mRNA_F-serratus_M_contig1319.2363.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1319.2363.1
Unique NamemRNA_F-serratus_M_contig1319.2363.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: D7G2B6_ECTSI (Histidinol dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2B6_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 1.610e-232
Identity = 348/414 (84.06%), Postives = 374/414 (90.34%), Query Frame = 1 
Query:    1 ASEADMPVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            ASE+DMP LKV+ VD+VPTV +DPVDP+AREQA+ IV+DV+SGG KSL+AQALRLGDIK+E D ++L    MK AFD LPEED+QVL RTKDRVE FAKAQRAALTD S PIPGG AGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTAR AGV KVVVASPRPA AT+AAAHVSGADALLCVGGAQAVAAMAFGVGGVP CDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTAD+ETVAADLLAQAEHDTEARPILV+TS  +V +VN CL++RLA LPTRDTA EAVKKGFAVVCKD+ EAV VSDLVAPEHLEIQT D QK+   +CLHYGGLFIG RAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRID+ +PSQ L  DA+HLARMEGL
Sbjct:    2 ASESDMPELKVMTVDQVPTVKADPVDPVAREQAKAIVDDVESGGTKSLVAQALRLGDIKSESDPLLLGPAEMKAAFDELPEEDRQVLVRTKDRVETFAKAQRAALTDASVPIPGGMAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARAAGVSKVVVASPRPAAATVAAAHVSGADALLCVGGAQAVAAMAFGVGGVPPCDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADVETVAADLLAQAEHDTEARPILVSTSELLVAEVNACLKKRLAVLPTRDTALEAVKKGFAVVCKDVAEAVAVSDLVAPEHLEIQTEDSQKVA-DSCLHYGGLFIGRRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDEAQPSQALVRDAVHLARMEGL 414
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: A0A835YMH6_9STRA (Histidinol dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH6_9STRA)

HSP 1 Score: 505 bits (1301), Expect = 2.210e-175
Identity = 270/411 (65.69%), Postives = 322/411 (78.35%), Query Frame = 1 
Query:   10 ADMPVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            A+ PVL+++  +EVP +  DPVDP A  QA+ IV+DV+  G   L   ALRLGDI       VLD+  MK AFD+LPE+++ +L RT+DR++ FA+ Q  ++  M   IPGG AGHT+SPM+VAGCYAPGGRYPLPSSV+MTAVTAR AGV  VVVASPRPA  T+AAAHV+GAD LLC+GGAQ +AA+AFG   VPACDIIVGPGN WVTAAKSLV GRCAIDMLAGPSEVL IAD +AD + +AAD+LAQAEHDT+ARPILVT  A++  +VN  +  RLA LPTRDTA+EA KKGF VVC DMD A+ VSD +APEHLEIQT + Q++    CL YGGLFIGSRAAEVLGDYGAGPNHVLPTGGT +YTGGLSV  F+R+RTWMRID    +Q +  D++ LAR+EGL
Sbjct:    2 AETPVLRIVTPEEVPMLELDPVDPTALIQAKEIVDDVRKTGEAGLRKHALRLGDIPDATSKYVLDKAEMKAAFDSLPEDEQALLLRTRDRIQAFAQCQLDSVQSMETSIPGGRAGHTLSPMAVAGCYAPGGRYPLPSSVLMTAVTARTAGVKTVVVASPRPAPVTVAAAHVAGADLLLCIGGAQGIAALAFGTPCVPACDIIVGPGNKWVTAAKSLVQGRCAIDMLAGPSEVLAIADGSADADVLAADMLAQAEHDTDARPILVTPDAALAHRVNARIAARLAELPTRDTAAEACKKGFIVVCPDMDSAIAVSDSIAPEHLEIQTENAQEVA-DKCLDYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTGKYTGGLSVFNFVRIRTWMRIDAVGDAQQVVKDSVQLARLEGL 411
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: A0A2D4BYW7_PYTIN (Histidinol dehydrogenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYW7_PYTIN)

HSP 1 Score: 475 bits (1223), Expect = 1.420e-163
Identity = 261/408 (63.97%), Postives = 312/408 (76.47%), Query Frame = 1 
Query:   19 PVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            P+LK +   +V + + DPVDP A   A+ IV+DV+S G  +L   A RLGD+ +     ++  + +K AF  LP E++QVLQRT  R+  FA++QR ++ +    I GG+AG  VSPMS AGCYAPGGRYPLPSSV+MTAVTARVAGV  VVVASPRPA AT+AAA++S AD  L VGGAQ++AAMA+GVGGVPACDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LVIAD +A+ +T+AADLLAQAEHDT A PILVTTS  V++ VN  L ++LATLPT  TA  +   GFAV+C DMD  + VSDL+APEHLE+ TAD Q +      +YGGLFIG RAAEV GDYGAGPNHVLPTGGTA+YTGGLSV TFLR+RTWMRIDD + SQ L  D+  LARMEGL
Sbjct:    4 PLLKQIRPADVASFAYDPVDPKALADARXIVDDVRSNGEAALRQHAQRLGDLSSAXAPXLIPREQLKTAFQQLPAEEQQVLQRTAQRIRAFAQSQRDSIRNFEQKIEGGFAGQDVSPMSAAGCYAPGGRYPLPSSVLMTAVTARVAGVKTVVVASPRPAPATLAAAYLSDADYFLAVGGAQSIAAMAYGVGGVPACDIIVGPGNKWVTAAKSLVFGKCAIDMLAGPSECLVIADDSANADTIAADLLAQAEHDTAAVPILVTTSQRVIDAVNASLEKQLATLPTAATARTSAANGFAVLCPDMDTCISVSDLLAPEHLEVITADHQAVA-DRLSNYGGLFIGGRAAEVFGDYGAGPNHVLPTGGTAKYTGGLSVHTFLRIRTWMRIDDAEASQSLVRDSARLARMEGL 410
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: A0A6G0XYF7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYF7_9STRA)

HSP 1 Score: 475 bits (1222), Expect = 2.320e-163
Identity = 261/410 (63.66%), Postives = 318/410 (77.56%), Query Frame = 1 
Query:   25 LKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGV--GGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTA--DMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            L+V+   EV   + DPV+P+A EQA+ IVNDVK+ G  ++   A+RLGDI TE   +  D  AMK+AFD+LP  ++Q+L+RTK R+++FA+AQRA++   +  IPGG AG  VSPM VAGCYAPGGRYPLPSSV+MTAV+ARVAGV  VVVASPRPA+AT+AAA++S  D L+ VGGAQA+AA+A+GV   G+PACDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LV+AD  A     T+AADLLAQAEHDT A PILVT S ++++ VN  +  +L TLPT  TAS +V KGFAV+C  +D +V V++++A EH+EI TAD Q +      HYGGLFIGSRAAEVLGDYG GPNHVLPTGGTARYTGGLSV TFLR+RTWMRIDD   SQ    DA+ LAR+EGL
Sbjct:    6 LRVIKPSEVRAFAYDPVEPLALEQARAIVNDVKANGEAAVRQHAVRLGDIATESSPLTFDRDAMKQAFDSLPVGEQQLLERTKHRIQVFAEAQRASIQSFARDIPGGQAGQDVSPMQVAGCYAPGGRYPLPSSVLMTAVSARVAGVATVVVASPRPAVATLAAAYISNTDILVAVGGAQAIAALAYGVESAGIPACDIIVGPGNKWVTAAKSLVYGKCAIDMLAGPSECLVVADEAAIPHAATIAADLLAQAEHDTAAVPILVTDSKALLDAVNAEIIAQLTTLPTAPTASVSVAKGFAVLCPSLDSSVEVANILAAEHVEIMTADSQAVA-NRIEHYGGLFIGSRAAEVLGDYGVGPNHVLPTGGTARYTGGLSVHTFLRIRTWMRIDDGPASQEAVRDAVQLARIEGL 414
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: D0NQD1_PHYIT (Histidinol dehydrogenase, putative n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NQD1_PHYIT)

HSP 1 Score: 471 bits (1213), Expect = 1.510e-161
Identity = 259/406 (63.79%), Postives = 314/406 (77.34%), Query Frame = 1 
Query:   25 LKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            LK +A  +V   + DPVD  A + A VIVNDV+  G  +L   A RLGDI +ED  +++ +  + +AF+ LP+ ++ VLQRT  R+++FA+AQR ++++    I GG AG  VSPM+ AGCYAPGGRYPLPSSV+MTAVTARVAGV  VVVASPRPA AT+AAA++SGAD  L  GGAQA+AAMA+GVGG+P CDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LVIAD TAD  T+AADLLAQAEHDT A PILVTTS  +++ VN  L ++L TLP+  TAS +VK GFAV+C DM   V VSDL+APEHLE+ T++ +++      +YGGLFIG RAAEV GDYGAGPNHVLPTGGTA+YTGGLSV TFLR+RTWMRIDD + SQ L  D+  LARMEGL
Sbjct:   40 LKQIAPADVANFAYDPVDASALQDATVIVNDVRVKGENALKQHAARLGDIPSEDTPLLVSKAELAKAFEALPKNEQSVLQRTAQRIKVFAQAQRDSISNFQQTIEGGSAGQDVSPMNAAGCYAPGGRYPLPSSVLMTAVTARVAGVKTVVVASPRPAPATLAAAYLSGADYFLAAGGAQAIAAMAYGVGGIPPCDIIVGPGNKWVTAAKSLVFGKCAIDMLAGPSECLVIADETADAATIAADLLAQAEHDTAAVPILVTTSQKIIDAVNEQLTKQLETLPSAPTASVSVKNGFAVLCPDMATCVSVSDLLAPEHLEVITSNAREVA-DQVANYGGLFIGGRAAEVFGDYGAGPNHVLPTGGTAKYTGGLSVHTFLRIRTWMRIDDAQESQALVQDSALLARMEGL 444
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: K3WFD9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFD9_GLOUD)

HSP 1 Score: 469 bits (1206), Expect = 5.590e-161
Identity = 253/406 (62.32%), Postives = 317/406 (78.08%), Query Frame = 1 
Query:   25 LKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            LK +  D+V + + DPVD  A   A+ IV+DV++ G+ +L   A RLGDI + D  +++ ++ + +A+  LPE +++VL+RT  R+++FA++QRA++ +    I GG AG  VSPM+ AGCYAPGGRYPLPSSV+MTAVTARVAGV  VVV+SPRPALAT+AAA+++ AD  L VGGAQ++AAMA+GVGG+P CDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LVIAD +A+ +T+AADLLAQAEHDT A PILVTTS  V++ VN  +  +LATLPT  TA  +VK GFAV+C DMD  V VSD++APEHLE+ T + Q++      +YGGLFIG RAAEV GDYGAGPNHVLPTGGTA+YTGGLSV TFLR+RTWMRIDD + SQ L  D+  LARMEGL
Sbjct:    7 LKQITPDQVASFAYDPVDARALVDARTIVDDVRTNGLVALRQHAARLGDIASVDQPILISKQELYDAYLKLPENEQKVLERTTQRIKLFAQSQRASIQNFQQKIDGGIAGQDVSPMNAAGCYAPGGRYPLPSSVLMTAVTARVAGVKTVVVSSPRPALATLAAAYLAEADYFLAVGGAQSIAAMAYGVGGIPPCDIIVGPGNKWVTAAKSLVFGKCAIDMLAGPSECLVIADGSANPDTIAADLLAQAEHDTAAVPILVTTSQQVIDGVNKSIEAQLATLPTAATARVSVKNGFAVLCSDMDTCVSVSDVLAPEHLEVITENAQEVA-NKVANYGGLFIGGRAAEVFGDYGAGPNHVLPTGGTAKYTGGLSVHTFLRIRTWMRIDDAEASQSLVQDSALLARMEGL 411
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: A0A8K1C8W2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8W2_PYTOL)

HSP 1 Score: 468 bits (1205), Expect = 7.660e-161
Identity = 254/406 (62.56%), Postives = 314/406 (77.34%), Query Frame = 1 
Query:   25 LKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            LK +   +V + + DPVD  A   A+VIV+ V++ G+++L   A RLGDIK+ D+ ++L  + ++ AF+ LP +++ VLQRT  R+  FA++QR ++ +    I GG+AG  VSPMS AGCYAPGGRYPLPSSV+MTAVTARVAGV  VVVASPRPALAT+AAA++S AD  L VGGAQ++AAMA+GVGG+P CDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LVIAD  A  +T+AADLLAQAEHDT A PILVTTS  ++  VN  + ++L+TLPT DTA  ++  GFAV+C DMD  + VSDL+APEHLE+ T + Q++      +YGGLFIG RAAEV GDYGAGPNHVLPTGGTA+YTGGLSV TFLR+RTWMRIDD + SQ L  D+  LARMEGL
Sbjct:    6 LKQIEPSQVASFAYDPVDAKALGDARVIVDAVRTQGIEALRKHAARLGDIKSVDEPILLPREQLEAAFNQLPPQEQAVLQRTAQRIRAFAQSQRESIRNFEQKIEGGFAGQDVSPMSAAGCYAPGGRYPLPSSVLMTAVTARVAGVKTVVVASPRPALATLAAAYLSEADYFLAVGGAQSIAAMAYGVGGIPPCDIIVGPGNKWVTAAKSLVFGKCAIDMLAGPSECLVIADDAASPDTIAADLLAQAEHDTAAVPILVTTSQQIINNVNASIEKQLSTLPTGDTARVSMGNGFAVLCPDMDTCIQVSDLLAPEHLEVITQNHQEVA-NRVNNYGGLFIGGRAAEVFGDYGAGPNHVLPTGGTAKYTGGLSVHTFLRIRTWMRIDDAEASQALVKDSALLARMEGL 410
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: A0A5D6YBU9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBU9_9STRA)

HSP 1 Score: 468 bits (1204), Expect = 1.250e-160
Identity = 258/410 (62.93%), Postives = 318/410 (77.56%), Query Frame = 1 
Query:   13 DMPVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            D+P+ ++    EV + + DPVD  A   A+VIV+DV++ G+ +L   A RLGD+   +  +++    ++ AF  LP  ++QVL+RT  R++ FA+AQRA++ +    I GG+AG  VS MS AGCYAPGGRYPLPSSV+MTAVTARVAGV  VVVASPRPA AT+AAA++S AD  L VGGAQA+AAMAFGVGGVP CDI+VGPGN WVTAAK+LV G+CAIDMLAGPSE LVIAD++A ++T+AADLLAQAEHDT A PILVTTS +V++ VN  +R +L TLPT  TA  +VK GFAV+C DMD  V VSD++APEHLE+ TA+PQ++      +YGGLFIG RAAEV GDYGAGPNHVLPTGGTA+YTGGLSV TFLR+RTWMRIDD + SQ L  D+  LARMEGL
Sbjct:    7 DVPLTQISPA-EVASFAYDPVDARALADARVIVDDVRANGLTALRTHAARLGDLAAPEQPLLVSRDELRAAFLALPLAEQQVLERTAARIKRFAQAQRASIGNFQQQIDGGFAGQDVSAMSAAGCYAPGGRYPLPSSVLMTAVTARVAGVKTVVVASPRPAPATLAAAYLSDADYFLAVGGAQAIAAMAFGVGGVPPCDILVGPGNKWVTAAKALVFGKCAIDMLAGPSECLVIADASARLDTIAADLLAQAEHDTAAVPILVTTSQAVIDGVNAAIRTQLETLPTAATARVSVKNGFAVLCPDMDSCVAVSDVLAPEHLEVITANPQEVA-DKVRNYGGLFIGGRAAEVFGDYGAGPNHVLPTGGTAKYTGGLSVHTFLRIRTWMRIDDAEASQALVHDSALLARMEGL 414
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: H3HCE9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCE9_PHYRM)

HSP 1 Score: 466 bits (1199), Expect = 5.810e-160
Identity = 252/409 (61.61%), Postives = 317/409 (77.51%), Query Frame = 1 
Query:   16 MPVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            M  LK +   +V   + DPVD  A + A  IV+DV+  G+++L   A+RLGD+ ++   +++ +  +++AF+ LPE+ ++VLQRT  R+ +FA+AQR+++      I GG+AG  VSPM+ AGCYAPGGRYPLPSSV+MTAVTARVAGV  VVV+SPRPA AT+AAA+++GAD  L  GGAQ++AAMA+GVGGVPACDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LVIAD +AD  T+AADLLAQAEHDT A PILVTTS  +++ VN  L ++L TLP+  TAS +V+ GFAV+C DM   V VSD++APEHLEI T++ ++L      +YGGLF+G RAAEV GDYGAGPNHVLPTGGTA+YTGGLSV TFLR+RTWMRIDD + SQ L  D+  LARMEGL
Sbjct:    1 MAPLKQITPADVAGFAYDPVDAGALKDATAIVSDVRDNGVEALQKHAVRLGDVPSDSAPLLISQSELQKAFETLPEDQQKVLQRTAQRIRVFAQAQRSSIQTFQQQIDGGFAGQDVSPMNAAGCYAPGGRYPLPSSVLMTAVTARVAGVKTVVVSSPRPAPATLAAAYLAGADYFLAAGGAQSIAAMAYGVGGVPACDIIVGPGNKWVTAAKSLVFGKCAIDMLAGPSECLVIADESADPATIAADLLAQAEHDTAAVPILVTTSQKIIDAVNEQLTKQLETLPSAPTASVSVQNGFAVLCPDMASCVTVSDVLAPEHLEIITSNARELAEQVS-NYGGLFVGGRAAEVFGDYGAGPNHVLPTGGTAKYTGGLSVHTFLRIRTWMRIDDAQESQSLVQDSALLARMEGL 408
[Close]
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Match: A0A024UV84_9STRA (Histidinol dehydrogenase n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024UV84_9STRA)

HSP 1 Score: 464 bits (1194), Expect = 3.960e-159
Identity = 262/413 (63.44%), Postives = 317/413 (76.76%), Query Frame = 1 
Query:   16 MPVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRLGDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAALTDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVGKVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGG--VPACDIIVGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADME--TVAADLLAQAEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVVCKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVLGDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGL--DAIHLARMEGL 1236
            MP L+ +  +EV   + DPV+P+A EQA+ IVNDVKS G  ++   A+RLGD+ +   ++V     MK AFD LP  ++Q+L RTK R+E FA AQRA++   S  IPGG AG  VSPM VAGCYAPGGRYPLPSSV+MTA+TARVAGV  V+VASPRPA AT+AAA++S AD LL VGGAQAVAA+A+G+ G  V ACDIIVGPGN WVTAAKSLV G+CAIDMLAGPSE LV+AD+++ +   T+AADLLAQAEHDT A PILVT S ++++ VN  +  +LATLPT  TAS +V+KGFAV+C  +D  V V++++A EH+EI T+D Q +      HYGGLFIGSRAAEVLGDYG GPNHVLPTGGTARYTGGLSV TFLRVRTWMRIDD   SQ    DA+ LAR+EGL
Sbjct:    1 MPGLRTIRPEEVRAFAYDPVEPLALEQARAIVNDVKSRGEPAVREHAVRLGDLPSTSASLVYTRDEMKAAFDALPVSEQQLLTRTKQRIEAFAIAQRASIQSFSREIPGGQAGQDVSPMQVAGCYAPGGRYPLPSSVLMTALTARVAGVSTVIVASPRPAPATLAAAYISNADILLAVGGAQAVAALAYGLDGTGVSACDIIVGPGNKWVTAAKSLVYGKCAIDMLAGPSECLVVADASSVVHAATIAADLLAQAEHDTAAVPILVTDSTALLDAVNASIIAQLATLPTAPTASVSVEKGFAVLCPSLDVCVDVANVLAAEHVEIMTSDSQAVA-DRIQHYGGLFIGSRAAEVLGDYGVGPNHVLPTGGTARYTGGLSVHTFLRVRTWMRIDDGALSQEAVADAVQLARVEGL 412
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1319.2363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2B6_ECTSI1.610e-23284.06Histidinol dehydrogenase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YMH6_9STRA2.210e-17565.69Histidinol dehydrogenase n=1 Tax=Tribonema minus T... [more]
A0A2D4BYW7_PYTIN1.420e-16363.97Histidinol dehydrogenase n=1 Tax=Pythium insidiosu... [more]
A0A6G0XYF7_9STRA2.320e-16363.66Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
D0NQD1_PHYIT1.510e-16163.79Histidinol dehydrogenase, putative n=15 Tax=Perono... [more]
K3WFD9_GLOUD5.590e-16162.32Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C8W2_PYTOL7.660e-16162.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YBU9_9STRA1.250e-16062.93Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3HCE9_PHYRM5.810e-16061.61Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A024UV84_9STRA3.960e-15963.44Histidinol dehydrogenase n=11 Tax=Aphanomyces TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1319contigF-serratus_M_contig1319:9296..19944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score645.6
Seed ortholog evalue1.6e-182
Seed eggNOG ortholog2880.D7G2B6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.histidinol dehydrogenase activity
EggNOG OGsCOG0141@1,KOG2697@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size1271
Cds size1254
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1319.2363.1prot_F-serratus_M_contig1319.2363.1Fucus serratus malepolypeptideF-serratus_M_contig1319 9296..19929 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929278.6272392-CDS-F-serratus_M_contig1319:9295..93611622929278.6272392-CDS-F-serratus_M_contig1319:9295..9361Fucus serratus maleCDSF-serratus_M_contig1319 9296..9361 -
1690962781.17094-CDS-F-serratus_M_contig1319:9295..93611690962781.17094-CDS-F-serratus_M_contig1319:9295..9361Fucus serratus maleCDSF-serratus_M_contig1319 9296..9361 -
1622929278.6549351-CDS-F-serratus_M_contig1319:9656..98461622929278.6549351-CDS-F-serratus_M_contig1319:9656..9846Fucus serratus maleCDSF-serratus_M_contig1319 9657..9846 -
1690962781.1826017-CDS-F-serratus_M_contig1319:9656..98461690962781.1826017-CDS-F-serratus_M_contig1319:9656..9846Fucus serratus maleCDSF-serratus_M_contig1319 9657..9846 -
1622929278.6849713-CDS-F-serratus_M_contig1319:10218..103101622929278.6849713-CDS-F-serratus_M_contig1319:10218..10310Fucus serratus maleCDSF-serratus_M_contig1319 10219..10310 -
1690962781.1926916-CDS-F-serratus_M_contig1319:10218..103101690962781.1926916-CDS-F-serratus_M_contig1319:10218..10310Fucus serratus maleCDSF-serratus_M_contig1319 10219..10310 -
1622929278.696834-CDS-F-serratus_M_contig1319:10898..110541622929278.696834-CDS-F-serratus_M_contig1319:10898..11054Fucus serratus maleCDSF-serratus_M_contig1319 10899..11054 -
1690962781.2016914-CDS-F-serratus_M_contig1319:10898..110541690962781.2016914-CDS-F-serratus_M_contig1319:10898..11054Fucus serratus maleCDSF-serratus_M_contig1319 10899..11054 -
1622929278.7147677-CDS-F-serratus_M_contig1319:11987..120841622929278.7147677-CDS-F-serratus_M_contig1319:11987..12084Fucus serratus maleCDSF-serratus_M_contig1319 11988..12084 -
1690962781.2096925-CDS-F-serratus_M_contig1319:11987..120841690962781.2096925-CDS-F-serratus_M_contig1319:11987..12084Fucus serratus maleCDSF-serratus_M_contig1319 11988..12084 -
1622929278.7303607-CDS-F-serratus_M_contig1319:12255..123391622929278.7303607-CDS-F-serratus_M_contig1319:12255..12339Fucus serratus maleCDSF-serratus_M_contig1319 12256..12339 -
1690962781.2173002-CDS-F-serratus_M_contig1319:12255..123391690962781.2173002-CDS-F-serratus_M_contig1319:12255..12339Fucus serratus maleCDSF-serratus_M_contig1319 12256..12339 -
1622929278.7463021-CDS-F-serratus_M_contig1319:12651..129621622929278.7463021-CDS-F-serratus_M_contig1319:12651..12962Fucus serratus maleCDSF-serratus_M_contig1319 12652..12962 -
1690962781.226905-CDS-F-serratus_M_contig1319:12651..129621690962781.226905-CDS-F-serratus_M_contig1319:12651..12962Fucus serratus maleCDSF-serratus_M_contig1319 12652..12962 -
1622929278.76821-CDS-F-serratus_M_contig1319:13272..134431622929278.76821-CDS-F-serratus_M_contig1319:13272..13443Fucus serratus maleCDSF-serratus_M_contig1319 13273..13443 -
1690962781.237831-CDS-F-serratus_M_contig1319:13272..134431690962781.237831-CDS-F-serratus_M_contig1319:13272..13443Fucus serratus maleCDSF-serratus_M_contig1319 13273..13443 -
1622929278.7816577-CDS-F-serratus_M_contig1319:19842..199291622929278.7816577-CDS-F-serratus_M_contig1319:19842..19929Fucus serratus maleCDSF-serratus_M_contig1319 19843..19929 -
1690962781.2454097-CDS-F-serratus_M_contig1319:19842..199291690962781.2454097-CDS-F-serratus_M_contig1319:19842..19929Fucus serratus maleCDSF-serratus_M_contig1319 19843..19929 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929278.7956097-UTR-F-serratus_M_contig1319:19929..199441622929278.7956097-UTR-F-serratus_M_contig1319:19929..19944Fucus serratus maleUTRF-serratus_M_contig1319 19930..19944 -
1690962781.2546823-UTR-F-serratus_M_contig1319:19929..199441690962781.2546823-UTR-F-serratus_M_contig1319:19929..19944Fucus serratus maleUTRF-serratus_M_contig1319 19930..19944 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1319.2363.1

>prot_F-serratus_M_contig1319.2363.1 ID=prot_F-serratus_M_contig1319.2363.1|Name=mRNA_F-serratus_M_contig1319.2363.1|organism=Fucus serratus male|type=polypeptide|length=418bp
MPVLKVLAVDEVPTVSSDPVDPMAREQAQVIVNDVKSGGMKSLIAQALRL
GDIKTEDDAVVLDEKAMKEAFDNLPEEDKQVLQRTKDRVEIFAKAQRAAL
TDMSNPIPGGYAGHTVSPMSVAGCYAPGGRYPLPSSVIMTAVTARVAGVG
KVVVASPRPALATIAAAHVSGADALLCVGGAQAVAAMAFGVGGVPACDII
VGPGNNWVTAAKSLVSGRCAIDMLAGPSEVLVIADSTADMETVAADLLAQ
AEHDTEARPILVTTSASVVEKVNTCLRRRLATLPTRDTASEAVKKGFAVV
CKDMDEAVVVSDLVAPEHLEIQTADPQKLRIGACLHYGGLFIGSRAAEVL
GDYGAGPNHVLPTGGTARYTGGLSVMTFLRVRTWMRIDDPKPSQGLDAIH
LARMEGLRVTPELRSADL
back to top

mRNA from alignment at F-serratus_M_contig1319:9296..19944-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1319.2363.1 ID=mRNA_F-serratus_M_contig1319.2363.1|Name=mRNA_F-serratus_M_contig1319.2363.1|organism=Fucus serratus male|type=mRNA|length=10649bp|location=Sequence derived from alignment at F-serratus_M_contig1319:9296..19944- (Fucus serratus male)
GCCTCCGAGGCCGACATGCCAGTTCTGAAGGTCCTCGCGGTTGACGAGGT
TCCTACCGTGAGCTCCGACCCTGTTGATCCTATGGCTCGCGAGCAAGCGC
AGGTGGGTCATTCATATCAAGATTTAAAGATGCCGGAATACTTGTTCTGT
TTGTACCTCCTTTTTCTTTCTTCCGCCGACTGCTGCTACATATGTATACC
TATTCGTATATACCACTTGAGCACTATAGCAGTATGGACATACCTGGTAG
TATGAAATGTCATCACATACACAGTACCACATGCTGTGCATTGGGGGGCC
CTTTATTCATTGGGGGGCCCCACTCTCATATATTAAAAATAGAATGGGGG
GGAATTCGGGGATGAAAACGTACGTATCGTTTGGTCCCCAGATTTCCGCC
CTGTGAACGCCTTTCGAAGGTAAAAAAGTAAAAATGAGAACAAATGAAAA
ACACAAAAGTAAAATAACCCTAACCCTAACCCTAACCCTAACCCTAACCC
TAACCCTAACCCTAACCCAAACCTTAACCCTAATAGCAAAAAATAAATAA
ATAAATAAAAAATGTATATAGCGGGGAGGGACCCGCAGAGTAGGGTGGGA
CCCCCGAAGAGGGGTGGGCCCTCCAATGCACTACAACCACATTTATCGAT
TGTCATTATTCAAAGCAGAGTACCAAAGCAACTGCCGGAGAGTCAGTCCT
CGCGACGCCGCTTTGGGGCATGCTTTATGCTGACGATGCTGGGGTCGTCT
CGCAATCGCCCGAGCAGCTGAGAAATATATTGGGGGTGGTCGTGGTCGTG
TGCGCGGAGTTTGGCCTCACCGTATCGGAGGCCAAGACTGAGATCATGTG
TTTACGTGCGAAGGGGATGCCTGAGTCTACCGCCACATTCAGCGCAGAGG
CAGCGGGCCAGGTGTACAGCCAGACGAACGAGTTTGTTTACCTCGGGGGA
AACGTCAACCACAATGCTGACCTATCCATCGAGATCGACCGGCGCATACG
CAACGCATGGTGCAGCTTCCGGAAGTACACACTCGAACTGTACGACCGAC
CGAGCGCTCCCCTCGAGCTCAAAATCCGGATGCGAAGAGCCGAGGTATTC
GAGACAAAGCTGTGCGGCTGCGTCACGTGGAGCCCGCGCGCGTGCCAATA
CGATACGCTTCGCCGAGCCCACCTCAGGTTCTTGACTCGCTGCATCGGTT
GGCGAAAGCACAATCGCGCCGACCACCCGATTTCTTATCTAGACACGCTT
ATCAAAACGGGAAGTGAGAGCATCGAGGCGACTTTAGGCAGGAGGCGGAT
CTTGATTGCTTTTTTTGTGGCGCGCATGGAGGATACGAGACTGCCGAAGT
ACGTGATGTTCGGAGAATTGGCGGGGGCACGGGCTGTCAGGGGGGGCCAG
GAAAAAAGAATGGATGGGGTGCTTCCTGGACGACCTCAGAGCTGTCGGCA
TCAATGCCGACTAGTGGACGACTGCAGCCCAGGACGAGGGGTAATGTCGC
AGAACGGCGGAATAAGTGGCGAAACATTTCATGGCGAAATGGATCGCTGC
AGAGAAAGCCAAGGCTGGACTACGTCATGCGGTGGTATGCCCGAACGTGA
CGGGAAGGACGAAGGAGAGGATAGTCCACAGCAAACGGGTTCGTGCTGGT
TCGCTCGCCCTTGTTGACTAGCCACAGGTGGCGCTAACTTGTATCCTCCG
GGCGTTTGGTTTGCAGATGTGATGACGTCTTTCTCTGGCGTTAGATTTGT
TTTGTTTTGCTTCCTTTTCGTCTTTATGCTCTCGTTGAAGCCGCGGCTCT
ACGTTCGATCGTCCTTCGATATGCAGGCGCCCCGATAGCCACACGTGTTT
TGTTGTTGCTGTTGTTGTTGTTGTTGTTCATTTGGTGATGTCGCTTTTTC
CGAGTATTTTTTGTACCATTGCCGCCTTCTCTTTGTATGGAGAGTACGTC
GTATGTTCTTTGCTTCCGAATGGTGTTTTTGTACCTTGTGACCACGGGCT
GGATTTTTGACATCATATTATGCGAGAATTCAATCAATCAATTGATCAAA
TGTGCATGGTCGCCCCCCGGTAGCTCAGTTGGTAACCTCGTAACCTTGCT
GACACGTTGGGACGTGAGTTCGAATCCCGGTAACAGGGATTTTTCCTCAC
TAAAAAAAAAAAAAAAAAAAAAGCCCAGCAAGTGGAGAACAATTAAATCG
ATAGTACACAAAATTCGACTTCACGGTCAACGAGGAAAAGGAACGGCTGA
ATCCTTCTCGCGAGAAAAATAAAGGCGTACACCGCAGAAGGAAGGTGGAT
GAGAAATTCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTAGTACATCCA
ATGAACTTGAGGTCCAGAATAAATGGGAAGAAAACACACACACATATAGG
AAGAGTGTGGATCAATCATGTATGGTCACACATATAGCAAGAGTATGGAT
CAACCTGGTGAGGTTGCCATATGGTGCGCCGGTACTTTCAACATGCCCAC
TTCATATCATTAGTGGGTGTGGGAAAGAGAGGCGCATATTAATTAGTCCA
GGGTGACCTGCCAAGGCAGCATCGTTTGAAACTACCTTGAGGTTTACTGG
TCCTGTGCCGGCGCACTCTCGGCAGTGAACGCCATCGGTACGCAAATGCG
CGACCCAATAAACTCGGGACTGACTCGATAGCGTATCGCGGTTTAAATAT
AAAAATGAACGCCGCCGCAAAACTCGGGAGGAATCCCGTAAGTAAGCACC
ATATCCAGCCTGAGTATGGATATGAGCAGGCTGACGCGGGACGGGACTGC
CCAGCCCGTCTCGCGAGACAAAATTCTCGGGCGCGAACGGGGACAGGGAA
ATATTCATTTTCCCTGTTCAGCTGGCTACGAGCAGGATTGGCAACCATAC
CCGGTGGATCCATACTCTTGCTATAGTCTATGTGATGACCATACATACAT
ACATGGATCAACCGGGTACGGTTGCCAATCCTGCTCATGGTCAGCTAAAC
AGGGAAACATATTTTTTCCCCCCTGTCCCCGTTCGCGCCTGATAAAATGA
TCATGCGAGGCAAGCTCGGCCGTCCCGTCCCGTGTCAGCCTGCCCATTTT
CCACAATCAGGCTGAATATACGTATGTATAGCCATCGCTTATACATATAG
CCTAACCCGATTGATCCTTACCCTTGCTGTATGTGATGACCATACATACA
TACATATATATAGCGGAGTATAGGCCTTGCGATGAACAGCTGAACAAGGA
TTTGTTTTTTCCCCCTGTCCCCGTTGGCGCCTCAGGATTTGGTCTCGCGA
GACAGGTTTGGCCGTTCCGTCCCGCGCCAGCCTGTTCATTCTCCGCACTT
GAGCAGAATCTGGTGCTTACTTATGGAATCCCCTTTCCGCGACGGCGTCC
ATTTTCACCAGGGCTGGCTCTTCACAGTACACTTTTCTTATTCGGCACAA
AGAGTTATTGTTTCCAAGAGCCACGAGTTCTAATGGTTCGTGGTCAATGT
TTTAACATTATCGCGGTTGAAAATGGACGGTTCCTGAGAGCCTCAGTTTG
CTGTGGTCCGGTTTACGGTTCCGAGTCAAGTCTGCGGTTTGGTTGCCGTC
CGGTTTACGGTTTCAGGTTGAGTCTGCGGTTTGGTTGCTGTCCGTTTGCA
CTCAACAACAGATGTCTTCCCGAACTGCGACATCTCCCATACCTTCAACT
TTATGTGTGTATTCGCCGCTTCGTACCCACTCTTGTGTATTTTGACGTCG
ACTGTCTCCCCAGCAGCCGTCTCTTGTGCCGATTTCACATCCTGGACGCA
TCGGCTGCGTCTTTCTTGCTGCGCCGCAATAACGGCGTTGTATTTCTGTA
CTTCAGGTAGGCATCCCTGGATTAACTTCAGAAATGTCATCTGCTCCATC
TGGAATGGACCCATGCTTGCCCGCAAGGTGCCAATCAAAACAGACAGCAA
AGAGAAATTGCGTTCCGCTTGGCACCCGGTCGCCTCAACCCCACGGTAAA
GACGAGCAAGGAATGCTAGGTGCACAGATCCGGAGGCGCCACAAGCTCGT
CCGTGCCCTGAGCCAGCGCCAGCTCGCTCTTGCCGAGCCGAAAATCTGGC
AGCAAGAAGCCGCACACGTCTGCCTCGACGTGTTACCCTCGATAGTTTGT
TAGGTCATGTTTAAGGGTGACGTGATGTGTCACAGCTTGCCCCTCCTGTG
AATCACTTCGATGTCCAGCTGCAGTCAGTCGGGCTAGGCGTCTTTGCTCC
ATTACTAAGGACATCCGCGGCAAAGTTGCGACCGGATCAACCTCCAAGCT
GATGCAGGGGCCGGAGCTGGGGCTGCTATAGGGGCTGGTGTCCTGGTAAA
ATACTGCGCGACGTTTCCGATGAAGCGATGCCCGAGCTCTTCGGTGTCCG
AAATTGCGATCGTCTGAAGCACATTGCCACCGCCAATACAATTGTCCTCG
GACAGAATTTTTCCTCGTCGGATCGAGAAAGACGATGATGCGCTCAACAA
GGTTAACACACTGTTGTAGTTTCCCACGCTTTTAGACCTCCACCGTACAC
CGCACGGAGCATTTCCCAATGGGTGGTAAGAATTGCTGCATCACTTTCCA
TATCCACCCATGCGTTCATCTTTCTTTTCCTCGTCGGGGGATCTACAATC
GCCACCGTCCGTAGCGAGGTTCGTTTTTTCTGTTTGCGTGCTCCTGAACG
AAGATCATCGCACATCGAATTGCTGGCCTTGCCACGCCCTTCCTTATCCG
CGCAAGGTGCAGGGGGATCTCTGCTTTGGCTAATGTTCGTGGCTCTCTCC
GCATACCACGCAGCTCAATACCATGTCTCTAACTTGTGAGGCAGCACTTT
GCTTAGTTTCACCTTTTATTTCATTTGATTGCTGTCCCTTTTCCCCTCCT
TCTGTGTTTTTCTTTTGCTGAGTGTCGCATTGGTTGTCCTTGCTCTTGTC
TTCCTGCCTGGGTTGTATTCCGCTGCTGATAGGACTGCCTTTCTTGTGCA
GCCTGCTGAGGAGGAGGATGTTTTTGTTGCGCTACGCGCCTTACGTGGTA
GTATTTCGTTTGTTTCTTCTGCTTTTGCGTTTGTTTGTGTTTGCGTTTTG
TCTCTCCTGTGTCTCCTCCTGGCGACGATTTCCTTTGCTGTCTGCCTTCC
CTTGTTCTTTTTTGTCCGACCGCGTTCCCGGTTTGAGCCTATCTTGTGGC
CGCGGCTGGGTTCGTAACGGATCAGTTAACGTGAAATAAACAACAACAAC
CTACTGATTTCATAGAACGTTCCGTCCTCTACAGTATATACTACTGCTTT
ATTGATAAAATGTTATGATACTACTAAGCATGTACCGAAGGGTTTCTATT
ATACATCACACAGTGCTGACGTGCGGACGTCCTTTCGCATTTTAACTCGT
ATAATGTACGTTGCTGCACGTATCGCGGTCCCACCGAATTACGGGACTGT
GTTACCGCGGTTAGGAGACTCCCCGATTCTTAAACGGGACGGTTTACGGT
TATCACGTTTATGTTCTCGGTTCGGTTCAGGATTTGTGCCGGATCTTTGT
TAAGTCTTGCGGTTATTTATCGTTAATGGTGCACGGTTATGGTTCTGTTA
AAATCTCGGTTTTGCTCTGCGGCTTTGAAACCGTGAAGGATCCTTAATTT
TGACGGTTAACCGCCATCGATTCAGTCCCGAGTTTATCAGGTCGCGCAAT
TGCGTACCGATGGCGGCCACTGGCGAGAGCCCGCTGGCACAGGGCCAGTA
GTCCTCAGGGTAGTTTCAAACGGTGCTGCCTTTTCGGGTATCACCGTGGA
CCAATCAATGTGCGCCTCTACTCAGACAGTTCGAGTACGAGTAGTCCAGA
ACTCCCTATTTTCATTTGCAGTCATTTTTAGCATGACGAAGTCAACACAT
TAGCGGTCCCGCGGCGCATTGCTGAGAGTAGAGAGATCCCTTTCTTACGA
TGCCTTGTCATTATCGATGCGCACTACGGGCACCCCATCATTAGCATAGC
CATTACGATCTATTGATAGAGCTATCCGTGGAGCAAAATGTTTAACGCGG
AGATTTGTTGGCGCTTCGAAAGGGCAAGAGTACAATGTACTCTTAGAGCT
ATATAGGTAGGCATGCCAAATGGGATACAGGCGCTTTGTCCCGAAAACTG
TTTTTTAATCGAGAGGTAGCGACGGGTAAGGTCCTTAATTCTGTATTCGA
GACGAGTGTACTGCTGTGCTTGCCCCTGTTGTAATTACTATAGGGGAATT
TTACTTTACACGAAGGTGGGTCACAGCCTGCCAGGCTTCCCAAATTACAA
ATGAACCCGCACGCTTTTTATTTTCTTTCTCCACCGCCTTCAAGTTTTAC
ATTTCCTGTACCACGGGATCTCCATTAGCCCCTAACGAGCATCACGGCGA
CGGCCAACCAGTAAGTACACGCGCCTATTCTATTCCACAAACTTTTAACC
TTTTGAAATGCGCCAGAAACTTGTGCATTCCGTATGCGCGCAACCGCGTA
GGTGATTGTGAACGACGTCAAAAGCGGAGGCATGAAGAGCCTGATCGCGC
AAGCCTTGCGCCTTGGAGACATCAAGACGGAGGACGATGCCGTGGTTCTT
GACGAGAAAGCCATGAAGGAAGCGTTCGACAACCTACCCGAGGAGGACAA
GCAAGTCCTCCAGCGAACCAAGGTTCGCTGGCGTGGTCGCCGCTCTTACG
CTGTAGGCCTGGGAGCTGCATGCGTCGTCATGAAATATACGTCTTCCTTT
TTACTCCCTACTACGGGCTGGTAGGGTTGGAGGAAGCTGGGCGGGACGCT
TCCATGTTGTGGGAAAATGTTGACGTCCTGAGTGATTGGTGGTTGCAACT
GCCCTCGTGCCGCAGATGTTGGCGACGTTGTTGACCGACCCACTAGGCTG
TATCCATGAAATTGTGACGCGATGAAGCTTTTTGTACATGCTCGCCTCGA
AAACCCCGCCCCTCCGAAAACGGAAAGAGCAGGACCGTGTCGAGATTTTC
GCCAAGGCGCAACGCGCGGCTCTTACAGACATGTCGAATCCCATCCCTGG
AGGTTACGCCGGTCACACGGTCAGCCCAATGTCGGTAGCGGGCTGCTACG
CCCCAGGGGGTCGCTACCCGCTGCCTTCGTCCGTCATCATGACCGCAGTA
ACCGCACGGGTGGCGGGAGTGGGGAAGGTCGTGGTGGCGTCCCCGCGGCC
GGCGTTGGCGACGATTGCTGCGGCTCACGTTTCGGGCGCCGATGCGCTGT
TGTGCGTGGGAGGGGCACAGGCTGTAGCCGCCATGGCGTTCGGGTAAGTC
TATCCGCGGCCGCAGGGCTGTGATGTGCCGTGTGTGCGTGTTTTTGCTCC
CCTCGGAACGACAAGCCTTTGTAAGGCATGGACAAGCTCTCCATCCCGGT
ATATACGGTACAGGGTAAAAACCCGCTAGCACTTGATCAATTTGCGCGAT
GTCCCGAGTCCACCGTTGGCAGGCTCGCTGTGGAATCTACAGTCCGTTTT
TATTTTTTATTTTTGGACATTGGTTTGACGATACTAAGTCCAACCGACCG
GCCGACGAACGCTCCTCGATGTCACCTTGTCCGGGCGCTGGTGTCTCGAT
CTCAGGGTGGGAGGCGTTCCAGCGTGCGATATTATTGTGGGCCCGGGCAA
CAACTGGGTTACCGCTGCGAAGTCCTTGGTGTCTGGAAGGTGAGAGGGAG
GTGGTCATAATTTCTCTTGTCGGCGTCCTGCACTAGCCTACAACCATGTT
CTGCTGCTGTATCTCCGCTTCTCTCAGTGCGGTCAAACGTTCCACACCTT
CCTATTTTTTTTTTCCCGCCCGCCCGGCTGTTTGACCTCTGTGCCGTTTC
GTCGAAACAGGTGCGCCATCGACATGCTCGCGGGGCCCAGCGAAGTCTTG
GTGATCGCCGACTCCACGGCGGACATGGAGACCGTGGCCGCAGATCTTCT
CGCTCAGGTGCTGAACTCGACGTGAAATTATCCGTTCCAGCCGACCTCGA
TAGCTATCTCGAGCTCGCAAGGTTCTATGCTCACGTCTACTCTATACTTG
TATCGTATAGTATAATGATGTATCTCCCCGACAATTTACGGTTGCCCCAT
GTCTTGTTATGTTCGGAGGCTCTTGGCGATTAATAATGCCATTTAGTGTC
TTCGTATTTACAGCTTATGTAATACCAGTAGTAATTTATCACTACTATGT
TTGATGATGTACTACATTGTTTTGGTTTTATGCTGGTTTTCTGGTGTTCC
TGCATGGCGACTAATGTAAGTGTAATACAGTATAACGATGGGCTTCTCCC
CGACATTATACTGTTGACCCAATGTTACCACCATAGGGGAACAGAGGTTT
TGTATTTACAGCCTTTGATCCCACCTAAATGTTTTGTTATGTTCAAATAC
TATGTAGTGTTTCCGTCCTTATAGCCTAGGTAACAAGTATATTATCACTA
CCATGTTTGATGAGTTACTACATTGTTTTTGTTTGTTGCTGTTTTTCTGG
TGTCCCTGCATGGCGATTAATTTAATTGTACAATTTAACGGTGGGCCTAT
CCCCGACATTATACTGTTGACCCAATGTTACTACCATAAAGGAACCCGTT
TAAATGCCATGAAGAGGTTTTGTATTTGCAGCCTTTGATCCCATCTAAAC
GTTTTGACATTTTTTCTTCTGACTGGAGGATGCTCAGAAGGTATAGGCGG
GTTCTGGTTTTTCTTTCAAAATTACCAAATGTCTTAACGCGGCGGCTTTC
CCCGTCTACAAACGTTGGGCTCGAAGACGCGCGAGTTTGTCCTCCCACGA
CCTGCTACCGGTCGTTTGTGTCAACCAGTTCTTTGGTTGCCATCGATGAC
CCTATATTTTCCCCTATGATTTTGCTTGGCCTTGCTGTAGGCGGAGCATG
ACACGGAGGCGAGACCCATCCTGGTTACCACCAGTGCCTCCGTGGTCGAA
AAGGTGAATACCTGCCTCCGCAGGAGGCTGGCTACGCTTCCCACGAGAGA
CACCGCGTCGGAGGCGGTCAAGAAGGGGTTTGCCGTCGTCTGCAAGGTGA
GCTACTAGAATGTCGCGCGTTGTCTGCCGCGGATTGCGACGTTTTATTTT
AACTGGCACATACGGCTGTGGTGGCGCCAAACTGTCCATTACTGCTCCCA
GCGGATATAGATCAGTTTGCTCTATTATATATGTATATATTATAGTATGT
ACGAAGTTGAGAGTTTTGCGGTCTGGGGAAACGCTTGGGCTAGTTATCGC
CGGGGGGAGATTTTGAGGGAGTCGTGGGTATATCATTTCCGACTACTTTG
CCTTGTCGGAGGGACCTCCGAAGGTCCTTTGCTTCAGACCTCGTGCTGAT
TGGTTCTGTTTTTTTTCTGTGTCTGAAGCTGACGTTATAGATTCCGCCTC
CCAAGAGCGAGTATCAATCTCCGCGCCTCCCGGGCTCTCCCGCGCCCAGA
TACCCTTTAGTTGGGTGCCGCTGCACCTGCAACATCCGCCACGCGCCTCG
CATCAAATGGCGCCAACAATCTTGCGATTCACCGTTCTCTTGCCTCCTTG
TCACCATTTTCGTTTCCCGTCGGTTTCCCGTCGGTTGTCGGTTGTCGGTT
GTCGGTTGTCGGTTGTCGGTTGTCTACTGTCTAGGATATGGACGAGGCGG
TCGTCGTTAGCGACCTTGTGGCACCCGAGCACTTGGAAATTCAGACCGCG
GACCCACAAAAGTTGCGAATAGGTGCGTCTGTGTGGTTAGTGCCCGTTTT
ACCCATCGCGTGGTTTGTAGAAGGAAAAGTTGAGTGGGCATGGTATACTT
ACTTCATGCAACATCCTTAGTCTCGTGGCGGTGTAATCATTCATACCAGT
ACATCATATTGTTCATTTCCACACATGAGAATATTTGGACTATGGTGTAC
GATCACATGCTTTCAGGCATACTCTCTGGTGTAAAAATCCGGAATTTGTC
TAGTTTTTGTTTCTGTTATACCAATGTGAACGTGTCGACTTTCCTCTCTT
TATGAAGTCTTATGGCAAAGAGCGATTCCTTAGGTATTCCCTTTTATTTT
CATACTCTAGTGAATGGAAGTGCTCTCCATTCTCTTGCTCTGTGCCAGCT
GCCTGCACTACGGAGGGCTCTTTATCGGGAGCCGTGCCGCCGAGGTGTTG
GGAGACTACGGCGCGGGTCCTAACCATGTCCTTCCGACGGGAGGCACTGC
GAGGTACACGGGCGGCCTGTCGGTAATGACGTTCCTGCGCGTGAGAACAT
GGATGCGGATCGACGACCCGAAGCCGTCGCAGGGACTGGTCAGGTGAGGT
ATCAGGGTAGAGGTGAGGGCCATTCGTCCCAACCACAAAAAAACGTGTTC
AGGACGAGATCGTGGGTTTGGTTCCCTCTCCACTACCCCGCGAGCCCGCA
CATATTTACCAGCGCGACATGCGTGGAGCGACATGGCCAAAAGAGGAGCT
CATCGTTACTTGGTTTCTCGCGCTGTCATTGTTTGGAGGTCAATTTGCTA
TAGAATATGACCCCACGCGGGCGCTCTGTGGCTCCCTCGTTGCCACGCCG
TCTGCATGGACTTGTTTCCGGTGCATTCTCTAGGACGCTATCCACCTGGC
GCGGATGGAAGGTTTGAGGGTCACGCCCGAGCTGCGGAGTGCAGACTTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1319:9296..19944-

>mRNA_F-serratus_M_contig1319.2363.1 ID=mRNA_F-serratus_M_contig1319.2363.1|Name=mRNA_F-serratus_M_contig1319.2363.1|organism=Fucus serratus male|type=CDS|length=2508bp|location=Sequence derived from alignment at F-serratus_M_contig1319:9296..19944- (Fucus serratus male)
ATGCCAGTTCTGAAGGTCCTCGCGGTTGACGAGGTTCCTACCGTGAGCTC
CGACCCTGTTGATCCTATGGCTCGCGAGCAAGCGCAGATGCCAGTTCTGA
AGGTCCTCGCGGTTGACGAGGTTCCTACCGTGAGCTCCGACCCTGTTGAT
CCTATGGCTCGCGAGCAAGCGCAGGTGATTGTGAACGACGTCAAAAGCGG
AGGCATGAAGAGCCTGATCGCGCAAGCCTTGCGCCTTGGAGACATCAAGA
CGGAGGACGATGCCGTGGTTCTTGACGAGAAAGCCATGAAGGAAGCGTTC
GACAACCTACCCGAGGAGGACAAGCAAGTCCTCCAGCGAACCAAGGTGAT
TGTGAACGACGTCAAAAGCGGAGGCATGAAGAGCCTGATCGCGCAAGCCT
TGCGCCTTGGAGACATCAAGACGGAGGACGATGCCGTGGTTCTTGACGAG
AAAGCCATGAAGGAAGCGTTCGACAACCTACCCGAGGAGGACAAGCAAGT
CCTCCAGCGAACCAAGGACCGTGTCGAGATTTTCGCCAAGGCGCAACGCG
CGGCTCTTACAGACATGTCGAATCCCATCCCTGGAGGTTACGCCGGTCAC
ACGGTCAGCCCAATGTCGGTAGCGGGCTGCTACGCCCCAGGGGGTCGCTA
CCCGCTGCCTTCGTCCGTCATCATGACCGCAGTAACCGCACGGGTGGCGG
GAGTGGGGAAGGTCGTGGTGGCGTCCCCGCGGCCGGCGTTGGCGACGATT
GCTGCGGCTCACGTTTCGGGCGCCGATGCGCTGTTGTGCGTGGGAGGGGC
ACAGGCTGTAGCCGCCATGGCGTTCGGGACCGTGTCGAGATTTTCGCCAA
GGCGCAACGCGCGGCTCTTACAGACATGTCGAATCCCATCCCTGGAGGTT
ACGCCGGTCACACGGTCAGCCCAATGTCGGTAGCGGGCTGCTACGCCCCA
GGGGGTCGCTACCCGCTGCCTTCGTCCGTCATCATGACCGCAGTAACCGC
ACGGGTGGCGGGAGTGGGGAAGGTCGTGGTGGCGTCCCCGCGGCCGGCGT
TGGCGACGATTGCTGCGGCTCACGTTTCGGGCGCCGATGCGCTGTTGTGC
GTGGGAGGGGCACAGGCTGTAGCCGCCATGGCGTTCGGGGTGGGAGGCGT
TCCAGCGTGCGATATTATTGTGGGCCCGGGCAACAACTGGGTTACCGCTG
CGAAGTCCTTGGTGTCTGGAAGGGTGGGAGGCGTTCCAGCGTGCGATATT
ATTGTGGGCCCGGGCAACAACTGGGTTACCGCTGCGAAGTCCTTGGTGTC
TGGAAGGTGCGCCATCGACATGCTCGCGGGGCCCAGCGAAGTCTTGGTGA
TCGCCGACTCCACGGCGGACATGGAGACCGTGGCCGCAGATCTTCTCGCT
CAGGTGCGCCATCGACATGCTCGCGGGGCCCAGCGAAGTCTTGGTGATCG
CCGACTCCACGGCGGACATGGAGACCGTGGCCGCAGATCTTCTCGCTCAG
GCGGAGCATGACACGGAGGCGAGACCCATCCTGGTTACCACCAGTGCCTC
CGTGGTCGAAAAGGTGAATACCTGCCTCCGCAGGAGGCTGGCTACGCTTC
CCACGAGAGACACCGCGTCGGAGGCGGTCAAGAAGGGGTTTGCCGTCGTC
TGCAAGGCGGAGCATGACACGGAGGCGAGACCCATCCTGGTTACCACCAG
TGCCTCCGTGGTCGAAAAGGTGAATACCTGCCTCCGCAGGAGGCTGGCTA
CGCTTCCCACGAGAGACACCGCGTCGGAGGCGGTCAAGAAGGGGTTTGCC
GTCGTCTGCAAGGATATGGACGAGGCGGTCGTCGTTAGCGACCTTGTGGC
ACCCGAGCACTTGGAAATTCAGACCGCGGACCCACAAAAGTTGCGAATAG
GTGCGATATGGACGAGGCGGTCGTCGTTAGCGACCTTGTGGCACCCGAGC
ACTTGGAAATTCAGACCGCGGACCCACAAAAGTTGCGAATAGGTGCCTGC
CTGCACTACGGAGGGCTCTTTATCGGGAGCCGTGCCGCCGAGGTGTTGGG
AGACTACGGCGCGGGTCCTAACCATGTCCTTCCGACGGGAGGCACTGCGA
GGTACACGGGCGGCCTGTCGGTAATGACGTTCCTGCGCGTGAGAACATGG
ATGCGGATCGACGACCCGAAGCCGTCGCAGGGACTGCTGCCTGCACTACG
GAGGGCTCTTTATCGGGAGCCGTGCCGCCGAGGTGTTGGGAGACTACGGC
GCGGGTCCTAACCATGTCCTTCCGACGGGAGGCACTGCGAGGTACACGGG
CGGCCTGTCGGTAATGACGTTCCTGCGCGTGAGAACATGGATGCGGATCG
ACGACCCGAAGCCGTCGCAGGGACTGGACGCTATCCACCTGGCGCGGATG
GAAGGTTTGAGGGTCACGCCCGAGCTGCGGAGTGCAGACTTGGACGCTAT
CCACCTGGCGCGGATGGAAGGTTTGAGGGTCACGCCCGAGCTGCGGAGTG
CAGACTTG
back to top