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Homology
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: D8LEX4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX4_ECTSI) HSP 1 Score: 675 bits (1742), Expect = 1.970e-233 Identity = 335/404 (82.92%), Postives = 360/404 (89.11%), Query Frame = 1
Query: 130 PIASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSASASTKKA 1341
P A+T YMI+PE+ KP ++TS WPLLLRNYDDL CR AHYTP+PSGCSPL RELKEYIRYGVINLDKPANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGL RFHSAV G+ EAR KVE+AV LTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFW SC+AGTYVRTLCVHLGLIVG GGHMQELRRVRSG LSE+GNLVTMHDVLDAQHVYD KKDESYLRR+IMPLEVLLLTYKRVVVKDSA+NA+CYGAKL IPGLLRFA IEINTEV+M+TTKGEA+AVGIA+M S +A DHG VA IKRVIMERDTYP+RWG+G +A +KK MVK GLL KHGREN TPK+WK Y DL+ A K A
Sbjct: 30 PQAATEYMIRPETTKPALNTSQWPLLLRNYDDLECRAAHYTPLPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDGSAVEARMKVEKAVGLLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWVSCQAGTYVRTLCVHLGLIVGTGGHMQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEVLLLTYKRVVVKDSAVNAVCYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGTVATIKRVIMERDTYPRRWGLGHVATKKKAMVKSGLLDKHGRENASTPKDWKTSYHDLTPKAMKKDA 433
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A7S4VRT4_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VRT4_9STRA) HSP 1 Score: 613 bits (1582), Expect = 1.400e-209 Identity = 300/400 (75.00%), Postives = 346/400 (86.50%), Query Frame = 1
Query: 124 ASPIASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSAS 1323
ASP S +MI+P S+ PK+DTS WPLLL+NYD L RT+HYTPIP+G SPL R LK++I YGVINLDKPANPSSHEVV+WIKRILR EKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVG+VR HSA+ + + + RAV TLTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD+ R+LGIFW SCEAGTY+RT+CVHLGL+VG GGHMQELRR RSG + E+ N+VTMHDV+DAQHVYD KDE YLRRV+MPLEVLL YKR+VVKDSA+NAICYGAKL IPGLLRFA I+INTEV++MTTKGEA+A+ IA+MT+ +A DHGVVA IKRVIMERDTYP+RWG+GP+AQRKK M+KEG L KHG+ NDKTPK++ + YKD+ +S
Sbjct: 25 ASPNTSAGHMIEPSSSTPKLDTSKWPLLLKNYDQLHVRTSHYTPIPTGSSPLARPLKDHISYGVINLDKPANPSSHEVVSWIKRILRAEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGVVRLHSAI-----DDTKVLNRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDDKRNLGIFWVSCEAGTYIRTMCVHLGLLVGTGGHMQELRRARSGIMREEDNMVTMHDVMDAQHVYDTTKDEKYLRRVVMPLEVLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDINTEVVLMTTKGEAIAMAIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKSMIKEGKLDKHGKPNDKTPKDFLEGYKDIKSS 419
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A835YVX3_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVX3_9STRA) HSP 1 Score: 614 bits (1583), Expect = 1.690e-209 Identity = 302/399 (75.69%), Postives = 340/399 (85.21%), Query Frame = 1
Query: 130 PIASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSASA 1326
P+A IKP+ + PK+DTS WPLLL+NYD L RT HYTPIPSGCSPL RELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYV +VR H+A+ E++ K+ RA+ TLTGALFQRPPLISAVKRQLRIRTIY SKL+EYD RHLGIFW SCEAGTY+RTLCVHLG + GVGGHMQELRRVRSG L E+ +LVTMHDVLDAQHVYD KDE+YLRR +MPLEVLL ++KR+VVKDSA+NAICYGAKL +PGLLRFA GIE+ EV+M++TKGEA+AVG+A MT+ +A DHGVVA IKRVIMERDTYP+RWG+GP+AQRKK +VKEG L KHGR + TP EWK Y D + A
Sbjct: 33 PLAGAGEFIKPQDSVPKLDTSKWPLLLKNYDQLHVRTGHYTPIPSGCSPLKRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVAIVRLHAAL-----ESQAKLARAIETLTGALFQRPPLISAVKRQLRIRTIYASKLVEYDAARHLGIFWVSCEAGTYIRTLCVHLGHLTGVGGHMQELRRVRSGVLDENAHLVTMHDVLDAQHVYDTHKDETYLRRAVMPLEVLLRSFKRLVVKDSAVNAICYGAKLMLPGLLRFADGIEVGEEVVMISTKGEAIAVGVALMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPVAQRKKGLVKEGKLDKHGRATEATPAEWKAGYTDYADGA 426
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A7S2KWJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KWJ2_9STRA) HSP 1 Score: 609 bits (1570), Expect = 1.720e-208 Identity = 298/397 (75.06%), Postives = 343/397 (86.40%), Query Frame = 1
Query: 136 ASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSASA 1326
+ST MI P + PK+DTS WPLLL+NY DL RT+HYTPIP G SPL R+LK++I GVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEY+G+VR HSA+ E + + RAV TLTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD R+LGIFW SCEAGTY+RT+CVHLGL+VG GGHMQELRRVRSG ++E NLVTMHDV+DAQHVYD KDE YLRRV+MPLEVLL YKR+VVKDSA+NAICYGAKL +PGLLRFA I+INTEV++MTTKGEA+AVGIA+MT+ +A DHGVVA IKRVIMERDTYP+RWG+GP+AQRKK ++KEG L KHG+ NDKTPK++ +EYK + ++
Sbjct: 24 SSTSTMIAPSNHTPKLDTSKWPLLLKNYSDLHIRTSHYTPIPCGSSPLARKLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYIGVVRLHSAI-----EDTKALHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYIRTMCVHLGLLVGTGGHMQELRRVRSGVMAEKDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLEVLLTNYKRIVVKDSAVNAICYGAKLMVPGLLRFADDIDINTEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNDKTPKDFLEEYKSVEGAS 415
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A7S2V3R2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3R2_9STRA) HSP 1 Score: 605 bits (1560), Expect = 3.730e-207 Identity = 302/425 (71.06%), Postives = 357/425 (84.00%), Query Frame = 1
Query: 46 KTTMSDIRKKKKSKSSKKSHPVSTDGASPIASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSA 1320
KT S+ + KKK K S S+DGA P+A+T YMI+PE +KPK+DTS WPLLL++YD L RTAHYTPIP GCSPL R ++EYIRYGV+N+DKP+NPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVK+QQSAGKEYVG+VR H+A+ + + RA+ TLTGALFQRPPLISAVKRQLRIRTIY +KL++YD+DRHLG+FW SC+AGTYVRTLCVHLGL+ G GGHMQELRRVRSG LSE+ +LVTMHDVLDAQ+ YD KDE+YLRRV+ PLE+LL +KR+VVKDSA+NAICYGA L IPGLLRFA I++N EV+M+TTKGEA+AVGIA+MT+ +A DHG+VA IKRV+MERDTYP+RWG+GP+A RKK M+K G L KHG+ N TP E+ Q YKDL +
Sbjct: 3 KTPKSEKKLKKKEKQKDGS---SSDGA-PLAATDYMIRPEKSKPKLDTSKWPLLLKHYDQLHVRTAHYTPIPVGCSPLKRPIQEYIRYGVMNVDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGVVRLHAAI-----PSTSTLTRALETLTGALFQRPPLISAVKRQLRIRTIYQAKLLDYDSDRHLGVFWVSCQAGTYVRTLCVHLGLLTGTGGHMQELRRVRSGVLSENEHLVTMHDVLDAQYQYDTYKDEAYLRRVVKPLELLLTGFKRLVVKDSAVNAICYGAMLMIPGLLRFADDIDVNDEVVMITTKGEAIAVGIAQMTTAVMATCDHGIVAKIKRVVMERDTYPRRWGLGPVANRKKEMIKAGKLDKHGKPNADTPAEFLQWYKDLKS 418
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A7S3V9Q7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9Q7_9STRA) HSP 1 Score: 606 bits (1563), Expect = 4.660e-207 Identity = 299/407 (73.46%), Postives = 347/407 (85.26%), Query Frame = 1
Query: 118 DGASPIASTP--YMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSASAST 1332
DG++ +T +MI+P S PKIDTS WPLLLRNY DL RT+HYTPIPSG SPL R L+E++ YGVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVKAQQSAGKEY+G+VR HSA+ E +++ RAV TLTGALFQRPPLISAVKRQLRIRTIY+SKLIE+D DR+LGIFW SCEAGTY+RTLCVHLGL+VG GGHMQELRRVRSG L ED NLVTMHDVLDAQHVYD KDE YLRRV+MPLE+LL+ +KR+VVKDSA+NAICYGAKL IPGLLRFA I+I TEV++MTTKGEA+AV IA+MT+ +A DHG+VA IKRVIMERD YP+RWG+GP+AQRKK ++KEG L KHG+ N TP+++ YK + ++ST
Sbjct: 15 DGSAEAVNTSMGHMIEPSSHTPKIDTSKWPLLLRNYSDLNVRTSHYTPIPSGSSPLSRPLREHLSYGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKAQQSAGKEYIGVVRLHSAI-----EDTKQLNRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEFDKDRNLGIFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGILGEDNNLVTMHDVLDAQHVYDTTKDEKYLRRVVMPLEILLVNFKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDIGTEVVLMTTKGEAIAVAIAQMTTAVMATCDHGIVAKIKRVIMERDAYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNSSTPQDFLTGYKIVEGASST 416
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: B8C572_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C572_THAPS) HSP 1 Score: 604 bits (1557), Expect = 2.340e-206 Identity = 299/392 (76.28%), Postives = 337/392 (85.97%), Query Frame = 1
Query: 151 MIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSASA 1326
MI P S PK+DTS WPLLL+NY DL RT+HYTPIP G SPL R LK++I GVINLDKPANPSSHEVV+WIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVG+VR HSA+ E +++ RAV TLTGALFQRPPLISAVKRQLRIRTIY+SKLIEYD R+LGIFW SCEAGTYVRTLCVHLGL+VG GGHMQELRRVRSG L E+ NLVTMHDV+DAQHVYD KDE YLRRV+MPLE LL YKR+VVKDSA+NAICYGAKL IPGLLRFA I+IN EV++MTTKGEA+AVGIA+MT+ +A DHGVVA IKRVIMERDTYP+RWG+GP+AQRKK ++KEG L KHG+ N+KTPK++ + YK + +A
Sbjct: 1 MIAPSSHTPKLDTSAWPLLLKNYSDLHIRTSHYTPIPCGSSPLARNLKDHISSGVINLDKPANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGVVRLHSAL-----EDTKQLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIFWVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVLDENDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLETLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKGLIKEGKLDKHGKPNEKTPKDFLEGYKSVEGAA 387
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A0L0HVI7_SPIPD (H/ACA ribonucleoprotein complex subunit CBF5 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HVI7_SPIPD) HSP 1 Score: 605 bits (1559), Expect = 3.190e-206 Identity = 288/391 (73.66%), Postives = 340/391 (86.96%), Query Frame = 1
Query: 148 YMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSA 1320
YMIKP S P +DTSTWPLLL+NYD L RT HYTPIPSGCSPL R+++ Y++YGVINLDKPANPSSHEVVAWI+RILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVK+QQ AGKEYV ++R H A+ E+ +K+ +++ TLTGALFQRPPLISAVKRQLRIRTI++ KLIE+DN+RHLG+FW SCEAGTY+RTLCVHLGL++GVGGHMQELRRVRSGAL ED NLVTMHDV+DAQ VYD KDESYLRRV+MPLE LL TYKRVVVKDSA+NAICYGAKL IPGLLRF GI+IN EV++M+TKGEA+A+ IA+M++ ++A DHGVVA IKRVIMERDTYP+RWG+GP AQ KK+++++G L K+GR ND TP W ++Y D +A
Sbjct: 19 YMIKPTSVTPSMDTSTWPLLLKNYDKLNVRTGHYTPIPSGCSPLKRDIENYVKYGVINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQGAGKEYVAVLRLHDAI-----ESEKKLAQSLETLTGALFQRPPLISAVKRQLRIRTIHELKLIEFDNERHLGVFWVSCEAGTYIRTLCVHLGLLLGVGGHMQELRRVRSGALGEDDNLVTMHDVMDAQWVYDNTKDESYLRRVVMPLETLLTTYKRVVVKDSAVNAICYGAKLMIPGLLRFESGIDINEEVVLMSTKGEAIALAIAQMSTAEMATCDHGVVAKIKRVIMERDTYPRRWGLGPKAQEKKKLIQDGKLDKYGRSNDATPSTWTKDYVDYAA 404
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: A0A7S3DUJ0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DUJ0_9STRA) HSP 1 Score: 599 bits (1545), Expect = 3.320e-204 Identity = 299/424 (70.52%), Postives = 353/424 (83.25%), Query Frame = 1
Query: 55 MSDIRKKKKSKSSKKSHPVSTDGASPIASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAV-STLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSAS 1323
MS+ + KKK K+S S T + MI+P S PK+DTS WPLLL+NY +L RT+HYTP+P+G SPL R+LK++++YGVINLDKPANPSSHEVV+WIK+ILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGK+Y+G++R H+A+ E +K++R + STLTGALFQRPPLISAVKRQLRIRTIYDSKL+E+D DR+L +FW CEAGTY+RTLCVH GL+VG GGHMQELRRV+SG L E+ N+VT+HDVLDAQHVYD KDE+YLRRV+MPLEVLL YKRVVVKDSA+NAICYGAKL IPGLLRFA GIEIN EV++MTTKGEA+AV IA+MT+ +A VDHGVVA IKRVIMERD YP+RWG+GP+AQRKK M+KEG L KHG+ N TP ++ Q YKD S S
Sbjct: 1 MSESKSKKKRKASDGSAVAETSAGA-------MIQPASHTPKLDTSNWPLLLKNYHELHVRTSHYTPLPTGSSPLARDLKQHLQYGVINLDKPANPSSHEVVSWIKKILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKQYIGVLRLHAAL-----EDAKKLQRTIESTLTGALFQRPPLISAVKRQLRIRTIYDSKLLEFDKDRNLAVFWVQCEAGTYIRTLCVHAGLLVGTGGHMQELRRVKSGVLGEEDNMVTLHDVLDAQHVYDTTKDETYLRRVVMPLEVLLTNYKRVVVKDSAVNAICYGAKLMIPGLLRFADGIEINDEVVLMTTKGEAIAVAIAQMTTSVMATVDHGVVAKIKRVIMERDVYPRRWGLGPMAQRKKNMIKEGKLDKHGKPNANTPSDFLQSYKDFSKS 412
BLAST of mRNA_F-serratus_M_contig132.2377.1 vs. uniprot
Match: W7U954_9STRA (H aca ribonucleoprotein complex subunit 4 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U954_9STRA) HSP 1 Score: 600 bits (1547), Expect = 8.190e-204 Identity = 293/401 (73.07%), Postives = 342/401 (85.29%), Query Frame = 1
Query: 124 ASPIASTPYMIKPESAKPKIDTSTWPLLLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTIYDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRVRSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRVVVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIARMTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLTKHGRENDKTPKEWKQEYKDLSASA 1326
A+ + ST +MIKPE+A PK+DTSTWPLLL+NYD L RTA YTPIP G SPL R LKEY+RYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQ AGKEYVG+VR H A+ E K+ RAV TLTGALFQRPPLI+AVKRQLRIRTIY+SKL+EYD RHLG+FW SCEAGTY+RTLCVHLGL+VG GGHMQELRRVRSG L+E+ +L+TMHDVLDAQ+ YD KDESYLRR ++PLE+L KRVVVKDSA+NAICYGA+L IPGLLRFA GIE+N EV+M+TTKGEA+AVGIA+MT+ +A DHG+VA IKRV+MERDTYP+RWG+GP+A +KK ++KEG L KHGR N +TP+++ + ++ + A
Sbjct: 46 ATGLPSTEFMIKPETATPKLDTSTWPLLLKNYDQLHVRTARYTPIPMGSSPLKRPLKEYLRYGVINLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQGAGKEYVGVVRLHGAI-----EGESKLVRAVETLTGALFQRPPLIAAVKRQLRIRTIYESKLLEYDEKRHLGVFWVSCEAGTYIRTLCVHLGLLVGTGGHMQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVKDSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGMVAKIKRVVMERDTYPRRWGLGPVATKKKGLMKEGKLDKHGRPNAETPQDYLEAFEGKNGPA 441
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 676.8 |
| Seed ortholog evalue | 8.3e-192 |
| Seed eggNOG ortholog | 2880.D8LEX4 |
| Preferred name | DKC1 |
| KEGG rclass | RC00055,RC00523 |
| KEGG ko | ko:K01868,ko:K11131 |
| KEGG Reaction | R03663 |
| KEGG Pathway | ko00970,ko03008,map00970,map03008 |
| KEGG Module | M00359,M00360,M00425 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000154,GO:0000454,GO:0000455,GO:0000495,GO:0000723,GO:0001522,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003720,GO:0003723,GO:0003824,GO:0003964,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005697,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006259,GO:0006278,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0007004,GO:0007275,GO:0007276,GO:0007281,GO:0007444,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0009058,GO:0009059,GO:0009451,GO:0009506,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009982,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010638,GO:0010833,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016556,GO:0016604,GO:0016740,GO:0016772,GO:0016779,GO:0016853,GO:0016866,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019953,GO:0022412,GO:0022414,GO:0022613,GO:0030054,GO:0030154,GO:0030515,GO:0031118,GO:0031120,GO:0031123,GO:0031126,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031429,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033979,GO:0034061,GO:0034470,GO:0034513,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034964,GO:0035220,GO:0035295,GO:0040031,GO:0042127,GO:0042221,GO:0042254,GO:0042592,GO:0043085,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043487,GO:0043489,GO:0043628,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044703,GO:0045934,GO:0045935,GO:0046483,GO:0046689,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051347,GO:0051704,GO:0051972,GO:0051973,GO:0055044,GO:0060249,GO:0060255,GO:0060341,GO:0060429,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071897,GO:0072588,GO:0072589,GO:0080090,GO:0090304,GO:0090661,GO:0090666,GO:0090669,GO:0090670,GO:0090685,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902369,GO:1902494,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:1990481,GO:1990904,GO:2000112,GO:2000278,GO:2000573,GO:2001252 |
| EggNOG free text desc. | mRNA pseudouridine synthesis |
| EggNOG OGs | COG0130@1,KOG2529@2759 |
| EC | 6.1.1.3 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01007,ko03009,ko03016,ko03032 |
| Exons | 9 |
| Model size | 2728 |
| Cds size | 1602 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929281.6229482-UTR-F-serratus_M_contig132:134609..135681 | 1622929281.6229482-UTR-F-serratus_M_contig132:134609..135681 | Fucus serratus male | UTR | F-serratus_M_contig132 134610..135681 - |
| 1690962782.6040857-UTR-F-serratus_M_contig132:134609..135681 | 1690962782.6040857-UTR-F-serratus_M_contig132:134609..135681 | Fucus serratus male | UTR | F-serratus_M_contig132 134610..135681 - |
| 1622929282.1890585-UTR-F-serratus_M_contig132:143905..143959 | 1622929282.1890585-UTR-F-serratus_M_contig132:143905..143959 | Fucus serratus male | UTR | F-serratus_M_contig132 143906..143959 - |
| 1690962782.7230465-UTR-F-serratus_M_contig132:143905..143959 | 1690962782.7230465-UTR-F-serratus_M_contig132:143905..143959 | Fucus serratus male | UTR | F-serratus_M_contig132 143906..143959 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929281.6379197-CDS-F-serratus_M_contig132:135681..135801 | 1622929281.6379197-CDS-F-serratus_M_contig132:135681..135801 | Fucus serratus male | CDS | F-serratus_M_contig132 135682..135801 - |
| 1690962782.6198595-CDS-F-serratus_M_contig132:135681..135801 | 1690962782.6198595-CDS-F-serratus_M_contig132:135681..135801 | Fucus serratus male | CDS | F-serratus_M_contig132 135682..135801 - |
| 1622929281.6657064-CDS-F-serratus_M_contig132:136283..136577 | 1622929281.6657064-CDS-F-serratus_M_contig132:136283..136577 | Fucus serratus male | CDS | F-serratus_M_contig132 136284..136577 - |
| 1690962782.6356716-CDS-F-serratus_M_contig132:136283..136577 | 1690962782.6356716-CDS-F-serratus_M_contig132:136283..136577 | Fucus serratus male | CDS | F-serratus_M_contig132 136284..136577 - |
| 1622929281.6821582-CDS-F-serratus_M_contig132:137252..137441 | 1622929281.6821582-CDS-F-serratus_M_contig132:137252..137441 | Fucus serratus male | CDS | F-serratus_M_contig132 137253..137441 - |
| 1690962782.645635-CDS-F-serratus_M_contig132:137252..137441 | 1690962782.645635-CDS-F-serratus_M_contig132:137252..137441 | Fucus serratus male | CDS | F-serratus_M_contig132 137253..137441 - |
| 1622929281.70529-CDS-F-serratus_M_contig132:138076..138202 | 1622929281.70529-CDS-F-serratus_M_contig132:138076..138202 | Fucus serratus male | CDS | F-serratus_M_contig132 138077..138202 - |
| 1690962782.6551702-CDS-F-serratus_M_contig132:138076..138202 | 1690962782.6551702-CDS-F-serratus_M_contig132:138076..138202 | Fucus serratus male | CDS | F-serratus_M_contig132 138077..138202 - |
| 1622929282.1163-CDS-F-serratus_M_contig132:139084..139314 | 1622929282.1163-CDS-F-serratus_M_contig132:139084..139314 | Fucus serratus male | CDS | F-serratus_M_contig132 139085..139314 - |
| 1690962782.6643503-CDS-F-serratus_M_contig132:139084..139314 | 1690962782.6643503-CDS-F-serratus_M_contig132:139084..139314 | Fucus serratus male | CDS | F-serratus_M_contig132 139085..139314 - |
| 1622929282.1308131-CDS-F-serratus_M_contig132:139898..140071 | 1622929282.1308131-CDS-F-serratus_M_contig132:139898..140071 | Fucus serratus male | CDS | F-serratus_M_contig132 139899..140071 - |
| 1690962782.673554-CDS-F-serratus_M_contig132:139898..140071 | 1690962782.673554-CDS-F-serratus_M_contig132:139898..140071 | Fucus serratus male | CDS | F-serratus_M_contig132 139899..140071 - |
| 1622929282.143949-CDS-F-serratus_M_contig132:141260..141430 | 1622929282.143949-CDS-F-serratus_M_contig132:141260..141430 | Fucus serratus male | CDS | F-serratus_M_contig132 141261..141430 - |
| 1690962782.6827037-CDS-F-serratus_M_contig132:141260..141430 | 1690962782.6827037-CDS-F-serratus_M_contig132:141260..141430 | Fucus serratus male | CDS | F-serratus_M_contig132 141261..141430 - |
| 1622929282.1561708-CDS-F-serratus_M_contig132:143009..143305 | 1622929282.1561708-CDS-F-serratus_M_contig132:143009..143305 | Fucus serratus male | CDS | F-serratus_M_contig132 143010..143305 - |
| 1690962782.6940298-CDS-F-serratus_M_contig132:143009..143305 | 1690962782.6940298-CDS-F-serratus_M_contig132:143009..143305 | Fucus serratus male | CDS | F-serratus_M_contig132 143010..143305 - |
| 1622929282.1715443-CDS-F-serratus_M_contig132:143901..143905 | 1622929282.1715443-CDS-F-serratus_M_contig132:143901..143905 | Fucus serratus male | CDS | F-serratus_M_contig132 143902..143905 - |
| 1690962782.712387-CDS-F-serratus_M_contig132:143901..143905 | 1690962782.712387-CDS-F-serratus_M_contig132:143901..143905 | Fucus serratus male | CDS | F-serratus_M_contig132 143902..143905 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig132.2377.1 >prot_F-serratus_M_contig132.2377.1 ID=prot_F-serratus_M_contig132.2377.1|Name=mRNA_F-serratus_M_contig132.2377.1|organism=Fucus serratus male|type=polypeptide|length=534bp
MSDIRKKKKSKSSKKSHPVSTDGASPIASTPYMIKPESAKPKIDTSTWPL LLRNYDDLLCRTAHYTPIPSGCSPLMRELKEYIRYGVINLDKPANPSSHE VVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYV GLVRFHSAVGGNVDEARRKVERAVSTLTGALFQRPPLISAVKRQLRIRTI YDSKLIEYDNDRHLGIFWASCEAGTYVRTLCVHLGLIVGVGGHMQELRRV RSGALSEDGNLVTMHDVLDAQHVYDKKKDESYLRRVIMPLEVLLLTYKRV VVKDSAINAICYGAKLTIPGLLRFAQGIEINTEVIMMTTKGEALAVGIAR MTSLDLAMVDHGVVALIKRVIMERDTYPKRWGMGPIAQRKKRMVKEGLLT KHGRENDKTPKEWKQEYKDLSASASTKKAIVQETPTPKEEGTEETKVQGG EDAVTGQGNEKEETGDETGETGDDKEKGEKKKKKKKKDKDKQKKSKKRTA EGSDEDANTATSSPNGEKKKKKKKIKKELPDDA* back to topmRNA from alignment at F-serratus_M_contig132:134610..143959- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig132.2377.1 ID=mRNA_F-serratus_M_contig132.2377.1|Name=mRNA_F-serratus_M_contig132.2377.1|organism=Fucus serratus male|type=mRNA|length=9350bp|location=Sequence derived from alignment at F-serratus_M_contig132:134610..143959- (Fucus serratus male) GCCGCAGAGACCGCCCTCAGGAAATAGCTTGACGTGCTTTACTCCAAAAC
GACCATGAGTGAGTGAACACTAGAAAAGTGATACTTGTCAGCCCCAGATC
GTCGTAAATCCATTTTAAACTGTCAGATGCATGTCTTGAATGTAAAGGGT
CCTTTCCCCGCCCTTCATGTGAAACATCTTGGTTGTGTGGCCCGATCTTG
TCCGTGCAAACCATCCATACATTGCGAAGACTATCTAGCACCGCGAGGTT
TTGGAGCATGTTGGTTAGGTCTTGCCACAGCCTTGTGTATCTTGGCTGAG
TGTTCGAACGTCTATTGCTATCATTGGTGTCGATATCTTACTCTCGCCTT
CTCTCGGGGAGAGTCGGTTTGGGGCTGGAGTACATCCTTCAGATTGCAGT
ACAAAACTCGTGAAGTACGATTACGAACCACAAGTACAGGTATTTGTTGT
GTATTTCTGTAATCGCACGCAAGATTTGTTTTTGTTTTTTGTGTGTAAAA
AGAAAATAAACCACCCTTTACGGGCGACGAGAGAGACTGGTTATGCACGC
AAGCGTGTCGCAAGTGAAGATGACCTGCGCTACCAGCCAGCAGCCGGCGT
CATCCAGCGCTTGAGACCCTCTTTCTTCTCTGCGTGGCTACGCGCAATTT
TCAGGTGACATCAGAAAGAAGAAAAAGAGCAAGAGCTCAAAGAAGTCTCA
CCCGGTCAGCACCGACGGTGCCTCTCCGATTGCCTCGACGCCCTACATGA
TCAAGCCCGAGTCAGCGAAACCGAAGATCGACACGAGCACCTGGCCGCTG
CTGCTTCGAAACTACGATGATCTCCTGTGCCGAACCGCCCACTATACGCC
GATCCCCAGCGGGTGCTCGCCGCTGATGCGTGAGCTGAAGGAGTACATTC
GTTACGGGGTCATCAATCTCGACAAGCCGGCGAATCCTTCCTCCCACGAG
GTTCGATCGAACATACCCAAATGACCCAAATCGTCGTTTGGAACATACCA
CCGGACCAGTATTTAGTGTACTCGCGTTTCTAATGTGGTGTCGAGGTGAA
TCAAACCGTAGACGGTATGGTACTGTGCACGTACCAGTTGACAGTTTGGA
AAACCACGCCCCGGGGATAGACAGTGAAAGTCCCCTCCCTCCGCCTAGAT
TCTCAACCCGCTCTTCGTTTTGACCACACCAGCGTCGTAATGGTCGCAAG
TCGTAATAAAACACCTTTGGTAAGATCTCGTCAGGATCTGTATTTTTTGT
ATCCATGTATGGGTCTGTTCTTAAACCGCGCACTTCATTCTAGCCCAAGT
TTTGAACTCAACACGGTTCGTTGTCGCCGAGGTTGAGCAAGAAGACAAGC
ATATCACCGGGGGTGTCGGCTTACTACACACTCCGTATTTGCCTAACTGA
ACAGTCGAGTCATTTGTTGCATTGTTCTTGACGGTGGAGCTGAAATCAAA
TACTGGGACCATTTAGGTAATAACCCCTTAGATGGTGCTCTGTATCTCGA
GCGCTTCGGTCTTCCAATGCGGTTCCAATCAAGAATCGGGCATCGCAAAG
GGGGCCGGAGCTATTCGACTATAATAAGTAGTTCGTGACACAAGTGCTTA
TCAAAAGTTTCAAGTTCTCGCGTAGCGAAGTGACGGCAAAAAACTTTTTG
AATTCAAGCTTCTGAGACTAATCGCCGACAGTCGGTTGAGTTCGATGAGT
CCTGCTCCTCAGCACAAGCTACAATACTATAATTTCAAGAGGTCAAGCAT
TAGACAATCGGCCAAGATTTTGACCGTGCTCCGATGCTCTTTCGATCTAG
ATCGCCCCTTTAGTCAGGTACCTGTAATATATCTAGAATTTTTTTTCTTC
CCCCGACTCTTGGTGAGTACAATACTTCACTCGACTCCGTATTATGTAAA
TGAATGTAATTGGAAAGCAATGGATCCGTCCATCATACGCTCGATCCGAC
TGATCGCGAGCACGATGGAGTGATGCTATGGTGAGAATGGCGATACTAAA
GCTCCAGTCTCTCACTTCGCTGTCTCGTAGGGGTACGGTATCCGGGGCAT
TTATTACTAGTATTAATAGTAGTAGTAAGACAATATGAAGACGTTACCGG
CTACGATCATCTCTGCAAGAGTCCACACCAGAACAGTTGAAAATCATACC
GCTGCACAAGCTTAATCACAAATCGAGTTTCTTGGGCTTGGGGGGGGGGG
CGGGGGGGTAGTAGAAGCTGCCTTCCAAATCTTTGTTAAAGTTAAAGTGT
GATCGAGACTTTGGACCCCTGATCGAGACTCGTTAAAAGGAAGCGGCTTT
TATCCAAAACGTGGAGAGAAAGACCCGTGTAAGAGTTGAAATCGCTGGGA
ACTAGACCTCTACTTTTGTATATTGAATAAACAACCCCCAAGAAGTTTTA
TCCCTTGCCCTCGTTAGTCCCATCGGCCTCAGTTTAACATACTGTACTAC
ATATATATATGTACTCCTGTATCCGTCGGCGTGTCTGTTGTGACCTTGAA
ACGATATCCGTGCTACATGGTGCGGTCAGGTTGTTGCGTGGATAAAACGT
ATCCTGAGGGTGGAGAAGACGGGCCACAGCGGCACGCTCGACCCCAAGGT
GACCGGATGCCTGATCGTGTGCATAGACCGTGCCACCCGTCTCGTGAAGG
CTCAGCAGAGCGCGGGGAAGGAGTACGTCGGCCTCGTCAGGTTCCACAGG
TGACGGAGAACACACTCAAAACAGCACTTTTGAGGTGTGAAATGCAGAAT
GGATCGAAATGGTCAAGACTTGCACGGTTTGTCTAATCAGAGAGAGAATA
TGTAATAAAGGGTGTTGTTGTACGATAGTGAGCCGAGCTGTACAACAGGA
GGCAGTGTTTTATCATGGATTCTGTGTAGAATTTAGCACATCCTATCGGC
GTTCCCACTTGTCTATAGTCTAATACCGTAGGAAGATGCTGTCCTAACCA
ACCTTCTTACTAATACTATCGATAGTACTGAAATGGTTCTGTACTAGACA
GCTGTACACTCGCTGTAGAAAACCACTTGCTATCAATAGCACTGTTGTAC
TGGAACGGCTCAGATGTGCGGCGACGTTGACGGTCTCTTGGTTTTGCGAC
CGTGGGGACGGGGTATTTTTGGAGCGCGGAGGAGGGCAGCGATCGACGGA
CTTGGACTCGCATGTTCTGTACCACGCCCTCGCACGCGTATTCACCCCTG
CATTACCCCTGTATCACCCAGGCGGGCCGTAGGCGGGGACGGAACAAACG
TTTCCACCACATAACACTAAATTACGTACCACATCTCATACTTGTGGACA
GTGCTCTGGTATCCTACAGTTTTCGGTGGGAAACCATCCAGTAAAATTTA
TCGCGAACTACAGTATGGCGTTTGCCGTTAAAAAAAGAAAACGCGTGGCC
ACCTGTCTACGATCATTGAAAGCACCAATCATATCATCTTCGTGATAAAT
ACAACAATCATAGTTATCATGAATCTACCAATCGTAATTGCCGTGAAACC
GCCAATGACGATGACCATGACTCCGCCAAGTCATAAATCACCAGGAATCC
ACTAATCATGATCACACCATGTATCCACCAACCATACCCCCATGAATCCA
CCAATCATGTTTTATCACAAATCTATTGGTCGTAAGTACGAGGATCCCAC
CAATCGTAACAGTCGCGATGAATCCAGTAACTGCAACAGTCGCCATGAAT
CTATCATTCACTATCGCCATCAATCCACTGCGTTTACTGCTGTGAAATAT
ATATATATCAACTAAATACAGTCAACATGAATCCACCATTTGTAGCCCGC
CAACGATAATTATTAATACCACGAATCCAACACTGGTATGGTATCATAAT
CGCCACAAAATCCAATAACGAAAACCGCTGCCGAGCAGCGCGGTGGGCGG
CAACGTAGACGAGGCTAGGCGCAAGGTCGAGCGAGCCGTGTCAACGCTAA
CGGGGGCTCTCTTCCAAAGGCCTCCCCTTATCTCGGCGGTGAAGCGGCAG
CTGCGGATCCGAACGATCTACGACAGCAAGCTGATCGAGTACGACAACGA
CCGTCACCTGGGTGGGTTGCAGTCGATTTAGGGTACTTTTTTTCCTTTAC
CCTGCTTGCCGCCTCGAGCACAAAACGCCTCACTACGATTGCAAAACCCT
GAAATAGATTCAATCGGAGTATATATAGTGGCAAGCCAGCTGTACCTGGT
AGCAGTTTTTGTAGTGGAATTGACGTGGGGAGCATCGCGGAGGAAACTTT
GGTGTTTGTCTTTAGTTCCCTATAACAATATAAAATAGAAGATTCAAAGG
TTCACCGGGGGAAGGGTCAAATATTCCTGGCGGGCGTTTTTGCTGAGGTA
AAGGTATACTCTAGGTAGAAACCTCCTGCTGAAGGGAAAATAACTGCGTG
GGTACTGCGTGTGTTCTGGATCGCCGCCTGTTATAAAAATTTCGCACAAA
TAATAAGTGTTATGTGTTTGAAGCTCGACAGCGCTTGGTCCTGCTATGTC
GAGAAAACCTTTTCTACTATGAAACCCCGAAACAATACACTCTTTCTTAA
GTACGATGTGTGAAGCGGGATCTGAAGCTGGAGCCCGCCTCTTCCCCCAG
AGACTCGAACCGCCTCCTCTCTCATCTCGTATTTTGCTTTTCCAGGGATC
TTCTGGGCCAGCTGTGAGGCAGGCACGTACGTGCGAACTCTCTGCGTGCA
CCTCGGGCTGATCGTTGGGGTGGGGGGTCACATGCAGGAGCTGAGGCGGG
TGAGGTCCGGAGCGCTTTCGGAGGACGGGAACCTGGTGACGATGCATGAC
GTCCTGGACGCGCAGCATGTCTACGACAAGAAGAAGGACGAGTCCTACCT
CCGAAGGGTCATCATGCCTCTCGAGGTATTTGGGAAGAAGTCATTTTGGT
AGTCCGGGCCTCGTGCCTGGCCAACTGCAATAAACGTCCGTTCGCCCGCG
TACTGAGAAGACTTTAATTAGTATAATAGTATTCCAAGACTTATAACCAC
GTAGTCCGGCGGAGCGGAATCTGTGAGTTCGAGTCTCGGTCAACACGTTT
TTTTGTCATTTTTTTTTTAACTATTGTTATGTCTCCGTGGTCCGAAAAAG
CACAAGAGCGAAAGCAACAAGAGCAAAGTTTAAAACGATTACGATTGGTT
GAGGTGTGGGAGCGTTGAATCTGTATCGCAGGCAAAAATTGTTACAACAG
GCGTGGACCGGGCATAGATGACTAGATATATCGAGACCACGCCAACGTCC
CGATATGCATGGTTGGAGTGGTAGATGTAGCACTTTGATTGGGGCCATCA
GTACAAACGACACGGCTCCTTTGTTTACTTCGGACGCTTGGTCTTTCCTC
CGTATTTCTGTGTGTGCGTTTTTTGGAGGACTGTTGAGGAGGGGTTTTTT
CTCGAGGGGGGGGGATGGGGGGGGGTATTTTCTGGACTTTTTTTTTCGTC
TGTAGATTGTCCTTGAGTCGTTGTTGAATTATGATCAAGATACCCGTCGT
GGATTGCGGGGTGCTCGAGTACAACTCAACTGAGTATCCGTGGACGGTTA
GTGTTTTTTGGCGCGAGGATGCTCGTGACGGGGATGATCAAAATTAGCCT
ATAATCCTGGCTTGGCTTGGCTTGACTTCCTCCCCTGGGCTGTATATCTC
TGCCGTACAGCGCACCCCAAGTATAAATAAGGCGCGTATTCCGTTGATCC
GCCACTTGCCTAGTTTTAAATTGTAGTTATAAATACGATGCGGGTGCTTG
ATTTCAGGTGCTGCTCTTGACGTACAAGCGGGTCGTGGTGAAGGACAGTG
CTATCAACGCCATCTGCTACGGGGCCAAGCTCACGATCCCGGGGCTCTTG
AGATTCGCGCAGGGTATCGAGATTAACACTGAGGTGAGTGGTGAGAGAGC
GTGTCCGTCCTCATCCGGCTGCTCAATAGAATCAATGGTGGAGTGCTCAG
AAGGTCTAGGCGCGTTCTAGTTTTTCTGTAATCATTCGTCGCCCGAGTGG
TCTAGTAGGTAACCTCCATACTTGCTAGTGCGGAAGTCGTGAATTCGATT
CTTACCTAGAGTAGATTTTGGGTTCTTTCTTTCGTAACGGAAAGCGTAGG
AACGTGAGTAAGTAAAATTCAACCATTGGTTGACGAGTTGTAAGAGTGCT
GAACTTGCATCACGATAAAAATTCGTAAGGCGTGAACCGGGAAGAGATGG
AAAGATCCTTTGTGACCACAGGCAGGATGGTAATTAGAGGTCCATCGGCT
ATAAGTGTGCTTAAAAAATAAATAAATAAAAAATGGTGGAGTGATTGCAG
GCAACAAGGGGGGAATAGCGCACCTTGGTTGCGCGATCCGGGACGGACCC
ACCCGTGAAATGGAGCGATTGTGGCATCCTGGTTCGGTATAGTTCTAGTC
GAGTCATCCCCGTGCGCACGGTAGAAAAACTTGATTCGACCGCGTTGAAT
GTTCTATTGAATGTTGAATGTTCTATTGAATGTTGAATTTTGTGTTCTAT
CCTTGATGGATCGAGTAGGTGATCATGATGACCACCAAGGGAGAAGCGCT
CGCAGTGGGCATCGCTCGGATGACCTCGTTGGACCTTGCCATGGTGGACC
ACGGCGTGGTTGCCTTGATCAAGAGGGTAATCATGGAACGAGACACGTAC
CCCAAGCGGTGGGGGATGGGACCGATCGCGCAGAGGAAGAAGCGCATGGT
GAAGGAGGTGCGTACGCGGCGGAGTTTTCGCACCTATTGTAGGTTTACAC
TGTTTCTTCTTTATAAAGGTTGGGCTGCCTACCTACAGTATGTCTGTCTC
CTTGTAGAGCGGCAGCACTGCAGCAGCAGCACCACGATTAACACGAAATG
TATTGATTTAGATATAGACGAGGTGCACGATCTGTTTTGGCGAAGAACAA
GTGGTAGTATTAATTGTCATATATATATTTCTTCTGTTTGCCGGTCTTTT
TTTTATGGTGTCGGCGTTTTTGTTTTTTGGGTTCGATCGTCGTCGTTCAT
TTCGTTTTGCTGTTCACCCATGTTTTGGTGCGCCATCAGCTCTGCTTGAT
TGAGGAGGAGTTCCTCCCCCCCCCCTTTTTTTGGCATAAAACTCAAGCAA
CAACATCCAAAACTCTTCGATTATTTAATAATCGTATTTCGGACAGTTTT
CGTCCCGTCTCAAAGGATTGCGCTATGCCCGTGTGCGCACGATTTCTCTG
TGAAAAGCGTGTTCTTCTACCATCTGACAGTGCCTGTACCATCGGACAGT
GCTCGCTAGAGCTTGCTCCGGTGGTAAGGTCAGGCTACCGCGCCATGACC
GATCTCGAATTACAACCCCTTTGCCCCGTTTGCTAAACCCGCCCCTTCCC
CCCCCCCTGTAACTCCGTCACTCCGGCGGTAGGGGCTATTGACGAAGCAC
GGTCGAGAGAATGATAAGACTCCCAAGGAATGGAAGCAAGAATACAAGGA
CCTGAGCGCTTCCGCTTCTACCAAGAAGGCGATCGTCCAGGAGACACCAA
CACCAAAGGAAGAGGGGACGGAGGAAACGAAAGTGCAGGGGGGGGAAGAC
GCGGTGACCGGTCAGGGGAATGAGAAAGAGGAGACGGGCGACGAAACGGG
GGAAACAGGGGATGACAAGGAGAAGGGCGAAAAGAAGAAAAAGAAAAAGA
AGAAGGACAAGGACAAGCAAAAGAAGGTAACAGTACTCCATCAAGGCACT
GTATAAGGTACTCGTAAAAAAGGTACAACAGGAGGTGCACATCCGTTCAA
TTGATCCAGAAAGCACTCGTCTAAAAGGTACAGTACTCGGACAAGTCGTG
GTGGATTGTCTAGAAACACACGTCGTTGTAGGTCGGCCGTCTTTGGAATA
GCACGGTGTATTCACTGCTGTCTTGGAATTGTCTCCCAAGGGTGTGCTTG
CTGTTGTGTTGAGATTGTTGTATGTCGTGAGCACGCGTTACTGCTCCGCT
GGTTATCTACGCAATGAAGACATTATGCGCCCGCCCGCGACCCCGCATGC
CACGCGCCGAGATATTTTGCCCAGAGTATGACATAATGCGCCCAAGTCTC
GTCTTCCTGTATGTCCCCCGCGAGCGTAACGCCTCTGACTGTTTTGTACT
CCCTTTCCCGCTGTTTTTTTTTACTTCTGTCCCCACAAAAATAAATATCT
CCACACAGTCGAAAAAGCGGACCGCGGAGGGTAGTGACGAAGACGCTAAC
ACGGCCACGAGCAGTCCCAATGGGGAGAAGAAAAAGAAGAAAAAGAAGAT
CAAAAAAGAGTTGCCGGACGACGCGTGATTTTACACTAGTTAGCACTATG
ATAGTATGCAGCGTTCGCTAAAGGCAAGGACGAGGAGCTGTGGGCGCGAT
TGACAGGCTCTGGAAAAGAAGAAGAAAAAAGTGGGCCGGCGTCCGTCTCT
GCGCCCATGTGTTGCGGTGTGTGCCATTGCCTCCCACCTATGAATGTGTG
AAGACATTCGTCGTGACTCTTTGTGATTGGGGCTTGATGTCTTAGAATAT
TGGTCGGCATGCATGAAAGCAAGGTAGGCGCGGGGACGCGGGGCTAGTTG
CTCGATTGCTGTTTTCCATCGAGAATCAAGTGGCATCGGCGATGAGCAAC
GGTGTAGTGGTCAAGGGGGGAACACGTTTTTTGGAAGGTAGGTGTTAGGC
TTTTGCTCTCGAAGGGGCCGTGAAATCTACTGGTAATAGCATTCCGCATG
CGCACCAGCGTGCACCGGTAATTATCTTTCTAATAATATTACGTTTCTAG
CTATATTGGTATGCTGTTGTATAGTCAAGCGGGGATGCCCCAAGGTCATC
TAACTCTTCTTATAAAGAGATTCGACGTTTTACGTGACAAGAGCCGAGTG
TGTCTTGGAGGCCTCGAGGCAGGTCGCCGAAGATCCGGTCTGATCGGGAG
AGAAAACGCAGGTGAACTGCGCTCTCAACGAGCCTCGCCCCCCACAGCAG
TACACGCCTCTTTTGGAACTCAATGAAAACGTATCGAGCGGCGGATATTG
GTGATCGTCATTTTCAGCAGACTGAGCATCAACATGAACCGTTTATAGTT
GCCAATCAACCGGGGGTGTAGTTGGCAAGTTCCTGGCAGGAATCTACGCA
GTGCTCCTTTTGACGACCTCGCTTATCTATAGTATAGTTCAAGAAAGCCA
CCCGGTAGTCGTCCAGTCCATGAACCGCTCGAAAGGGCACCAGGTTACTG
CTACAAGCCCCTCCCCCCCAAGCCGCCTCAGTTGGTCCTTTGGAATAATT
TTTCTTCTTTTATGGGAACATGTATAAATAATCAACGACTTCAAGTGTGC
TCTTGTAATCTTGTCAATTTTTGGCGATTGTGCCCTGCTTTTTACCAGGT
back to topCoding sequence (CDS) from alignment at F-serratus_M_contig132:134610..143959- >mRNA_F-serratus_M_contig132.2377.1 ID=mRNA_F-serratus_M_contig132.2377.1|Name=mRNA_F-serratus_M_contig132.2377.1|organism=Fucus serratus male|type=CDS|length=3204bp|location=Sequence derived from alignment at F-serratus_M_contig132:134610..143959- (Fucus serratus male) ATGAATGAGTGACATCAGAAAGAAGAAAAAGAGCAAGAGCTCAAAGAAGT CTCACCCGGTCAGCACCGACGGTGCCTCTCCGATTGCCTCGACGCCCTAC ATGATCAAGCCCGAGTCAGCGAAACCGAAGATCGACACGAGCACCTGGCC GCTGCTGCTTCGAAACTACGATGATCTCCTGTGCCGAACCGCCCACTATA CGCCGATCCCCAGCGGGTGCTCGCCGCTGATGCGTGAGCTGAAGGAGTAC ATTCGTTACGGGGTCATCAATCTCGACAAGCCGGCGAATCCTTCCTCCCA CGAGGTGACATCAGAAAGAAGAAAAAGAGCAAGAGCTCAAAGAAGTCTCA CCCGGTCAGCACCGACGGTGCCTCTCCGATTGCCTCGACGCCCTACATGA TCAAGCCCGAGTCAGCGAAACCGAAGATCGACACGAGCACCTGGCCGCTG CTGCTTCGAAACTACGATGATCTCCTGTGCCGAACCGCCCACTATACGCC GATCCCCAGCGGGTGCTCGCCGCTGATGCGTGAGCTGAAGGAGTACATTC GTTACGGGGTCATCAATCTCGACAAGCCGGCGAATCCTTCCTCCCACGAG GTTGTTGCGTGGATAAAACGTATCCTGAGGGTGGAGAAGACGGGCCACAG CGGCACGCTCGACCCCAAGGTGACCGGATGCCTGATCGTGTGCATAGACC GTGCCACCCGTCTCGTGAAGGCTCAGCAGAGCGCGGGGAAGGAGTACGTC GGCCTCGTCAGGTTCCACAGGTTGTTGCGTGGATAAAACGTATCCTGAGG GTGGAGAAGACGGGCCACAGCGGCACGCTCGACCCCAAGGTGACCGGATG CCTGATCGTGTGCATAGACCGTGCCACCCGTCTCGTGAAGGCTCAGCAGA GCGCGGGGAAGGAGTACGTCGGCCTCGTCAGGTTCCACAGCGCGGTGGGC GGCAACGTAGACGAGGCTAGGCGCAAGGTCGAGCGAGCCGTGTCAACGCT AACGGGGGCTCTCTTCCAAAGGCCTCCCCTTATCTCGGCGGTGAAGCGGC AGCTGCGGATCCGAACGATCTACGACAGCAAGCTGATCGAGTACGACAAC GACCGTCACCTGGCGCGGTGGGCGGCAACGTAGACGAGGCTAGGCGCAAG GTCGAGCGAGCCGTGTCAACGCTAACGGGGGCTCTCTTCCAAAGGCCTCC CCTTATCTCGGCGGTGAAGCGGCAGCTGCGGATCCGAACGATCTACGACA GCAAGCTGATCGAGTACGACAACGACCGTCACCTGGGGATCTTCTGGGCC AGCTGTGAGGCAGGCACGTACGTGCGAACTCTCTGCGTGCACCTCGGGCT GATCGTTGGGGTGGGGGGTCACATGCAGGAGCTGAGGCGGGTGAGGTCCG GAGCGCTTTCGGAGGACGGGAACCTGGTGACGATGCATGACGTCCTGGAC GCGCAGCATGTCTACGACAAGAAGAAGGACGAGTCCTACCTCCGAAGGGT CATCATGCCTCTCGAGGGATCTTCTGGGCCAGCTGTGAGGCAGGCACGTA CGTGCGAACTCTCTGCGTGCACCTCGGGCTGATCGTTGGGGTGGGGGGTC ACATGCAGGAGCTGAGGCGGGTGAGGTCCGGAGCGCTTTCGGAGGACGGG AACCTGGTGACGATGCATGACGTCCTGGACGCGCAGCATGTCTACGACAA GAAGAAGGACGAGTCCTACCTCCGAAGGGTCATCATGCCTCTCGAGGTGC TGCTCTTGACGTACAAGCGGGTCGTGGTGAAGGACAGTGCTATCAACGCC ATCTGCTACGGGGCCAAGCTCACGATCCCGGGGCTCTTGAGATTCGCGCA GGGTATCGAGATTAACACTGAGGTGCTGCTCTTGACGTACAAGCGGGTCG TGGTGAAGGACAGTGCTATCAACGCCATCTGCTACGGGGCCAAGCTCACG ATCCCGGGGCTCTTGAGATTCGCGCAGGGTATCGAGATTAACACTGAGGT GATCATGATGACCACCAAGGGAGAAGCGCTCGCAGTGGGCATCGCTCGGA TGACCTCGTTGGACCTTGCCATGGTGGACCACGGCGTGGTTGCCTTGATC AAGAGGGTAATCATGGAACGAGACACGTACCCCAAGCGGTGGGGGATGGG ACCGATCGCGCAGAGGAAGAAGCGCATGGTGAAGGAGGTGATCATGATGA CCACCAAGGGAGAAGCGCTCGCAGTGGGCATCGCTCGGATGACCTCGTTG GACCTTGCCATGGTGGACCACGGCGTGGTTGCCTTGATCAAGAGGGTAAT CATGGAACGAGACACGTACCCCAAGCGGTGGGGGATGGGACCGATCGCGC AGAGGAAGAAGCGCATGGTGAAGGAGGGGCTATTGACGAAGCACGGTCGA GAGAATGATAAGACTCCCAAGGAATGGAAGCAAGAATACAAGGACCTGAG CGCTTCCGCTTCTACCAAGAAGGCGATCGTCCAGGAGACACCAACACCAA AGGAAGAGGGGACGGAGGAAACGAAAGTGCAGGGGGGGGAAGACGCGGTG ACCGGTCAGGGGAATGAGAAAGAGGAGACGGGCGACGAAACGGGGGAAAC AGGGGATGACAAGGAGAAGGGCGAAAAGAAGAAAAAGAAAAAGAAGAAGG ACAAGGACAAGCAAAAGAAGGGGCTATTGACGAAGCACGGTCGAGAGAAT GATAAGACTCCCAAGGAATGGAAGCAAGAATACAAGGACCTGAGCGCTTC CGCTTCTACCAAGAAGGCGATCGTCCAGGAGACACCAACACCAAAGGAAG AGGGGACGGAGGAAACGAAAGTGCAGGGGGGGGAAGACGCGGTGACCGGT CAGGGGAATGAGAAAGAGGAGACGGGCGACGAAACGGGGGAAACAGGGGA TGACAAGGAGAAGGGCGAAAAGAAGAAAAAGAAAAAGAAGAAGGACAAGG ACAAGCAAAAGAAGTCGAAAAAGCGGACCGCGGAGGGTAGTGACGAAGAC GCTAACACGGCCACGAGCAGTCCCAATGGGGAGAAGAAAAAGAAGAAAAA GAAGATCAAAAAAGAGTTGCCGGACGACGCGTGATCGAAAAAGCGGACCG CGGAGGGTAGTGACGAAGACGCTAACACGGCCACGAGCAGTCCCAATGGG GAGAAGAAAAAGAAGAAAAAGAAGATCAAAAAAGAGTTGCCGGACGACGC GTGA back to top
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