mRNA_F-serratus_M_contig133.2450.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: D8LM28_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM28_ECTSI) HSP 1 Score: 159 bits (402), Expect = 3.570e-41 Identity = 80/109 (73.39%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 2212 NLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAE------VPS--KDHGKMSQLKD 2514
NLGGYVYPA+ SFKAIES S DD+QWLTYWVVFAAFSILEAF+S+ ++WIPFY+ALKLAFLAWCFLPQTQGAA LYNNFMKDFLA +P+ K G S LKD
Sbjct: 58 NLGGYVYPAYRSFKAIESASTKDDTQWLTYWVVFAAFSILEAFLSVLLHWIPFYFALKLAFLAWCFLPQTQGAALLYNNFMKDFLANNNAANPIPAEGKVEGMASHLKD 166
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: K3WBL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBL2_GLOUD) HSP 1 Score: 126 bits (317), Expect = 2.810e-29 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 2173 LIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSK 2484
L+ FG + NL G++YPAFCSFKAIES S DD QWLTYWVV+A F+I+E F + WIPFYYA KL FL W F+P TQGA+FLYN F+ FL S+
Sbjct: 48 LVGFGAGLI---CNLVGFIYPAFCSFKAIESESKKDDVQWLTYWVVYACFNIIEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYNTFLAPFLKTQESR 148
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: A0A7S1D0I5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0I5_CYCTE) HSP 1 Score: 125 bits (315), Expect = 6.710e-29 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 2143 LMLWGSRIAGLIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSKDHGKMSQLKDKIPSAL 2532
L+L G + L+ F G A N+ G+VYPAF +F+AIES + +D+QWL YWVV+A FSI+EAF+ + WIPF+YA KLAFL W LPQT+GA FLY++F+KDFL + SK ++ K S +
Sbjct: 58 LVLGGLVMFVLLIFFGIGAGSLCNIVGFVYPAFKTFEAIESQNRAEDTQWLIYWVVYAFFSIMEAFIDFLLYWIPFFYAFKLAFLLWAMLPQTKGAKFLYDSFLKDFLKKNESKIDAVLADAKKSADSIV 187
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: B7FT25_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FT25_PHATC) HSP 1 Score: 124 bits (312), Expect = 9.360e-29 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 2128 LYFSTLMLWGSRIAGLIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSKDHGKMSQLK 2511
L F+ L ++G IA L ++L G+VYPAF SF+AIE+ S DD+QWL YWV+FA FSI+E FV + + WIPFY+A KLAFL W LPQT+GA FLY +F+KD L + SK ++ K
Sbjct: 41 LLFAVLTVFGIGIASL-----------TSLVGFVYPAFKSFQAIETKSKGDDTQWLVYWVIFAFFSIIEVFVDVLLYWIPFYFAFKLAFLLWAMLPQTKGAKFLYESFLKDLLKKNESKIDQALANAK 157
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: A0A5D6XJM9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJM9_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.180e-28 Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 2173 LIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSK 2484
L+ FG + NL G+VYPAFCSFKAIE+ DD QWLTYWVV+A F+I+E F + WIPFYYA KL FL W F+P TQGA+FLYN+F+ FL S+
Sbjct: 48 LVGFGAGLI---CNLVGFVYPAFCSFKAIETECKKDDVQWLTYWVVYACFNIIEVFADFLLYWIPFYYAFKLGFLLWLFMPSTQGASFLYNHFLAPFLKSQESR 148
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: A0A6S8SFI4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8SFI4_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.140e-28 Identity = 67/135 (49.63%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 2080 IPFLYEYNNDRFAPVSLYFSTLMLWGSRIAGLIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSK 2484
IP L + + P L+L G I ++ F G A + G+VYPAF SF++IES DD+QWL YWVV+A FSI+E FV + WIPFYYA KLAFL W LPQT+GA FLY++F+KDFL + SK
Sbjct: 18 IPILQKAEDATKVPKEF----LVLGGGIIFFVLIFFGIGAGTLCGIVGFVYPAFKSFESIESKIRGDDTQWLIYWVVYAFFSIIEVFVDFLLYWIPFYYAFKLAFLLWAMLPQTKGAKFLYDSFLKDFLKKNESK 148
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: A0A024GBB1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GBB1_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.470e-27 Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 2158 SRIAGLIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSK 2484
S IA L G A NL G+VYP +CSF+A+ES S DD QWLTYWV++A F++LE F + WIPFYYA KL FL W F+P TQGA+FLYN+F+ LA SK
Sbjct: 40 SAIAALFLLIGFGAGFICNLIGFVYPTYCSFRAVESPSKGDDVQWLTYWVIYACFAVLEVFGEFLLIWIPFYYAFKLGFLLWLFMPSTQGASFLYNHFLSPLLACKDSK 148
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: A0A7S0ASR9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASR9_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.690e-27 Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 2143 LMLWGSRIAGLIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSK 2484
+ L G + I F G A N+ G+VYPAF SF+AIE+ + DD+QWL YWVV+A FSI+E FV + WIPFYY K AFL WC PQT+GA FLY++F+KDFL + S+
Sbjct: 35 IALGGGALVLFILFFGVGAGALCNIVGFVYPAFKSFEAIETQARGDDTQWLIYWVVYAFFSIIEVFVDFLLYWIPFYYPFKAAFLIWCMAPQTRGAKFLYDSFLKDFLKQNESR 148
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: B8C2Y0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2Y0_THAPS) HSP 1 Score: 117 bits (293), Expect = 2.020e-27 Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 2221 GYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSK 2484
G++YPAF SFKAIE+ + +D +QWL YWVV++ FSI+E FV + WIPFYYA K+AFL W LPQT+GA FLY+NF+KDFL SK
Sbjct: 3 GFLYPAFQSFKAIENRANSDVTQWLIYWVVYSFFSIIEVFVDYLLYWIPFYYAFKMAFLLWAMLPQTRGAKFLYDNFLKDFLKTNESK 90
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Match: A0A067D0U5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D0U5_SAPPC) HSP 1 Score: 121 bits (303), Expect = 2.850e-27 Identity = 58/120 (48.33%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 2173 LIDFGGDVAFDSSNLGGYVYPAFCSFKAIESISPTDDSQWLTYWVVFAAFSILEAFVSIFINWIPFYYALKLAFLAWCFLPQTQGAAFLYNNFMKDFLAEVPSKDHGKMSQLKDKIPSAL 2532
L+ FG + NL G+VYPA+ SFKAIES S DD QWLTYWVV+ F I+E FV + W+PFYYA KL FL W FLP TQGA F++N+F++ FL + + +K S +
Sbjct: 65 LVGFGAGLL---CNLVGFVYPAYASFKAIESDSKNDDVQWLTYWVVYCCFEIVEVFVDYLLFWVPFYYAFKLGFLVWLFLPSTQGATFIFNHFLQPFLKSHEANIDAAIDNIKSNSGSVI 181 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig133.2450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig133.2450.1 >prot_F-serratus_M_contig133.2450.1 ID=prot_F-serratus_M_contig133.2450.1|Name=mRNA_F-serratus_M_contig133.2450.1|organism=Fucus serratus male|type=polypeptide|length=196bp MSSVQYRQYGSFCSTSTAVTIYVVAAGAGWQGCWPSPFRPCIPFLYEYNNback to top mRNA from alignment at F-serratus_M_contig133:323288..328695- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig133.2450.1 ID=mRNA_F-serratus_M_contig133.2450.1|Name=mRNA_F-serratus_M_contig133.2450.1|organism=Fucus serratus male|type=mRNA|length=5408bp|location=Sequence derived from alignment at F-serratus_M_contig133:323288..328695- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig133:323288..328695- >mRNA_F-serratus_M_contig133.2450.1 ID=mRNA_F-serratus_M_contig133.2450.1|Name=mRNA_F-serratus_M_contig133.2450.1|organism=Fucus serratus male|type=CDS|length=1176bp|location=Sequence derived from alignment at F-serratus_M_contig133:323288..328695- (Fucus serratus male)back to top |