mRNA_F-serratus_M_contig1333.2488.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 109 bits (273), Expect = 8.520e-27 Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 16 VPGLVEAGTRTTVSVKANAFDSRTSGGGCTPIG---CVEANTRD---SSLSSRWSCKRDLLDGE-TCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIES-SGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
V G VE GT+T V V + A D R GC +G C ANTRD S + SRWSC L+D E C+I F F EPQ IV I +AF+KG ERTR LE+ +NG + ES + T+ + A +V TV L+S+ L +EWISL EV
Sbjct: 85 VDGAVEVGTKTEVGVSSTAHDVRPGDDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNT--LGVTATDVSTVMLESVALLSDEWISLIEV 231
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 109 bits (273), Expect = 3.230e-25 Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 16 VPGLVEAGTRTTVSVKANAFDSRTSGGGCTPIG---CVEANTRD---SSLSSRWSCKRDLLDGE-TCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIES-SGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
V G VE GT+T V V + A D R GC +G C ANTRD S + SRWSC L+D E C+I F F EPQ IV I +AF+KG ERTR LE+ +NG + ES + T+ + A +V TV L+S+ L +EWISL EV
Sbjct: 336 VDGAVEVGTKTEVGVSSTAHDVRPGDDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNT--LGVTATDVSTVMLESVALLSDEWISLIEV 482
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 107 bits (268), Expect = 7.670e-25 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 25 LVEAGTRTTVSVKANAFDSRT--SGG--GCTPIGCVEANTRDS----SLSSRWSCKRDLL-DGETCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIES-SGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEVR 441
VEAG++TTV V A A+D R S G GC +GC+ D SRWSC +++ DG CEI+F FD PQ I + +AF+KG ERTR L++++NG + ES G+T+ F + + V TVT++S+G+ ++WISL EVR
Sbjct: 251 FVEAGSKTTVGVTATAYDDRPGESAGDVGCGEMGCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNS--FGIQENGVHTVTMESVGIDRDDWISLLEVR 397
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.240e-24 Identity = 72/161 (44.72%), Postives = 92/161 (57.14%), Query Frame = 1
Query: 1 SIPSPVPGLVEAGTRTTVSVKANAFDSR---TSGG-GCTPIG---CVEANTRD---SSLSSRWSCKRDLLDGE-TCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNG----SRSSLIESSGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
S+P+ V G VE GT+ V V A A D+R +SG GC +G C NTRD S + SRWSC L+ E C+I F F EPQHIV I +AF+KG +RTR L + VNG + S +S+ T G+ A+E TV L+S L +EWISL EV
Sbjct: 13 SLPT-VDGAVEVGTKIEVGVSATAHDTRPGNSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVT-----ANEASTVMLESTALLSDEWISLIEV 167
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.520e-23 Identity = 71/157 (45.22%), Postives = 89/157 (56.69%), Query Frame = 1
Query: 16 VPGLVEAGTRTTVSVKANAFDSRTSGGGCTPIGCVEA--------NTRD---SSLSSRWSCKRDLLDGE-TCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNG----SRSSLIESSGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
V VE GT+T VSV A A D R +G +GC EA N RD + + SRWSC LLD E C+I F+F EPQ+IV I +AF+KG ER R LE+ VNG + S +S+ T G+ A+E TV L+S+ L NEWISL EV
Sbjct: 150 VDDAVEVGTKTEVSVSATAHDVR-AGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVT-----ANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 102 bits (253), Expect = 5.090e-23 Identity = 61/146 (41.78%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 25 LVEAGTRTTVSVKANAFDSR---TSGG-GCTPIGCVEANTRDS---SLSSRWSCKRDLL-DGETCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIESSGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
LV A T T ++ A FD R SG GC GC+ D + SRWSC D++ DG CEI F F PQ++ ++ + F+KG ERTR L++++NG + +S + YF++ A +V TVTL+SLGL +EWISL EV
Sbjct: 191 LVNAATITAIAASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSV-TSYFDVIAYDVHTVTLESLGLDTDEWISLLEV 335
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 103 bits (256), Expect = 8.480e-23 Identity = 69/153 (45.10%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 16 VPGLVEAGTRTTVSVKANAFDSR---TSG-GGCTPIG---CVEANTRD---SSLSSRWSCKRDLLDGE-TCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIES-SGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
V G VE GT+T V V + A D R +SG GC +G C NTRD S + SRWSC L+D E C+I F F EPQ I+ I +AF+KG ERTR LE+ +NG + ES + T+ + A +V TV L+S+ L +EWISL EV
Sbjct: 359 VDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNT--LGVTATDVSTVMLESVALLSDEWISLIEV 509
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.960e-21 Identity = 61/143 (42.66%), Postives = 84/143 (58.74%), Query Frame = 1
Query: 25 LVEAGTRTTVSVKANAFDSRTSG-GGCTPIGCVEANTRDSSLS--SRWSCKRDLLDGETCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIESSGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEVRL 444
LV+A RT V ANA+D RTS GGC P GC + TRD S SRWSC L D + C IT+NF+EPQ IVRI ++NG +I SSGT+ E ++++ DE + +++++L L +EWIS+ EVR+
Sbjct: 608 LVDARKRTAVKKWANAYDDRTSEYGGCDPDGCKASFTRDRSWKDESRWSCSEKLEDAQ-CNITYNFEEPQDIVRI----------------KINGEFKKIITSSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEVRI 733
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.130e-20 Identity = 66/152 (43.42%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 28 VEAGTRTTVSVKANAFDSRTSGG----GCTPIG---CVEANTRD---SSLSSRWSCKRDLLDGE-TCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNG----SRSSLIESSGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEV 438
VE GT+T V V A A D R GC +G C NTRD S + SRWSC L+ E C+I F+F EPQ++V I +AF+KG ERTR L + VNG + S +S+ T G+ A E TV L+S+ L +EWISL EV
Sbjct: 459 VEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVT-----ATEASTVMLESVALLSDEWISLLEV 605
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 2.760e-20 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 151 SRWSCKRDLL-DGETCEITFNFDEPQHIVRIDIAFYKGTERTRLLEIEVNGSRSSLIES-SGTTYGLEYFELDADEVETVTLKSLGLGGNEWISLAEVR 441
SRWSC +++ DG CEITF FD PQ I + +AF+KG ERTR L++++NG + ES G+T+ F + + V TV ++S+G+ ++WISL EVR
Sbjct: 19 SRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNS--FGIQENGVHTVAMESVGIDADDWISLLEVR 115 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1333.2488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1333.2488.1 >prot_F-serratus_M_contig1333.2488.1 ID=prot_F-serratus_M_contig1333.2488.1|Name=mRNA_F-serratus_M_contig1333.2488.1|organism=Fucus serratus male|type=polypeptide|length=153bp SIPSPVPGLVEAGTRTTVSVKANAFDSRTSGGGCTPIGCVEANTRDSSLSback to top mRNA from alignment at F-serratus_M_contig1333:60970..61428+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1333.2488.1 ID=mRNA_F-serratus_M_contig1333.2488.1|Name=mRNA_F-serratus_M_contig1333.2488.1|organism=Fucus serratus male|type=mRNA|length=459bp|location=Sequence derived from alignment at F-serratus_M_contig1333:60970..61428+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1333:60970..61428+ >mRNA_F-serratus_M_contig1333.2488.1 ID=mRNA_F-serratus_M_contig1333.2488.1|Name=mRNA_F-serratus_M_contig1333.2488.1|organism=Fucus serratus male|type=CDS|length=918bp|location=Sequence derived from alignment at F-serratus_M_contig1333:60970..61428+ (Fucus serratus male)back to top |