mRNA_F-serratus_M_contig131.2322.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.650e-14 Identity = 43/79 (54.43%), Postives = 60/79 (75.95%), Query Frame = 2
Query: 1898 AGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLVEIERVRLLLVNARADKAWRRRGFLVLCRAFPER 2134
AG++ AAE V+ LL++G+DET+ + G A DM G+ VE E+R ++ERVR LL NA AD+AWRRRG+L++CRA P+R
Sbjct: 254 AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDR 332
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 7.360e-14 Identity = 81/302 (26.82%), Postives = 114/302 (37.75%), Query Frame = 2
Query: 1298 AGRANVDALDSDGRTPLHWAVDVGHLAATQALLAAGADATLRH------------------------VICYGVDVNAAGISGVTALHQAVRKNQVGSINILINAXANLHALDHRGRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVAIAGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSL--VEIERVRLLLVNARADKAWRRRGFLVLCRAF 2125
AG A + LD+ GRTPLH AV+ GHL+ +ALLAA D ++R+ ++ +GVDVN G T+LH A N+V +I++L+ A A++ D P A AG++ VD+LL+ G+DET ++ G+ AA++ G +E L ++ERVR LL NA D+AWRRRGFLVLCRAF
Sbjct: 59 AGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRR-TDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLII------------------------------------------------------------------AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAF 293
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.980e-12 Identity = 80/299 (26.76%), Postives = 111/299 (37.12%), Query Frame = 2
Query: 1307 ANVDALDSDGRTPLHWAVDVGHLAATQALLAAGADAT------------------------LRHVICYGVDVNAAGISGVTALHQAVRKNQVGSINILINAXANLHALDHRGRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVAIAGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSL--VEIERVRLLLVNARADKAWRRRGFLVLCRAF 2125
A + LD+ GRTPLH AV+ GHL+ +ALLAA D + LR ++ +GVDVN G T+LH A N+V +I++L+ A A++ D P A AG++ VD+LL+ G+DET ++ G+ AA++ G +E L ++ERVR LL NA AD+AWRRRG LVLCRAF
Sbjct: 111 AKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRR-TDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLII------------------------------------------------------------------AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAF 342
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 3.250e-12 Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 2
Query: 1886 AVAIAGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLVEIERVRLLLVNARADKAWRRRGFLVLCRAFPER 2134
A A+AG + E VD LL+SG+DET++D+ G+ A DM V S + +RVR LLVNA+AD+AW RR +LVLCR P+R
Sbjct: 91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR 173
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 1.980e-10 Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 2
Query: 1898 AGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLVEIERVRLLLVNARADKAWRRRGFLVLCRAFPER 2134
AGK+ E VD+LL+ G+DET V G AAD G +V E+R E E VR LL NA AD+AWRRR LVLCRA P++
Sbjct: 273 AGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDK 351
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: D7FQ25_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ25_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 2.190e-10 Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 7 GVDVNASGKSGMTALHHAAVNNKAGMVEILLEAGANKDAMDCEGRTPLLVAAKKSYLHVVNILLAAGADATLHCGRADSSAVGWAAYNGNLKMLKAIVEHGVHVDSANATG 339
GVDVNA+G +G TALH AA+ ++A MV +L GA KD+++ +G TPL +AA + + LL GADA SSA+ A G +++ I+EHG+ V+ ++ G
Sbjct: 208 GVDVNAAGPNGNTALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGEGNIAATQALLDVGADAGSRSEGEASSALDCAVCQGYTDVVRVIIEHGIDVNISDVDG 318
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 1.170e-9 Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 2
Query: 1892 AIAGKKH-AAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLVEIERVRLLLVNARADKAWRRRGFLVLCRAFPER 2134
A G++H +A+ VD+LL+ G+DET+V G+ AAD G R + ER R LL A AD+AWRRRG LVLCRA P+R
Sbjct: 281 AAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTR-RCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDR 361
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 2.730e-9 Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 2
Query: 1892 AIAGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLVEIERVRLLLVNARADKAWRRRGFLVLCRA 2122
A AG AE VD+LL+ G+DET V G AADM + E + +++RVR LL A AD+AWRRRGFL+L RA
Sbjct: 631 AKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 3.240e-9 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 2
Query: 1886 AVAIAGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLV-EIERVRLLLVNARADKAWRRRGFLVLCRAFPER 2134
A + AG++ +AE VD+LL+ G+DET D GQ AD G +E+ + L E+ V LL NA AD+AWRRRG LVLCRA+ R
Sbjct: 268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRR 351
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 1.040e-8 Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 2
Query: 1895 IAGKKHAAECVDVLLQSGSDETVVDNLGQIAADMAGQRVEVEERSLV----EIERVRLLLVNA---RADKAWRRRGFLVLCRAFPER 2134
+A +K VDVLLQ+G+DET V++ GQ D+ G + + + E + +R LLVNA RA++AW RRGF VLCRAFPER
Sbjct: 351 LAAEKSFRVKVDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDAIRTLLVNAPKDRANRAWSRRGFFVLCRAFPER 437 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig131.2322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig131.2322.1 >prot_F-serratus_M_contig131.2322.1 ID=prot_F-serratus_M_contig131.2322.1|Name=mRNA_F-serratus_M_contig131.2322.1|organism=Fucus serratus male|type=polypeptide|length=393bp MTALHHAAVNNKAGMVEILLEAGANKDAMDCEGRTPLLVAAKKSYLHVVNback to top mRNA from alignment at F-serratus_M_contig131:236280..238582- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig131.2322.1 ID=mRNA_F-serratus_M_contig131.2322.1|Name=mRNA_F-serratus_M_contig131.2322.1|organism=Fucus serratus male|type=mRNA|length=2303bp|location=Sequence derived from alignment at F-serratus_M_contig131:236280..238582- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig131:236280..238582- >mRNA_F-serratus_M_contig131.2322.1 ID=mRNA_F-serratus_M_contig131.2322.1|Name=mRNA_F-serratus_M_contig131.2322.1|organism=Fucus serratus male|type=CDS|length=2358bp|location=Sequence derived from alignment at F-serratus_M_contig131:236280..238582- (Fucus serratus male)back to top |