mRNA_F-serratus_M_contig1330.2474.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1330.2474.1
Unique NamemRNA_F-serratus_M_contig1330.2474.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: A0A6H5KLE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE3_9PHAE)

HSP 1 Score: 497 bits (1280), Expect = 2.620e-168
Identity = 224/416 (53.85%), Postives = 308/416 (74.04%), Query Frame = 1
Query:   10 DFVPDRVQTAISFWANTIL--TDHPEREHLLRWLQGVRLDEFVNPDAKGTFQHRKYEGSSLTTTELPNHVPDEFEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERATQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVVR 1251
            DFVP  +QTA  FW+  IL  T   +R  LL W++GV L +F++ +++G FQ   Y+GS +T    PNHVPDE   WV++E++ L  +GCI  W  + D +  P+PH+ LPLGVEP+KPRL WD RWLN MC +SPF MDGVGKVAQC+W+GA+QVT+DHK+G+H++ L P SW+YFG  W+G  YV+TVL FGWCS+P+IY +LSEAV++YLR + IP L W+DDF+LTN R+T+  SS++Q +AA +A  +AL VFY+ GYF+S  K  L+P+T  V+LG+ICD++  RFE+P DKL KL+A++  AI +  ISF  LEKL GKC S+SVAVP A+LYT+HMY+ +  ++RTGG      + + P+GGL +EM++WL VRK+ NGASWY   H  +++TGA+DA S+GWGG++R
Sbjct:    6 DFVPAHLQTAADFWSEEILLETAESDRATLLGWVEGVNLHDFIDKNSRGVFQGLAYDGSDITAAHFPNHVPDEHAAWVTSEVAALAATGCIAKWRDVADVAIHPKPHLVLPLGVEPKKPRLIWDARWLNLMCLHSPFSMDGVGKVAQCAWQGAHQVTIDHKAGYHHVALDPDSWQYFGFEWEGEMYVFTVLAFGWCSAPFIYSSLSEAVARYLRARDIPVLTWIDDFYLTNFRSTRMLSSKEQFQAALTAAYVALEVFYRAGYFLSIKKSELSPTTCLVFLGIICDAERGRFEVPEDKLAKLDAILTDAISSQVISFQMLEKLVGKCVSLSVAVPVAALYTHHMYKSLTVYQRTGGRRPNMDIDISPNGGLMFEMQRWLEVRKKFNGASWYRAEHKLLSLTGASDASSRGWGGLIR 421          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: A0A6H5KRN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN9_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 1.290e-94
Identity = 171/421 (40.62%), Postives = 240/421 (57.01%), Query Frame = 1
Query:    1 DERDFVPDRVQTAISFWANTILTDHPEREHLLRWLQ-GVRLDEFVNPDAKGTFQHRKYEGSSLTTTELPNHV-PDEFEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERATQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSI-LARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVVRI 1254
            D + F P  V+    FW + IL DHP R+ L  +++ GV L + + P  +G      Y           NH  P +F+ +V AE+  LL  GCI  W+ +  S+   RP + + L VE  KPRL +D R LN   +  PF MD V +VA  +  G Y  +LD  S FH++ L PSSW  FGL +KGV Y W VL FG+  SPY+YHTLSEA + + R KG P+LA+LDD W +N  AT    ++DQ  AA  AT +A+     CG F+S  KC L P T   YLG+ICDS+T  F IP +KLDKL  L+  A+ +  +S+  L+++AGKC SM+VA+ PASL+T+ M+  ++   +T    + LAR     +  LR E ++WL +    +   W   +H  + I G++DA S GWGG + I
Sbjct:   89 DSKGFAPGFVRAHAGFWEDYILRDHPLRDTLTSYIRDGVDLYDLLLPKFRGESPSLPYNVDHFPQRIFSNHRWPPKFDSFVDAEMQSLLARGCISRWADVKSSTGPVRPRMIMALSVETSKPRLIYDARPLNSCTRKIPFAMDTVARVASVASSGCYMTSLDDSSAFHHVLLRPSSWPLFGLSYKGVDYCWCVLPFGFSLSPYVYHTLSEAKAAFQRSKGAPSLAYLDDSWRSNFLATYGRPAQDQWLAAGEATHVAMLTSLFCGQFLSLKKCELRPVTAIQYLGIICDSETMTFRIPQEKLDKLHGLLRTALADGSVSYRTLQRVAGKCMSMTVAIRPASLWTHAMFAVLSAMDKTNQRQVDLAR---DAYADLRQEFQKWLSLTASSHEGPWQRASHLIVTIDGSSDASSLGWGGAINI 506          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 2.650e-88
Identity = 165/407 (40.54%), Postives = 232/407 (57.00%), Query Frame = 1
Query:   40 ISFWANTILTDHPEREHLLRWLQ-GVRLDEFVNPDAKGTFQHRKYEGSSLTTTELPNHVPDEFEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERATQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGG--LRYEMEQWLVVRKRMNGASWYDPTHHSIAIT-GATDAPSQGWGGVV 1248
            ++FW   IL DHP R+ LL +L+ GV   +F+    +G    + Y  +S      PN +P +F  +V +E+  L+  GC+  WS +   +   RP + + L VE  KPRL +D R LN   K  PF MD V +VA  +    Y  +LD  S FH+I + PSSW   G  + GV YVW VL FG   SP++YHTLSEA + +LR  GIP LA+LDD +LTN   TQ + + +Q  AA  AT +++ V Y CG F+S  KC   P+T + YLG++CDS T  F +P DKLD +  ++ +++    ISF  L+++AGK TSM+VA+ PASLYT  M+  +A   R    S L  V +    G  L  EM +WL +    +   W    H + A+T GA+DA S  WGGV+
Sbjct:    9 VAFWDEVILVDHPRRDSLLAYLRDGVNFQDFLIDSHRGPSAQQPYNVASFRQAVFPNRIPSKFVPFVESELQSLVARGCVAKWSDVKGPAGPVRPRLIMALSVEETKPRLIYDARPLNQFFKRMPFSMDTVARVANVASPRCYMTSLDDSSAFHHILIRPSSWPLLGFEYGGVDYVWCVLPFGLSISPFVYHTLSEAKAAFLRSLGIPALAYLDDSFLTNLEGTQGQPAREQWLAACEATHISVLVSYFCGNFLSPKKCDWRPTTVQKYLGMLCDSATATFRVPQDKLDAVHDILKESLAAGNISFRTLQRVAGKVTSMTVAIRPASLYTQAMFAALAALER----STLRSVDLTKDSGADLVGEMRKWLDITATTHEGPWQLARHFTAALTKGASDASSLAWGGVL 411          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: UPI001CF26769 (uncharacterized protein LOC114974393 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF26769)

HSP 1 Score: 213 bits (541), Expect = 8.860e-59
Identity = 135/420 (32.14%), Postives = 206/420 (49.05%), Query Frame = 1
Query:    1 DERDFVPDRVQTAISFWANTILTDHPEREHLLRWL-QGVRLDEFVNPDAKGTFQHRKYEGSSLTTTELPNHVPDE-FEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERA--TQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVV 1248
            D   F    +    S W  T+L  +P+R  L  ++ +GV + +F  P   G FQ + Y G++      PN    + F+ +++  I   + +G +     +        PH+ LPL VEP KPRL  D R+LNC  K+SP ++D +  + +       Q T D KSG+ ++ LHP S+ +FG+ WKG Y  +T L FGW +S YIYHT+  A + Y+R  G+P   ++DD  +   +   + H      ++ A+ A  +   V    GYF+  +K    PST   +LG IC S  + F +P DK      L  + + N  +S  NL+K AGK TS ++ VP A LYT   Y  IA   R+  + IL    +  H  LR E+  W  +        W    H  + I   +DA + GWGG++
Sbjct:    6 DPVSFTAGNLTVCASSW-KTVLKGNPKRNELWSYISEGVDVFQFFTP-FNGRFQGKTYRGNTPPKAVFPNAASCKGFDSFITRTIKDRVRNGSLRIVGKV---GYCEPPHLVLPLTVEPNKPRLCHDERFLNCWIKDSPLKLDYITDLIRYVGPNHMQTTFDDKSGYDHVRLHPRSFTFFGIEWKGWYLTYTTLPFGWKASAYIYHTIGMAATSYIRSLGVPCSQYIDDRHIGQLQLPLSYHNPHFSHSQLANMAAFITCAVLISLGYFIGLTKSCFEPSTAVRFLGYICHSTLQAFILPEDKKVSFAKLRDEILKNNSVSLKNLQKFAGKTTSFALVVPAAKLYTNTAYHAIAKANRSCTTKIL----ISEH--LRREILHWTFLDNWKGCLPWKSEVHRLVKIY--SDASNTGWGGIL 412          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: UPI001CF182C6 (uncharacterized protein LOC122960258 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF182C6)

HSP 1 Score: 192 bits (488), Expect = 1.390e-54
Identity = 111/310 (35.81%), Postives = 165/310 (53.23%), Query Frame = 1
Query:  331 LPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERA--TQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVVRI 1254
            +P+ VEP KPR+  D R+LNC  K+ PF +D +  + +    G +Q T D KSG+ ++ LHPSS  +FGL W+G Y+ +  L FGW +S YIYH++  A + Y+R  G+P   ++DD  +   R   TQ   S    + A  AT +A   F   GYF+   K  L PS    +LG ICDS+ + F +P +K DK  AL    + +  +S  N++K A K TS ++ VP A L+T   Y+ I+     G     A++++ P   LR E+  W  +       SW    H  I +T  +DA   GWGG + +
Sbjct:    1 MPITVEPSKPRMCHDERFLNCWIKDCPFPLDYITALPRYVGNGHFQTTFDDKSGYDHVRLHPSSSTFFGLEWEGWYFTFFTLPFGWKASAYIYHSIGLAATCYVRSLGVPCSQYIDDRHIGQLRLPHTQLSPSFSGFQLAEMATFIACVTFISLGYFIGLKKSCLVPSVAVRFLGYICDSEKQAFLLPQEKRDKFAALREDILSHKTVSLKNIQKFARKTTSFALLVPAAKLFTNTTYQTISR----GVKRADAQLRISPE--LRRELLHWRFLDSWEGFLSWKSERH--IHLTMHSDASFSGWGGCLNL 302          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: A0A8J9VMZ7_BRALA (Hypp551 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VMZ7_BRALA)

HSP 1 Score: 200 bits (508), Expect = 5.140e-53
Identity = 134/424 (31.60%), Postives = 205/424 (48.35%), Query Frame = 1
Query:    1 DERDFVPDRVQTAISFWANTILTDHPEREHLLRWLQG-VRLDEFVNPDAKGTFQHRKYEGSSLTTTELPN-HVPDEFEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDD-----FWLTNERATQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVVR 1251
            D + FV   +      W+  +     +   +L W+   V + +F+ P   G+F+ + Y  ++  +  LPN     E   ++ AEI   L  G I  W  +        PH+ LPL VEP KPR+ WDGR+LN   K+ PF++D V +  +   +G Y      KSG+ +I L   S  +FG  +K +++V   L FGW +S YI++T    +S Y R  G+PT+ ++DD       +T +R   +     QA+ A    C  LT   + GYF+S +KC + P+   V+LG   +S+   F  P DK  K   L    ++   I+   L+K  GKC SM++ VP A +YT    + +    + G      RVK+P +  +R EME W  V   M    W D  H SI I  A+D+    WG V+ 
Sbjct:  216 DPQQFVAGSLHNNTRMWSQ-LAPFSDKGSEVLNWITNRVDIRDFLTPFV-GSFKGQPYMSATPPSITLPNARNCAEHSEFIEAEIKGRLEDGSIKVWGKVGHCDP---PHLVLPLTVEPSKPRMCWDGRYLNNWTKDCPFKLDSVSEAPRMLRKGGYMTHTVEKSGYSHIYLTEDSRTFFGFKFKDLFFVHCSLPFGWSASAYIFNTTGSVISSYARHLGVPTMLYIDDRLNGEATITWQRPEVNPDPYTQAQIASYVMCELLT---RAGYFLSLNKCIIVPTQILVHLGAGLNSREGVFFFPEDKRRKFSTLREAILNAPMITLNALQKFVGKCVSMTLMVPGARIYTRRCNKLMGEMTQKGQ----LRVKLPEN--VRAEMEHWRFVDAEMKPVPWRDERHTSITI--ASDSSGYRWGAVLH 623          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: UPI000A2A81EA (uncharacterized protein LOC110245159 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A81EA)

HSP 1 Score: 188 bits (477), Expect = 2.730e-52
Identity = 113/353 (32.01%), Postives = 191/353 (54.11%), Query Frame = 1
Query:    1 DERDFVPDRVQTAISFWANTILTDHPEREHLLRWLQG-VRLDEFVNPDAKGTFQHRKYEGSSLTTTELPNHVPDE-FEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERATQHESSED--QARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQI 1047
            D + FV   V   +S W   IL  +P+ + +L +++  VR+ EF+ P  +G +Q + Y  +        N+     FE ++++ +S+ + +G I  W  +    +   PH+ +PL VEP KPRL  D R+LN   K+ PF++D +  + +   +G +Q T+D KSG+ +I L   S   FG  W+G ++V+  + FGW +S Y+YH++  A + ++R  G+P   ++DD  +  + +T+  S+ +      A +A  +A T     GYF+  +K SL+PS    +LG + DS+ + F IP DK  K   L    + N  +S   L++LAGK +S  +AVP A LY   ++R I
Sbjct:   14 DPKSFVAGEVHKHLSRWRE-ILEPNPKSKEILSYIENRVRVHEFIVP-FRGDYQGKFYNSAFPPRYSCVNNKSCRGFESFITSTVSERIRNGSISVWGKV---GACEPPHLVMPLTVEPSKPRLCHDERYLNLWTKDLPFRLDYISDLPRYVGKGHFQSTMDDKSGYDHIELSEESRTLFGFEWEGWFFVYNTIPFGWKASAYLYHSIGMAATSHIRALGVPCSQYIDDRHI-GQLSTRTGSTLEFSDLELAEAAIFIAATTLVSLGYFIGLAKSSLSPSRTVKFLGFLVDSERQAFIIPEDKKIKFANLREAILSNRAVSVKTLQRLAGKISSFCIAVPAALLYAREIFRAI 360          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: UPI001CF3D4FA (uncharacterized protein LOC122964315 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3D4FA)

HSP 1 Score: 196 bits (498), Expect = 6.510e-52
Identity = 136/427 (31.85%), Postives = 198/427 (46.37%), Query Frame = 1
Query:    1 DERDFVPDRVQTAISFWANTI-LTDHPEREHLLRWLQGVRLDEFVN-PDAKGTFQHRKYEGSSLTTTELPNHVP-DEFEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERATQHESS--------EDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVV 1248
            D   FV   +    + WA    L    +RE +L W+ G ++  F      KGTF+   Y+          N+V   +F  +V   +   L SG I   S +        PHI LPL VEP KPRL  D R+LN    + PF +D V  + +  +  +YQ  LD KSG+ ++ L   S  YFG+ W G ++ +  L FGW  SPY+YH+     S +LR  G+P+L ++DD      + +  +          E    AA SA  L      + GYF+  SK  L P     YLG   DS +  F +   K  K   LI + +++ ++S   L++L GKC S S+A+P A L+T  M   I+   RT          +   G LR E+  WL + +  +   W +  H  I +  ATDA   GWGGV+
Sbjct:  157 DPDHFVAGELHKHGANWAEIAKLAPSLQREEVLSWI-GNKVSIFPYCRHFKGTFKGEHYDSDQPPHRLFKNNVSCKQFREFVRTTLLSRLKSGAI---SLVGKIGQVTPPHIVLPLTVEPTKPRLCHDARYLNLWMLDKPFSLDRVTDLPRYVFRDSYQTVLDDKSGYDHLLLSDESRTYFGIQWGGWFFTYNSLPFGWKISPYVYHSTGLIASNFLRSLGVPSLLYIDDRHNGQLQVSLDKGQYNTLDFIDERNLAAAKSAVFLVAFHLTRLGYFLGLSKSILVPHKMVPYLGFFIDSSSEAFRLIPQKKQKFIGLIRETLNSRYVSVKTLQRLVGKCISFSLAIPAARLFTREMSAAISMCMRTSKP-------IAVQGALRDEIAHWLFLEEWDDPLPWREERHLQIEL--ATDASQTGWGGVI 570          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: UPI001CF36FDE (uncharacterized protein LOC114956330 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF36FDE)

HSP 1 Score: 192 bits (487), Expect = 1.260e-51
Identity = 134/414 (32.37%), Postives = 205/414 (49.52%), Query Frame = 1
Query:   58 TILTDHPEREHLLRWLQG-VRLDEFVNPDAKGTFQHRKYEGSSLTTTELPNHVP-DEFEVWVSAEISKLLNSGCIMPWSTL--VDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERAT---------QHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAI--DNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVVRI 1254
            TIL ++P +E +L W++  V + +F+ P  +G F+   Y+          NH    +F  +VS EI K + +G +  W  +  VD      P++ LPL VEP KPRL  D R+LN   ++ PF +DG+  V +  ++G+Y    D KSG+ ++ L  SS  Y G  W+  Y V   L FGW  SPYIYHT+  A + +    GIP   ++DD  LT E  T         +    E + +AA +A    L V  K GY +  SK  L P+T   YLG+I DS ++ F +P+ K++   A + ++I      +   +L++  GKC S S+AVP A L+   + R I    R   S  +   +      LR E E W  +        W    H  ++++  +DA   GWGGV+ +
Sbjct:   14 TILQENPRKEQILGWIRNKVNITDFIVP-YRGKFKGSMYKSDFPPRKCFSNHRSCKKFSDFVSKEILKRVKTGALRVWGRVGFVDP-----PYLVLPLTVEPTKPRLCLDARFLNLWMRDQPFTLDGLVDVPRYVYKGSYMSKCDDKSGYDHVLLTVSSQTYVGFQWESCYLVCATLPFGWKISPYIYHTIGSAATTFFPSIGIPCSLYIDDR-LTGEIMTGTGSWSVPPEARDKEYRYKAAMTALWCVLVVLAKLGYTIGISKSVLCPTTSLEYLGLIVDSVSQCFRVPSWKIEAW-AFLRESILAHKESVHVKSLQRFQGKCISFSLAVPAAKLFIREISRGIG---RVSSSGFVCLTQ-----DLREEFEYWRFLDTWEQSVPWRSEYHMRMSVS--SDASGFGWGGVIYL 409          
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Match: UPI001CF174B4 (uncharacterized protein LOC114948837 n=4 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF174B4)

HSP 1 Score: 190 bits (482), Expect = 2.470e-50
Identity = 121/410 (29.51%), Postives = 205/410 (50.00%), Query Frame = 1
Query:   28 VQTAISFWANTILTDHPEREHLLRWL-QGVRLDEFVNPDAKGTFQHRKYEGSSLTTTELPN-HVPDEFEVWVSAEISKLLNSGCIMPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDGVGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVLCFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNE-RATQHESSEDQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRRFEIPTDKLDKLEALI*QAIDNAWISFVNLEKLAGKCTSMSVAVPPASLYTYHMYRQIAHFRRTGGSSILARVKVPPHGGLRYEMEQWLVVRKRMNGASWYDPTHHSIAITGATDAPSQGWGGVV 1248
            +   +S W + +      +  L+  + + V++D    P  KG F+   Y+        L N  + ++F  +++  I   +++G +  W  + + +S   PH+ LPL VEP KPRL  D R+LN   K+ PF++D +  + +    G +Q + D K+G+ ++ LHPSS  +FGL W GVY+V+  L FGW +S YIYH L  AV+   R  G+P   ++DD  +    RA    +       A +A  +   +  + GYF++ +K    PS    +LG +CDS  + F +P DK  K   L  + + +  +    L++ AGK  S S+A+P   LYT   ++ I+    +  S   ARV+    G LR E+  W  +    +   W    H ++++   +DA ++ WG V+
Sbjct:   27 IHNHLSVWEHLLSGHGSSQVDLMEIIKESVKIDRLFKP-FKGNFKGSSYDSLFPPPMRLDNAKICEQFRDFITDTIVNWVDTGVLAVWGRVGEGTS---PHLVLPLTVEPSKPRLCHDERFLNLWIKDLPFKLDHLTDLPRYVLPGHFQTSFDDKNGYQHVLLHPSSRTFFGLQWNGVYFVFCTLPFGWKASAYIYHNLGLAVTSAARSFGVPVSQYIDDRHVGQLCRAPASSTLSPNRVLAVAAAYILCYLLAEAGYFVAIAKSQCVPSIVIRFLGFLCDSGRQAFLLPPDKKLKFSILREEILSSRCVGIKTLQRFAGKVVSFSLAIPGCKLYTRETFKAISRLHCS--SRPFARVE----GSLRTEVLYWRFLDDWKDCFPWRSELHVTVSLF--SDASTRAWGAVL 424          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1330.2474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLE3_9PHAE2.620e-16853.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRN9_9PHAE1.290e-9440.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIS8_9PHAE2.650e-8840.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
UPI001CF267698.860e-5932.14uncharacterized protein LOC114974393 n=1 Tax=Acrop... [more]
UPI001CF182C61.390e-5435.81uncharacterized protein LOC122960258 n=1 Tax=Acrop... [more]
A0A8J9VMZ7_BRALA5.140e-5331.60Hypp551 protein n=1 Tax=Branchiostoma lanceolatum ... [more]
UPI000A2A81EA2.730e-5232.01uncharacterized protein LOC110245159 n=1 Tax=Exaip... [more]
UPI001CF3D4FA6.510e-5231.85uncharacterized protein LOC122964315 n=2 Tax=Acrop... [more]
UPI001CF36FDE1.260e-5132.37uncharacterized protein LOC114956330 n=1 Tax=Acrop... [more]
UPI001CF174B42.470e-5029.51uncharacterized protein LOC114948837 n=4 Tax=Acrop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1330contigF-serratus_M_contig1330:103527..104780 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score91.7
Seed ortholog evalue4.6e-16
Seed eggNOG ortholog400682.PAC_15717048
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3A8SV@33154,3BVCW@33208,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size1254
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1330.2474.1prot_F-serratus_M_contig1330.2474.1Fucus serratus malepolypeptideF-serratus_M_contig1330 103857..104504 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929304.5507119-UTR-F-serratus_M_contig1330:103526..1038561622929304.5507119-UTR-F-serratus_M_contig1330:103526..103856Fucus serratus maleUTRF-serratus_M_contig1330 103527..103856 -
1690962791.454772-UTR-F-serratus_M_contig1330:103526..1038561690962791.454772-UTR-F-serratus_M_contig1330:103526..103856Fucus serratus maleUTRF-serratus_M_contig1330 103527..103856 -
1622929304.5756874-UTR-F-serratus_M_contig1330:104504..1047801622929304.5756874-UTR-F-serratus_M_contig1330:104504..104780Fucus serratus maleUTRF-serratus_M_contig1330 104505..104780 -
1690962791.4705298-UTR-F-serratus_M_contig1330:104504..1047801690962791.4705298-UTR-F-serratus_M_contig1330:104504..104780Fucus serratus maleUTRF-serratus_M_contig1330 104505..104780 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929304.5644062-CDS-F-serratus_M_contig1330:103856..1045041622929304.5644062-CDS-F-serratus_M_contig1330:103856..104504Fucus serratus maleCDSF-serratus_M_contig1330 103857..104504 -
1690962791.4633842-CDS-F-serratus_M_contig1330:103856..1045041690962791.4633842-CDS-F-serratus_M_contig1330:103856..104504Fucus serratus maleCDSF-serratus_M_contig1330 103857..104504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1330.2474.1

>prot_F-serratus_M_contig1330.2474.1 ID=prot_F-serratus_M_contig1330.2474.1|Name=mRNA_F-serratus_M_contig1330.2474.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MPWSTLVDSSSSPRPHICLPLGVEPRKPRLFWDGRWLNCMCKNSPFQMDG
VGKVAQCSWEGAYQVTLDHKSGFHNIPLHPSSWRYFGLCWKGVYYVWTVL
CFGWCSSPYIYHTLSEAVSQYLRGKGIPTLAWLDDFWLTNERATQHESSE
DQARAAHSATCLALTVFYKCGYFMSFSKCSLAPSTRRVYLGVICDSQTRR
FEIPTDKLDKLEALI*
back to top

mRNA from alignment at F-serratus_M_contig1330:103527..104780-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1330.2474.1 ID=mRNA_F-serratus_M_contig1330.2474.1|Name=mRNA_F-serratus_M_contig1330.2474.1|organism=Fucus serratus male|type=mRNA|length=1254bp|location=Sequence derived from alignment at F-serratus_M_contig1330:103527..104780- (Fucus serratus male)
GACGAAAGGGACTTCGTCCCGGACCGCGTACAAACCGCGATTAGTTTCTG GGCAAACACAATTTTGACCGACCACCCCGAACGGGAACATCTTCTTCGGT GGCTCCAAGGCGTCCGTTTGGACGAGTTTGTCAACCCCGACGCTAAGGGT ACTTTTCAACACAGGAAATACGAGGGCAGCAGCCTGACAACGACAGAACT ACCAAATCATGTACCCGACGAGTTCGAAGTTTGGGTCTCTGCAGAAATTT CCAAACTACTTAACAGCGGCTGCATCATGCCATGGTCTACATTGGTCGAT TCCTCTTCTTCTCCTCGACCCCACATCTGCCTGCCGCTGGGCGTAGAACC CAGGAAGCCAAGATTGTTTTGGGACGGCCGATGGCTCAACTGCATGTGTA AAAACTCGCCCTTCCAAATGGACGGCGTAGGAAAGGTCGCACAGTGCTCC TGGGAAGGAGCATATCAGGTCACCTTAGATCACAAATCAGGTTTCCACAA CATACCCCTTCATCCTTCTTCCTGGAGATATTTTGGGCTATGCTGGAAAG GTGTCTATTACGTCTGGACTGTCCTATGCTTCGGGTGGTGCTCTTCCCCA TACATCTACCACACCCTAAGCGAGGCGGTAAGTCAGTACCTCCGTGGAAA AGGCATCCCGACCCTGGCGTGGCTGGACGACTTCTGGTTAACGAACGAGA GAGCAACACAGCACGAATCCTCAGAAGACCAAGCACGAGCCGCCCACTCA GCCACCTGCCTGGCCCTCACGGTGTTCTACAAATGCGGCTACTTCATGTC GTTTTCCAAGTGCTCTCTCGCGCCGTCTACACGCCGCGTTTACCTAGGCG TTATTTGCGACTCACAAACGCGCCGCTTCGAGATCCCGACGGACAAGCTA GATAAACTGGAAGCTCTCATATGACAGGCCATTGACAACGCTTGGATCTC ATTTGTTAATTTAGAAAAACTTGCTGGTAAATGCACTAGCATGAGCGTCG CAGTACCGCCCGCTAGCCTGTACACATACCACATGTACCGCCAGATAGCA CATTTCCGACGCACCGGTGGATCTTCAATCCTCGCACGCGTGAAGGTTCC TCCTCACGGAGGTCTTAGGTACGAGATGGAACAATGGCTGGTGGTTAGGA AGCGCATGAACGGGGCCTCCTGGTACGACCCGACCCATCACTCCATTGCT ATAACAGGCGCCACCGATGCACCATCTCAGGGATGGGGAGGGGTCGTTAG GATT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1330:103527..104780-

>mRNA_F-serratus_M_contig1330.2474.1 ID=mRNA_F-serratus_M_contig1330.2474.1|Name=mRNA_F-serratus_M_contig1330.2474.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig1330:103527..104780- (Fucus serratus male)
ATGCCATGGTCTACATTGGTCGATTCCTCTTCTTCTCCTCGACCCCACAT
CTGCCTGCCGCTGGGCGTAGAACCCAGGAAGCCAAGATTGTTTTGGGACG
GCCGATGGCTCAACTGCATGTGTAAAAACTCGCCCTTCCAAATGGACGGC
GTAGGAAAGGTCGCACAGTGCTCCTGGGAAGGAGCATATCAGGTCACCTT
AGATCACAAATCAGGTTTCCACAACATACCCCTTCATCCTTCTTCCTGGA
GATATTTTGGGCTATGCTGGAAAGGTGTCTATTACGTCTGGACTGTCCTA
TGCTTCGGGTGGTGCTCTTCCCCATACATCTACCACACCCTAAGCGAGGC
GGTAAGTCAGTACCTCCGTGGAAAAGGCATCCCGACCCTGGCGTGGCTGG
ACGACTTCTGGTTAACGAACGAGAGAGCAACACAGCACGAATCCTCAGAA
GACCAAGCACGAGCCGCCCACTCAGCCACCTGCCTGGCCCTCACGGTGTT
CTACAAATGCGGCTACTTCATGTCGTTTTCCAAGTGCTCTCTCGCGCCGT
CTACACGCCGCGTTTACCTAGGCGTTATTTGCGACTCACAAACGCGCCGC
TTCGAGATCCCGACGGACAAGCTAGATAAACTGGAAGCTCTCATATGAAT
GCCATGGTCTACATTGGTCGATTCCTCTTCTTCTCCTCGACCCCACATCT
GCCTGCCGCTGGGCGTAGAACCCAGGAAGCCAAGATTGTTTTGGGACGGC
CGATGGCTCAACTGCATGTGTAAAAACTCGCCCTTCCAAATGGACGGCGT
AGGAAAGGTCGCACAGTGCTCCTGGGAAGGAGCATATCAGGTCACCTTAG
ATCACAAATCAGGTTTCCACAACATACCCCTTCATCCTTCTTCCTGGAGA
TATTTTGGGCTATGCTGGAAAGGTGTCTATTACGTCTGGACTGTCCTATG
CTTCGGGTGGTGCTCTTCCCCATACATCTACCACACCCTAAGCGAGGCGG
TAAGTCAGTACCTCCGTGGAAAAGGCATCCCGACCCTGGCGTGGCTGGAC
GACTTCTGGTTAACGAACGAGAGAGCAACACAGCACGAATCCTCAGAAGA
CCAAGCACGAGCCGCCCACTCAGCCACCTGCCTGGCCCTCACGGTGTTCT
ACAAATGCGGCTACTTCATGTCGTTTTCCAAGTGCTCTCTCGCGCCGTCT
ACACGCCGCGTTTACCTAGGCGTTATTTGCGACTCACAAACGCGCCGCTT
CGAGATCCCGACGGACAAGCTAGATAAACTGGAAGCTCTCATATGA
back to top