mRNA_F-serratus_M_contig1316.2352.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1316.2352.1 vs. uniprot
Match: A0A6H5KUF2_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUF2_9PHAE) HSP 1 Score: 273 bits (697), Expect = 2.610e-80 Identity = 127/181 (70.17%), Postives = 150/181 (82.87%), Query Frame = 3
Query: 240 ETEGPSSRSLPDMVGEVLRCVVCLLKQRDVVALSETCRPLRQVERVFSSGQQAFPLGPTVDDRHGNTDDAVEVDTETGVLRKAVRPGMGTVLARERVDKMTCYWEFKIEAFSGVRLDIGVATRRSVRRGGLDKDEVWVFDCYGRVCHGTRVRGYGCKVKAGDCVGVLLNTADCSLSFFLQG 782
E P + L DM GE LR V+CLL+QRD+V L TCR LRQ++ F SG++AFPL PTVD+RHGN D+AVEVDTETG LRK RPGMGT++A+ERVDKMTCYWE KI+ F+GVRL++GVATRRS+ RGG DKDE WV DCYGR CHGTR+RGYGCK+KAGD +GVLLNTAD SLSFF++G
Sbjct: 44 ERREPFAMGLVDMAGEFLRSVICLLEQRDMVILGGTCRSLRQIQGGFVSGEEAFPLLPTVDERHGNEDNAVEVDTETGALRKTPRPGMGTIMAKERVDKMTCYWEVKIQVFTGVRLEVGVATRRSIYRGGCDKDECWVIDCYGRACHGTRLRGYGCKLKAGDVLGVLLNTADDSLSFFVKG 224
BLAST of mRNA_F-serratus_M_contig1316.2352.1 vs. uniprot
Match: D8LU41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU41_ECTSI) HSP 1 Score: 197 bits (500), Expect = 3.720e-54 Identity = 104/182 (57.14%), Postives = 127/182 (69.78%), Query Frame = 3
Query: 102 TEALVDGFGAVSVGDERSRFQVQPVVESVPTSCRKLAAEDGQPGKKETEGPSSRSLPDMVGEVLRCVVCLLKQRDVVALSETCRPLRQVERVFSSGQQAFPLGPTVDDRHGNTDDAVEVDTETGVLRKAVRPGMGTVLARERVDKMTCYWEFKIEAFSGVRLDIGVATRRSVRRGGLDKDEV 647
TE L VS+ D+ S QV+ ES A + E P + L DM GEVLR V CLL+Q D+V L TCR LRQ++R F+SG++AFPL PTVD+RHGN D+AV+VDTETGVLRK RPGMGT++A+ERVDKMTCYWE I+ F+GVRL++GVATRRS+ RGG DKDEV
Sbjct: 5 TEGLAMDLKGVSLEDDAS--QVRRDDESTHLESTVAAV------RCERREPFAMGLVDMAGEVLRSVTCLLEQHDMVILGGTCRSLRQIQRGFASGEEAFPLRPTVDERHGNEDNAVQVDTETGVLRKTPRPGMGTIMAKERVDKMTCYWEVNIQVFTGVRLEVGVATRRSIYRGGCDKDEV 178 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1316.2352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1316.2352.1 >prot_F-serratus_M_contig1316.2352.1 ID=prot_F-serratus_M_contig1316.2352.1|Name=mRNA_F-serratus_M_contig1316.2352.1|organism=Fucus serratus male|type=polypeptide|length=388bp MDRVFTTEALVDGFGAVSVGDERSRFQVQPVVESVPTSCRKLAAEDGQPGback to top mRNA from alignment at F-serratus_M_contig1316:64765..92323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1316.2352.1 ID=mRNA_F-serratus_M_contig1316.2352.1|Name=mRNA_F-serratus_M_contig1316.2352.1|organism=Fucus serratus male|type=mRNA|length=27559bp|location=Sequence derived from alignment at F-serratus_M_contig1316:64765..92323+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1316:64765..92323+ >mRNA_F-serratus_M_contig1316.2352.1 ID=mRNA_F-serratus_M_contig1316.2352.1|Name=mRNA_F-serratus_M_contig1316.2352.1|organism=Fucus serratus male|type=CDS|length=2328bp|location=Sequence derived from alignment at F-serratus_M_contig1316:64765..92323+ (Fucus serratus male)back to top |