mRNA_F-serratus_M_contig1326.2421.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A6H5L426_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L426_9PHAE) HSP 1 Score: 382 bits (982), Expect = 2.370e-127 Identity = 212/305 (69.51%), Postives = 242/305 (79.34%), Query Frame = 2
Query: 47 RGLVLLSVASAARTGSSFFLAAGLAATFSSSGRANKIR-----TCGTM------ATAAKPAKRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRKL-LRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLD-LDVAKDR 922
RGL L+ V +A R S FFLAAGLA T +S +N + +C ++ A A A+RVLVTGAGGRTGGIVFEKLL KEGYA KGMVR+EKSA+ LKKK VEVLD NI AD+ P L A+EG+EA+VLCTSAVPKIYPFSIAKV+ +K+ LR EDPGRPKFY+ E GTPEEVDW GAKALIDAAKAAGVK FVYVGSMGGTQPDNFLNTIGKQEDGTGGDIL+WKRKAEEYLIASG+TYTIIHPGGL+D+EGGKR+LVL DD +L+RK RSIPRADVAQ +D + ++DR
Sbjct: 6 RGLALVGVVNAVRVSSGFFLAAGLATTVASQTGSNHVSNHRTGSCSSVIMSAEEAGAPSTARRVLVTGAGGRTGGIVFEKLLAKEGYATKGMVRTEKSANNLKKKCKVEVLDSNIAIADLATPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMILRSEDPGRPKFYWCENGTPEEVDWLGAKALIDAAKAAGVKHFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILLWKRKAEEYLIASGMTYTIIHPGGLLDKEGGKRQLVLDTDDKMLERKSRSIPRADVAQAVATGIDGVKTSRDR 310
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A7S3JVE2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVE2_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.290e-95 Identity = 173/290 (59.66%), Postives = 210/290 (72.41%), Query Frame = 2
Query: 200 RVLVTGAGGRTGGIVFEKLLKK-EGYAVKGMVRSEKSASKLKKKSGVEVLDEN-IVTADVT-DPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRKLLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADLTL-----NTDYA-KAPQPAAM 1042
+V+VTGAGGRTG +VFE+L E G+VRS KS + L KK LDE I+TADVT SL AM G +AI+LCTSAVPKI P+SI KV+ +KLLR ED GRP+F F E GTPEEVDW GAKA I+AAKAAGVK FV+V SMGGTQPDNFLNTIGK DGTGGDIL+WKRKAE++L+ SGL YTIIHPGGLIDEE KR +V+G+DD LL+ K RSIPRADVA++ L + AK++SFD+ T P GEG+ T + L L + DY+ + P+P ++
Sbjct: 18 KVMVTGAGGRTGKLVFEQLSNDYEDVEPLGLVRSAKSKNALLKKMKDSDLDETKIITADVTAKDKSLEAAMSGCDAIILCTSAVPKIKPWSIVKVMFKKLLRKEDVGRPEFSFPENGTPEEVDWLGAKAQIEAAKAAGVKHFVFVSSMGGTQPDNFLNTIGKVSDGTGGDILLWKRKAEKFLVESGLDYTIIHPGGLIDEEPAKREIVVGLDDVLLKLKSRSIPRADVARVCCAALFDERAKNKSFDIATKPIGEGKPTVHAKDVFGILVLQHPEQSADYSIELPEPPSI 307
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A7S3XVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVK4_HETAK) HSP 1 Score: 300 bits (768), Expect = 1.880e-95 Identity = 166/279 (59.50%), Postives = 203/279 (72.76%), Query Frame = 2
Query: 194 AKRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDEN-IVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRK----LLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADLTLNTDY 1015
A +VLVTGAGG+TGG+VF+ LL+KEG+ GMVR KSA+KLKK G + IV D++DPASL AM+G +A+V+ TSAVPKI P SIAKVL K LL PGRP+F + G PE VDW G K ID AK +KQ V V SMGG+Q DNFLNTIGK+EDGTGGDIL+WKRKAE+YLI SG+ YTIIHPGGLID++GGKR +V+ +DD LL+R+ RSIPRADVA++ V+ L A +RS D+CT+ EGEG VTT+F AL N +Y
Sbjct: 2 ATKVLVTGAGGKTGGLVFKNLLEKEGFEAVGMVRGGKSANKLKKVVGGSISGNGKIVFGDISDPASLETAMQGCDALVIATSAVPKILPLSIAKVLFAKAFGKLLNLP-PGRPEFKWEPNGQPELVDWIGQKNQIDLAKKLKLKQVVVVSSMGGSQADNFLNTIGKKEDGTGGDILLWKRKAEKYLIDSGVKYTIIHPGGLIDKDGGKREIVMDIDDKLLKREKRSIPRADVAEVCVQSLLCKSAINRSIDICTNEEGEGAVTTNFDALFKGTKGNCNY 279
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A4D9D9A5_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A5_9STRA) HSP 1 Score: 300 bits (767), Expect = 1.060e-94 Identity = 162/281 (57.65%), Postives = 207/281 (73.67%), Query Frame = 2
Query: 197 KRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRKLLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLI----ASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADLTLNTDYAKAP 1027
++VLVTGAGGRTG +VF+KL K + G+VRS+KSASKL+K +G DE IV DV DPA+L+KA+EG ++++LCTSA PKI FSI K+L +KLLR PGRP+F F +G PEEVDW GAK +DAA AAGVK FV++GSMGGTQPDNFLN+IGK+ DG+GGDIL+WKRKAE+YLI + G++YTI+HPGGL+D+ GG++ LV VDD LLQR RSIPR DVA++ V+ L AK+ + DV + G G TTDF AL L + ++P
Sbjct: 51 RKVLVTGAGGRTGTLVFQKLQAKTDFQPIGLVRSKKSASKLRKAAGAT--DEQIVIGDVMDPATLSKALEGCDSLILCTSATPKILLFSIIKILFKKLLR-RAPGRPEFKFPPRGEPEEVDWLGAKNQVDAAIAAGVKHFVFLGSMGGTQPDNFLNSIGKRPDGSGGDILLWKRKAEKYLIQQANSHGMSYTIVHPGGLLDKPGGQQELVFDVDDVLLQRTTRSIPREDVAEVCVQALLQPKAKNVALDVIAEAVGTGTPTTDFSALFDSLQNRSCAYESP 328
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A835YZL1_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL1_9STRA) HSP 1 Score: 289 bits (739), Expect = 3.970e-91 Identity = 157/284 (55.28%), Postives = 201/284 (70.77%), Query Frame = 2
Query: 194 AKRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDE-NIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLV---RKLLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRK-MRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADLTLNTDYAKAPQ 1030
A +V+VTGAGG+TG +VF+KLL++ GY G+VR+EKSA KL+K G ++ I +V D A+L M G +A+VLC+SA PKI S+ VL+ RKLLR P RP F FG G PE+VDW GAK +D+AK A VK+FV+V SMGGTQPDNFLNTIG+++DGTGGDIL+WKRKAEEYLI SG+ YTI+HPGGL+D+ GGKR L+LG DD L + RS+PR DVA++ V+ L LD A +RS D+ + EGEG VTTDF L + +Y P+
Sbjct: 2 ASKVVVTGAGGKTGSLVFKKLLERPGYEPVGLVRTEKSAKKLRKFLGADLAPSAQIALGNVNDAAALDGVMAGADAVVLCSSATPKIRLLSLLLVLLNPLRKLLRLA-PARPSFTFGGGGIPEKVDWLGAKEQVDSAKRACVKKFVFVSSMGGTQPDNFLNTIGRKKDGTGGDILLWKRKAEEYLIESGVPYTILHPGGLLDQPGGKRELLLGKDDAFLATQDTRSVPREDVAEVCVQALSLDEATNRSLDLVSRKEGEGAVTTDFAELFRSVEGTCNYTAMPR 284
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: D8LIZ7_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ7_ECTSI) HSP 1 Score: 291 bits (745), Expect = 4.260e-91 Identity = 163/237 (68.78%), Postives = 184/237 (77.64%), Query Frame = 2
Query: 47 RGLVLLSVASAARTGSSFFLAAGLAATFSSSGRANKIRTCGTMAT------------AAKPAKRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRKL-LRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKR 718
RGL L+ V +A R S FFLAAGLA T +S +N + T+++ A A+RVLVTGAGGRTGGIVFEKLL KEGYA KGMVR+EKSA+ LKKK EVLD NI AD+T P L A+EG+EA+VLCTSAVPKIYPFSIAKV+ +K+ LR EDPGRPKFY+ E GTPEEVDW GAKALIDAAK+AGVK FVYVGSMGGTQPDNFLNTIGKQEDGTGGDIL+WKR
Sbjct: 6 RGLALVGVVNAMRVSSGFFLAAGLATTGASQTGSNHVSNHRTISSGSSVIMSAEEAGAPSTARRVLVTGAGGRTGGIVFEKLLDKEGYATKGMVRTEKSANNLKKKCKTEVLDSNIAIADLTTPGLLAAALEGMEAVVLCTSAVPKIYPFSIAKVMFKKMILRSEDPGRPKFYWCENGTPEEVDWLGAKALIDAAKSAGVKHFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILLWKR 242
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: R1FLD3_EMIHU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLD3_EMIHU) HSP 1 Score: 288 bits (738), Expect = 7.540e-91 Identity = 159/271 (58.67%), Postives = 193/271 (71.22%), Query Frame = 2
Query: 194 AKRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRKLLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQ---EDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADL 997
A +VLVTGAGGRTG +VF++L + +A G+VRS+K+ L+K G + D IV ADVTD A+L AM G +++VLCTSAVP+I PFSIAK PGRPKF F GTPEEVDW GAK IDAAKAAGVK+FV+V SMGGTQPDNFLN+IG++ EDG+GGDIL+WKRKAE YLI+SGL YTIIHPGGL+D+ G R L +GVDD LL + R +PRADVA++ L A D S D+ + PEGEG VT G+L A L
Sbjct: 15 ALKVLVTGAGGRTGKLVFQQLKESASFAPVGLVRSKKAVKALRKVGGAD--DAEIVRADVTDGAALAAAMAGCDSVVLCTSAVPQILPFSIAK-----------PGRPKFKFAPGGTPEEVDWLGAKLQIDAAKAAGVKRFVFVSSMGGTQPDNFLNSIGERKSDEDGSGGDILLWKRKAERYLISSGLEYTIIHPGGLVDKPAGARELTVGVDDELLGQAFRQVPRADVARVCCAALTEPAAADLSLDLASRPEGEGAVTDSPGSLFASL 272
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A7S0ESZ0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ESZ0_9EUKA) HSP 1 Score: 278 bits (712), Expect = 5.380e-87 Identity = 153/266 (57.52%), Postives = 187/266 (70.30%), Query Frame = 2
Query: 194 AKRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRK-LLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALL 988
A +VLVTGAGGRTG +VFE+L + + G+VRS K+A L+K + IV DVTD L AM G +++VLCTSAVP+I P SI K+L +K +LR +PGRP+F F GTPEEVDW GAK IDAAKAAGVK+FV+V SMGGTQPDNFLN+IGK+ DG GGDIL+WKRKAE YL+ASGL Y+IIHPGGL+D G R L +GV D LLQ + R +PRADVA++ L A SFD+ + PEGEGE T +L
Sbjct: 26 ALKVLVTGAGGRTGRLVFEQLQQDASMSPVGLVRSRKAAKALRKAGAA---GDEIVKGDVTDATVLAGAMAGCDSVVLCTSAVPQIKPLSIVKLLFKKTVLRRAEPGRPQFRFTPGGTPEEVDWLGAKMQIDAAKAAGVKRFVFVSSMGGTQPDNFLNSIGKRADGAGGDILLWKRKAERYLVASGLEYSIIHPGGLVDGPGAARELRVGVGDALLQEEFRQVPRADVARVCCAALIAPEAAKVSFDLASRPEGEGEPTAAAASLF 288
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: A0A0M0K127_9EUKA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K127_9EUKA) HSP 1 Score: 278 bits (711), Expect = 1.120e-86 Identity = 156/284 (54.93%), Postives = 198/284 (69.72%), Query Frame = 2
Query: 200 RVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRK-LLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADLT-LNTDYAKA-PQPAAM 1042
RVLVTGAGGRTG +VFE+L K + G+VRS K+ LKK G E L +V AD T +T AME +A+VLCTSAVPKI P SIAK+L +K +LR +DPGRP+F F GTP+EVDW GAK IDAAKAAGVK+FV++ SMGGTQP+NFLN+IGKQ DG+GGDIL+WKRKAE YL+ SGL YTIIHPGGL+D +R L++GV+D LL+ R +PRADVA+++ L A S D+ + P G+G T + + A L + DY+ P P ++
Sbjct: 18 RVLVTGAGGRTGQLVFEQLQKDKSVQAVGLVRSRKAVKALKK-VGAEPLQ--VVRADTTVLNEVTAAMENCDAVVLCTSAVPKIKPLSIAKLLFKKAILRSKDPGRPQFRFESDGTPQEVDWLGAKLQIDAAKAAGVKKFVFISSMGGTQPENFLNSIGKQADGSGGDILLWKRKAERYLVESGLDYTIIHPGGLVDAPACERELLVGVNDELLKLSTRQVPRADVARVACAALTAPKAAKVSMDLASKPPGDGVPTANAADVFAALRGKSCDYSDVKPDPPSL 298
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Match: F0Y6P5_AURAN (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P5_AURAN) HSP 1 Score: 272 bits (695), Expect = 1.050e-84 Identity = 148/267 (55.43%), Postives = 185/267 (69.29%), Query Frame = 2
Query: 197 KRVLVTGAGGRTGGIVFEKLLKKEGYAVKGMVRSEKSASKLKKKSGVEVLDENIVTADVTDPASLTKAMEGVEAIVLCTSAVPKIYPFSIAKVLVRKLLRFEDPGRPKFYFGEKGTPEEVDWEGAKALIDAAKAAGVKQFVYVGSMGGTQPDNFLNTIGKQEDGTGGDILVWKRKAEEYLIASGLTYTIIHPGGLIDEEGGKRRLVLGVDDTLLQRKMRSIPRADVAQLSVECLDLDVAKDRSFDVCTDPEGEGEVTTDFGALLADL 997
K+VLVTGAGGRTG +VF+KL K+ YA + +SA + +V ADV D A+L +AM G +A+VLCTSAVP I S+ K++V+KLLR D GRP+F F GTPEEVDW GA+ IDAAKAAGV FV+V SMGGTQP+NFLNTIGKQ+DG+GGDIL+WKRKAE YL+ SG+ +TI+HPGGL+DEE GKR L + VDD LL K RS+ RADVA++ L D A +SFD+ + P GEG T ++ L
Sbjct: 5 KKVLVTGAGGRTGKLVFKKL--KDDYADVAPLGLARSAKXXXXXXXXXXXXDEVVAADVADEAALAEAMAGCDAVVLCTSAVPAIRKRSLVKLMVKKLLRRPDVGRPEFSFPPGGTPEEVDWLGARKQIDAAKAAGVSHFVFVSSMGGTQPENFLNTIGKQDDGSGGDILLWKRKAERYLVDSGVPFTIVHPGGLVDEEPGKRELTVEVDDVLLGLKSRSVARADVARVCCAALFDDAALGKSFDLASKPVGEGTPTLHAASVFEAL 269 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1326.2421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1326.2421.1 >prot_F-serratus_M_contig1326.2421.1 ID=prot_F-serratus_M_contig1326.2421.1|Name=mRNA_F-serratus_M_contig1326.2421.1|organism=Fucus serratus male|type=polypeptide|length=337bp MLAPRGLVLLSVASAARTGSSFFLAAGLAATFSSSGRANKIRTCGTMATAback to top mRNA from alignment at F-serratus_M_contig1326:102677..109156+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1326.2421.1 ID=mRNA_F-serratus_M_contig1326.2421.1|Name=mRNA_F-serratus_M_contig1326.2421.1|organism=Fucus serratus male|type=mRNA|length=6480bp|location=Sequence derived from alignment at F-serratus_M_contig1326:102677..109156+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1326:102677..109156+ >mRNA_F-serratus_M_contig1326.2421.1 ID=mRNA_F-serratus_M_contig1326.2421.1|Name=mRNA_F-serratus_M_contig1326.2421.1|organism=Fucus serratus male|type=CDS|length=2022bp|location=Sequence derived from alignment at F-serratus_M_contig1326:102677..109156+ (Fucus serratus male)back to top |