mRNA_F-serratus_M_contig130.2257.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI) HSP 1 Score: 323 bits (827), Expect = 2.880e-105 Identity = 198/351 (56.41%), Postives = 217/351 (61.82%), Query Frame = 3
Query: 135 FRVGPFWH--VVGRRQ-LGCVDPPLVRGCSGGSGLSAATMSAQEGAPTIRTKSADMAEVALTREAGKNKKLASRLEEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVPV--ACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERR---------------------------PRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRT--------------GALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAVAVAKT 1049
F P WH ++GR + +G P RGC A GA EVALTREAGKN KLA L +AGIS VE+PCI HQDGPDLPLLP AL D LAYVV+TSPEAAKVFL+GW AG P VPV ACVGKAT + L G+ VFTPSKATGETLAAE+P+P + PRVLYPASA+AQ TLESGL ARGF V+RLNTYDTVPA WD SAEAAA ASV AFGSPSAVKTWA R GV GALAACIGETSARACREAGWAES IFYP KPGMEGWA+A+ A+A +T
Sbjct: 40 FGRSPEWHSGIIGRGETVGHARPSTARGC------------ASRGA-----------EVALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSAPADDTXXXXXXXXXXXXXXXXXXXXXXXXXXXGPRVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGVVAAGVXXXXXXXXXXXXXXXXGALAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQALAAVET 367
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA) HSP 1 Score: 242 bits (617), Expect = 6.050e-75 Identity = 146/277 (52.71%), Postives = 175/277 (63.18%), Query Frame = 3
Query: 210 CSGGSGLSAATMSAQEGAPTIRTKSADMAEVALTREAGKNKKLASRLEEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVPVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYA-GMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAVA 1037
C+ SG +A MSA T RT VALTREAG N KL + L GI+CVE+PCI DGPD LP L YV++TSPE+AKVFL W+ A +P V VACVG AT + L G++ FTPS+A GE LAAE+P+P A G PRVLYPAS RA T++ GL ARGFHV RLNTYDT A W + + A A+V AFGSPSAVK W GV A AACIG TSA+A + AGWA+ IF+P KPGM GWA+A+ +A+A
Sbjct: 16 CAAWSGGNAWVMSA---GGTSRT-------VALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIPLPPSAAVGEGGAPRVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMGVEA------AAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEALA 276
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP) HSP 1 Score: 228 bits (581), Expect = 6.350e-69 Identity = 131/245 (53.47%), Postives = 161/245 (65.71%), Query Frame = 3
Query: 300 VALTREAGKNKKLASRLEEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVPVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAV 1034
VALTRE GKN KL L E GI VE+PCI + G D LP AL++ + YVV+TSPEAA VFL W AG+P++PVACVG T + L++ GI+ VF PSKATG+TLA ELP G R RVLYPASA+A+ ++ GL ARGF V RLNTYDTV A W +A+V+A SPSAVKTWA R G + AACIGETSA AC+E G+ +F+P PG+ GWA+A+ DA+
Sbjct: 88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQE-EWEYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP------GPRRSGRVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGTKQ-------YAACIGETSAAACKELGFEH--VFWPESPGILGWAQAVHDAL 316
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC) HSP 1 Score: 224 bits (571), Expect = 2.850e-68 Identity = 131/245 (53.47%), Postives = 161/245 (65.71%), Query Frame = 3
Query: 300 VALTREAGKNKKLASRLEEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVPVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAV 1034
VALTRE GKN KL L E G+ VE+PCI + G D LP+AL++ D YVV+TSPEAA VFL W A QP++ VACVG T + L++ GI+ VF PSKATG+TLA ELP G + RVLYPASA+A+ ++ GL ARGF V RLNTYDTV A W A +A+VVA SPSAVKTWA R G + AACIGETSA AC+E G+ +F+P PG+ GWA+A+ DA+
Sbjct: 24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP------GPQGNGRVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGTKQ-------YAACIGETSASACKELGFEH--VFWPESPGIPGWAQAVHDAL 252
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO) HSP 1 Score: 220 bits (560), Expect = 3.420e-66 Identity = 124/251 (49.40%), Postives = 150/251 (59.76%), Query Frame = 3
Query: 303 ALTREAGKNKKLASRLEEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVP-VACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAVAVAKTS 1052
A TRE GKN++L + + VE+PCI H DGPD L L++ YV ITSPEAA+V S W+ P P V VGKAT + L+ +GI F PSKAT E L ELP+P + +++P+VLYPAS RAQ TL+ GL RGF V RLNTYDTV A W+ A + F SPSAVK W + LAACIGETSA+ACRE GW E IFYP KPGMEGW A+ +A A T+
Sbjct: 50 AATREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPLPSQ---QQQQPKVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGWLLNT-----ENNNAVLAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEAAASLATT 292
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A7S4JXA4_9STRA (Uroporphyrinogen-III synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXA4_9STRA) HSP 1 Score: 220 bits (561), Expect = 5.420e-66 Identity = 127/253 (50.20%), Postives = 152/253 (60.08%), Query Frame = 3
Query: 300 VALTREAGKNKKLASRL-------EEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAV-PVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAV 1034
VALTRE GKN KL L + + EIPCI H DG D L L++R YV +TSPEAA+V S WEGAG+P++ +A VGKAT E L GI+ F PSKAT +TL ELP D+ R +LYPASA+A+ TL++GL RGF V RL+TYDTVPA W A A V F SPSAV W G E AACIGETSA+ CR+ GW E I+YP KPG+EGWA A+ DA+
Sbjct: 62 VALTREDGKNSKLLRALLSHPRIGDAIPVDIEEIPCIEHADGDDYDRLGPTLKERSFDYVAVTSPEAARVLASAWEGAGRPSMGKIAAVGKATGEALIALGIEVDFVPSKATAKTLVEELPPSDDATAEGRPTTLLYPASAKARPTLQNGLEGRGFDVTRLDTYDTVPASWSEDRTDLAREAGVACFASPSAVNAWVENLGGEGEGCSGDVAAACIGETSAQGCRDMGWDEGDIYYPEKPGVEGWANAVADAL 314
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO) HSP 1 Score: 216 bits (551), Expect = 7.650e-65 Identity = 126/253 (49.80%), Postives = 149/253 (58.89%), Query Frame = 3
Query: 303 ALTREAGKNKKLASRLEEAGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVP---VACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAVAVAKTS 1052
A TRE GKN++L + ++ VE+PCI H DGPD L LE YV ITSPEAA+V S W+ P V VGKAT + L+ SGI F PSKAT E L ELP+P ++PRVLYPAS RAQ TL+ GL RGF V RLNTYDTV A+W+ A + F SPSAVK W + + LAACIGETSA+ACRE GW E IFYP KPGMEGW A+ +A A T+
Sbjct: 50 AATREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPLPSS-----QQPRVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGWLLNTENNHQV-----LAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEAAASLATT 292
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS) HSP 1 Score: 213 bits (543), Expect = 3.270e-63 Identity = 129/258 (50.00%), Postives = 155/258 (60.08%), Query Frame = 3
Query: 300 VALTREAGKNKKLASRL----------EEAGISCV--EIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAV-PVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAV 1034
VALTRE GKN KL L + +G++ EIPCI H DGPD L L YV ITSPEAAKV ++ W AG+P + VA VGKAT E+L++ GI+ F PSKAT TL ELP+ D R + YPAS +A TL++GL RGF V RLNTYDTVPA WD A +A+V F SPSAVK W + R A AACIGETSA ACR+ W ES IFYP KPG++GWA ++ DA+
Sbjct: 67 VALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLSDAATKEGRSSTLFYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAWLKNTDGMNKPAR--AKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA) HSP 1 Score: 213 bits (542), Expect = 4.120e-63 Identity = 129/259 (49.81%), Postives = 155/259 (59.85%), Query Frame = 3
Query: 300 VALTREAGKNKKLASRLEE-------------AGISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAV-PVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAV 1034
+ALTRE GKN KL L+ + + EIPCI H DGPD +L L D YV ITSPEAAKVF + W G+P V VA VGKAT E L+ GI F PSKAT TL ELP +E R +LYPASA+AQ TL++GL RGF V RLNTYDTV A W E+ A + +V F SPSAVK W V+ + R ALAACIGETS AC++ GW E IFYP KPG++GWA ++ +A+
Sbjct: 63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTLEEATNEGRSTSLLYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAW-VKNTAQLDCPR--ALAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANAL 318
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Match: A0A7S4ATH7_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATH7_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.070e-60 Identity = 124/257 (48.25%), Postives = 150/257 (58.37%), Query Frame = 3
Query: 300 VALTREAGKNKKLASRLEEAG-----ISCVEIPCIRHQDGPDLPLLPTALEDRDLAYVVITSPEAAKVFLSGWEGAGQPAVPVACVGKATSETLEKSGIKSVFTPSKATGETLAAELPIPDEYAGMERRPRVLYPASARAQMTLESGLVARGFHVQRLNTYDTVPAEWDASAEAAAMAASVVAFGSPSAVKTWAVRAGVARETTRTGALAACIGETSARACREAGWAESTIFYPAKPGMEGWARAILDAVAVAKTSS 1055
+ LTRE GKN+KL ++EE I +E+PCI H GPD L + L +V ITSPEAA + S W+ +PV VGKAT L+ S I F PSKAT +TLA EL E ++ VLYPASA+A+ TLE+ L+ARGF V+RLNTYDTV A W + ++ V F SPSAVK W G TG LAACIGETSA AC E GW E+ IF+P PG+EGW AI A AK SS
Sbjct: 66 ITLTREDGKNEKLIKKMEENSQLMEEIDVLEMPCIEHAVGPDYEQLSSTLLSERWDFVAITSPEAANILASAWDAVRDNPLPVVAVGKATENRLKDSEISVAFVPSKATAKTLAKEL----ESVHETKKTSVLYPASAKAKKTLENDLMARGFAVKRLNTYDTVTATWTDEQKESSNRVLVACFASPSAVKGWLKNTGG-----NTGVLAACIGETSASACEELGWEENQIFFPESPGLEGWVEAIQKATEFAKKSS 313 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2257.1 >prot_F-serratus_M_contig130.2257.1 ID=prot_F-serratus_M_contig130.2257.1|Name=mRNA_F-serratus_M_contig130.2257.1|organism=Fucus serratus male|type=polypeptide|length=349bp MNNPKLMRHIPSVRLLRTARVIALTVATFDLFLLSAGFRVGPFWHVVGRRback to top mRNA from alignment at F-serratus_M_contig130:606060..607713- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig130.2257.1 ID=mRNA_F-serratus_M_contig130.2257.1|Name=mRNA_F-serratus_M_contig130.2257.1|organism=Fucus serratus male|type=mRNA|length=1654bp|location=Sequence derived from alignment at F-serratus_M_contig130:606060..607713- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig130:606060..607713- >mRNA_F-serratus_M_contig130.2257.1 ID=mRNA_F-serratus_M_contig130.2257.1|Name=mRNA_F-serratus_M_contig130.2257.1|organism=Fucus serratus male|type=CDS|length=2094bp|location=Sequence derived from alignment at F-serratus_M_contig130:606060..607713- (Fucus serratus male)back to top |