mRNA_F-serratus_M_contig1321.2412.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A836CCQ8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA) HSP 1 Score: 243 bits (620), Expect = 7.290e-74 Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = 1
Query: 1 RTAPWYNRIKAPIRGVNIGGLFVLERWILPAFTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
+ APWY+ +KAPIR VNIGGLFVLERWILPAF WG+ TGI DQHSFS KCGDLG C+++K HWKN+Y A DF +MK GLN++RLPVGWWYFA + ++ PYI+PDEDLY HPIT V+ WA DAGLQVILDLHGAPG QNGLDNS
Sbjct: 173 KRAPWYDTLKAPIRAVNIGGLFVLERWILPAFVDWGEPTGIIDQHSFSVKCGDLGICEDIKAHWKNFYTAQDFHDMKSMGLNSIRLPVGWWYFAKYANINSAPYIIPDEDLYSLDHPITRVLKWAHDAGLQVILDLHGAPGGQNGLDNS 321
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A4D9D2R7_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.560e-72 Identity = 101/149 (67.79%), Postives = 124/149 (83.22%), Query Frame = 1
Query: 1 RTAPWYNRIKAPIRGVNIGGLFVLERWILPAFTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
RT PWYN+IK PIR VNIGGLFVLE+WILP F WG+ETGI DQ++FS++C + CD LK HW+ WY A+DF +MK+ GLNT+RLPVG+WYFA + ++P PY++PD+DL+D HHPIT+VI WA +AGLQVILDLHGAP SQNGLDNS
Sbjct: 111 RTVPWYNKIKNPIRAVNIGGLFVLEQWILPGFVTWGEETGIWDQYTFSSECKKMDICDQLKQHWETWYSADDFLQMKKFGLNTIRLPVGYWYFAERVGLNPAPYLVPDQDLFDAHHPITNVIRWADEAGLQVILDLHGAPYSQNGLDNS 259
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A7S2XF99_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF99_9EUKA) HSP 1 Score: 172 bits (436), Expect = 4.610e-48 Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 1 RTAPWYNRI-KAPIRGVNIGGLFVLERWILPAFTKWGDETGITDQHSFSA-KCGDLGTCDN-LKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLY-DRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
R PW +R+ P+RGVN+GGLFVLE WI P F WGDE I DQ+++ + L T N LKDHW ++Y +DFK M + G+NT R+PVGWWYFA + + P YI PD D+ D HPIT VI WA +Q+ILDLHGAPGSQNGLDNS
Sbjct: 148 RRTPWASRLGHKPLRGVNLGGLFVLEPWICPGFADWGDE--IRDQYTYCKNESVSLSTKTNKLKDHWASFYSEDDFKLMSKYGINTARMPVGWWYFAEATGLDPLHYITPDNDIMVDMDHPITKVISWAYKHNIQIILDLHGAPGSQNGLDNS 298
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A6T6YDK2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6YDK2_9EUKA) HSP 1 Score: 160 bits (406), Expect = 2.890e-43 Identity = 80/153 (52.29%), Postives = 98/153 (64.05%), Query Frame = 1
Query: 1 RTAPWYNRI-KAPIRGVNIGGLFVLERWILPAFTKWGDETGITDQHSF--SAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLY-DRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
R PW + PIRGVN+G LFVLE WI P FT+WGD+ I DQ+++ S D L+ HW +Y DFK M GLN R+PVGWWYF + + P+PY +P D+ D HPIT VI +A+ G+QVILDLHGAPGSQNGLDNS
Sbjct: 220 RFTPWAKLLGNKPIRGVNVGSLFVLEPWIAPGFTEWGDD--IRDQYTYCVSGNQTDDEKIKALEHHWATFYTEEDFKLMSEYGLNVARIPVGWWYFGEAAGLDPKPYFVPKNDIQTDLDHPITKVIRYAQKYGIQVILDLHGAPGSQNGLDNS 370
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A8H3I9Z6_9LECA (Exo-1,3-beta-glucanase n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3I9Z6_9LECA) HSP 1 Score: 138 bits (347), Expect = 3.260e-36 Identity = 66/145 (45.52%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 16 YNRIKAPIRGVNIGGLFVLERWILPA-FTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
Y+ +K +RGVN+GG FVLE WI P+ F++W D T + D++++SA G L DHW W +DF + AGLN VR+P+G+W AP + PY+ + D+ IGWA+ AGL+V++DLHGAPGSQNG DNS
Sbjct: 39 YDNVK--VRGVNLGGWFVLEPWIKPSLFSEWADSTTVVDEYTYSAALGKDEALSRLSDHWNTWITQDDFNAIAAAGLNHVRIPIGYWAVAP---IDGDPYVQGQLPILDQ------AIGWARSAGLKVMIDLHGAPGSQNGFDNS 172
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A2T3AR05_AMORE (Glycoside hydrolase family 5 protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3AR05_AMORE) HSP 1 Score: 132 bits (333), Expect = 3.580e-34 Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 37 IRGVNIGGLFVLERWILPA-FTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITD-VIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
+RGVN+GG FVLE WI P+ F W + G+ D+++F+ G + L+ HW NW +DF E+ GLN VR+P+G+W A++P LP + PI D IGWA+ AGL+V++DLHGAPGSQNG DNS
Sbjct: 31 VRGVNLGGWFVLEPWITPSLFAPWANGGGVVDEYTFTQALGPTAAQNQLEAHWNNWITQDDFNEIASMGLNHVRIPIGYW------AINP----LPGDPYVQGQLPILDNAIGWARSAGLKVMIDLHGAPGSQNGFDNS 159
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: UPI001D05379E (uncharacterized protein n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D05379E) HSP 1 Score: 131 bits (329), Expect = 1.170e-33 Identity = 66/144 (45.83%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 16 YNRIKAPIRGVNIGGLFVLERWILPAFTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
YN K +RGVN+GG FVLE WI P+ GD+ + D+++FSAK G L DHW W DF + AGLN VR+P+G+W AP ++ PY+ ++ D+ I WA+ AGL+V++DLHGAPGSQNG DNS
Sbjct: 40 YNNNK--VRGVNLGGWFVLEPWITPSLFNLGDD--VVDEYTFSAKLGKDQAYSKLSDHWNTWITQADFNAIASAGLNHVRIPIGYWAVAP---INGDPYVQGQLNVLDQ------AINWARGAGLKVLIDLHGAPGSQNGFDNS 170
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A5M8Q0R0_9LECA (Glucan 1 n=1 Tax=Lasallia pustulata TaxID=136370 RepID=A0A5M8Q0R0_9LECA) HSP 1 Score: 128 bits (321), Expect = 5.830e-33 Identity = 63/145 (43.45%), Postives = 87/145 (60.00%), Query Frame = 1
Query: 16 YNRIKAPIRGVNIGGLFVLERWILPA-FTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
YN K + GVN+GG FVLE WI P+ F+ W + + D+++++A G L +HW W +DF ++ AGLN VR+PVG+W AP PY+ + D + IGWA+ AGL+V++DLHGAPGSQNG DNS
Sbjct: 40 YNNDK--VLGVNLGGWFVLEPWITPSIFSDWAESETVVDEYTYTATLGKDEATSRLTNHWNTWITQDDFNQIAAAGLNHVRIPVGYWAVAPLDG---DPYVQGQLPILD------NAIGWARSAGLKVMIDLHGAPGSQNGFDNS 173
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A1L7WRL8_9HELO (Probable Glucan 1,3-beta-glucosidase n=1 Tax=Phialocephala subalpina TaxID=576137 RepID=A0A1L7WRL8_9HELO) HSP 1 Score: 129 bits (323), Expect = 1.620e-32 Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 16 YNRIKAPIRGVNIGGLFVLERWILPA-FTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
YN K +RGVN+GG FVLE WI P+ F++W + G+ D+++++ G + L HW W DF+E+ GLN VR+P+G+W AV+PQP D + + + IGWA+ AGL+V+LDLHGAPGSQNG DNS
Sbjct: 60 YNGSK--VRGVNLGGWFVLEPWITPSIFSQWANGGGVVDEYTYTQALGPTEAFNRLNQHWATWITQADFQEIASFGLNHVRIPIGYW------AVNPQPG---DPYVQGQLTYLDQAIGWARSAGLKVMLDLHGAPGSQNGFDNS 193
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Match: A0A425BU95_9PEZI (Cellulase domain-containing protein n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BU95_9PEZI) HSP 1 Score: 127 bits (320), Expect = 2.180e-32 Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 16 YNRIKAPIRGVNIGGLFVLERWILPA-FTKWGDETGITDQHSFSAKCGDLGTCDNLKDHWKNWYDANDFKEMKRAGLNTVRLPVGWWYFAPKSAVSPQPYILPDEDLYDRHHPITDVIGWAKDAGLQVILDLHGAPGSQNGLDNS 447
YN K +RGVN+GG FVLE WI P+ F W + G+ D+++F G L HW W DFKE++ GLN VR+P+G+W P PY+ + D + IGWA+ AGL+V+LD+HG PGSQNG DNS
Sbjct: 12 YNNDK--VRGVNLGGWFVLEPWITPSIFEPWANGGGVVDEYTFCQAVGKSAAQSQLTQHWNTWITEADFKEIESVGLNHVRIPIGYWALNPLDG---DPYVQGQLPILD------NAIGWARSAGLKVMLDIHGVPGSQNGFDNS 145 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1321.2412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1321.2412.1 >prot_F-serratus_M_contig1321.2412.1 ID=prot_F-serratus_M_contig1321.2412.1|Name=mRNA_F-serratus_M_contig1321.2412.1|organism=Fucus serratus male|type=polypeptide|length=149bp RTAPWYNRIKAPIRGVNIGGLFVLERWILPAFTKWGDETGITDQHSFSAKback to top mRNA from alignment at F-serratus_M_contig1321:248678..253709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1321.2412.1 ID=mRNA_F-serratus_M_contig1321.2412.1|Name=mRNA_F-serratus_M_contig1321.2412.1|organism=Fucus serratus male|type=mRNA|length=5032bp|location=Sequence derived from alignment at F-serratus_M_contig1321:248678..253709- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1321:248678..253709- >mRNA_F-serratus_M_contig1321.2412.1 ID=mRNA_F-serratus_M_contig1321.2412.1|Name=mRNA_F-serratus_M_contig1321.2412.1|organism=Fucus serratus male|type=CDS|length=894bp|location=Sequence derived from alignment at F-serratus_M_contig1321:248678..253709- (Fucus serratus male)back to top |