mRNA_F-serratus_M_contig133.2467.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig133.2467.1
Unique NamemRNA_F-serratus_M_contig133.2467.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Match: D7G8I4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8I4_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 3.900e-141
Identity = 222/382 (58.12%), Postives = 282/382 (73.82%), Query Frame = 3 
Query:   12 RPCFLIAVAW--CATPICQGWIPLASSGIYPQTSTFGLKSLVSCCITYRH---VSLATRKRVTRG-LMLASSGKSRDPEEV---ESKEGERR------PTARMIDTPIPDYLIDMLKEAGEIDENGKPLNDFFDPNDDDQFGSKRAREQAAKEKENDYYDVPFGEMLYEGKR--ENNEDTGTLMDTTINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAEQASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKINIPQGGGTHITVDEYKLLLDNVVEGGDSSPARRLFDENRTSNRWVGQRENEVSPAFREETARLIERNNRGFGWRDGPPIVGRGEGELPIDAAHIGGKIFGEDAFT 1106
            RPC L A A   C     QGW P+A       T   GL S  +    +     V+ A   + TR    +A++   RDP E    E+KEG+ +      P  +M D+PIP+YLIDMLKE+G++DE+GKP+NDFFDP++DD FG++R R++  KE+E  Y DVPFG+ML+EGK   EN +DTG+LMDT+INNAV E+GFP+EFFLD LCRWGV  PIN + RLGD+IDAEQA+ LCEALTGLDAADVRDNYLD++LEDL++DLDIPLPDLFQACA  KIN+P+GG THIT+DEYKLLLD VV+GG++S AR+LFDE+R +NRW GQ+E       +E+ AR I++NN GFGWR+GPPI+G GEGELP++ AHIGG+IFGE+ F 
Sbjct:    5 RPCALAAAATTCCCLRFSQGWNPVA-------TLNPGLTSAAARATPWSRAARVASARPSQHTRARAAIAAAVAPRDPWEAAGQEAKEGDEKGKKKAMPRLKMDDSPIPEYLIDMLKESGDVDEDGKPVNDFFDPDEDDTFGTQRERDRL-KEEELYYNDVPFGDMLFEGKAGGENAQDTGSLMDTSINNAVFEYGFPVEFFLDMLCRWGVTLPINQDRRLGDMIDAEQAAALCEALTGLDAADVRDNYLDDSLEDLSFDLDIPLPDLFQACAAQKINLPKGGDTHITIDEYKLLLDTVVDGGETSRARKLFDESRVTNRWTGQKEANSRELNQEDIAREIQKNNAGFGWREGPPILGDGEGELPLEQAHIGGRIFGEEIFA 378
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BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Match: A0A835ZEP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 9.670e-31
Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = 3 
Query:  444 DVPFGEMLYEGKRENNEDTGTLMDTTINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAEQASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKINIPQGGGTHITVDEYKLLLDNV 857
            D+P G +L         D G L D T+ +   ++ FP+EF  D LCRWGV PPI  + +LG L++ EQA  + EALT +D A V D YLD+T+E+LA+ LD+P  D+F  C   + N+P G  TH+T +EY+ LL ++
Sbjct:    2 DIPSGSLLGNMAFNPERDEGGLGDVTLADIADDYNFPVEFIYDVLCRWGVSPPIKLDDKLGSLVNGEQAFAVVEALTSVDPATVHDFYLDDTIEELAWALDVPPADIFAVCGRRRFNLPLGAETHLTNEEYRFLLKDL 139
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BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Match: A0A7S2SBT4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBT4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.260e-18
Identity = 42/114 (36.84%), Postives = 71/114 (62.28%), Query Frame = 3 
Query:  519 TINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAEQASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKINIPQGGGTHITVDEYKLLLDNVV 860
            T+     ++ FPLEF ++++C  GV+PPI+P+ ++ DL+  E+   L EALT +D A+  + + D TL ++A   ++PL  +FQ CA +  N+P G  TH+  DEY +L+  + 
Sbjct:  165 TLKEIAKDYDFPLEFLVNSVCDLGVVPPIDPDKKISDLLSGERIYALVEALTTIDPAEAYERFTDHTLGEIADYQEVPLSHIFQICADYGFNLPLGVRTHLKNDEYSVLMKEIT 278
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BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Match: F0YKG5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKG5_AURAN)

HSP 1 Score: 82.4 bits (202), Expect = 4.870e-13
Identity = 39/111 (35.14%), Postives = 66/111 (59.46%), Query Frame = 3 
Query:  513 DTTINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAEQASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKINIPQGGGTHITVDEYKLL 845
            D+T+ +   ++ FP+ +  D +  +G+ PPI  + R+ D++DA+QA  L EA+T LDAA+V D Y+   L  +A  L+ PL ++F AC      +P G  T +  ++Y+ L
Sbjct:  167 DSTVADVADDYRFPISYVADAILGFGIPPPIRDDARIADILDADQAFALLEAVTSLDAAEVEDAYVAFDLARVAGLLEAPLAEVFAACVDEGFGLPHGVETQLRREQYEAL 277
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BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Match: A0A7S2L468_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L468_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.900e-12
Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 3 
Query:  477 KRENNEDTGTLMDTTINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAEQASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKINIPQGGGTHITVDEYKLL 845
            K++N  + G L D+T+N    ++  P  +  D +C WGV PPI+ +++LGD++  EQA  L EAL   D +D+ D Y    L   A + D+ + ++F+       ++P G  + +  D+ ++L
Sbjct:  201 KQQNAREEGYLGDSTLNEIASDYSIPSFYLADIVCSWGVSPPIDMDMKLGDVLLGEQAFALLEALNSFDPSDLYDLYSRYDLRSFAGEYDVEMKNVFEFAVKEGFSLPFGVHSRLRKDQVEML 323
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BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Match: A0A7S4A635_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A635_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 5.290e-12
Identity = 41/128 (32.03%), Postives = 68/128 (53.12%), Query Frame = 3 
Query:  513 DTTINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAEQASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKINIPQGGGTHITVDEYKLLLDNVVEGGDSSPARRLF 896
            D T+    +++ FP+ +  D +  +GV PPI+    + DL+DA+QA  L EA+T LDA++V D Y+   L+  A  L+  L ++F  C  +   +P G  T +  D++  +   +  G  S  AR  F
Sbjct:  107 DLTVEQVAVDYRFPVAYVADVITGFGVQPPISDAAVIRDLLDADQAFALLEAVTSLDASEVDDAYVSFGLDGCARRLEADLAEVFALCVDNNFALPHGVETRLRRDQFDTIARTL--GWRSDEARLPF 232
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig133.2467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8I4_ECTSI3.900e-14158.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZEP7_9STRA9.670e-3143.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SBT4_9STRA2.260e-1836.84Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0YKG5_AURAN4.870e-1335.14Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2L468_9STRA2.900e-1230.89Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4A635_9STRA5.290e-1232.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig133contigF-serratus_M_contig133:584434..588595 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.0
Seed ortholog evalue1.5e-13
Seed eggNOG ortholog44056.XP_009040959.1
Preferred namePSEN1
KEGG koko:K04505,ko:K04522,ko:K06060
KEGG Pathwayko04310,ko04330,ko04722,ko05010,ko05165,map04310,map04330,map04722,map05010,map05165
KEGG ModuleM00682
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000041,GO:0000045,GO:0000122,GO:0000186,GO:0000323,GO:0000775,GO:0000776,GO:0001501,GO:0001505,GO:0001568,GO:0001654,GO:0001666,GO:0001708,GO:0001754,GO:0001756,GO:0001764,GO:0001773,GO:0001775,GO:0001919,GO:0001921,GO:0001932,GO:0001933,GO:0001934,GO:0001942,GO:0001944,GO:0001945,GO:0001946,GO:0001947,GO:0002009,GO:0002027,GO:0002036,GO:0002038,GO:0002119,GO:0002164,GO:0002244,GO:0002252,GO:0002253,GO:0002263,GO:0002265,GO:0002274,GO:0002275,GO:0002283,GO:0002285,GO:0002286,GO:0002366,GO:0002376,GO:0002429,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003143,GO:0003407,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005640,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005790,GO:0005791,GO:0005794,GO:0005798,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005929,GO:0005938,GO:0006355,GO:0006357,GO:0006464,GO:0006469,GO:0006486,GO:0006508,GO:0006509,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006825,GO:0006836,GO:0006839,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006903,GO:0006909,GO:0006914,GO:0006915,GO:0006928,GO:0006936,GO:0006941,GO:0006950,GO:0006955,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007033,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007175,GO:0007176,GO:0007219,GO:0007220,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0007507,GO:0007548,GO:0007568,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007614,GO:0007626,GO:0008013,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008283,GO:0008284,GO:0008306,GO:0008324,GO:0008406,GO:0008544,GO:0008593,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009266,GO:0009581,GO:0009582,GO:0009605,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009952,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010001,GO:0010033,GO:0010243,GO:0010453,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010942,GO:0010958,GO:0010975,GO:0010976,GO:0010977,GO:0012501,GO:0012505,GO:0012506,GO:0014002,GO:0015031,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0015630,GO:0015677,GO:0015695,GO:0015696,GO:0015833,GO:0015871,GO:0016020,GO:0016021,GO:0016043,GO:0016048,GO:0016055,GO:0016079,GO:0016080,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016324,GO:0016477,GO:0016485,GO:0016787,GO:0017015,GO:0017156,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019866,GO:0019867,GO:0019904,GO:0021532,GO:0021537,GO:0021543,GO:0021782,GO:0021795,GO:0021870,GO:0021885,GO:0021895,GO:0021904,GO:0021915,GO:0021953,GO:0021987,GO:0022008,GO:0022029,GO:0022404,GO:0022405,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030001,GO:0030003,GO:0030016,GO:0030017,GO:0030018,GO:0030030,GO:0030054,GO:0030097,GO:0030099,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030165,GO:0030182,GO:0030318,GO:0030323,GO:0030324,GO:0030326,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030587,GO:0030659,GO:0030667,GO:0030900,GO:0031090,GO:0031149,GO:0031150,GO:0031154,GO:0031224,GO:0031226,GO:0031293,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0031344,GO:0031345,GO:0031346,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031594,GO:0031674,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032091,GO:0032092,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032469,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032890,GO:0032892,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0033158,GO:0033160,GO:0033267,GO:0033554,GO:0033619,GO:0033673,GO:0033674,GO:0034205,GO:0034220,GO:0034641,GO:0034645,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035050,GO:0035107,GO:0035108,GO:0035113,GO:0035220,GO:0035222,GO:0035239,GO:0035253,GO:0035282,GO:0035295,GO:0035333,GO:0035577,GO:0036064,GO:0036211,GO:0036230,GO:0036269,GO:0036293,GO:0036303,GO:0036477,GO:0040011,GO:0040028,GO:0042058,GO:0042059,GO:0042063,GO:0042110,GO:0042119,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042303,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042391,GO:0042461,GO:0042462,GO:0042500,GO:0042582,GO:0042592,GO:0042633,GO:0042659,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0042982,GO:0042987,GO:0042995,GO:0043005,GO:0043009,GO:0043010,GO:0043011,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043086,GO:0043170,GO:0043198,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043270,GO:0043292,GO:0043299,GO:0043312,GO:0043392,GO:0043393,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043413,GO:0043473,GO:0043523,GO:0043524,GO:0043549,GO:0043588,GO:0043589,GO:0043603,GO:0043949,GO:0044057,GO:0044070,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044449,GO:0044459,GO:0044463,GO:0044464,GO:0044671,GO:0045055,GO:0045121,GO:0045137,GO:0045165,GO:0045176,GO:0045177,GO:0045184,GO:0045202,GO:0045296,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045732,GO:0045747,GO:0045859,GO:0045860,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046530,GO:0046649,GO:0046822,GO:0046824,GO:0046873,GO:0046903,GO:0046907,GO:0046983,GO:0048066,GO:0048143,GO:0048167,GO:0048190,GO:0048286,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048538,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048580,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048598,GO:0048608,GO:0048609,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048708,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048837,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050435,GO:0050673,GO:0050730,GO:0050732,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050773,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050804,GO:0050806,GO:0050808,GO:0050818,GO:0050820,GO:0050839,GO:0050851,GO:0050852,GO:0050877,GO:0050890,GO:0050896,GO:0050931,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051336,GO:0051338,GO:0051340,GO:0051347,GO:0051348,GO:0051352,GO:0051402,GO:0051438,GO:0051444,GO:0051563,GO:0051580,GO:0051582,GO:0051588,GO:0051590,GO:0051604,GO:0051606,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051952,GO:0051954,GO:0051955,GO:0051957,GO:0051960,GO:0051961,GO:0051962,GO:0051966,GO:0052547,GO:0052548,GO:0055037,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060047,GO:0060048,GO:0060070,GO:0060075,GO:0060173,GO:0060249,GO:0060255,GO:0060284,GO:0060291,GO:0060322,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060998,GO:0060999,GO:0061053,GO:0061062,GO:0061097,GO:0061099,GO:0061136,GO:0061371,GO:0061458,GO:0061900,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070001,GO:0070011,GO:0070050,GO:0070085,GO:0070201,GO:0070482,GO:0070588,GO:0070765,GO:0070838,GO:0070887,GO:0070925,GO:0070997,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072358,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0080090,GO:0090087,GO:0090092,GO:0090287,GO:0090316,GO:0090596,GO:0090647,GO:0090702,GO:0097028,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098609,GO:0098655,GO:0098657,GO:0098660,GO:0098662,GO:0098687,GO:0098771,GO:0098773,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098857,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099120,GO:0099177,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0106027,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0140029,GO:0140096,GO:0150034,GO:0198738,GO:1900006,GO:1900180,GO:1900182,GO:1901135,GO:1901137,GO:1901184,GO:1901185,GO:1901214,GO:1901215,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901800,GO:1902041,GO:1902042,GO:1902043,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902903,GO:1902905,GO:1903050,GO:1903051,GO:1903052,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903364,GO:1903506,GO:1903507,GO:1903508,GO:1903522,GO:1903789,GO:1903793,GO:1903827,GO:1903829,GO:1903844,GO:1903959,GO:1903961,GO:1904589,GO:1904591,GO:1904645,GO:1904646,GO:1904796,GO:1904797,GO:1904951,GO:1905037,GO:1905114,GO:1905906,GO:1905908,GO:1990535,GO:2000026,GO:2000058,GO:2000059,GO:2000060,GO:2000112,GO:2000113,GO:2000272,GO:2000677,GO:2000678,GO:2001023,GO:2001025,GO:2001141,GO:2001233,GO:2001234,GO:2001235,GO:2001236,GO:2001237,GO:2001238
EggNOG free text desc.subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors
EggNOG OGsKOG2736@1,KOG2736@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_003130.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Exons6
Model size1367
Cds size984
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig133.2467.1prot_F-serratus_M_contig133.2467.1Fucus serratus malepolypeptideF-serratus_M_contig133 584628..588406 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929303.6411989-UTR-F-serratus_M_contig133:584433..5846271622929303.6411989-UTR-F-serratus_M_contig133:584433..584627Fucus serratus maleUTRF-serratus_M_contig133 584434..584627 +
1690962791.0366771-UTR-F-serratus_M_contig133:584433..5846271690962791.0366771-UTR-F-serratus_M_contig133:584433..584627Fucus serratus maleUTRF-serratus_M_contig133 584434..584627 +
1622929303.7510366-UTR-F-serratus_M_contig133:588406..5885951622929303.7510366-UTR-F-serratus_M_contig133:588406..588595Fucus serratus maleUTRF-serratus_M_contig133 588407..588595 +
1690962791.1081138-UTR-F-serratus_M_contig133:588406..5885951690962791.1081138-UTR-F-serratus_M_contig133:588406..588595Fucus serratus maleUTRF-serratus_M_contig133 588407..588595 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929303.6547596-CDS-F-serratus_M_contig133:584627..5846981622929303.6547596-CDS-F-serratus_M_contig133:584627..584698Fucus serratus maleCDSF-serratus_M_contig133 584628..584698 +
1690962791.0540807-CDS-F-serratus_M_contig133:584627..5846981690962791.0540807-CDS-F-serratus_M_contig133:584627..584698Fucus serratus maleCDSF-serratus_M_contig133 584628..584698 +
1622929303.6751578-CDS-F-serratus_M_contig133:586023..5861861622929303.6751578-CDS-F-serratus_M_contig133:586023..586186Fucus serratus maleCDSF-serratus_M_contig133 586024..586186 +
1690962791.063702-CDS-F-serratus_M_contig133:586023..5861861690962791.063702-CDS-F-serratus_M_contig133:586023..586186Fucus serratus maleCDSF-serratus_M_contig133 586024..586186 +
1622929303.690821-CDS-F-serratus_M_contig133:586413..5865681622929303.690821-CDS-F-serratus_M_contig133:586413..586568Fucus serratus maleCDSF-serratus_M_contig133 586414..586568 +
1690962791.0738778-CDS-F-serratus_M_contig133:586413..5865681690962791.0738778-CDS-F-serratus_M_contig133:586413..586568Fucus serratus maleCDSF-serratus_M_contig133 586414..586568 +
1622929303.7104878-CDS-F-serratus_M_contig133:586949..5870581622929303.7104878-CDS-F-serratus_M_contig133:586949..587058Fucus serratus maleCDSF-serratus_M_contig133 586950..587058 +
1690962791.0815098-CDS-F-serratus_M_contig133:586949..5870581690962791.0815098-CDS-F-serratus_M_contig133:586949..587058Fucus serratus maleCDSF-serratus_M_contig133 586950..587058 +
1622929303.7213883-CDS-F-serratus_M_contig133:587336..5874311622929303.7213883-CDS-F-serratus_M_contig133:587336..587431Fucus serratus maleCDSF-serratus_M_contig133 587337..587431 +
1690962791.0898535-CDS-F-serratus_M_contig133:587336..5874311690962791.0898535-CDS-F-serratus_M_contig133:587336..587431Fucus serratus maleCDSF-serratus_M_contig133 587337..587431 +
1622929303.734818-CDS-F-serratus_M_contig133:588015..5884061622929303.734818-CDS-F-serratus_M_contig133:588015..588406Fucus serratus maleCDSF-serratus_M_contig133 588016..588406 +
1690962791.0991426-CDS-F-serratus_M_contig133:588015..5884061690962791.0991426-CDS-F-serratus_M_contig133:588015..588406Fucus serratus maleCDSF-serratus_M_contig133 588016..588406 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig133.2467.1

>prot_F-serratus_M_contig133.2467.1 ID=prot_F-serratus_M_contig133.2467.1|Name=mRNA_F-serratus_M_contig133.2467.1|organism=Fucus serratus male|type=polypeptide|length=328bp
MLASSGKSRDPEEVESKEGERRPTARMIDTPIPDYLIDMLKEAGEIDENG
KPLNDFFDPNDDDQFGSKRAREQAAKEKENDYYDVPFGEMLYEGKRENNE
DTGTLMDTTINNAVIEFGFPLEFFLDTLCRWGVMPPINPNVRLGDLIDAE
QASGLCEALTGLDAADVRDNYLDETLEDLAYDLDIPLPDLFQACAVHKIN
IPQGGGTHITVDEYKLLLDNVVEGGDSSPARRLFDENRTSNRWVGQRENE
VSPAFREETARLIERNNRGFGWRDGPPIVGRGEGELPIDAAHIGGKIFGE
DAFTRFDDEERGEVEDDMAELFDFDLE*
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mRNA from alignment at F-serratus_M_contig133:584434..588595+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig133.2467.1 ID=mRNA_F-serratus_M_contig133.2467.1|Name=mRNA_F-serratus_M_contig133.2467.1|organism=Fucus serratus male|type=mRNA|length=4162bp|location=Sequence derived from alignment at F-serratus_M_contig133:584434..588595+ (Fucus serratus male)
TGAGCTGGTATCGACCTTGCTTCCTCATTGCAGTGGCGTGGTGTGCCACG
CCCATCTGTCAGGGATGGATTCCATTGGCTTCCTCCGGAATTTATCCGCA
AACTTCGACCTTTGGGCTGAAATCCCTCGTTTCTTGCTGCATTACCTACA
GACATGTGTCTTTGGCTACTCGAAAACGCGTAACCCGAGGATTGATGCTG
GCGTCGTCGGGCAAGTCAAGGGACCCCGAGGAAGTAGAGTCCAAGGAGGG
CGAGAGAAGGCCCACGTGAGCACCGCAGTACCATAATTTATTATCGATGG
GGTGTTGTCATTTATACCCTCATATAAGGAGTTCTCGTGTTGTACCATAG
GGCTGCTGTCTTTTTGCTTTGAATTATACAAGCTTTTTTTTTcTTCTAAT
TTTCACATACTCTGTACCTGGTATGATGTAAAAAAATCCAGCCCGTGGTC
ACAAGGTAGAAAAACACCATCCGGAAGGAAAGAACGTACGACGTACTCTA
CATACTATTAATAAGAGAAAACGACAATGGTAAAAAAAAATACTCGGAAA
AAGCGACATCTCCAAATAAACAAAAGGAGTACTACTGTATGGTTCTTATA
GTCAGTCTAAATATCACTGAGGATCCTATTAGATAGACAGACGCACGGGC
GAAATCCCAAATAATAAACACCCTAGGGTCATTCGTCCATAAAACACTCT
CCATCCACAGAGCTTGACTATCCGGAGCTTGTCAGATTCGATACGGCTCA
AAGGGTTTTTAGCTATCAAATTTGTAGGAACGTCATGCGTACTGCAGCAT
TCCGCACCACCGATTGTTGCAGCATTTCCAACCGAAATTCTCGTCAGGAA
TTCATCCATTCATCCAGGAACAAAGCTACTGGTACAGTATTATTATTAGC
TCCCATTAATACCAGGTATAGTACAGTACAGCAGTACAGCAGCTCATTAA
GATTTGGACCCAGTCCTACCATCGACGCCCATTGTATTGCACCACGGGGT
TAAGGCCAATTGACGAATACCACAGAGTAGTTCATTCTTACTTCGTCCCA
GTACAGAATAAGATAAACCGAGAAAATGACGCGCCTGAAAATTTGGTCGT
ACGAGACGTCTTCGGCCATCCCGTCTCGCTTGAGCCCGCTCATTCTCCAC
ACACTCAGGCCGAATCTGGTGCTTAATCACGGACTCCTTTCTTTCCTCCC
GCTTTCCGCGACGGTGTTCATTCATGCCGCCAACCGCCATCGGGTCAGTC
CCGAGTTGATCGGGTCACGAAACAACGATAACCACACTACTTTACGTGGT
CTGCCGGTTGTATCATTGAAGCTGTCTGACCTCTTGACTAGATCTTACCT
TGAATGTATCAAGCACAAACGCCCTCAAAAGATGGCTGTCCTGTTAAGAA
ACGACAGTCAGCAGTCGCTAATACCGTAAAGTGCATCGTGGATCTGTACT
CTCAAAACAACTATAATAACTGTAGCACGTACTTATTTTTGTATAGAGTT
ACAGCACTGTTATTGAGCCCCTGAATCTCAAACTCCGCCTCCGGATCCTC
GCTATTCCTTGCCCCCCCCCCCGCCCCCCCCATACGACAGCGCCAGGATG
ATCGACACTCCCATTCCGGACTACTTGATCGATATGCTCAAAGAGGCTGG
AGAGATCGACGAGAACGGCAAGCCGCTCAACGACTTTTTCGACCCGAACG
ACGATGACCAATTCGGCTCGAAGCGTGCGCGGGAGCAAGCCGCCAAAGAA
AAGGTGCCTGTGCTGCGGCAACCTCTTCCCCAGTCAGTAAACGCCTTCAT
TCGTGGGTTGAGGAAATATACGTACCCTCGCTCTTAAGTTACACGAGCAG
TCTGGCTACAAAAACCGTCTTTGAGGCACCCATGCCAAGCCCCTTCGGGT
TCGAGCGTCCGTTCCGTCCGTTCAGTACCTGGTAAATATTGTGCCTTTCA
TCAGACGGATGCCCTCAATCGGCTCACCAGGAGAATGACTACTACGACGT
GCCGTTCGGGGAAATGCTTTATGAGGGCAAAAGGGAAAACAATGAAGACA
CGGGAACTCTCATGGACACCACGATCAACAACGCGGTTATCGAATTCGGG
TTTCCGCTTGAATTTTTCCTGGATACACTCTGCAGGTACACGTAGCTCTG
CACCTAGGGATGCCGTCCGTTACTTTATTGCCTTGTCAAGAGTGTTCCAA
GCGGACCTCGTTTGAAATCTCGAGAAAACCAGCTAGCTACTATGGCGAAT
CTAGGAAATATCTCGCGGCCAACTTGACGGTCCAAAACTCGCGAAATTCC
CTTCATATAGCCTGATATCCTGACATAGTGGAGCAGAGAGGCAAGAATAC
TCCCCTTCCTTTCCCTTCCCTCATCGCGCCCGTTACAAAAAACGGTTATC
TGAAGATGGACGGTCACTCAACCACCCACCGGCTCCTAACCACCATATTA
ATAGTGTTCATTGTGTTTGCGTTATTGGGTTACGTGTGTACTGTACCTGG
TACACTTTTGGTGCAGGTGGGGTGTTATGCCGCCAATAAACCCGAACGTT
CGGTTAGGGGATCTCATCGACGCGGAGCAAGCAAGCGGACTCTGCGAAGC
CCTCACGGGTCTCGACGCGGCAGATGTGAGAGGGAAGCGATGGCGTAACG
TACGCGAGATGCGGCGGCGCGCAACCCCCCTTCCCAACAAATGTCTTGAC
CCAGCTGGTGGGATAATCGCTCCGCCTTAGTTATTTGTACTTGCAGTAAA
TATTGCTGGCAAGTAAACTACCTGGGAACGCGACGCCGACTCACTCGTCC
AAGGGTGACTCAAATGTTGTATTTTTTCATCCGGTCGTCACCATCAACCC
CGACGTTTTAACACTCCGCGACGCTCGCCTTGAAACCACCGCCACAACAA
CAGGTCAGAGATAACTACCTCGACGAAACCCTGGAGGACTTGGCATACGA
TCTTGATATCCCGTTGCCAGACCTTTTCCAAGCTTGCGCGGTTCATAAGT
GAGTACCTGTCCAGCAGTAAACATAGGAAGCGGTACCGGTCCATCCGTCC
TCTCTTGTCCGTGGGTTAGCCTTCTTTAGCTGTAGGAGCTGCGCTGAGGC
TCTTCTACTATTTTAGATCCCCCCGATAACGTTCCTTGGTTCTGGCGTGT
GCGAAAGCGTTCAAGCGAGGCATGAGTGACGCATTTATTGCACCAGAGCG
GACACGGCTTATCGGTACCTGTAGTTCTGACCTCGGACCCATTGTTTTTC
GCTTACCTTAACAACGAAGGAATGCTCGCTTGTACTGTTTTACTCGTCTA
CTGCTGTAGAGGTAGATGTATCGCGTCGTACGAACGTTTTTTTTCAGGCA
ATCGACAGTTCCTGGCCTGTCGCGTCTCACGGCTGTCAAGGACAGCAGTC
CCGTATATGATCTTAACGTGCGCAGCTCGAACCGTCGTCTTTGGGTCGAC
TCCACCCCCTCGATGATAGAAGCGCCGTGTTGGCGAACAGCCTTATCCTG
GCTGTGGTGTTTGGTGTGGTGTCTCGATACCCAGTTTCGTGTTGACGCTT
GACCTTCCCCCCCCCGCGTGCTTTCACTCCAGGATCAATATCCCTCAGGG
TGGGGGTACACACATCACCGTCGACGAATACAAGCTGCTGCTTGACAACG
TCGTCGAGGGTGGAGATTCGAGCCCTGCTCGTCGACTGTTCGACGAGAAC
CGAACGAGTAATCGCTGGGTAGGCCAGAGGGAGAACGAAGTGTCTCCGGC
ATTCCGTGAAGAGACCGCCAGGCTGATCGAGAGAAATAACAGGGGGTTCG
GGTGGAGGGACGGTCCTCCGATCGTGGGGCGGGGCGAGGGCGAGCTGCCG
ATTGACGCCGCTCACATCGGCGGGAAAATTTTCGGAGAGGATGCGTTCAC
GCGGTTTGATGATGAGGAAAGAGGGGAGGTCGAGGACGACATGGCGGAGT
TGTTCGATTTCGACCTCGAGTAGGGAGGTGGGGTGAACGAAGCATTGATA
ATGCTCGGTTCCAAGGCTTCTAATTAATGATAGCTATATGAACATACATG
TACCACACAGAAGAAGTTGCGCAGTGAACCGGCTCGTCGTCGGTCGCTTG
AAAATATTGAAATGGGGAGAGAGGAGCAGATCCTTGTTGGGCCATCGTGA
GGCTTTCTTTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig133:584434..588595+

>mRNA_F-serratus_M_contig133.2467.1 ID=mRNA_F-serratus_M_contig133.2467.1|Name=mRNA_F-serratus_M_contig133.2467.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig133:584434..588595+ (Fucus serratus male)
ATGCTGGCGTCGTCGGGCAAGTCAAGGGACCCCGAGGAAGTAGAGTCCAA
GGAGGGCGAGAGAAGGCCCACATGCTGGCGTCGTCGGGCAAGTCAAGGGA
CCCCGAGGAAGTAGAGTCCAAGGAGGGCGAGAGAAGGCCCACCGCCAGGA
TGATCGACACTCCCATTCCGGACTACTTGATCGATATGCTCAAAGAGGCT
GGAGAGATCGACGAGAACGGCAAGCCGCTCAACGACTTTTTCGACCCGAA
CGACGATGACCAATTCGGCTCGAAGCGTGCGCGGGAGCAAGCCGCCAAAG
AAAAGCGCCAGGATGATCGACACTCCCATTCCGGACTACTTGATCGATAT
GCTCAAAGAGGCTGGAGAGATCGACGAGAACGGCAAGCCGCTCAACGACT
TTTTCGACCCGAACGACGATGACCAATTCGGCTCGAAGCGTGCGCGGGAG
CAAGCCGCCAAAGAAAAGGAGAATGACTACTACGACGTGCCGTTCGGGGA
AATGCTTTATGAGGGCAAAAGGGAAAACAATGAAGACACGGGAACTCTCA
TGGACACCACGATCAACAACGCGGTTATCGAATTCGGGTTTCCGCTTGAA
TTTTTCCTGGATACACTCTGCAGGAGAATGACTACTACGACGTGCCGTTC
GGGGAAATGCTTTATGAGGGCAAAAGGGAAAACAATGAAGACACGGGAAC
TCTCATGGACACCACGATCAACAACGCGGTTATCGAATTCGGGTTTCCGC
TTGAATTTTTCCTGGATACACTCTGCAGGTGGGGTGTTATGCCGCCAATA
AACCCGAACGTTCGGTTAGGGGATCTCATCGACGCGGAGCAAGCAAGCGG
ACTCTGCGAAGCCCTCACGGGTCTCGACGCGGCAGATGTGGGGTGTTATG
CCGCCAATAAACCCGAACGTTCGGTTAGGGGATCTCATCGACGCGGAGCA
AGCAAGCGGACTCTGCGAAGCCCTCACGGGTCTCGACGCGGCAGATGTCA
GAGATAACTACCTCGACGAAACCCTGGAGGACTTGGCATACGATCTTGAT
ATCCCGTTGCCAGACCTTTTCCAAGCTTGCGCGGTTCATAAGTCAGAGAT
AACTACCTCGACGAAACCCTGGAGGACTTGGCATACGATCTTGATATCCC
GTTGCCAGACCTTTTCCAAGCTTGCGCGGTTCATAAGATCAATATCCCTC
AGGGTGGGGGTACACACATCACCGTCGACGAATACAAGCTGCTGCTTGAC
AACGTCGTCGAGGGTGGAGATTCGAGCCCTGCTCGTCGACTGTTCGACGA
GAACCGAACGAGTAATCGCTGGGTAGGCCAGAGGGAGAACGAAGTGTCTC
CGGCATTCCGTGAAGAGACCGCCAGGCTGATCGAGAGAAATAACAGGGGG
TTCGGGTGGAGGGACGGTCCTCCGATCGTGGGGCGGGGCGAGGGCGAGCT
GCCGATTGACGCCGCTCACATCGGCGGGAAAATTTTCGGAGAGGATGCGT
TCACGCGGTTTGATGATGAGGAAAGAGGGGAGGTCGAGGACGACATGGCG
GAGTTGTTCGATTTCGACCTCGAGTAGGATCAATATCCCTCAGGGTGGGG
GTACACACATCACCGTCGACGAATACAAGCTGCTGCTTGACAACGTCGTC
GAGGGTGGAGATTCGAGCCCTGCTCGTCGACTGTTCGACGAGAACCGAAC
GAGTAATCGCTGGGTAGGCCAGAGGGAGAACGAAGTGTCTCCGGCATTCC
GTGAAGAGACCGCCAGGCTGATCGAGAGAAATAACAGGGGGTTCGGGTGG
AGGGACGGTCCTCCGATCGTGGGGCGGGGCGAGGGCGAGCTGCCGATTGA
CGCCGCTCACATCGGCGGGAAAATTTTCGGAGAGGATGCGTTCACGCGGT
TTGATGATGAGGAAAGAGGGGAGGTCGAGGACGACATGGCGGAGTTGTTC
GATTTCGACCTCGAGTAG
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