mRNA_F-serratus_M_contig130.2258.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig130.2258.1
Unique NamemRNA_F-serratus_M_contig130.2258.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: D8LS42_ECTSI (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS42_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 5.640e-115
Identity = 192/283 (67.84%), Postives = 216/283 (76.33%), Query Frame = 2 
Query:   29 ARTLAFLLVLVSSLCGCRAFHVVPFNRYPSRPSPTSIQRRLSPRCGHGFG---RPR---PLVPLPPRVAGDPPSSENSDGQGSEGXXXXXXRDEGSGLFGGLREWWKKEAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGTNEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 859
            AR LA LLVL S +   RAF  +       R + TS  R    R  H  G   R R   P+V LPPRV   P    +  G G +GXXXXX      G+FGG++EWW+++ KSDL +YGTSLA+AL +R+VALEPR+IPSLSMFPTFE+GDQLAVDKLS+KLSRPYQRKDVVVFYPPP F EFS RG  +ALIKRVIAV GD VQIK GSLFVNG+EQFE YTFEEPEYSWGPQT+PEGMVMVLGDNRNHSLDSHIWGFLP ENVIGRAIFKYWPPWRAG +E+
Sbjct:   16 ARALAGLLVLSSLVQLSRAFGGIS-----GRTTATSTARTSGWRQHHAHGGGVRHRSLSPIVGLPPRV---PHGLRSEAGDGGQGXXXXX------GIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 284
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: A0A6H5KUG3_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG3_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 7.210e-112
Identity = 168/220 (76.36%), Postives = 189/220 (85.91%), Query Frame = 2 
Query:  200 LPPRVAGDPPSSENSDGQGSEGXXXXXXRDEGSGLFGGLREWWKKEAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGTNEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 859
            +PPRV   P    +  G G +GXXXXX      G+FGG++EWW+++ KSDL +YGTSLA+AL +R+VALEPR+IPSLSMFPTFE+GDQLAVDKLS+KLSRPYQRKDVVVFYPPP F EFS RG  +ALIKRVIAV GD VQIK GSLFVNG+EQFE YTFEEPEYSWGPQT+PEGMVMVLGDNRNHSLDSHIWGFLP ENVIGRAIFKYWPPWRAG +E+
Sbjct:    1 MPPRV---PHGLRSEAGDGGQGXXXXX------GIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDVVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 211
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: A0A6T5N089_HETAK (Mitochondrial inner membrane protease subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N089_HETAK)

HSP 1 Score: 259 bits (661), Expect = 8.380e-79
Identity = 127/190 (66.84%), Postives = 153/190 (80.53%), Query Frame = 2 
Query:  290 EGSGLFGGLREWWK-KEAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGTNEALIKRVIAVDGDNVQIK-GGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLV 853
            E S    GL  W + +E K DL +YGTSLAVAL +RT  +EPR+IPSLSM+PTF++GDQLAVDKLS K++RPYQR+DVVVF PP AF  FS R   EALIKRV+AV GD V+IK GG LF+NG++Q E+YT E+  Y WGPQT+P+G V+VLGDNRNHSLD H+WGFLP EN+IGRA+FKYWPPWRAG +
Sbjct:   81 ESSNPLAGLINWAQSEEGKEDLRIYGTSLAVALVLRTFVVEPRWIPSLSMYPTFDIGDQLAVDKLS-KVARPYQRRDVVVFTPPDAFSIFSDR-RGEALIKRVVAVAGDVVEIKDGGHLFINGEKQEEKYTNEDALYEWGPQTVPKGCVLVLGDNRNHSLDGHVWGFLPTENIIGRAVFKYWPPWRAGGI 268
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: A0A836CAW9_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW9_9STRA)

HSP 1 Score: 244 bits (623), Expect = 6.840e-75
Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 2 
Query:  404 LEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGTNEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVE 856
            +EPRYIPSLSMFPTFEVGDQLAV+K++ +  RPY R DVVVFYPP AF  FS RGT+EALIKR++AV+GD VQI+GG +++NG+ Q E +  ++PEY WGP  +P G VMVLGDNRNHSLDSHIWGFLPRENVIGRA+FKYWPPWRAG VE
Sbjct:    1 MEPRYIPSLSMFPTFEVGDQLAVEKVT-RYYRPYSRHDVVVFYPPEAFSLFSARGTDEALIKRIVAVEGDTVQIRGGKVYLNGQAQDEPFVTDKPEYEWGPMVVPAGKVMVLGDNRNHSLDSHIWGFLPRENVIGRAVFKYWPPWRAGAVE 150
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: A0A7S2S8J5_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J5_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.530e-69
Identity = 114/184 (61.96%), Postives = 142/184 (77.17%), Query Frame = 2 
Query:  317 REWWKKE-AKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGTN-EALIKRVIAVDGDNVQIK-GGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES 859
            + WW  E  ++++  Y  SL +AL  R   +EPR+IPSLSMFPTF+VGDQLAVDK+S K+ RPY+R DVVVF PP AF +    GT  EALIKRV+AV GD V++K GG+L+VNG  Q E +T E+  Y WGP+ +P GM+MVLGDNRNHSLDSH+WGFLP+ENVIGRA+FKYWP WR GL+E+
Sbjct:   79 QRWWADEDLRAEVKSYTVSLGLALLFRAFIVEPRFIPSLSMFPTFDVGDQLAVDKIS-KVVRPYERNDVVVFTPPQAFFDVMGSGTKKEALIKRVVAVAGDVVEMKDGGTLYVNGVPQPEGFTNEKAFYDWGPREVPAGMLMVLGDNRNHSLDSHVWGFLPKENVIGRAVFKYWPVWRLGLIET 261
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: B8BZJ0_THAPS (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ0_THAPS)

HSP 1 Score: 230 bits (586), Expect = 6.300e-69
Identity = 109/180 (60.56%), Postives = 135/180 (75.00%), Query Frame = 2 
Query:  320 EWWKK-EAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEF---STRGTNEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAG 847
            EW+   E K D+  Y  SL VAL +R + +EPRYIPSLSMFPTFEVGDQLAV+K++ ++ RP+ R +VVVF+PP  F E    ++R   EALIKR++A +GD V++ GG LFVNG EQ E +T E+ EY +GP  +P G V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWR G
Sbjct:    1 EWFASDEGKEDVKTYTVSLGVALLLRLLIIEPRYIPSLSMFPTFEVGDQLAVEKVTKRI-RPFSRNEVVVFHPPMKFREIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAEYDFGPVVVPPGNVLVLGDNRNHSLDGHIWGFLPTENVIGRAVFVYWPPWRCG 179
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: K0S0N9_THAOC (Mitochondrial inner membrane protease subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N9_THAOC)

HSP 1 Score: 232 bits (592), Expect = 2.200e-68
Identity = 109/188 (57.98%), Postives = 140/188 (74.47%), Query Frame = 2 
Query:  302 LFGGLREWW-KKEAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEF---STRGTNEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLV 853
             F  ++EW+  +E K D+  Y TSL +AL +R + +EPRYIPSLSM+PTFEVGDQLAV+K++ ++ RP  R +VVVF PP +F E    ++R   EALIKR++A +GD V++ GG LFVNGKEQ E +T E+ +Y +GP  +P G V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWR G  
Sbjct:   97 FFEQVQEWFASEEGKEDVRTYTTSLGIALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRI-RPLNRNEVVVFNPPTSFKEIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGKEQDEPFTAEDAQYEFGPVLVPAGEVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVGTT 283
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: A0A6V1AJW1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AJW1_9STRA)

HSP 1 Score: 229 bits (583), Expect = 4.670e-67
Identity = 111/187 (59.36%), Postives = 141/187 (75.40%), Query Frame = 2 
Query:  302 LFGGLREWWKK-EAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEF---STRGTNEALIKRVIAVDGDNVQIK-GGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAG 847
             F  ++EW+   E K D+  Y  SL+VAL +R + +EPRYIPSLSM+PTFEVGDQLAV+K++ ++ RP+ R +VVVF PP  F E    S+R + EALIKR++AV+GD V++K GG LFVNG +Q E +T E+ EY +GP  +P G V+VLGDNRNHSLD HIWGFLP ENVIGRA+F YWPPWR G
Sbjct:   96 FFEQIQEWFASDEGKEDVKTYTVSLSVALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRI-RPFNRNEVVVFNPPERFRELVGESSRKSKEALIKRIVAVEGDTVEVKMGGKLFVNGVQQDEPFTAEDAEYEFGPVIVPPGDVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVG 281
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: K8YRM0_NANGC (Mitochondrial inner membrane protease subunit n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRM0_NANGC)

HSP 1 Score: 228 bits (580), Expect = 1.600e-66
Identity = 136/289 (47.06%), Postives = 171/289 (59.17%), Query Frame = 2 
Query:   35 TLAFLLVLV------SSLCGCRAFHVVPFNRYPSRPSPTSIQRRLSPRCGHGFGRPRPLVPLPPRVAGDPPSSENSDGQGSEGXXXXXXRDEGSGLFGGLREWWKK-EAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGT--------NEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVE 856
            T+AF+++L       SSLC       V   R   + S TS+         +G GR RP  P PP     PP   +  G   EG        E   L    + ++   E + D  ++ TS  ++L IR   +EPRYIPSLSM+PTF VGDQLAV+K++ K  + Y+R DVVVF P   + E+ +R          NEALIKR+IA  GD V++K G LFVNG  Q E+Y  E P Y WGP+ +P+GM MVLGDNRNHSLDSHIWGFLP+EN+IGRAI KYWPPWR GLVE
Sbjct:   12 TIAFIIILSPVFAFKSSLCTRGLSSYVAVGRLCPKSSITSLS--------NGNGR-RP--PFPPSRTIFPPLFASDSGNSGEGKEEEEGGAEEGSLLDKAKSFFSDPENRKDTTLFVTSFLISLGIRAFIVEPRYIPSLSMYPTFLVGDQLAVEKVT-KTYKNYERGDVVVFNPTQGYQEYVSRDPYITDKSRINEALIKRIIAKGGDVVEVKDGQLFVNGVAQEEKYIAEGPAYVWGPRRVPDGMYMVLGDNRNHSLDSHIWGFLPKENIIGRAICKYWPPWRLGLVE 288
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BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Match: A0A7J7IBZ0_9RHOD (Mitochondrial inner membrane protease subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBZ0_9RHOD)

HSP 1 Score: 225 bits (573), Expect = 3.950e-66
Identity = 108/200 (54.00%), Postives = 135/200 (67.50%), Query Frame = 2 
Query:  317 REWWKK----EAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVGDQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTR----------------GTNEALIKRVIAVDGDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNHSLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVE 856
            R WW +    E  SD+ V+  S A A+ +R   +EPRYIPSLSMFPTFE+GDQL VDK + KL R  +R DVVVFYPPPA +E S                  G  +A+IKRV+AV GD V ++ G L+VNG+ Q E Y  E+P+Y WGP  +PEG ++VLGDNR++SLDSHIWGFLP  NVIGRA+F+YWP  R GL+E
Sbjct:   46 RRWWHRLLYDEQFSDVRVFTASFAAAVLLRVFVIEPRYIPSLSMFPTFEIGDQLFVDKATQKLGRHIERGDVVVFYPPPALIEASKMTAQALNAAGEKDVHQYGAKDAMIKRVVAVAGDTVAVRDGRLYVNGEAQIEPYVTEQPDYRWGPVQVPEGCLVVLGDNRSNSLDSHIWGFLPERNVIGRAVFRYWPITRMGLIE 245
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS42_ECTSI5.640e-11567.84Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A6H5KUG3_9PHAE7.210e-11276.36Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A6T5N089_HETAK8.380e-7966.84Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A836CAW9_9STRA6.840e-7572.85Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S2S8J5_9STRA1.530e-6961.96Mitochondrial inner membrane protease subunit n=1 ... [more]
B8BZJ0_THAPS6.300e-6960.56Mitochondrial inner membrane protease subunit (Fra... [more]
K0S0N9_THAOC2.200e-6857.98Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A6V1AJW1_9STRA4.670e-6759.36Mitochondrial inner membrane protease subunit n=1 ... [more]
K8YRM0_NANGC1.600e-6647.06Mitochondrial inner membrane protease subunit n=3 ... [more]
A0A7J7IBZ0_9RHOD3.950e-6654.00Mitochondrial inner membrane protease subunit n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:607846..611733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.4
Seed ortholog evalue5.1e-95
Seed eggNOG ortholog2880.D8LS42
Preferred nameTPP1
KEGG koko:K03100
KEGG Pathwayko02024,ko03060,map02024,map03060
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0010467,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0019538,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034641,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0051604,GO:0055035,GO:0061024,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.serine-type peptidase activity
EggNOG OGsCOG0681@1,KOG0171@2759
Ec32 ortholog descriptionSignal peptidase I (SPase I) (Leader peptidase I)
Ec32 orthologEc-12_004880.1
EC3.4.21.89
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons4
Model size1765
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2258.1prot_F-serratus_M_contig130.2258.1Fucus serratus malepolypeptideF-serratus_M_contig130 607853..610830 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929256.3806713-UTR-F-serratus_M_contig130:607845..6078521622929256.3806713-UTR-F-serratus_M_contig130:607845..607852Fucus serratus maleUTRF-serratus_M_contig130 607846..607852 +
1690962771.5216162-UTR-F-serratus_M_contig130:607845..6078521690962771.5216162-UTR-F-serratus_M_contig130:607845..607852Fucus serratus maleUTRF-serratus_M_contig130 607846..607852 +
1622929256.45474-UTR-F-serratus_M_contig130:610830..6117331622929256.45474-UTR-F-serratus_M_contig130:610830..611733Fucus serratus maleUTRF-serratus_M_contig130 610831..611733 +
1690962771.562049-UTR-F-serratus_M_contig130:610830..6117331690962771.562049-UTR-F-serratus_M_contig130:610830..611733Fucus serratus maleUTRF-serratus_M_contig130 610831..611733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929256.397299-CDS-F-serratus_M_contig130:607852..6081561622929256.397299-CDS-F-serratus_M_contig130:607852..608156Fucus serratus maleCDSF-serratus_M_contig130 607853..608156 +
1690962771.5322444-CDS-F-serratus_M_contig130:607852..6081561690962771.5322444-CDS-F-serratus_M_contig130:607852..608156Fucus serratus maleCDSF-serratus_M_contig130 607853..608156 +
1622929256.4096017-CDS-F-serratus_M_contig130:609539..6098051622929256.4096017-CDS-F-serratus_M_contig130:609539..609805Fucus serratus maleCDSF-serratus_M_contig130 609540..609805 +
1690962771.5397809-CDS-F-serratus_M_contig130:609539..6098051690962771.5397809-CDS-F-serratus_M_contig130:609539..609805Fucus serratus maleCDSF-serratus_M_contig130 609540..609805 +
1622929256.4257493-CDS-F-serratus_M_contig130:610159..6102641622929256.4257493-CDS-F-serratus_M_contig130:610159..610264Fucus serratus maleCDSF-serratus_M_contig130 610160..610264 +
1690962771.5472214-CDS-F-serratus_M_contig130:610159..6102641690962771.5472214-CDS-F-serratus_M_contig130:610159..610264Fucus serratus maleCDSF-serratus_M_contig130 610160..610264 +
1622929256.441534-CDS-F-serratus_M_contig130:610650..6108301622929256.441534-CDS-F-serratus_M_contig130:610650..610830Fucus serratus maleCDSF-serratus_M_contig130 610651..610830 +
1690962771.554718-CDS-F-serratus_M_contig130:610650..6108301690962771.554718-CDS-F-serratus_M_contig130:610650..610830Fucus serratus maleCDSF-serratus_M_contig130 610651..610830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig130.2258.1

>prot_F-serratus_M_contig130.2258.1 ID=prot_F-serratus_M_contig130.2258.1|Name=mRNA_F-serratus_M_contig130.2258.1|organism=Fucus serratus male|type=polypeptide|length=285bp
MAAGRSCARTLAFLLVLVSSLCGCRAFHVVPFNRYPSRPSPTSIQRRLSP
RCGHGFGRPRPLVPLPPRVAGDPPSSENSDGQGSEGGGSGGGRDEGSGLF
GGLREWWKKEAKSDLMVYGTSLAVALTIRTVALEPRYIPSLSMFPTFEVG
DQLAVDKLSAKLSRPYQRKDVVVFYPPPAFLEFSTRGTNEALIKRVIAVD
GDNVQIKGGSLFVNGKEQFEQYTFEEPEYSWGPQTIPEGMVMVLGDNRNH
SLDSHIWGFLPRENVIGRAIFKYWPPWRAGLVES*
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mRNA from alignment at F-serratus_M_contig130:607846..611733+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig130.2258.1 ID=mRNA_F-serratus_M_contig130.2258.1|Name=mRNA_F-serratus_M_contig130.2258.1|organism=Fucus serratus male|type=mRNA|length=3888bp|location=Sequence derived from alignment at F-serratus_M_contig130:607846..611733+ (Fucus serratus male)
CGAAGCCATGGCTGCTGGACGTTCATGCGCTCGTACCTTGGCATTTCTAC
TGGTACTAGTTTCGTCGCTCTGTGGATGCCGAGCCTTTCATGTAGTCCCA
TTCAACCGATATCCTTCCAGGCCGTCGCCAACTTCTATCCAGAGGAGATT
GTCACCTCGATGTGGGCACGGCTTTGGCCGGCCTCGACCGCTCGTTCCCT
TACCACCAAGGGTAGCTGGTGACCCGCCATCATCGGAAAATAGCGATGGT
CAGGGAAGTGAAGGAGGAGGAAGTGGAGGTGGACGGGATGAAGGGTCTGG
TTTATTTGGAGGTACGAAAAAGATATATGCAGCGCATCTTGGTACAGTTT
AAAGAAAATCAGAACAGCACCTAGACACTTTTGAGCATAGGTGTACTCGA
TCCATAACTGCACACATCATGAACACTCACTGTACGCAAAGCTACATACC
GTCGCTCGTAGGTGCGACACATACATCCGCACCTGAGATCTCCCTCTCTT
CCCACTTTTCCTCGATAATACACAGCAATATATGTACTTTGTAAGGCGGG
AAACGACGTCGTTGGGAAGATTTAGCGAAGAAACGAAATCCAAGTCAATT
TTCTCACCTACTTTTCCTGATCAACGCTCAAGTAAAGTAGTACTTTAACG
TTTAAACTTCGTAGGACGTGAAGCGACGTCTTTGCGAAGATTCAGGGAAG
AAATAAATTTCAAGTCACTCCCTGCTTCTAGAGATCTCGCCGTAACCAGT
AGTTGCCCAATGACCTGGACCGGAGAAATGCAGGATGCCTTTGCCATGGG
GTGGCAGTATCCGTGCCACTACTACCGTTTTAGCGCAGGATATTGATGGG
AACCGCCTCCTAGTTGCCGACAGGACGACGGGTGTCACAAGATATCGCCA
TTGTGACGATTGGCAGCGTCCGCGTCGAGGGTTATGTATGGTCACACATA
CAACAAGGGTACGGATCAACCGGGTAAGGTTGCCAGTCCTGCACGTGGTC
AGCTGAACAGGAAAAATGAATATTTCCCTGTCCGTGTTGGTGCCTGAGAA
TTTGGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTC
ATCTCCATACTCAGGCTGAATCTGGTGCTTATTTACGGGATTCCTACCGA
GTTTCCGCGGCGGCGTCCATATATTTATATTAAACCGCCATACACCATCG
GGTACGAGTTTATCGGGTCACGCAATTTTGTACCGATGGCGTTCACTGCC
GAGGGTCCGCCGGCACGGGGCCAGTAAACCTCAAGGTTGCTCCGAACGAG
TGCTGCCTTGGCAGGTCACCATGGACCGATTAATATTCGCCTCTCTTTCC
CACACCCACTATTGATATAAAGTAGGCATGTTGAAATGTATCATGTTAAT
TGGCTCGCACTCCCCTCACAAGTTGAACCCCACTCCATGTTGCGCCACGT
TCACGTTACATTACCAGCCCTGACCCCTTCTAGTGATCTGCTTGAAGAAA
CCTGGGTTAAAGGTGCACATAACCACGGCACGCTGAAACAGTCAAAAGTC
AATAATTAGTTTGAACACGGAGGTGGCCCCGTCCACCAATCAATCTTTGG
CCAACCCTGGTACGAGTGCAACTCAGCAACAAGCCGGCGGATGGTGAGGG
CAACACACTCACTTGGAAAATGTGTTTTGCTTTACGTGCCGCAGGGCTCA
GGGAGTGGTGGAAGAAGGAAGCCAAGTCCGATCTCATGGTATACGGCACA
TCCCTGGCCGTCGCACTCACCATTCGTACGGTGGCGTTAGAGCCGCGGTA
CATCCCCTCGTTGTCCATGTTCCCCACCTTTGAGGTGGGCGACCAGTTGG
CGGTGGATAAGCTCTCGGCGAAGCTCTCCAGGCCTTACCAACGGAAAGAC
GTCGTGGTGTTCTACCCCCCGCCCGCCTTCCTCGAATTTTCCACCAGGGG
CACGAACGAGGTCCGCATTAAGCAGAGTACTTGTTGCGATGACTTTGCCC
ATATCCGGCCCACGAAGCGTTCCGTATACATAGTAGGAATCTCGGTCGGG
TACGTTAGCCCGCCTGTTGACGCGTCGCGCCTGTTCCCTTGATGGTTGAT
GACCACGCTCGTAGTTACGGGAAATACATGAGTGTATGCAGTATTCATCC
ACCCCCCGCCAGCGTCCTTCGCCGCCCTAGCCGTGGGAACTTCGGTAGAG
ATGACTGCCTGTACGCTGTGAAACGCATAGTCGTATTTTTCTCCTTTTTC
ATAAACATCGTCGGCATAAAAAATAATGTTATAACACCATTCGTTGACGC
GCCCGTGTCGTTAGGCTCTAATCAAGCGTGTGATCGCGGTGGATGGAGAT
AATGTGCAGATCAAGGGCGGATCTCTGTTTGTAAATGGAAAAGAACAGTT
CGAGCAGTACACCTTCGAGGTGCGTGACCTAACAGTAGAACCGCTTACGG
TGAGGCCCGTGGTGACTCTCCGCACTCTCTCTTCATGATCGCTCGCTCGA
TTTGCGTCCGTGTGAAAGCAGGCTATCTATCGTCGAGTCCAGGGTATTGA
TCAGAGAAACGTTTCCACCGCCGTTCGACGTGCGGACTAACCTACGCCCT
CTGTCCAGACTTCTACAATGTTGCGTTCAGAATGCAATCCACCCGTCAAC
AGCGAGAACACTCGGAAGTACTGCATTTTTACTGTTCGTAGGGCGTTTCT
GTCGTGTTTCTTTAGGTGGTGTTCCCTTTTGACATCTTGACTTCCGCGAT
CTGTAACACTATCATTTTTTTTGTCTGTGACGCGTTCGAACCACACTGTC
GGCAGGAACCTGAGTACAGCTGGGGGCCACAGACAATTCCCGAGGGCATG
GTAATGGTTTTGGGTGACAATCGTAACCATAGCTTGGACTCGCATATCTG
GGGTTTCCTGCCACGAGAAAACGTCATTGGCAGGGCGATCTTCAAATACT
GGCCGCCTTGGCGAGCGGGGCTTGTGGAGAGCTAGCGCACCGCTCGCGAT
AATAAAATACTGTAAAAGAGTATGAATTCGAGGCTGCAACTACTTGTGAA
GTGCATACGCGGAGTTGCGTATAGACCCCACGAAAGCGCCCGCCCGCCCC
GATATTTGTGAGAAAACGCTGGCGGTCTCGAGATGACCTCCAATGGACCT
CTGGGTCCAACATTAGAATAACTACTCTTTAGGAGAGTTGGCTGCAGCGC
GCGTTGCTGTTAAAAGTGAACAACGTAGAATGCTTCAATATGCTGCGATC
ACTTCTAACATGAGAACCGCTCGCGGCGCTCACGCGCTCATACTCAGACG
AACCTGTTCGAGTTTTAGTTGTTAGTTCTCTCGCCAAACCTGACATGATG
GCGAAACAATGAGAGTTATTTGGGGTTACGTCGGAAAATGTTGTTCGTGC
AGTAGAAATTTCCGCTCTTCTACTCGTAGAGTGCGAATGTTGGTGGAAAC
GTCCCGTAGGTTCGAAACTGGGGGGTACGGGGCCATTTTCCTTTTCCCTC
CGGCTCTACCTGCCTGCTTCGAGTCGGAAACCTTTGCCGCAGCAGCATGC
GCGCAATTTGTACAGTATGATAGTCTGCATGAGTACAATGAAGTCATCCA
TGTCTGTTCCTCATTGGTTACTTGGAGACTCGCCCAACTCGGGCCTTTTG
TTTGAACGATTGCACCTTTGTCTGGGGCAGAAGCTGTGTCGGTACGGCTT
GCCGGCAGCCCTCATCCAACACAATCCACACGAAGCAAATCGCTCTGGCA
TTATAGCTACCAGGTGTAGTGTCGTTGGATATCACACAGGTATAATGTTG
TTGGATATCACATTTAGCAAATAGGGGTCAAACCGTAAATGATTGCTACT
CCTGTTTTGGGGGCTCTTCCGTCCCGCGTTAATTCCCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig130:607846..611733+

>mRNA_F-serratus_M_contig130.2258.1 ID=mRNA_F-serratus_M_contig130.2258.1|Name=mRNA_F-serratus_M_contig130.2258.1|organism=Fucus serratus male|type=CDS|length=1710bp|location=Sequence derived from alignment at F-serratus_M_contig130:607846..611733+ (Fucus serratus male)
ATGGCTGCTGGACGTTCATGCGCTCGTACCTTGGCATTTCTACTGGTACT
AGTTTCGTCGCTCTGTGGATGCCGAGCCTTTCATGTAGTCCCATTCAACC
GATATCCTTCCAGGCCGTCGCCAACTTCTATCCAGAGGAGATTGTCACCT
CGATGTGGGCACGGCTTTGGCCGGCCTCGACCGCTCGTTCCCTTACCACC
AAGGGTAGCTGGTGACCCGCCATCATCGGAAAATAGCGATGGTCAGGGAA
GTGAAGGAGGAGGAAGTGGAGGTGGACGGGATGAAGGGTCTGGTTTATTT
GGAGATGGCTGCTGGACGTTCATGCGCTCGTACCTTGGCATTTCTACTGG
TACTAGTTTCGTCGCTCTGTGGATGCCGAGCCTTTCATGTAGTCCCATTC
AACCGATATCCTTCCAGGCCGTCGCCAACTTCTATCCAGAGGAGATTGTC
ACCTCGATGTGGGCACGGCTTTGGCCGGCCTCGACCGCTCGTTCCCTTAC
CACCAAGGGTAGCTGGTGACCCGCCATCATCGGAAAATAGCGATGGTCAG
GGAAGTGAAGGAGGAGGAAGTGGAGGTGGACGGGATGAAGGGTCTGGTTT
ATTTGGAGGGCTCAGGGAGTGGTGGAAGAAGGAAGCCAAGTCCGATCTCA
TGGTATACGGCACATCCCTGGCCGTCGCACTCACCATTCGTACGGTGGCG
TTAGAGCCGCGGTACATCCCCTCGTTGTCCATGTTCCCCACCTTTGAGGT
GGGCGACCAGTTGGCGGTGGATAAGCTCTCGGCGAAGCTCTCCAGGCCTT
ACCAACGGAAAGACGTCGTGGTGTTCTACCCCCCGCCCGCCTTCCTCGAA
TTTTCCACCAGGGGCACGAACGAGGGCTCAGGGAGTGGTGGAAGAAGGAA
GCCAAGTCCGATCTCATGGTATACGGCACATCCCTGGCCGTCGCACTCAC
CATTCGTACGGTGGCGTTAGAGCCGCGGTACATCCCCTCGTTGTCCATGT
TCCCCACCTTTGAGGTGGGCGACCAGTTGGCGGTGGATAAGCTCTCGGCG
AAGCTCTCCAGGCCTTACCAACGGAAAGACGTCGTGGTGTTCTACCCCCC
GCCCGCCTTCCTCGAATTTTCCACCAGGGGCACGAACGAGGCTCTAATCA
AGCGTGTGATCGCGGTGGATGGAGATAATGTGCAGATCAAGGGCGGATCT
CTGTTTGTAAATGGAAAAGAACAGTTCGAGCAGTACACCTTCGAGGCTCT
AATCAAGCGTGTGATCGCGGTGGATGGAGATAATGTGCAGATCAAGGGCG
GATCTCTGTTTGTAAATGGAAAAGAACAGTTCGAGCAGTACACCTTCGAG
GAACCTGAGTACAGCTGGGGGCCACAGACAATTCCCGAGGGCATGGTAAT
GGTTTTGGGTGACAATCGTAACCATAGCTTGGACTCGCATATCTGGGGTT
TCCTGCCACGAGAAAACGTCATTGGCAGGGCGATCTTCAAATACTGGCCG
CCTTGGCGAGCGGGGCTTGTGGAGAGCTAGGAACCTGAGTACAGCTGGGG
GCCACAGACAATTCCCGAGGGCATGGTAATGGTTTTGGGTGACAATCGTA
ACCATAGCTTGGACTCGCATATCTGGGGTTTCCTGCCACGAGAAAACGTC
ATTGGCAGGGCGATCTTCAAATACTGGCCGCCTTGGCGAGCGGGGCTTGT
GGAGAGCTAG
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