mRNA_F-serratus_M_contig1312.2340.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1312.2340.1
Unique NamemRNA_F-serratus_M_contig1312.2340.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: D7FP17_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP17_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 9.570e-168
Identity = 239/305 (78.36%), Postives = 268/305 (87.87%), Query Frame = 1
Query:    1 LRMVAAGQVASVEYSVRLEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            L MVA G VA VEYS+R EDGSP+ETRFDQGRV+L+V GGGFAPFLH AVL+MEPGEEK VTVPPK+AFGEYDP  TATL  DSAPG++SVG+VLQLWTGQKA VTE+S E FKIDWNP  AGTSLVMDVKVLEAA AESVLK ATFAGGCFWGLELAFQRA+GVVSTK GYAQG VK P+YS+VC+G+TGHTE+V+VLYDPSET + +LL  FF RHDPTQ NGQGND+GTQYRAGVYFHD+ QK +AE FF +E S   LKK+ TELEEV++FYDAE+EHQQYLQKGGQDA+K+ATETIRCYG
Sbjct:   27 LSMVAVGDVAGVEYSLRTEDGSPFETRFDQGRVKLVVGGGGFAPFLHNAVLKMEPGEEKEVTVPPKDAFGEYDPELTATLGMDSAPGDISVGTVLQLWTGQKATVTEMSGESFKIDWNPDLAGTSLVMDVKVLEAAKAESVLKTATFAGGCFWGLELAFQRAKGVVSTKAGYAQGVVKNPTYSEVCSGKTGHTEAVQVLYDPSETKYADLLTIFFGRHDPTQVNGQGNDKGTQYRAGVYFHDEQQKAVAEKFFADEISARRLKKLATELEEVREFYDAEDEHQQYLQKGGQDARKEATETIRCYG 331          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A835ZFH4_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH4_9STRA)

HSP 1 Score: 319 bits (817), Expect = 7.910e-103
Identity = 167/304 (54.93%), Postives = 216/304 (71.05%), Query Frame = 1
Query:    7 MVAAGQVASVEYSVR-LEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            MVA G V +V+  V+ ++ G P+++ FDQG+VR +V  GGF P +H+AV +M+ GE K + +   +A+G+ D A  ATLP D AP  +  G VL+LWTGQKA+VT+V+ + F +D N   AG  L + ++VL+AAP  S L+ A FA GCFWGLELAFQRA GVVSTKVGY QG  K P+Y++VC G TGH E+VRVL+DP++TTF  LL  F+ RHDPTQ NGQGND GTQYR GVY+H + QK   E     E+++   K IVTE+     F+DAE+ HQQYL+KGGQ AKK A+ETIRCYG
Sbjct:    1 MVAKGDVVTVDLQVKDVKTGKPFDSTFDQGQVRFVVGAGGFLPAIHKAVEKMQVGEAKELQLSGDDAYGDADEALIATLPLDQAPPNLQRGQVLRLWTGQKARVTDVTADAFTLDMNRLNAGAVLSVALRVLDAAP-PSTLETADFAAGCFWGLELAFQRAPGVVSTKVGYTQGAKKDPTYTEVCAGTTGHAEAVRVLFDPAQTTFDALLDVFWGRHDPTQLNGQGNDLGTQYRGGVYYHSEAQKAAIEESRAREQAKHD-KPIVTEVLPAATFWDAEDYHQQYLEKGGQIAKKAASETIRCYG 302          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A7S1XWY0_9STRA (Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWY0_9STRA)

HSP 1 Score: 288 bits (736), Expect = 5.570e-90
Identity = 150/304 (49.34%), Postives = 200/304 (65.79%), Query Frame = 1
Query:   22 QVASVEYSVRLEDGSPY---ETRFDQGRVRLLVDGGGFAPFLHRAVLQMEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLE-AAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEV--KDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            QV  ++Y+++ +DG         FDQG++  +VD G + P +H A   +E GE+  +T+P ++AFG   P   AT P  +AP  + +G VLQ+ TGQK +VTE++ +   ID N P AG  L ++  VL   A  ES +     AGGCFWG+ELAFQRA GVV T VGY  G+   P+Y++VC+G TGHTE+VR+ YD  +TT   LL  FF RHDPTQ N QGNDRGTQYR G+Y+H ++QK+ AEA    ++   G +++VTEL+     DF+ AE+ HQQYLQKGGQDA K ATETIRCYG
Sbjct:   47 QVVEMDYAIKFKDGGAVVDPAPLFDQGKISFVVDHGNYLPGIHEAASTLEIGEKTTLTLPAEKAFGPDIPEMRATAPLAAAPPGVQLGDVLQVSTGQKVRVTEITKDSLTIDGNAPHAGKELELEATVLRRGALGESGVAVMDVAGGCFWGMELAFQRAAGVVGTAVGYTHGEKANPTYNEVCSGATGHTEAVRIYYDEEQTTPAELLDVFFGRHDPTQLNRQGNDRGTQYRGGIYYHTEEQKEAAEAAIAAQQKVYGDQEVVTELKPAADSDFWHAEDYHQQYLQKGGQDACKTATETIRCYG 350          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A7S3UAA2_9CHLO (Peptidylprolyl isomerase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UAA2_9CHLO)

HSP 1 Score: 268 bits (685), Expect = 1.270e-82
Identity = 138/299 (46.15%), Postives = 201/299 (67.22%), Query Frame = 1
Query:   19 GQVASVEYSVRLEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            G  A+V Y+ +L+DGS ++T  ++  +  +V GG        AVL ++ GE +++ V P++A+G       A +PK+SAP  + VG+V+QL  G  A++T V+D+   ID N P AG +L  +V++L+  PA S L  ATF GGCFWGLELA+QR  GV+ST VGYA G  + P+Y +VC+G TGH E+V+V Y+P    ++ LL+ F+DR DPT  N QGND GTQYR G+Y H  +Q++IA    ++E+++   K IVTE+E++  +Y AE+ HQQYLQKGGQ A+K+ ++ IRCYG
Sbjct:   34 GDYATVHYTGKLDDGSVFDTSREREPLEFIVGGGKVIAGFDDAVLGLQAGESRMLQVGPEKAYGSPRTDLVADVPKESAPDGLEVGNVVQLSNGMTARITSVTDDAITIDANHPLAGMALTFEVELLDLVPASS-LGLATFGGGCFWGLELAYQRLPGVLSTSVGYANGTKEDPTYQEVCSGETGHAEAVQVTYNPKAVGYEQLLKLFWDRVDPTTLNRQGNDVGTQYRTGIYVHTPEQREIAHRSLKDEQAKHE-KPIVTEVEDLSVYYPAEDYHQQYLQKGGQSAEKECSDPIRCYG 330          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A7S0Q160_9EUKA (Peptidylprolyl isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q160_9EUKA)

HSP 1 Score: 261 bits (668), Expect = 9.220e-80
Identity = 149/310 (48.06%), Postives = 196/310 (63.23%), Query Frame = 1
Query:    7 MVAAGQVASVEYSVR--LEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEP-GEEKVVTVPPKEAFGEYDPAK-TATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVL-EAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQ--ANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            M   G   SV Y +      G   +T FD G V L+V G GF P LH  +  +   GE+K   + P E FG+ DP      +P ++AP  +  G  +QL TG KA+V +V DE   ID N P AG  L + V+++ +  PA+SVL+ ATFAGGCFWGLELAFQR  GV++T VGY+QG VK PSY  VC+G TGHTE+V + +DP++TT+Q L   F+DR    +   N  GNDRGTQYR G+Y H D Q ++A+A  E  +   G ++I TE++  + F+DAE+ HQQYLQKGGQ A+K A ETIRCYG
Sbjct:   46 MAQVGDYVSVRYGLADATTGGVLKDTAFDIGEVSLVV-GTGFIPGLHARIASLSAVGEQKSFELAPAEGFGDTDPRLGPVRVPLENAPPGLETGMQVQLSTGLKARVADVDDEAVTIDANHPLAGKPLKLTVELISQPLPAQSVLQCATFAGGCFWGLELAFQREPGVIATAVGYSQGGVKEPSYEQVCSGSTGHTEAVTLQFDPAKTTYQRLCELFWDRLGDNRHLLNQVGNDRGTQYRHGIYPHTDKQMEVAKASLEAVQQAAGGREIFTEIKAAEFFWDAEDYHQQYLQKGGQSARKYAKETIRCYG 354          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A7S2WGJ4_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGJ4_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.130e-78
Identity = 150/314 (47.77%), Postives = 200/314 (63.69%), Query Frame = 1
Query:   10 VAAGQVASVEYSVRLEDGSP----YETRFDQGRVRLLVDGGGFAPFLHRAVLQME-PGEEKVVTVPPKEAFGEYDPAK-TATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLE-AAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDR--HDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKK---IVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            +A+G V  V++ V   D        +  FD+G VR +V+ GG+ P LH++VL M  PGE+K  T+ P++AFG  DP +   ++P D+AP  + VG ++QL TG  A+VT V+ +   ID N   AG SL   V+VLE  +P  + ++ A FA GCFWG ELAF R  GV++TKVGY QG+ + PSY +VC+G TGHTE V+V+YDP E +F  LL  F++R   +  + N  GNDRGTQYR GVYFH ++Q+  AE      KSR  L +   I TE+     F+DAE+ HQQYLQKGGQ AKK   ETIRCYG
Sbjct:   39 IASGDVVKVDWRVVQSDSQQPLPAAQQVFDEGVVRFVVNSGGYLPALHQSVLSMSSPGEKKTFTIKPEDAFGPADPNRGPVSVPADAAPQGLKVGDMVQLMTGATARVTAVTADTITIDANHELAGKSLEATVEVLEHQSPEAAGVELADFAIGCFWGAELAFLRMPGVLATKVGYTQGEREEPSYEEVCSGSTGHTECVQVVYDPKEVSFNQLLDLFWERLGDNKYKLNQVGNDRGTQYRHGVYFHTEEQRLAAE------KSRASLPRVSDIATEIMPADKFWDAEDYHQQYLQKGGQSAKKNDEETIRCYG 346          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A7S4JD19_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JD19_9EUKA)

HSP 1 Score: 253 bits (645), Expect = 2.320e-76
Identity = 153/315 (48.57%), Postives = 193/315 (61.27%), Query Frame = 1
Query:    1 LRMVAA-GQVASVEYSVR----LEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEP-GEEKVVTVPPKEAFGEYDPAK-TATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAA-PAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQ--ANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            +RM A  G    V YS+      E  +  E  FDQG V L+V  GGF P LH  +  +   G  ++ T+ P E FG+ +PA   A +P  S P  +  G  ++L TG KA VTEV DE   ID N P AG  L + V++L +  PA  VL+ ATFAGGCFWGLELAFQR  GVV+T VGY QG +  P+Y  VC+G TGHTE+V V YDP+E ++  L   F++R    +   N  GNDRGTQYR G+Y HD+ Q ++A A  E  K  +  K I TE+   + F+DAE+ HQQYLQKGGQDAKK A ETIRCYG
Sbjct:   40 VRMTATPGDYVKVRYSLADAATKEPLTGPEAVFDQGEVSLVVGAGGFIPGLHSRIPSLAAVGATEMFTLTPAECFGDANPALGPARVPLASCPPGLEAGMKVRLATGMKAVVTEVDDEAVTIDANHPLAGKELELTVELLGSPQPAADVLQTATFAGGCFWGLELAFQRETGVVTTAVGYTQGSIDDPTYEAVCSGTTGHTEAVLVKYDPTEVSYNRLCELFWERLGDNRFLLNQVGNDRGTQYRHGIYTHDEAQAEVAAASLE--KLAVDGKPIHTEVLAAEKFWDAEDYHQQYLQKGGQDAKKSAEETIRCYG 352          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A7S0NS95_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NS95_9EUKA)

HSP 1 Score: 246 bits (628), Expect = 4.040e-74
Identity = 143/310 (46.13%), Postives = 187/310 (60.32%), Query Frame = 1
Query:    7 MVAAGQVASVEYSVR--LEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEP-GEEKVVTVPPKEAFGEYDPAK-TATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVL-EAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQ--ANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIRCYG 915
            MV AG    V+Y +   L   +  ET FD G V L+V  GGF P LH  + ++    E++   + P E FGE DP      +P+  AP  ++ G++++L  G KA+VTEV  E   ID N P AG +  + V++  +  PA+  L+ A FAGGCFWGLELAFQR  GV+ST VGYAQG    PSY  VC+G TGHTE+V VL+DP  T +  L   F++R    +   N  GND+GTQYR G+Y   D Q + A A  E  +     KKI TE+E  + F+ AE+ HQQYL KGGQDA+K+A ETIRCYG
Sbjct:   21 MVQAGDYVRVKYGLADTLTGDALGETVFDVGDVSLVVGKGGFIPGLHARLAEINAMNEQQAFELAPSECFGEADPRLGPVRVPRAQAPDGLTPGTMVKLSNGLKARVTEVDSEAVTIDANHPHAGKAFTLTVELASQPQPADIALEKAVFAGGCFWGLELAFQREPGVISTAVGYAQGQKSEPSYEQVCSGSTGHTEAVLVLFDPEVTNYNRLCELFWERLGDNRYLLNQVGNDQGTQYRHGIYPQSDSQMESALASLEAARKTSAGKKICTEIEPSETFWMAEDYHQQYLMKGGQDARKEAQETIRCYG 330          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A2P6TNG2_CHLSO (Peptidylprolyl isomerase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNG2_CHLSO)

HSP 1 Score: 246 bits (628), Expect = 1.900e-73
Identity = 137/308 (44.48%), Postives = 186/308 (60.39%), Query Frame = 1
Query:   13 AAGQVASVEYSVRLEDGSPYETRFDQG--RVRLLVDGGGFAPFLHRAVLQMEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMSVGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGG-----QDAKKQATETIRCYG 915
            A G      YS+ + DG  +++   +G  + + ++      P  H+AV  ++ GE +   V P +A+GE      A +P+  AP  ++VG V+QL  G  A V+ + D    ID N P AG  L  DV+V    PA S L+ ATF  GCFWG ELAFQR  GVV T VGY+QG  K PSY DVC+G TGH E V+V++DPSE +++ LL  F+ RHDPT  N QG D GTQYR+G+Y H  +QK  AEA    +  +LG + +VTE+EE+ +FY AEE HQ+YL++GG     Q A+K   + IRCYG
Sbjct:   78 APGDYVEAHYSI-INDGEVFDSSRSEGGKQAQFILGSENLVPGFHQAVGGLKVGESRQWLVRPDDAYGERRDEMMAQIPRSQAPEGLTVGQVVQLSNGMPAVVSAMDDSSITIDANHPLAGKELTFDVEVTRIIPA-SRLQKATFGAGCFWGPELAFQRVPGVVQTAVGYSQGHAKNPSYQDVCSGTTGHAEVVQVVFDPSEVSYEQLLDVFWARHDPTTLNRQGGDVGTQYRSGIYCHTPEQKAAAEASKAAQNEKLGGQ-VVTEIEEINNFYVAEEFHQKYLERGGRFGQGQSAEKGCNDPIRCYG 382          
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Match: A0A8J9R9Y1_9CHLO (Probable peptide methionine sulfoxide reductase at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9R9Y1_9CHLO)

HSP 1 Score: 241 bits (616), Expect = 1.610e-72
Identity = 134/301 (44.52%), Postives = 186/301 (61.79%), Query Frame = 1
Query:   34 VEYSVRLEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQMEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMS--VGSVLQLWTGQKAKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAAPAESVLKGATFAGGCFWGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDPSETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAFFEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGG-----QDAKKQATETIRCYG 915
            V Y   L+DG+ ++   ++  +  +V GG        AV+ +  GE +   VPP+ A+GE+    TA++P    P   S   G  ++L  G  A V E +DE  K+D+NPP AG +L  +V++++   A S L+ ATF  GCFWG EL FQR  GVV+T+VGY+QG V+ P+Y DVC+G TGHTE+V+V YDPS  +++ LL  F+ + DPTQ NGQG DRGTQYR G+Y H ++Q  IAEA   +   +L    I TE+E V+ ++ AEE HQ+YL KGG     QD  K  T+ IRCYG
Sbjct:   18 VHYKGTLDDGTVFDCSHEREPLGFIVGGGKVIRGFDDAVIGLAKGERRTERVPPENAYGEWRSELTASIPTAQLPEGTSFKAGDSVRLSNGADAVVIESTDEALKLDFNPPMAGKALTFEVELVKLTKA-SHLQKATFGAGCFWGPELMFQRIPGVVATEVGYSQGHVENPTYEDVCSGDTGHTEAVQVTYDPSLVSYEELLGAFWKQIDPTQVNGQGGDRGTQYRTGIYTHTEEQLHIAEASKSDMAKQLQAP-IATEVEAVRSYWTAEEYHQEYLAKGGRFGRAQDPSKGCTDPIRCYG 316          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1312.2340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP17_ECTSI9.570e-16878.36Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A835ZFH4_9STRA7.910e-10354.93Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S1XWY0_9STRA5.570e-9049.34Peptidylprolyl isomerase n=1 Tax=Phaeomonas parva ... [more]
A0A7S3UAA2_9CHLO1.270e-8246.15Peptidylprolyl isomerase n=1 Tax=Picocystis salina... [more]
A0A7S0Q160_9EUKA9.220e-8048.06Peptidylprolyl isomerase n=1 Tax=Coccolithus braar... [more]
A0A7S2WGJ4_9STRA1.130e-7847.77Peptidylprolyl isomerase n=1 Tax=Rhizochromulina m... [more]
A0A7S4JD19_9EUKA2.320e-7648.57Peptide-methionine (S)-S-oxide reductase n=1 Tax=P... [more]
A0A7S0NS95_9EUKA4.040e-7446.13Peptide-methionine (S)-S-oxide reductase n=1 Tax=C... [more]
A0A2P6TNG2_CHLSO1.900e-7344.48Peptidylprolyl isomerase n=1 Tax=Chlorella sorokin... [more]
A0A8J9R9Y1_9CHLO1.610e-7244.52Probable peptide methionine sulfoxide reductase at... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1312contigF-serratus_M_contig1312:146461..161390 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score487.6
Seed ortholog evalue4.1e-135
Seed eggNOG ortholog2880.D7FP17
Preferred nameMSRA4
KEGG koko:K02214,ko:K07304,ko:K14442,ko:K16914
KEGG Pathwayko03018,ko04110,ko04111,ko04113,map03018,map04110,map04111,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0008113,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0031967,GO:0031975,GO:0033554,GO:0033744,GO:0034599,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071704,GO:0080167,GO:1901564
EggNOG free text desc.peptide-methionine (S)-S-oxide reductase activity
EggNOG OGsCOG0225@1,KOG1635@2759
Ec32 ortholog descriptionSecreted peptide methionine sulfoxide reductase with FKBP domain
Ec32 orthologEc-05_001760.1
EC1.14.11.27,1.8.4.11,2.7.11.1,3.6.4.13
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009,ko03019,ko03032,ko03036
Exons9
Model size1492
Cds size912
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929273.7023623-UTR-F-serratus_M_contig1312:146460..1464661622929273.7023623-UTR-F-serratus_M_contig1312:146460..146466Fucus serratus maleUTRF-serratus_M_contig1312 146461..146466 +
1690962779.0327172-UTR-F-serratus_M_contig1312:146460..1464661690962779.0327172-UTR-F-serratus_M_contig1312:146460..146466Fucus serratus maleUTRF-serratus_M_contig1312 146461..146466 +
1622929273.8777738-UTR-F-serratus_M_contig1312:160816..1613901622929273.8777738-UTR-F-serratus_M_contig1312:160816..161390Fucus serratus maleUTRF-serratus_M_contig1312 160817..161390 +
1690962779.1329827-UTR-F-serratus_M_contig1312:160816..1613901690962779.1329827-UTR-F-serratus_M_contig1312:160816..161390Fucus serratus maleUTRF-serratus_M_contig1312 160817..161390 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929273.717078-CDS-F-serratus_M_contig1312:146466..1465501622929273.717078-CDS-F-serratus_M_contig1312:146466..146550Fucus serratus maleCDSF-serratus_M_contig1312 146467..146550 +
1690962779.0427628-CDS-F-serratus_M_contig1312:146466..1465501690962779.0427628-CDS-F-serratus_M_contig1312:146466..146550Fucus serratus maleCDSF-serratus_M_contig1312 146467..146550 +
1622929273.7275767-CDS-F-serratus_M_contig1312:149983..1501071622929273.7275767-CDS-F-serratus_M_contig1312:149983..150107Fucus serratus maleCDSF-serratus_M_contig1312 149984..150107 +
1690962779.050418-CDS-F-serratus_M_contig1312:149983..1501071690962779.050418-CDS-F-serratus_M_contig1312:149983..150107Fucus serratus maleCDSF-serratus_M_contig1312 149984..150107 +
1622929273.7417836-CDS-F-serratus_M_contig1312:154178..1542461622929273.7417836-CDS-F-serratus_M_contig1312:154178..154246Fucus serratus maleCDSF-serratus_M_contig1312 154179..154246 +
1690962779.0617337-CDS-F-serratus_M_contig1312:154178..1542461690962779.0617337-CDS-F-serratus_M_contig1312:154178..154246Fucus serratus maleCDSF-serratus_M_contig1312 154179..154246 +
1622929273.7581089-CDS-F-serratus_M_contig1312:155243..1553391622929273.7581089-CDS-F-serratus_M_contig1312:155243..155339Fucus serratus maleCDSF-serratus_M_contig1312 155244..155339 +
1690962779.0728335-CDS-F-serratus_M_contig1312:155243..1553391690962779.0728335-CDS-F-serratus_M_contig1312:155243..155339Fucus serratus maleCDSF-serratus_M_contig1312 155244..155339 +
1622929273.7703729-CDS-F-serratus_M_contig1312:155822..1559511622929273.7703729-CDS-F-serratus_M_contig1312:155822..155951Fucus serratus maleCDSF-serratus_M_contig1312 155823..155951 +
1690962779.08035-CDS-F-serratus_M_contig1312:155822..1559511690962779.08035-CDS-F-serratus_M_contig1312:155822..155951Fucus serratus maleCDSF-serratus_M_contig1312 155823..155951 +
1622929273.8125246-CDS-F-serratus_M_contig1312:157773..1578571622929273.8125246-CDS-F-serratus_M_contig1312:157773..157857Fucus serratus maleCDSF-serratus_M_contig1312 157774..157857 +
1690962779.0885425-CDS-F-serratus_M_contig1312:157773..1578571690962779.0885425-CDS-F-serratus_M_contig1312:157773..157857Fucus serratus maleCDSF-serratus_M_contig1312 157774..157857 +
1622929273.8265383-CDS-F-serratus_M_contig1312:159183..1593271622929273.8265383-CDS-F-serratus_M_contig1312:159183..159327Fucus serratus maleCDSF-serratus_M_contig1312 159184..159327 +
1690962779.09775-CDS-F-serratus_M_contig1312:159183..1593271690962779.09775-CDS-F-serratus_M_contig1312:159183..159327Fucus serratus maleCDSF-serratus_M_contig1312 159184..159327 +
1622929273.8433084-CDS-F-serratus_M_contig1312:160102..1602191622929273.8433084-CDS-F-serratus_M_contig1312:160102..160219Fucus serratus maleCDSF-serratus_M_contig1312 160103..160219 +
1690962779.1079874-CDS-F-serratus_M_contig1312:160102..1602191690962779.1079874-CDS-F-serratus_M_contig1312:160102..160219Fucus serratus maleCDSF-serratus_M_contig1312 160103..160219 +
1622929273.8632765-CDS-F-serratus_M_contig1312:160750..1608161622929273.8632765-CDS-F-serratus_M_contig1312:160750..160816Fucus serratus maleCDSF-serratus_M_contig1312 160751..160816 +
1690962779.1183066-CDS-F-serratus_M_contig1312:160750..1608161690962779.1183066-CDS-F-serratus_M_contig1312:160750..160816Fucus serratus maleCDSF-serratus_M_contig1312 160751..160816 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1312.2340.1prot_F-serratus_M_contig1312.2340.1Fucus serratus malepolypeptideF-serratus_M_contig1312 146467..160816 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1312.2340.1

>prot_F-serratus_M_contig1312.2340.1 ID=prot_F-serratus_M_contig1312.2340.1|Name=mRNA_F-serratus_M_contig1312.2340.1|organism=Fucus serratus male|type=polypeptide|length=304bp
MVAAGQVASVEYSVRLEDGSPYETRFDQGRVRLLVDGGGFAPFLHRAVLQ
MEPGEEKVVTVPPKEAFGEYDPAKTATLPKDSAPGEMSVGSVLQLWTGQK
AKVTEVSDEGFKIDWNPPGAGTSLVMDVKVLEAAPAESVLKGATFAGGCF
WGLELAFQRAQGVVSTKVGYAQGDVKRPSYSDVCTGRTGHTESVRVLYDP
SETTFQNLLRTFFDRHDPTQANGQGNDRGTQYRAGVYFHDDDQKKIAEAF
FEEEKSRLGLKKIVTELEEVKDFYDAEEEHQQYLQKGGQDAKKQATETIR
CYG*
back to top

mRNA from alignment at F-serratus_M_contig1312:146461..161390+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1312.2340.1 ID=mRNA_F-serratus_M_contig1312.2340.1|Name=mRNA_F-serratus_M_contig1312.2340.1|organism=Fucus serratus male|type=mRNA|length=14930bp|location=Sequence derived from alignment at F-serratus_M_contig1312:146461..161390+ (Fucus serratus male)
TTGAGGATGGTGGCGGCGGGACAGGTTGCGAGCGTGGAGTACTCGGTCAG GCTGGAGGACGGCTCGCCGTACGAGACTCGCTTCGACCAGGTTAATTTTC GCTCTGTAAAAAAGCAACAACGGTAGAGCTGGTACAGCGCACCGTAGAAG CCCCCCCTCGAGAACGCCTCCCCATTACAGCCTGTATGGTATGTCCTGAG AGAGACAACAACACAAAACTAAAAAACAGGTTGATGAATGTGCATTTCGG GGGGGGGGGGATGGTATCAAGGAAATAAGTTCCTTGAGACTTTGATGAAG GAAATACGTTCCCTGAGACTTGAAGACCAAGGAGATAGTTTTAACGCCAA CCTCTCGCTTTTAAGTTTTTTTGTTTGTTTTTCGTTCTTTTTCCTTTGTA ACAGAAGATGGTTGGAGAATGGGGCGTTTTTTTTTCTGAAGAGTGTCTCG TTCGACCAAACCTTTATGCTTGTGATGCATGCAGCCTGAGTATGGAGATG AGCAGGCTGACGCGGGATGAGACTGCCGAACCCGTCTCGCGAGACCAAAT TCTCAGGCGCGAACGAGGACAGGGAAAACATAATTTCCCTGTTCAGCTGA CCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCTGCTATAT GTGATGGCCATGCATACATACATACACCCCCCTCCCCCAAGTGTATCTCT CATACCATATTATGCCGAAGTTCTAGAACTCTCAATACAAATTATCATTT CAGTACACTTACGTATTATGCCATGATCTAGTCCAATGCCATACCTGGTA CAGTACTATAACAGAGAGTAATAGACACACATCGTAGTGGCTATTGTTGA AACCTAAGTATATTGTGCATATATAGTCTATCTATCTATGTATCTATCTA TATCACATACTCGGAGCAATATAAATACATGACCCGTTACCACCCGATTC TAATTTCTAGTCGTCCCCCATAAGATCTGGCCGAAATACAAACGATCCCC CCTCCCCCCCAAGAAACAGAAGAACTCGAGAAATAGACTAAATCAGCTGG AAATAATACCTCGTATACATATGCATTTGTAAACCTGGTATATAGACTAT ATTTATCAACAAATTCCAGGTATAATAGTTCAAGAGTGCTACAGTAATCA ACTCTCTGCGGAGGCCTACTCATACCTCTGCATATGTTGGCACACATATT TTTGGCACTATGTGCACGTATTTCCGGCGTTTTTGTGGCGTGGAAGGAAA AGACGTGCGGTATTATTTACCGAGTTTTGTTCTTGGGTTTCAACTCTATC TCTAGTCGATAGTCGATATTCGATGCTGATCTGTAGGAGATATCCTCGAT TTGTGAAAGTTTCCGCGACGTGTTTGACTTGTCGGTGGACCAGTTCAACG ATTGGGGGCGGGGCGGGGATGTAACATATTTGTCCCCGTTTTGGCAGGGA ACGGCACGAAAAATAGTTCCTACGGGGACATATTTTACCAAACCCCTGGT CAAATGCGATGAATTCGGGGCAAGCTTGCCGACCATGTAGGGGATCATGT ATTCTCATTCCCTGAAGGGGCTGTTTGGTGACCTCCCCCGGGGACGAAAT CGTCGTATCCTTGCCTTCCCCAATTGTTGAACCCCTCGGTGATTGTGACG GTTGAGTTTTCTGTTGTATAAGCCCAAATTGTAAAAAACATGTTTAGAGC TCTGAGTTGTTGACGAAAGCTCATATTTTTTTGTTTTTTTTGTTTGCCAG CTGAGCTGTGTAGGTGAGAAGGCTCAATCTGTGTGAAGGTTTTGACCGAC TGGGCCGCACACCCCTAAAACCCCAGTTTTAATTAAATTTGGTTTCATTT GATTGGTTCAGTTCAGTGTTTTGATACCAGAAACAAATAAAATGGAAAAA GGCGCCGTTAAAACAAGTAAAAAATACCTGAACTGGGCGCGTTTGTTTTT TTTACCCTTGTTTCTTGAAATAGTGTTCATTTTCCCCCAAAGTAGTACGT GGTAAATACCTCAGTGGTACAAAGTAGCAGATTTCTTCGTTCTCCATCAA CCACCCCCTCTCCTCCCGCCTCCACCTATTGAAATACCCATTGAAATGCC TATTATAATCTACAGATATCCCAACCCTCCCCCACCCCCTCCCACCCTAT CCCCTCCCAACAAAACACATCGGCGTGGAAACCCCCAAGTGATCGGCGCG CATCTTAAACCGTCCAGAAAAGTGGCGGAAAAAAAAAAGTGTAAGGACGC GTTTGAGAGCGAAACACGACTTCGAGGTCTGTCGTTTCTAAATATAGCGC AAGCCACAGGACTGTCGAGAGGACGTACAGCAATGTGTCAAATTCAAATG GCCGAAGAGGCGCAGAGAAGGGCTTTCGGCGTCCGGTAAAGCTCACCCCA GCTCCTACCGGTACCTCCCACAAGCGCCCGGCAATTTCTAGTGCATCTCG GTATGATACGACAAAGCAACCAAAAGAGCAAAAAGAGCCAAAAGCCCGCA GTTGATGGTGCTAGGATGAGATAGGAACCGTATCCGGGAAGAGAAGGGGA GAGGCTAAGAAAAAAAATGAAATGGAGGCGGAACAGCCATGCACCAGAAG CAGCAGCAGCAGCAGCTGATAGCAACCAAAGCTGTCTTAAAACAAATACA GCGACTTCAACAACACAGTTGTCTTCCTTACATCTTGGCGTCGTCCATTC GATTGGATTCGATTCCACTCACTGGCCTCTCGAATAGATAAGATACTTGT GTGGATCGGTTCATGACGGCCACGGATTGCTCTTCCGCCGGTGCTTCCTT CGGCAGTTGGGAACGGCGGCGAGTCAGCTCACGAGTTTCCTGCCGTGGTG CCTGGGTGGGCCCAAGGCACCGCGCGCGATTCCGTGTGCCATACTTGGTG GTATAGACTATCTGATGTAATGTAACGTAATTTATTTCTATAATGTATCT TGTCTATCTGTGGTGCTCTCTCCTGGGGCTTGATGTTAAAAAAACCCGAG TCGCACACACACAACATTTATAAAAAAGACATGCTTTCAATACTGTACGT GGAGTTTTTTGTTTTGCTTGTTTTTTTCACGTCGAAAAGTATGACGTGTT GAAAAAAAAAAGTCAAGATTCCAAATCGTTTTCATATTTATTTATTTTTG CATTTTTCGAGTCTTTTTGACGGTTCTTGGCCTTCTTTTTTAGCTACGTT ATTCTCCTCAAAATAGTAGGTCGTTTGACACAGATGACTCTCATTTTGGC ATTGTTTTGCACATAACAGTGCCTCTTCGCGGAGGGGGGGGATTTATCCA AACACAAAAATAGTTACTTATGTATGCACACCGTTTTTGTTAAAAAACAA AAAAACACCCAATACATAACCGCGGGTACTATTACTACCGTGTTTTTTCT GGGAAGAAGAACGCTTAAAAAAATGGTGGAAAAACGAGAGAAAAAAATGA AATGGAGCCACCACTCGCAAACCCTCCCAACCCCCTTCCCACTGGTGTTC GTTCGGCTGACGGGTTTCCACAGGGACGTGTACGGCTTTTGGTGGACGGG GGAGGCTTTGCGCCATTTCTCCACCGAGCGGTGCTTCAAATGGAGCCCGG CGAGGAGAAGGTGGTGACCGTTCCTCCCAAGGAAGCCTTCGGCGAATGTG AGCCGATGACGCCTACCGTCTCGTAGGAAACCCCTAGGTGTTGCGTTTTC TTTTTCGCTTTAGTGGAGGGGTGAGGGGGGGGGGGGGTGAGGGGGAGTTC CTTTACTCCCGGTTCGAAGATACGTGTGTGTGTGTCTGTGTGTGTGATTT TTGTATTGTACCACTCTAACTGAGAGTATTATCATTTTGTGTTTGTGATT ATTTTTGGTTTTCTTGATGATATACACTGGCCGACCTACAACGTTTGGTC GTCATCCCAACCTGTTGGATGATTCCACAAATAGCGCATAACCCCCCCCC CACTTTTTTTTTTTTTTTCATGAAACGCCGTCGTCACGCGGTAATGTCAT GGCACGTGTCTCAAAAAGACGGATGCGCTCTGTGGCTGATCAGGCCCATG AACGACCCCCATGCCGCAACGTTACTATTAATATTAATACTCTCTTATAG CACCCATCACTATCGCTCACAGTAACCAACGCTTCGTCTTGCAGTACATC CGGTTTGACTCCTCCTGGGGAGGGATGGGGAACTCGTCCGTGACCTGCAC GGGGGCAAGGTGCTGAGTTCCTCGCCAAGCCCCGGGAGTCCTCGTACGCT GTCCGCCCGTGACGTGGAGGGGCGTATCTTGTCTCCCACCGGACACAAGA ACGAATGGGCGATCGATAGGATCGCTGTCCCAATCGCAACTCGTCTTCCT CCTCCTGCTGTTGTGGATTGCTAAAAAATCACACCATATTTTCTCAGTAG GTCTTTTAGGTGTCTTCAATCACCGTTGCTGGCTCCTCGGCGCTCCTCCT GTAATACGGTCGTTTCTGTATGCAGCCAGGCCGAGCGTTGCTACGTTCTA CGCCTCACCCCCCCCCCCCCCCCCCCACCTCCCGCGTTCGAGTTTTAATA TTGGGGGGGCGGGGATATCACAAATTTGTCCCCGTTTTGGGAGGGGACGG CACGAAAATAGCCCTCTCGTGGAGTTATTCGACCAACTCCCTGGTCAAAT GAGTTGAAGAAGTTGACAGGGTGTAACCCCCCTCCCCCTCCACACACACA GAGGTACTGTATCCAAGTTTGACGGGGGCAAGAAAAAGAGGTATCACGGA CGCAGCGCAATTGCGGGGGGGCGAAGAAGTTGGCAGGGTGTAACCCCCCC CCCCCCCTTCATCACACACACAGATAGATAATTTGTTGGTAAATCAGGTA ATGAAGACGCTGTTACCTACTTACGCAAGCTCTAGTAATACTTCCGGTGA GGCAATAAAAAAACAACTTGATTCATGTACGGTACCTTGTGCTGCCTTCT CCCTGCGAAATCTGGTTTCGGGGTAAGTGAGTGTGGGAGGGTCTTTCCGG CGGTTGCAGGGCCGGACTCGCCCCGCAAGAGATGCAGACAACTGGCTGTC TTCGCGATTCAGCCGGTCTGTTGAGACGCGGCGGTGGTTTGGTTGGTTGA GGGTGGTGTTCACCACGGGTGGCTCTTCCGAGCTCCAATTTGGTTCCCTT CGGGAGGCGGTGACAGGCGAGAGGCAGGGGGCACTGTCGCGGAAAGCCTC GTAGAGCGCCGCAGCAGGCACAAGCCTGTTTACGTTTGGGTGGGTAAGCA CCAGATTCGGTGAGGGTGGAGGGCGGCTTTATCGTTGACCAGCCAGGGGA GTGCTGAACTCTTGTGCGCGAGATTCAATGACGCGAACCGGGGGGTTTCT GTAGGGAAAGCTGATCTGTGACCACGGACTGTTTTATTCTCACGAGGGCC CATCAAGGAGCGGCGCAAAGGCAAGATTTCTGGGGCGTTTTCCAGGGATG CACAGGGCTTTGGACGACTGGATGCTGGCTCGCGTGCAGGCTGCAGAAAA CGCCTTCACCGCCATGGACCTCGGTATTTAAATTTTCCTTATTCTGCGAG ACGTGTGGCGTGGAGAAACTTGAGCTTGTTGATGAAATCTGATTGGAGCG TAGTTTTCCCGCTTTGTTGCCGAAAACGCTGATCGTGAGGAGGCGACAAC AATCCGAGTCGATCGAGGTTGCTCTCGATATGGAGTAAGGAGATTTGGTG AACCGTTTCGACATTGGTCCTTGCCTTTCCTTGTAAAGTATATAATAACT TGTCTTTGTGCACCCTTCCGATAGCGTGAATCTGGTAGATGGGCAGCAAG CACATCTCACAGTCTTCTGCCCATCTACTCCAAACCGTAGGAACTGTAGT TCGTACCCGAAGACATGGTCTTGACGCCGATGAGGTTCCGATGTTTTCAG TTGGTTTGACCTGACCTGGCGAGGGTGTTGTGGCGATTTGGATCCCTGTT GGTTCGAGTAGCGGACTGTCACCATGGTGTGACCCGATGACCTTCGTACC TCTTTGTGACCACGTGCGGGATTGACGTTTGATAGGTCATAGTCTATGGC TGACTTGTTGTATCACCGTGGTTTCTTGAGTTGCAAGGACAATGTGTGTT GTGTGTTTTCTTCCCATCCATTCTGGACATCAAGTTGTTGGACGTACCAG CCGGGGTCACACAGGAGGAAGGTCACACAGGATTTCTCATCCACCTTCCT TCTGCGGTGCGTGCCTTAATTTCTATCGCGAGAAGGACAATACGCTGAAT GTTTGAAGCATCAACGACATACACACCTACATACATACAACGGTACTGCA AATAAAATGAAAACACACTGCTGGTGTTCCCACACAAAGTGTAGTATGTA TGGAATTTATAGCAAAAAGTGTGGTGTTTATTGTGCTATTCGTGTGAACA ACAGTAGGAATGACTGTACCCACCTGGATCGGTTCTCTTGTGTCTGCAGA AGGTTTTACAAAAAAGATTTAATACAAACAATCTTTAAAAGAAACACAAA ATAAAATAATAAAAACAAAATGAACAAAAACAAAAACAAACAAAAAACTG AATTAATAAAAGAGTACTAAGAAAAAAACTAAAATGAAGAAACACAAAAA TAATGAAAAAAAATCGTGGTGATGCAAAACCGCACCGAAAAATATTTATC GAGGTGGAGAGGGGGGGCGCTCATCAATCCACTCCTTAAAACCCGGAGGG TCGTGTGGTGCCGTAAGTGAATCCACCAGTTTTTCCCTCCCTTTGGGGAT TTAGGGGGGGGGGGGGTTCCTGTACGTCACAGTACGTACCGCCTGGCACG TGCTAGGCTGCGGATATTTGTACGCCGTACAAGGGATATTATTTTGCTCG GTGGGACCTGTTTTTTTCCAGAGCGATGGAGGATAAGGTGCACTGAGTGT TTTACTGCAGGGGACGTGGTATGCCATCCCCCCCCGGGGGTACAAGACCG GTGTCCCCTTTCCCTTACCTATGTTGCGGTGGTACGGATGCTACCATATC AGAGCATACATAATATATTCATTTATTTTTGGTGGGGGAGGTTGGAATCA TTTATCTTTTATCTCTCTGAGTTATGCTTGATTTCTGTCCCCTTGAGGGT TGGGATCATTTATTTTTTTATCTGGCCTTGTGCCGGCGGACCCTCGGTGG TAAACGGTGTCGGTACGCTATTGCGTGACCTGATAAACTCGGGATGAAGT AACCCTATGATGGCGGTTGGCGGTATAGATGGGACGCTGTCATAGTCTGT ATCGCCTTCATAGTCCATATCGCGGAGAGCGGGAGAAGTGAGAGGAGTCC GGTGTTTGAGCACACACCCGATTCAGCTTGAGGTTGGAGAATGAGCGGGA TAGTACAGTCGCACCCGTCTCGCAAGACCAAATTCTCAGGCGCGAACGGA GCCAGAGAAAAATCGTGTTTTTGCATGTTAGCAGCAGGATTGGCAACCAC ACCTATATTAGTTAGTTCATACGCTACTGAATCTGCTGACGATACATGAA TACCATACATAAATACCATACATAAATAAATACCATACGTAAATACCTTA CATTATTACCATACATGACTACCATACATAATTTTACCCCCCCCCCTCTT CCGAGCAGTCGTAGAAGAGTCCTCCGTATTAAACCGCAGTAGTGTAATTT TTAAAATAGCACATGCCTACATGGATGCACCAGGAAAAAAAATTCCCCCC GTGGTGGTTTCGTGGCAGATGACCCCGCAAAGACGGCGACCCTGCCAAAG GATTCGGCGCCAGGGGAGATGAGCGTCGGGTCGGTGGTGAGCAACAAAGG CCGGAAACCGAGCCTACTCTTTTTGTTTTGTTTTGAGATTTGTTTTGAGT TGTTGTTTCGTTTTTTGTTTCGTTTTGTGCTGTGTCATGCCGAAGTCGGC AAACGATGAGTGAGCCGATGGGTTCCCCCACGTTCTGAGAGGGCATGTCA GGTTAAGCGGCAGAAAAAAAACAAAAACGAACAAAGGAAAATCGAGGAAG AGATAAAGTGGCAGGCTTCCACCCCTCCCCCCCCCCCCCTCCTTATCTCC CCCAAACGAAGAAAAACGTAACGTAAGAAGAGGGAAACCTACCATTAATA ATATCACTAGTAGACTAGTTACACACTTAACAGGAGATGTAGTAGCAACA TCTGGCAAAACTTTCTCCGTCATTACCCTCCTATTATATTCCGTAGTGTT ACGGGAGAATGACTGCCAGATGAGGTTCTCTTAAAAAAATCAGCCTGTTT CCTCTACATACCACTCTCGCCAAGCAAAGCGCAGCATCTCCCCGTCGCCT CGATACCTGCCTTACAACGCCTACCCCGGGAATTCAAAAAACGCCTTCGA CTTTCACAGAAACTCCTTCCCCCTCATCCCCCGTTGAACCCAACCATGAT GTGTTAGGATACTCAATTGTTTTTTTGTGCGAAAAATAAACAGGGCGCGT TGTTTAAGAGGGTTATTACATATTTTCGTCACGAAATACCATGAGCTAAA CTATATATATATTTTTTAATGTTTTACTGCTAATTAAAGTTTTTGTAGTT CTCTTATTGTGTGTCTAATTTTCTCTTAATTTGTCTAATTTTCTCTTATT GTGTGTCGAATTTCTCACGTAGTTTCATGCGGAAAAGAAGGGGGAGGTGG TAGCAGAGAGCGCCATTATAGTGGTGGTTTGCACATTTCAGAATTGAAAA ATAGTCACTGACATGGAACTACCCCCCCCCCCCCCCCCCCCCCGGATGCC TACTTTCGAAATGGTGTCGAACTCCTGCATCAGCTTCAGCTTTGGACCGG ACAGAAGGCGAAGGTTACCGAGGTCTCGGACGAAGGCTTCAAGATCGACT GGAATCCTCCAGGGGCGGGGACAAGCTTGGTGTGTGTGTGTGTGCTTGTG TTATCGCCTAGACGAGTCATGTTGCTATTATTTTTGTCTTCACTTTTACT CCTCTTACTGTATGTTGCTTCAAAGGGTTGGGAGGGATGGCCGAAGGGCT GGCCAGAGGCAAAGGTTGCACGTCGCGTAGACGCCGTATTTGCTCCCTAA CCCCCCCCACTCCCCTTAAGAAGAGAAGTGGCTTGAATTCTGTCAGGTTG TTTTCAACGGCAAAAAATGGCGTGTCATGCGTCGGGCGCGTCCGCTTTGG GAAAAAGAGCTAGGGTTCAATCTTTGTAATTTTCATGCACCCACCCATCC AAATAATTCAAATTTAATTTGGGATTTCATCGCGAAAGTACGCAGTGATA TTCACAGATGATCCCGAGTCTCTTGACCTGGCCTCTTGTCTCCTCCCCCA CTCCCCGTCCATCCCCTCGCATATTTTTTCTCTCGCCTTGTTGTTCCCTT CTCGCGAGGCAGGTAATGGACGTGAAGGTCTTGGAGGCAGCGCCGGCGGA GTCTGTTCTCAAGGGGGCTACCTTCGCCGGAGGCTGCTTCTGGGGCCTCG AGCTGGCTTTCCAAAGGGCGCAAGGCGTCGTCTCCACCAAGGTGCTGAGG TTTTGCAATTTTTGGAAAGGCGTCGACGATCGTTGTCCACAGAGCTATTG TGGTATTAATAGTGTATCTATGCCTGCTGTATTCCTCTATATCGCTACTA ATAGTATTTCTTTCGCACTCACGAATAGGAGATATTGTGGTAATATTATT AATAATAGTATCGGGAATAAGTCCACTGGTACACTATACACTTAGACAAC CCACATCCATTCAGCAGGTGTATTTGAAATGAATTTGAATTCTCACATAA TAAGCTGATAATGTCAAAAATCCAGCCCGTGGTCACAAGGTAGAAAAAAC ACCATTCGAGAGGATATAACGTACGACGTGCTCTCCATACAAAGTGAAAG CGGAGGAAATGGTACAAACATACTCGGAAAAAGCGACATTCACGAATATA TAAATTAGAAATTGCCACATCTCTTTTTTTTTTTCCTTTTCAGTCTGTAG CAGCCATTAATAGATTCACCTGATAATCACCAGAAACGAAACTTTGTGCC TTTCCTTGTCAAATCTGTATCTGATTTGCTTGCCTCTGTTTTGGTGTACC TGCAGGGCAATTAATTGTAAGTGTACGCTATAATTGTAAGTGTACGGTAT AACGATGGGTTTCCCACCCATATTATACTGGTACTTTCAACATGCTATAA CCACGTCATACTAATAGTGGGTGTGGAAAAAGAGAGGCGAATATTAATTG GTCATAGTCCTTAGTGGCCTGCTAAAAGGCAGCACTCGTGCGAAGCTACC TTGAGGTTTAGCTGCCCTGTGCCGGGGGATTCTCGGCAGTGAACGCCATC GGTACGCAATTGCGTGACCCGATAAACTCGGGACTGACCCGATGTCGTGT GGCGGTTTCATAAGTGGACGCCGCCGCGGAACTCGGGAGGAATTCCGTAA ATGAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGA CGGGACGGCTGCACACGTCTCGCGAGACCAATTTCTCAGACACGCACGGG GACAGGGAAATATATTCCTTTTCCCTGTTCAGCTGACCACGAGCAGGATT GGCAACCTTACCAGGTTGTTTCATTCATCTGCTATATGTGATGACCATAC ATACATATAATACATACATACTGTTGACCCTATGCCACTGCCATCGGGGA ACATAACCCGATTGAATGCCATGAAGAGTTTTTGTCCATACAGCCTAAGT TCCCACCTAAACGTTTTGACAATCTTAATCTTAATATCTTAATATTAATA TCTTAATATTAATATCTTAATATTAATCTTAGTATTAATATCTTAATATT CATAGGGTGGATGTCCAGAAGGTTTAGATGGACCTATTAATAGATGGATC CTGTATAGTATACTACAGTGCAAGTACGTATAGTATGTGTAGTATTCACG GATGGCATTGCTAGCCAGGCAAGTTGATTGGTTTTCGTAATAAAGTACAG TATCATCATCGATCCCTTAAGAACAACACCCCTTGGTATTAATAGGATCA ATGCGAGTGGCATAGAATGACTGGGATGGCAGGGTCGGATTGCGCGGTTA TCTGCAATTTAATGAGAAAACACACACACACACACACACACACACACACA TTGCGTGGTCAGCCGGTTTGGTTTGTGTAGTTTTTACTAATAAATACAAG CACAAACCGCAAAACAAATGCTGGAGAATCCTAACAATAAAAACAGCAGA ACGAGTAGTACCCGAGCTAAATACTATTAAAGATATTTCATAGATGATGG TTTTCTCCTTTCTATACATGTTTGTGTGTGTGTATGTTTTTTTATATTTT GACGCCATCTCAGGTGGGTTACGCACAGGGAGACGTGAAGCGGCCGTCCT ACAGCGACGTCTGCACCGGGAGGACCGGCCACACCGAGTCCGTACGGGTG GGTGCGGGGCGTATCATATATATATATATATATCATATTTAACGTTGATA ATACGATAGCATCGTTTTCTACAGTACAAGGAGAGCTGTACAGTCTGTAG TCTTGTATGGACTGTAGAATCTTAAATGCACGAAAATAGCAGGGGGGGGG GTCAAATCTGTCCCCGAATCGAGACTGGGACGATCTAAAAGCTACCCCTT CCGGAGGGAAAGTTTGGGAACCTCCCTGGTGAAATACGTCATGTTCGGTA CATATTAATGCCCTTTTCTTACAGGTTAATTGCGGTGGGTTATACAAGGC AGTTCCACCCACCCTCCGAACGAATTCGGGCGATGTGGGGGGAGTCACTG ACTGATTGTGCTGATTGTGGTTCGGTACATGTTGATGCCCGGGCGAGATG AGGGGGCGAAATATGTCATGTTCGGTAAATAATAATGCCCGGGCGAGGTG GGGGGGCGAAATATGTCATGTTCGGTACATAATAATGCCCGGGCGAGGTG GGGGGGCGAAATATGTCATGTTCGGTATGTATATTAATGCCCGGGCGAGG TGGGGGAAGCTACTGACTGATTGTACTGAGTGTGGTTCGGTGATGGTGCA CCATGAATGACAAAGCTACATCGGGGGGGCTCGGCCCCGAGTTCACCCCA GGGCTGCCGCGATTGTAATTAACGATGTGGTTCCCTTTCCGTTTTACATT GAATGACGTATCCCATATTGGCCAGCCCACAGAGTATATACGAATGACGT GGCCAACCATACTAAAACCCAGATAATACAACTCTCCCTTAAAAAAAATA AAATTCATCCACTAAAGTAAAAACACCGGGATTTGAACCCGCGATGTAGC TTTCTCATTGATATTATAGTACATTGCCACACCGAAAACCCCTCATGTCA GCGCTGACTGAGTGACAACGCAAGTTAACAGCACGCGTGTTGGTCCTTTG CCTACGGGTAAAATGGGGTGGGTTGTTGCAGCAAGTTCCATCCTATGTAG AGATGCTGTCTTTGCCTCTTCCTCGCTGAAGCCGGGGACAGGTTTGTAAC CCCCCCCCCCCAACCCGGGCCATTTCGCCTCAGAGATACAGGCCCTATTA CCTGTAAAAATTCGTTTTATATGTCTGTGTATGTGTGGGACGAGGGCCAG GGGGGGTTAGAGGACCGGCTGCTAAAGAAGTATGATAGTACCGCCCACGT CCGGACGAGAAAGCACACTCTATTAATACTATTAATACTAATACTGTAAC TCATTCCGTTTCTACCTCGGGCCGGCCGCCGTCACCTCCTTCTCCTCCTC CTCCTCCTCCTCCACCTCCGCAGGTTCTCTACGATCCATCGGAGACGACG TTCCAGAATCTTCTAAGAACTTTCTTCGACAGGCACGACCCGACGCAGGC GAACGGCCAGGGTAACGACAGGGGCACCCAGTACCGGGCGGGCGTGTATT TCCATGACGATGACCAGGTTAGGCGCAAATCTCGTGGGAGGCTTTTTGAT TGAGGGGTTGTAGGTTGTAGTACTACTGCCTGTTTTTTTTTTTAAATTCA AAGCGTTTTTAAAGAAAGATCTGAACGCATCTATAGACCTTCTGAGCATA TCCCACACAGGGGGGAAAAATGCATGGCATTTAAACGGGTTCCTCGATGG TAGCCATATTCTATTTAAGGGCATCTGAGGGGATCGTATGGGTAAAAAAT GGTGTACGTGCCACCGCGGTCGATCCGTCGTTCTCGAAACAAGCGAGATA CGAGTTCGGTTTGTCTATACTCTGGCGCTTTCCAAAAATATTAGAGCCTC GAGAACCAGACTGGCGCGGCTTCTTGTCAAGGTTCTAATCCAATCACTAA ACCACTCGCTCACGGGAGCGACGAAAGCTATGAGAGTCTGGACCTGGGGT TCGATCCCACGTGTGTTGATCCTCCTTATGAGCGGAGAAGATAAGGAAAT GTATCTTATCTAAAAGAAACTCCAGTGAATGAATTGACGGCCCCGGGGCA ATAATGCCAACAAGGGTGGAAACAGCGATATCAGGGGTTTCAAGCCCCGC CAGCTTTTGTCCTTTTGTTAAGGTTATATAATTAAACCACTGACTGACCT CTGTCCCCTCCCCCTCCAACCTGCCTCCCCCCCCCCCCCCCCGGATCCCC TCCCCATCCCATCCTAATCCTTTGATTATCCTTCCTCATCTTCTCCCCCC ATTATATTACCTCCCCTCGTCATCCCCTCGCGCGATGTGCAGAAAAAAAT AGCGGAGGCGTTCTTCGAGGAGGAAAAATCTAGGCTCGGCCTCAAGAAAA TCGTGACGGAGCTCGAAGAGGTGAAGGACTTCTACGATGCCGAGGAAGAG CACCAGCAGGTACGCTTTCTGCAGTACAGTAATCGAGGTCTTGTTGCCAC CTCCATGTAATATGTTCAATGTCGTGTATCAAGGTATCTTTTCCACAGAA ATGTGGCCCGCACCTGGCGAAAGCCCCCGCTCCCTTACCGAATAAAAATG ACACCTTTTTTCGAAGACTAATATTGTATAGTATAGTATAGTATAGTATA GTATAGTATAGTATAGTACTGAAACCGCGTTGGCCAGCTGTCCTAGCGCC ACCCCCGCTCCCTCAATTTCCCTTTCTTTCCCTCCCATTCCCTTCCCTCC CCCCCCCCTGTGGTGGCGGCGGCGCTGCCCGCTGTTTATTTCGGCGTCCT GTCGTTGGAATGTCTTTGGAATGTATTCGAATGTCTTGTTGGAATGCCTG TGGAATGTATTCGAACCGTCTTTGGAATGTCTTTGGAATGTCGTTGGAAT GTTGTTTGAATGTCGTTTGAATGTCGTTGGAATGTCTTTGGAATATATTT GGAATGTCGTTGGAATGCCGTTGGAATGGTGATGTGACAGTACTTGCAAA AGGGAGGTCAGGACGCTAAAAAACAAGCCACCGAGACTATTCGATGTTAC GGATGATAGCTACATCATTAGGGAGGAACGGATTAGGACACTAGTACCTC GTACTTCTACTAGCCTACGCCATGTTGTGAAAGAGATTCGTCCCAGACAG GAGAGAGGTGATTACACCTACCTGGTACCTAATAACCCGTTTCGTTTTTT TGTTTTGTTTTGTTTTGCTCTGAGGAGTAAGTAACTGAAGCGTATATTTT GTGCATAAATACTACAGCTAGTGTGTGGTTTATTTATTTATTCGTTCGAC TGAAATGATCTCTTGACTACAGTAGTTTTGTTTTTGTTTTTGTTTTTTGT TAGTAACCACGATTTATTTTGTTGTTGAAGACGACCCGAGCTCAAGTAGG GGACCAACGTGCTCGATTGCCCGTGGGTCTATCGGCGATGGACTTGATCA CGCATCAGCGCCCTGCTGTGAGAACGTTTTCTTGTTACACCAGATCATCC TGTTGCTGGATTTTTGTATATCATCTCTTGTCTTTCCCCCCCTCAAGTCC CACGTTTTTATATATGAAGTAGCCACGTTTTTGTTCGCGCGTGACGTAAG GCACGGGTTTTTGATGCGAAAGAGGCCAAC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1312:146461..161390+

>mRNA_F-serratus_M_contig1312.2340.1 ID=mRNA_F-serratus_M_contig1312.2340.1|Name=mRNA_F-serratus_M_contig1312.2340.1|organism=Fucus serratus male|type=CDS|length=1824bp|location=Sequence derived from alignment at F-serratus_M_contig1312:146461..161390+ (Fucus serratus male)
ATGGTGGCGGCGGGACAGGTTGCGAGCGTGGAGTACTCGGTCAGGCTGGA
GGACGGCTCGCCGTACGAGACTCGCTTCGACCAGATGGTGGCGGCGGGAC
AGGTTGCGAGCGTGGAGTACTCGGTCAGGCTGGAGGACGGCTCGCCGTAC
GAGACTCGCTTCGACCAGGGACGTGTACGGCTTTTGGTGGACGGGGGAGG
CTTTGCGCCATTTCTCCACCGAGCGGTGCTTCAAATGGAGCCCGGCGAGG
AGAAGGTGGTGACCGTTCCTCCCAAGGAAGCCTTCGGCGAATGGACGTGT
ACGGCTTTTGGTGGACGGGGGAGGCTTTGCGCCATTTCTCCACCGAGCGG
TGCTTCAAATGGAGCCCGGCGAGGAGAAGGTGGTGACCGTTCCTCCCAAG
GAAGCCTTCGGCGAATATGACCCCGCAAAGACGGCGACCCTGCCAAAGGA
TTCGGCGCCAGGGGAGATGAGCGTCGGGTCGGTGATGACCCCGCAAAGAC
GGCGACCCTGCCAAAGGATTCGGCGCCAGGGGAGATGAGCGTCGGGTCGG
TGCTTCAGCTTTGGACCGGACAGAAGGCGAAGGTTACCGAGGTCTCGGAC
GAAGGCTTCAAGATCGACTGGAATCCTCCAGGGGCGGGGACAAGCTTGCT
TCAGCTTTGGACCGGACAGAAGGCGAAGGTTACCGAGGTCTCGGACGAAG
GCTTCAAGATCGACTGGAATCCTCCAGGGGCGGGGACAAGCTTGGTAATG
GACGTGAAGGTCTTGGAGGCAGCGCCGGCGGAGTCTGTTCTCAAGGGGGC
TACCTTCGCCGGAGGCTGCTTCTGGGGCCTCGAGCTGGCTTTCCAAAGGG
CGCAAGGCGTCGTCTCCACCAAGGTAATGGACGTGAAGGTCTTGGAGGCA
GCGCCGGCGGAGTCTGTTCTCAAGGGGGCTACCTTCGCCGGAGGCTGCTT
CTGGGGCCTCGAGCTGGCTTTCCAAAGGGCGCAAGGCGTCGTCTCCACCA
AGGTGGGTTACGCACAGGGAGACGTGAAGCGGCCGTCCTACAGCGACGTC
TGCACCGGGAGGACCGGCCACACCGAGTCCGTACGGGTGGGTTACGCACA
GGGAGACGTGAAGCGGCCGTCCTACAGCGACGTCTGCACCGGGAGGACCG
GCCACACCGAGTCCGTACGGGTTCTCTACGATCCATCGGAGACGACGTTC
CAGAATCTTCTAAGAACTTTCTTCGACAGGCACGACCCGACGCAGGCGAA
CGGCCAGGGTAACGACAGGGGCACCCAGTACCGGGCGGGCGTGTATTTCC
ATGACGATGACCAGGTTCTCTACGATCCATCGGAGACGACGTTCCAGAAT
CTTCTAAGAACTTTCTTCGACAGGCACGACCCGACGCAGGCGAACGGCCA
GGGTAACGACAGGGGCACCCAGTACCGGGCGGGCGTGTATTTCCATGACG
ATGACCAGAAAAAAATAGCGGAGGCGTTCTTCGAGGAGGAAAAATCTAGG
CTCGGCCTCAAGAAAATCGTGACGGAGCTCGAAGAGGTGAAGGACTTCTA
CGATGCCGAGGAAGAGCACCAGCAGAAAAAAATAGCGGAGGCGTTCTTCG
AGGAGGAAAAATCTAGGCTCGGCCTCAAGAAAATCGTGACGGAGCTCGAA
GAGGTGAAGGACTTCTACGATGCCGAGGAAGAGCACCAGCAGTACTTGCA
AAAGGGAGGTCAGGACGCTAAAAAACAAGCCACCGAGACTATTCGATGTT
ACGGATGATACTTGCAAAAGGGAGGTCAGGACGCTAAAAAACAAGCCACC
GAGACTATTCGATGTTACGGATGA
back to top