ Q+R I +YDP SLDEAY ++T + RR ++ G +G G G C + +GT DG V N + + S ++ +SD E + C R + + V+ + + R + EEIR RI +T+LTAS GI PN MLAKI SD NKP+GQ+ + DR V+ FI LP+RKV GIGKVTEK L ALGV TC DL++QRA + + +S+ ++ SLGIGS+ + +E RK +S ERTFGELHRP DL +KC E+C ALA + L KTV +K+KT KFEV+T+ + +S+A+ +F VA LLR EI A P LRLRLMGV+ S+ +
Sbjct: 63 MALNDNKAGMD--GLDKEKINKIIMEASKGSRFYENERKKEAQVNQRIDRMMQQLAGITQQQKAAALVEMDAMIAELETSRDLSRSIVHLDMDAFYAAVEMRDNPSLKDKPMAVGGMSMLSTSNYHARRYGVRAAMPGFIGKKLCPELVIVPTNFDKYRAVSAQVREILAQYDPNFCPMSLDEAYFDLTGHLERRKGFSEAQRTFDYRDRNQEEDGWNGGGSDG--------------------RRCANLSGTQ-----YPHQEGDIEDVRRDGA-VSNRTGDEDILPSSRHHQDFSSDTSAPCLCVESTDSSDNCCTRSRGETERTISNAVKVATSGKGRQCRTFGFTIEEAVEEIRFRIEQKTQLTASAGIAPNVMLAKICSDKNKPNGQYRIQPDREAVMEFIQVLPIRKVSGIGKVTEKML-SALGVQTCTDLYQQRALLHLLFSQISSQHFLRISLGIGSTKVERDSE---------RKSMSTERTFGELHRPADLYSKCHELCQALAEDLQSEELTGKTVTIKLKTVKFEVKTKACSVPTCISSAESIFSVAKDLLRAEI-SACKPEP---LRLRLMGVRLSNLQ 611
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: A0A8K1FPT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPT7_PYTOL) HSP 1 Score: 335 bits (860), Expect = 1.870e-100 Identity = 228/592 (38.51%), Postives = 310/592 (52.36%), Query Frame = 1
Query: 154 DITKEREH-DGRSKDGSHLFVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWEAKEGTSDYDGEEEEEE--AMCFVREGVDQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALA---TARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASS 1911
D TKE H + + + +FVFT KAGM D++KE +++YEMSK+S +F+ + Q+QKV+ +++EMK KLR L + RQ D + + ETQR+L +VVDMDMFYAAVE+RD P L KPVAVGG M+STTNY ARK+GVR+AMPGFIG+ LCPEL+ VP +F+KY +++Q+RAI +YDP + SLDE YL++T + A GG GR ++ +D DGEE E++ AM RE VAA +V +EIR RI T+LTAS GI N MLAKI SD NKP+GQ+ + R V+ F+ LPVRK+GGIGKV EK L ALG+ T D++ R H +TP ++ WL++ S+G+ S + E +E RK S+ERTF + P+ L CRE+CD L G AKT+ LK+K F VRT+ + + T+D+LF A LLR+E+ L LRL+GV+AS+
Sbjct: 17 DETKEDAHASSAATEAAQMFVFTAQKAGMK--DVDKEHVQKVVYEMSKDSLFFQNSIKQNQKVEARINEMKLKLRGLTKAKHETLRRQIDPLVAQWETQRDLTRTMVVVDMDMFYAAVEMRDNPSLRGKPVAVGGIGMLSTTNYEARKFGVRAAMPGFIGKELCPELIIVPTNFKKYTTISQQVRAIVADYDPNFTAMSLDEVYLDITDYMEANWAKYAGAGG--------------------------------------------------------GRSESDDE----------------ADQDGEEIEDQSHAMNSQRE-----TVAAAIV----------------------DEIRRRIHGVTQLTASAGIAANTMLAKICSDINKPNGQYVLPFTRDRVVSFVQGLPVRKIGGIGKVMEKVLG-ALGITTAKDIYDHRVELFHALTPRSAAWLLQISMGVKQS----SGEPSE------RKSYSRERTFRGIGDPRWLEKICREVCDMLGKDLAEGGHGAKTLTLKLKCVDFSVRTRAVSSTCIMKTSDDLFAYAIELLRKEMP----------LELRLLGVRASA 486
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: A0A7S2WBD8_9STRA (DNA polymerase kappa n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBD8_9STRA) HSP 1 Score: 337 bits (863), Expect = 1.630e-99 Identity = 224/619 (36.19%), Postives = 307/619 (49.60%), Query Frame = 1
Query: 199 SHLFVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWEAKEGTSDYDGEEEEEEAMCFVREGVDQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETK-LTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQ-----------AEAAGI--VTRKQISKERTFGELHRPQDLLAKCREICDALA---TARGLEAKTVGLKIKTAKFEVRTQDSTG--GVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASSFRGQAGVPLLPGQPTLDGFLLSSRTTREP 1998
+HLFVFTNDKAGM + D K + N+++YEMSK+S+YF A QD+K D ++ +++ KL+ L R++ + + +LE QR VC+VVDMD +YAAVE+RD P L DKP+AVGG MIST NY AR++GVRSAMPGFI +LCPEL+FV F+KYK ++++ + R+YDP R SLDEAYL++T+ V RR V E + + N+ +GG + + E A V E+R +++ + LT S G+ PNF LAKIASD KP+GQ V R + F+H +PVRKVGGIGKV EK L+E GV T +LF +R H +TP +S WL++ +L I D A + AEA + V RK IS ERTF L DL AK +C LA +A+ L +TV LK+KT KFEVR++ +T G YVST +++ + LL +E L LRLMG++ S F+ Q L GQ T+ F+ +P
Sbjct: 130 AHLFVFTNDKAGMGKVD--KSKVNKVVYEMSKDSAYFAHASSQDKKNDKRIHDLREKLQSLSLSRRSSLASEVSALEIKLEKQRFCRRVCVVVDMDCYYAAVEMRDNPHLRDKPMAVGGIGMISTANYKAREYGVRSAMPGFIALKLCPELIFVRSHFDKYKETSDRVLTVLRQYDPHCRMMSLDEAYLDLTEEVSRR--------------------------------------------------------------------QVEETSSKANL-------------------------------EGGA---------------QMELEEMASRVVAELRAKVQEASGGLTCSAGLAPNFRLAKIASDVKKPNGQCIVPFHREAAIAFLHSMPVRKVGGIGKVMEKTLKEVFGVETVAELFEKRLELFHCLTPKSSHWLLRVALAIHHDDEAKAMAEWKTAVGDGEDAAEATSVQSVRRKGISCERTFAPLSNRADLQAKLSSLCRTLAEHMSAKALSGRTVTLKLKTTKFEVRSRAATAPAGTYVSTGEDIERLVMPLLEKEFP----------LSLRLMGIRVSHFKNQFKA-LDAGQRTIGSFMQRGAAGAKP 621
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: UPI0018D8539C (DNA polymerase kappa-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8539C) HSP 1 Score: 331 bits (849), Expect = 2.460e-97 Identity = 221/596 (37.08%), Postives = 320/596 (53.69%), Query Frame = 1
Query: 178 DGRSKDGSHLFVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSC------KSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERL------NVGCSWEAKEGTSDYDGEEEEEEAMCFVREGVDQG-GVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALATA---RGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASSFR 1917
D R ++KAGM L+KER N+II E SK S +++ ++ +V+ ++ MK +L + +KA L + D +A ELE R+ + +DMD FYAAVE+RD P L +KP+AVGG +M+ST+NYHAR++GVR+AMPGFI ++LCPELV VP +F+KY+ V+ Q+R I +YDP SLDEAY ++T+ + +R + + + + G + P++ K S G T G + R+ N + E T++ C GV + + G+ +R R F + V EEIR RI +T+LTAS GI PN MLAKI SD NKP+GQ+ + DR V+ FI LP+RKV GIGKVTE+ L ALG+ C DL++QRA + + +S+ ++ S+ +GS+ + +E RK +S ERTF ELH+P DL +KC E+C ALA L KTV +K+KT KFEV+T+ + + +++AD +F VA LLR EI LRLRLMGV+ S+ +
Sbjct: 58 DARGDGMMSRMALNDNKAGMD--GLDKERINKIILETSKGSRFYENERKKEAQVNQRIDRMKQQLAGITQQQKAAALVEVDTMAAELEASRDFSRSIVHLDMDAFYAAVEMRDNPSLKNKPMAVGGMSMLSTSNYHARRYGVRAAMPGFIAKKLCPELVIVPTNFDKYRAVSTQVREILGQYDPNFCPMSLDEAYFDLTEHLEKRKE---------------LSEAERTFDYGDWNSQSEPTNDVQEGEEKDSVGKTQSHGDISEQDSTQESCVCGGANDETLSPSRMQAEVSSNTSVACRCAESTNNASD-------PCHASLGVSKTESSTSHCAVGAVTSRKRSRTFGF-TVEEVVEEIRFRIEQKTQLTASAGIAPNVMLAKICSDKNKPNGQYRIQPDREAVMEFIQQLPIRKVSGIGKVTERML-SALGIQNCTDLYQQRALLHLLFSQISSQHFLRISMALGSTRVERDSE---------RKSMSTERTFRELHKPADLYSKCSELCQALAEDLQNEDLVGKTVTIKLKTVKFEVKTKACSVPMAINSADCIFSVAKDLLRAEINACKPEP----LRLRLMGVRLSNLQ 614
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: UPI00145527F3 (DNA polymerase kappa-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI00145527F3) HSP 1 Score: 332 bits (852), Expect = 3.550e-97 Identity = 237/647 (36.63%), Postives = 338/647 (52.24%), Query Frame = 1
Query: 208 FVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQ-------------DPAVIGGDGAGDVGGIL------------GIDEVCESGVTLPSTRPSSCKSSA--GTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSW--EAKEGTSDYDGEE------EEEEAM---CFVREGVDQGGVAAPVVRGSPLDEQRYRARMFE-SARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASSFRGQAGVPLLPGQPTLDGFLLSSRTTREPKYGGAMAP 2022
++KAGM L KE+ N+II E SK S +++ ++ +V+ ++ MK +L + +K++ L Q D + ELE+ R + I +DMD FYAAVE+RD+P L +KP+AVG +M+ T+NYHAR++GVR+AMPGFI ++LCPEL+ P +F+KY+ V++Q+R I YDP SLDEAY ++T + +R + V G D G V G+ + +G L S K + T +G ++ +++ S+ + GTS E + AM C V E + + + + R R F + V EEIR RI ET+LTAS GI PN MLAKI SD NKP+GQ+ + +R V+ F+ +LP+RKV GIGKVTEK L +LG+ TC DLF+QRA + +P +S+ + SLG+GS+ + E G RK +S ERTF ELH+P DL KC E+C ALA L KTV +K+KT KFEV+T+ + Y+ TAD +F VA LL+ EI S LRLRLMGV+ S+ + G P Q ++ F + T PK M P
Sbjct: 93 IALNDNKAGMD--GLNKEKINKIIIETSKGSRFYENERKKEAQVNQRIERMKQQLDGISEQQKSIALAQVDMMVAELESSRSFNRSIIHLDMDAFYAAVEMRDKPSLKNKPMAVGSMSMLCTSNYHARRYGVRAAMPGFIAKKLCPELIITPTNFDKYRAVSKQVREILGIYDPYFCPVSLDEAYFDLTDHLEKRKVMSEDERTFEYGDWNTVVKGFDNDGIVEGVHVKKDDRGHEKSDSTRQDTRNGTELASDNDHVAKETPPLSTLKSNLDFPEKTLSQTKLMMSNKGTRDD----MDIKSSFKDDNHSGTSHLFSPEVALDNRDHSTAMLSKCTVHEDI--------LKEMRSISSKPRRCRTFGLTVEEVVEEIRFRIEQETQLTASAGIAPNTMLAKICSDKNKPNGQYRILPNRDAVMEFVQELPIRKVSGIGKVTEKLL-SSLGIHTCTDLFQQRALLQLLFSPTSSQHFLGISLGLGST-------RVERDG--ERKSMSTERTFRELHQPADLYNKCNELCQALAEDLLKEELMGKTVTIKLKTVKFEVKTKSYSVPSYIQTADCIFRVAKDLLKAEINDCKSEP----LRLRLMGVRISNLQA-CGAPSSNKQESITKFFKKRQETTTPKQQPDMQP 710
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: UPI0014581227 (DNA polymerase kappa-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581227) HSP 1 Score: 327 bits (837), Expect = 9.520e-97 Identity = 215/577 (37.26%), Postives = 320/577 (55.46%), Query Frame = 1
Query: 208 FVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPS-TRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWE-AKEGTSDYDGEEEEEEAMCFVREGV----DQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASS 1911
+ ++KAGM L+K+R N++I E SK S YF+ + ++++V+ K+ E AKL+ + L +AD++ ELE QR+L V + +DMD FYAAVE+R+ P L DKP+AVGG +M+ST+NY ARK+GVR+AMPGFIG++LCP+L+ V P+FEKY V+ +IR + +YDP SLDEAYL++T + +R+ EV + + S ++ +C T + G +N+E ++G + A ++ DG + +E E D G P+ G P F SA +E+R RI +TKLT+S GI N MLAK+ SD KP+GQ+ + R V+ FI DLP+RK+ GIGKV+EK L AL + TC DL+ QRA H+ +P + + ++ +GIGS + + ++ RK +S ERTF E+ +P++LL KC+E+C +L L+ KTV +K+KT K+EV+T+ T Y S + +F A LL+ EI + LRLRLMGV+ SS
Sbjct: 76 MLLNDNKAGME--GLDKDRINQVILEASKGSKYFENEKKKEEQVNKKIEEQMAKLKKISDVELRQGLTEADRLLEELEGQRDLSRVIVHIDMDAFYAAVEMREDPTLKDKPMAVGGYSMLSTSNYLARKFGVRAAMPGFIGKKLCPDLIMVKPNFEKYTAVSREIRLVMSDYDPNYCPMSLDEAYLDITDHLDKRIHS------------------SEVDRTFLCRKSDSKDGNCNCDLNTAARDAVLTARL-----------GCHQKNSELSSMGENTRGAGSVPTEPDGNKSDERLPHNYSEVTLASRDLTGGPCPIC-GKPFPPYDVVTFGF-SAEDSVKEMRSRIEQKTKLTSSAGIASNMMLAKVCSDKKKPNGQYRIAATRDAVMGFITDLPIRKISGIGKVSEKMLN-ALNIHTCCDLYNQRALLYHLYSPISFNYFMRICMGIGSVNVERDSD---------RKSMSTERTFHEISKPEELLKKCQELCVSLCEDLREEKLKGKTVAIKLKTVKYEVKTRAQTLPDYTSDLEVVFSAAQGLLQTEIHSVAPHP----LRLRLMGVRMSS 605
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: A0A8C6W564_NANGA (DNA polymerase kappa n=3 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6W564_NANGA) HSP 1 Score: 330 bits (846), Expect = 1.080e-96 Identity = 225/586 (38.40%), Postives = 318/586 (54.27%), Query Frame = 1
Query: 169 REHDGRSKDGSHLFVFTND-KAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWEAKEGTSDYDGEEEEEEAMCFVREGVDQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASSF 1914
+E + +KD L + ND KAGM L+KE+ N+II E +K S +++ ++++V+ ++ M + + + Q D+ A ELE R L++ + VDMD FYAAVE+RD PEL DKP+AVG +M+ST+NYHAR++GVR+AMPGFI +RLCP+L+ VPP+F+KY+ V+++++ I EYDP + SLDEAYLN+T + R P D E+ + G + R C S L + + S + EE+ + ++ V G A VV+ EIR RI +T LTAS GI PN MLAK+ SD NKP+GQ+ + R V+ FI DLP+RKV GIGKVTEK L+ ALG++TC +L++QRA + + + + + SLG+GS+D + E RK +S ERTF EL + +D + CRE+C LA GL+ +TV +K+K FEV+T+ ST VSTADE+F VA LLR EI A S P LRLRLMGV+ S+F
Sbjct: 6 KEMNNNNKDDLLLRMGLNDNKAGME--GLDKEKINKIIMEATKGSKFYRNELKKEKQVNQRIENMMQQKAQITHQQLRKAQLQVDRFAMELERNRNLNNTIVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKDILAEYDPNFMAMSLDEAYLNITMHLQERQNWPE----DRRRYFIKAENSVEIDKPGEEVKKLREYECSISP--------------------------------LLFEDSPPDTQPPGSPFQLNSEEQNSPQILQNSVVFGISAEEVVK----------------------EIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRQAVMDFIKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRAVLSLLFSEVSWHYFLHLSLGLGSTDLERDGE---------RKSMSVERTFSELSKAKDQYSLCRELCADLAQDLQKEGLKGRTVTIKLKNVNFEVKTRASTVSSAVSTADEIFAVAKDLLRTEIN-ADSPHP---LRLRLMGVRVSAF 517
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: UPI001BB28F45 (DNA polymerase kappa-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB28F45) HSP 1 Score: 331 bits (849), Expect = 1.550e-96 Identity = 226/597 (37.86%), Postives = 322/597 (53.94%), Query Frame = 1
Query: 199 SHLFVFTNDKAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLP--STRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGC--SWEAKEGTSDYDGEEEEEEAMCFVREGVDQG---GVAAPV----------------VRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASS 1911
S + + TN KAGM L+KER N+II E SK S Y++ + ++Q+ ++++M KL L K L Q D++ +LE R+L+ + +DMDMF+AAVE+RD PEL +KP+AVGG M+ST+NY AR++GVR+AMPGFI ++LCPELV VP F+KY+ V+ Q+R I EYDP SLDEAY ++T+ + RR + DE T P S S +S D + V E+ + + GT D +++ ++ C DQ G P G+ +E R + V EIR RI +T+LTAS GI PN MLAKI SD NKP+GQ+ + R +V+ FI DLP+RK+ GIGKVTE+ L ALG+ TC DL++QRA C + + +S + ++ SLGIGS+ + E RK +S ERTF E+ P +L +KC E+C++LA ++ KTV +K+KT F+V+++ S+ VS+A E+F +A L+R EIR LRLRLMGV+ SS
Sbjct: 19 SSMELNTN-KAGME--GLDKERINKIIMEASKGSRYYENQKKREQQTTERINKMMEKLSQLTESEKQAALTQVDEMVRDLELSRDLNRTIVHLDMDMFFAAVEMRDNPELKEKPMAVGGMHMLSTSNYKARRFGVRAAMPGFIAKKLCPELVLVPSHFDKYQAVSTQVREILAEYDPNFCPMSLDEAYFDLTEYLERRRT----------------MSADER-----TYPYWSAESSDQGGEGQKSSSDEAAHQEKPSDDGPSGDDQTCVGEDKSLFTMVSRNQGQVTSGTDATDLDKDRPQSPCHQENAEDQSRSLGSCTPEGGRPELLTQEMDDGESASGTKRNESRCET-FGVTCEEVVREIRFRIEQKTRLTASAGIAPNCMLAKICSDKNKPNGQYRIPPTRDDVMDFIRDLPIRKISGIGKVTERML-SALGIQTCTDLYQQRAHCYLLFSQISSSYFLRISLGIGSTHVERDGE---------RKSMSTERTFKEMSVPTELYSKCMELCESLAEDVKKEQIQGKTVTVKLKTVDFKVKSRASSLKTPVSSAQEIFAIARDLIRTEIRACHPEP----LRLRLMGVRLSS 576
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Match: A0A452GNC0_9SAUR (DNA polymerase kappa n=20 Tax=Durocryptodira TaxID=1579337 RepID=A0A452GNC0_9SAUR) HSP 1 Score: 330 bits (845), Expect = 2.300e-96 Identity = 224/591 (37.90%), Postives = 317/591 (53.64%), Query Frame = 1
Query: 154 DITKEREHDGRSKDGSHLFVFTND-KAGMSRTDLEKERTNRIIYEMSKNSSYFKQAELQDQKVDTKVSEMKAKLRLLDSPRKALFLRQADKIATELETQRELDSVCIVVDMDMFYAAVEIRDRPELADKPVAVGGEAMISTTNYHARKWGVRSAMPGFIGRRLCPELVFVPPDFEKYKRVAEQIRAIFREYDPRMRSYSLDEAYLNVTQAVLRRLQDPAVIGGDGAGDVGGILGIDEVCESGVTLPSTRPSSCKSSAGTTSXXXXXXXXXXXXXXXXXDGRGVVNENNERLNVGCSWEAKEGTSDYDGEEEEEEAMCFVREGVDQGGVAAPVVRGSPLDEQRYRARMFESARFVAEEIRGRIRHETKLTASIGIGPNFMLAKIASDWNKPDGQFCVGGDRGEVLRFIHDLPVRKVGGIGKVTEKCLREALGVVTCGDLFRQRAACMHVMTPHTSRWLIKASLGIGSSDHDVATEQAEAAGIVTRKQISKERTFGELHRPQDLLAKCREICDALAT---ARGLEAKTVGLKIKTAKFEVRTQDSTGGVYVSTADELFEVASSLLRREIRGASSSAPGGRLRLRLMGVKASSF 1914
D TK+ + D L + ND KAGM L+KE+ N+II E +K S +++ +DQ+V+ ++ +M + S + QADK+A ELE R+L + +DMD FYAAVE+RD PEL +KP+AVG +M+ST+NYHAR++GVR+AMPGFI ++LCP L VP +F+KY+ V++++R I EYDP LDEAYLN+T+ + R P D E T P K + S ++ E+N + E+ + + +E DQ + VV G+ +E V +EIR RI +T LTAS GI PN MLAK+ SD NKP+GQ+ + DR V+ FI DLP+RKV GIGKVTEK L+ ALG++TC +L++QRA + + + + SLG+GS+D + E RK +S ERTF E++ ++ C+E+C LA GL+ KTV LK+K FEV+T+ STG VST +E+F +A +LR EI G + LRLRLMGV+ S F
Sbjct: 2 DSTKKIVNTSDDDDAFLLRMGLNDNKAGMQ--GLDKEKINKIIMEATKGSRFYENELKKDQQVNQRIEKMMQLKNKVTSQQLLKAQLQADKLAQELEQSRDLSCTIVHIDMDAFYAAVEMRDNPELKEKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKKLCPHLTIVPLNFKKYEEVSKEVREILAEYDPSFMPIGLDEAYLNITEYLEERQNWPE--------DKRSYFIKREKTAKNGKQDVTAPDELKLNEDAHSSSP------------------ILFEDNTSITE---------------EQPVATSHLYTKEQRDQELLLNSVVFGTSAEE-------------VVKEIRFRIEQKTGLTASAGIAPNMMLAKMCSDQNKPNGQYRISPDRQSVMDFIKDLPIRKVPGIGKVTEKMLK-ALGILTCTELYQQRALLSLLFSETSWHNFLDVSLGLGSTDLEKYGE---------RKSMSTERTFSEINTAEEQYNLCQELCRDLAQDLQKEGLKGKTVTLKLKNVNFEVKTRASTGLAAVSTEEEIFAIAKDMLRTEIDGVAPHP----LRLRLMGVRVSGF 522 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1344.2552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1344.2552.1 >prot_F-serratus_M_contig1344.2552.1 ID=prot_F-serratus_M_contig1344.2552.1|Name=mRNA_F-serratus_M_contig1344.2552.1|organism=Fucus serratus male|type=polypeptide|length=676bp MAQQQLQQDITKEREHDGRSKDGSHLFVFTNDKAGMSRTDLEKERTNRIIback to top mRNA from alignment at F-serratus_M_contig1344:40686..52026- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1344.2552.1 ID=mRNA_F-serratus_M_contig1344.2552.1|Name=mRNA_F-serratus_M_contig1344.2552.1|organism=Fucus serratus male|type=mRNA|length=11341bp|location=Sequence derived from alignment at F-serratus_M_contig1344:40686..52026- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1344:40686..52026- >mRNA_F-serratus_M_contig1344.2552.1 ID=mRNA_F-serratus_M_contig1344.2552.1|Name=mRNA_F-serratus_M_contig1344.2552.1|organism=Fucus serratus male|type=CDS|length=4056bp|location=Sequence derived from alignment at F-serratus_M_contig1344:40686..52026- (Fucus serratus male)back to top |