mRNA_F-serratus_M_contig130.2242.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig130.2242.1
Unique NamemRNA_F-serratus_M_contig130.2242.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A2G2W247_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W247_CAPBA)

HSP 1 Score: 125 bits (314), Expect = 8.030e-27
Identity = 108/386 (27.98%), Postives = 167/386 (43.26%), Query Frame = 1
Query:  304 KFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGA-----------AAMVGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEAITR---NTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGEFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            KF+GKCFNCGK GH++ +C+  KK  +K  A   +                MVG  R+     W  DSGAT H+  +    S Y  A  E +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S V  +++ G   +    + V+     E  V K     GL+              +E N   N S  + S         +++   H  L H +    R   N   +   E       C+TC + K  +H  P K+ +R S        D+       S GG  Y + F+DDCTR+  V  +  K +A  A      +        I+ +R+D GG++E  F +      I H  T P +PQ NG+AE
Sbjct:  739 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS-VSLLDKNGFKCVTVSGKIVVSKG--EMYVGKGYLEEGLYKMNVMN--------VEMNKNSNSSYLLES---------YNLW--HERLGHVNYKTLRKLINLEVLPNFECNKS--KCQTCVESKYAKH--PYKSVERNSNPLDLIHTDICDMKSTPSRGGKKYFITFIDDCTRYCYVYLLNSKDEAIDAFRQYKTEVENQLDKRIKMIRSDRGGEYESPFAQICVENGIIHQTTAPYSPQSNGIAE 1089          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA)

HSP 1 Score: 124 bits (310), Expect = 2.330e-26
Identity = 107/386 (27.72%), Postives = 168/386 (43.52%), Query Frame = 1
Query:  304 KFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGA-----------AAMVGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEAITR---NTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGEFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            KF+GKCFNCGK GH++ +C+  KK  +K  A   +                MVG  R+     W  DSGAT H+  +    S Y  A  E +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S V  +++ G   +    + V+     E  V K     GL+              +E N   N S  + S         +++   H  L H +    R   N   +   E       C+TC + K  ++  P K+ +R S        D+       S GG  Y + F+DDCTR+  V  +  K +A  A      +     +  I+ +R+D GG++E  F +      I H  T P +PQ NG+AE
Sbjct:   28 KFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDNLCAMFTECNMVGNPRA-----WWMDSGATLHVCASKELFSTYAPAQAEETIYMANSTTAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS-VSLLDKNGFKCVTVSGKIVVSKG--EMYVGKGYLEEGLYKMNVMT--------VEMNKHSNSSYLLES---------YNLW--HERLGHVNYKTLRKLINLEILPNFECNKS--KCQTCVESKYAKN--PYKSVERNSNPLDLIHTDICDMKSTPSRGGKKYFITFIDDCTRYCYVYLLNSKDEAIDAFRQYKTEVENQLEKRIKMIRSDRGGEYESPFAQICVENGIIHQTTAPYSPQSNGIAE 378          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A2G2VDA6_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VDA6_CAPBA)

HSP 1 Score: 122 bits (307), Expect = 5.660e-26
Identity = 106/386 (27.46%), Postives = 166/386 (43.01%), Query Frame = 1
Query:  304 KFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGA-----------AAMVGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEAITR---NTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGEFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            KF+GKCFNCGK GH++ +C+  KK  +K  A   +                MVG  R+     W  DSGAT H+  +    S Y  A  E +I +A+  T  V+G G++ + +     + K++ +++V YVP L RNL+S V  +++ G   +    + V+     +  V K     GL+              +E N   N S  + S         +++   H  L H +    R   N   +   E       C+TC + K  +H  P K+ +R S        D+       S GG  Y + F+DDCTR+  V  +  K +A  A      +        I+ +R+D GG++E  F +      I H  T P +PQ NG+ E
Sbjct:  263 KFKGKCFNCGKIGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATHHVCESKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS-VSLLDKNGFKCVTVSGKIVVSKG--KMYVGKDYLEEGLYKMN--------VMIVEVNKHSNSSYLLES---------YNLW--HERLGHVNYKTLRKLINLEILPNFECNKS--KCQTCVESKYAKH--PYKSVERNSNPLDLIHTDICDMKSTPSRGGKKYFITFIDDCTRYCYVYLLNSKDEAIDAFRQYKTEVENQLDKRIKMIRSDRGGEYESPFAQICVENGIIHQTTAPYSPQSNGIEE 613          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A0J7KDP1_LASNI (Retrovirus-related gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KDP1_LASNI)

HSP 1 Score: 115 bits (288), Expect = 1.440e-23
Identity = 109/385 (28.31%), Postives = 169/385 (43.90%), Query Frame = 1
Query:  307 FEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGA----AAMVGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEV----HRMLAHPS-----EAITRNTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKF-EGEFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            F+ KC  C   GH+A +CK  KK N++  A +         A +VG T + +   W  DSGAT H  H      +      E  + +A+  +  + G G   ++ D  G   +++R+    +VP L  NL+S V  + Q G  + + R RAV+ L  E ++        GL+   G+              T   +V       +  A   DV +     HR   H +     EA+ R     +   +    G CE C + K  R   P K+++  +V       D+ GPM+  S+GG  Y++ F+DDC+R+  + F+K KSD   AL   V          I+C+++DNG +F   +    L  R I    T P +PQ NGVAE
Sbjct:  230 FKYKCHKCKAVGHKAADCK-DKKTNQQTAASSTDTSMLVSEAFLVGATGTGK---WCLDSGATSHFCHEAQNFKDDMNVKSE-ELNLANCESTLIKGEGTTLLNTDVCGEK-RLIRLKSTQFVPDLRMNLLS-VSRITQHGFEVTFDRERAVV-LDSEGNVKLIARKTNGLYIVEGS--------------TDEAAV-------VEEACIDDVTQTEEDWHRRFGHLNFRDLQEAVRRGRVEGVKSGSLANNG-CEACLEAKITRSPFPIKSDRTTAVL-DLVHTDLCGPMRIPSIGGAKYILHFIDDCSRWGQIYFLKSKSDVFQALKEYVVMIENQTGKKIKCIQSDNGKEFVNSDIDGFLKERGIVRRLTVPYSPQQNGVAE 583          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A8J6L9W6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9W6_TENMO)

HSP 1 Score: 114 bits (286), Expect = 2.460e-23
Identity = 116/406 (28.57%), Postives = 182/406 (44.83%), Query Frame = 1
Query:  247 ENNPDGLNRENGRNRRLFNKFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGAAAM--VGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRA-VLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAH-----PSEAITRNTAAMMGIETTGQWGV------CETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGE-FQRELDRRSITHGHTPPDTPQYNGVAE 1419
            E   +G N ++G  +  +  F+ +C+ C + GH+A +CK    K+ +  A + ++   ++     T S+++  W  DSGAT H+ +     S  K  S    I +A+  +  +   G+     D  G + K + +     VP L  NL+S  K  E+ G  +I+ R+ A V+G  G   LV     R G       R   R            GSV  A    L    + +V   HR L H      SEAI++ T  ++G++             CE C Q K  R   PK+++ R S   +    DV GPM+  S+    Y + F+DDC+R+ VV+F++ KS+A  A    +      Q   I+  + DNGG++  E F   L    IT   T P  P+ NG+AE
Sbjct:   81 EKTTNGENSKSG-TKNDYGNFKYRCYKCKEIGHKAADCKN---KDFRASAKSAEDTCLSVSECHLTSSNKRNTWCLDSGATSHLCNDERAFSEMK--SEPGKINLANNGSTNITAQGKAMFTADVFGES-KNISLSKTLLVPDLRTNLLSVGKITEK-GCEVIFKRDNAFVVGNDGSVKLV---ADRIGELYYARERNKERS----------TGSVFAAG---LPCTKTFEVW--HRRLGHLNTRDMSEAISKGT--VLGLDVLKPMNFARDSIECEVCLQGKMVRTPFPKRSD-RTSELLELIHSDVCGPMRVESMSKARYFIEFIDDCSRWTVVRFLRSKSEAIEATKGFITMVENQQGKKIKTFQTDNGGEYTSEQFDNLLKGLGITRRFTIPHNPEQNGIAE 457          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A6P5MS85_ARADU (DNA-directed RNA polymerase subunit n=1 Tax=Arachis duranensis TaxID=130453 RepID=A0A6P5MS85_ARADU)

HSP 1 Score: 114 bits (286), Expect = 3.070e-23
Identity = 113/394 (28.68%), Postives = 165/394 (41.88%), Query Frame = 1
Query:  319 CFNCGKKGHRAVEC----------------------KGTKKKNEKPGAPAEKEGAAAMVGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEAITRNTAAMMGIETTGQWGV----CETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGE-FQRELDRRSITHGHTPPDTPQYNGVAE 1419
            C +CGKKGH    C                      + + ++ E   A  E E   A  G      ++ W  DSG + HMS   A  +N  + S  T + + +G+ L V+G G +   L+ PG    M    DV YVP + +NL+S  + VE+ G  +++ +N   +    E  L+F+   +   F+   A +    E+   A + G   +                   HR L H      +       +E   Q G     CE C Q K  R    +KT  RA  K Q    DV GPM   SL  + Y V F+DDCTRF  V F+K+KS+     L    +        I+ VR+DNGG++  + F+   +   I    T P TPQ NGV+E
Sbjct:  693 CKHCGKKGHPFFRCWRRPNVVXXXXXXXXXIERICKEKSSQQGEAQAAAGEVEQLFAASGFVSQVSRDGWLVDSGCSNHMSGNEAIFTNIDR-SVNTRVRIGNGDHLEVEGRGNVL--LEGPGGVKLM---SDVYYVPKIDQNLLSVGQLVEK-GMKIVFDKNECAIA-DEEGKLLFRIPMQNKTFAFDPASK----ESKAMACVQGQEELW------------------HRRLGHFHYKGLQFMQRHGLVEDLPQLGSEVSDCEVCLQGKLVRKPF-QKTRWRAKKKLQLVHSDVCGPMPEESLNKSKYFVTFIDDCTRFCWVYFLKQKSEVDEVFLRFKQEVENEANCKIKTVRSDNGGEYTSKRFKAICEDSGIKQQFTVPYTPQQNGVSE 1055          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A2N9IUL9_FAGSY (Uncharacterized protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUL9_FAGSY)

HSP 1 Score: 111 bits (278), Expect = 2.640e-22
Identity = 112/390 (28.72%), Postives = 173/390 (44.36%), Query Frame = 1
Query:  289 RRLFNKFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAE---KEGAAAMVGTTRSDEKEE---WESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSE------AITRNTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKF-EGEFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            RR +NK   KC+NC + GH A EC+      E+     E   +E    ++   + + KEE   W  D+GA+ HM    A      + S   ++   D + +PV G G+I + L           + DV YVP +  N++S  + +E+     I+ ++R+ L    + +L+ K               + R   FL   L  +  V    +A  R ++       H  L H +       A T+    +  IE   Q  +CE C   K  R + PK+   RA+   Q    DV GP+K SSLG NNY ++F+DD +R   + F+K+KS+   A     A         I+ +R+D GG+F   EF+   +   I    T P +PQ NGVAE
Sbjct:  280 RRRYNKNNVKCYNCQRFGHYASECRSATNNVEEKANYVEDLNEEVEPTVLLAYKGENKEEENVWYLDTGASNHMCGNKAMFLELNE-SVVGNVTFGDLSKVPVKGKGKILIRLKNGDHQF----IYDVYYVPSMKNNILSLGQLLEKDYD--IHLKDRSCLIRDHQNNLIAKV-------------PMTRNRMFL---LNIHNDVAKCLKACYRDSS----WLWHLRLGHLNFGGLKLLAKTKMVRGLPSIEHPNQ--LCEGCLFGKQSRKSFPKEASTRANKPLQLVHADVCGPIKPSSLGKNNYFLLFIDDFSRKTWIYFLKQKSEVFGAFKKFKAFVEKQSDQEIKALRSDRGGEFTSNEFKEFCETNGIRRPLTVPRSPQQNGVAE 640          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A2G3BPT2_CAPCH (Uncharacterized protein n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3BPT2_CAPCH)

HSP 1 Score: 110 bits (275), Expect = 5.420e-22
Identity = 107/386 (27.72%), Postives = 168/386 (43.52%), Query Frame = 1
Query:  304 KFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPA-----EKEGAAAM------VGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEAITR---NTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGEFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            KF+GKCFNCGK GH++++C+  KK  +K  A       E +   AM      VG  R     EW  DSG T H+       S++  A  E  I +A+  T  V+G G++ + +     + K++ +++V Y+P L RNL+S V  +++ G   +    + V+     E  V K     GL+              +E N + N S  + S         +D+   H  L H +    R   N   +   E       C+TC + K  +H  P K+ +R S      +  +       S GG  Y++ F+DDCTR+  V  +  K +A  A      +        I+ + +D GG++E  F        I H  T P +PQ NG+AE
Sbjct:  401 KFKGKCFNCGKIGHKSMDCRAPKKGKKKYQANMFESNKEYDDLCAMFSEYNLVGDPR-----EWWMDSGVTRHVCANKELFSSFAPAQVEEMIYMANSVTAKVEGTGKVCLKMT----SGKVLTLNNVLYIPELRRNLIS-VSLLDKNGFKYVTVSEKIVISKG--EMYVGKDYLTEGLYKMNVMT--------VEINKSLNSSYFLES---------YDLW--HERLGHVNYETLRKLINLEVLPNFECNKS--KCQTCVESKYAKH--PYKSVKRNSNPLDLVYNVICDMKSTPSRGGKKYLITFIDDCTRYCYVYLLNSKDEAIDAFRQYKTEVENQLDKKIKMI-SDRGGEYESLFAEICVENGIVHQTTAPYSPQSNGIAE 750          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: UPI00067B46BF (retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067B46BF)

HSP 1 Score: 110 bits (274), Expect = 8.630e-22
Identity = 99/385 (25.71%), Postives = 177/385 (45.97%), Query Frame = 1
Query:  319 CFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGAAA-----------MVGTTRSDE---KEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAV-LGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEAN-LTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEA-ITRNTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGEFQRE-LDRRSITHGHTPPDTPQYNGVAE 1419
            C  C  KGHR  +CK   K + +P  P     A++           MV    +++   +E W  D+GAT H++   +  +++ +   + ++  ADG T+P  G G +EV+ +  G+  +++ +++V  VP L++NL S + A ++    +     R   L + G   +V       GL+       +  + + +E N +TG+  +++                 H  LAH  +  + R     +GI+ +     CE C   K   H  P  T +RA   G+    DV GP    S+    Y V+F DD + +++V F++ KS+    LL ++ + +     +++ + +DNGG+F  E  R+ L R  I    T P TP+ NG +E
Sbjct:  239 CNYCSGKGHRVRKCKKWIK-DGRPPKPTSGTSASSSKFKQVQQISLMVNACSNNQMQDRENWYVDNGATVHIAVKKSFFNDFHEFDSDHTVNTADGTTIPALGTGSVEVESNVNGQK-EIITLNNVWLVPSLTKNLFSPLAAQDKVQNSVFTSTTRECKLDIAGTTKVVGSRSHCGGLYKLEIKTIVPTKHSAIEINAVTGSNLLQL----------------YHERLAHQDKRHVIRVVKRELGIQLSPDKMTCEGCIYGKS--HRKPFGTRERAKAVGELIHTDVCGPFA-KSISKYQYYVLFKDDYSSYRMVYFIRHKSEVKDKLLLMLQE-VKNAGHTVKTLLSDNGGEFNNENVRKILQRYGIQQRLTMPYTPEQNGCSE 601          
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Match: A0A0J7K988_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K988_LASNI)

HSP 1 Score: 108 bits (270), Expect = 2.590e-21
Identity = 107/376 (28.46%), Postives = 160/376 (42.55%), Query Frame = 1
Query:  316 KCFNCGKKGHRAVECKGTKK-----KNEKPGAPAEKEGA--AAMVGTTRSDEKEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAVLGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASRAALRAAASHDVMEVHRMLAHPSEAITRNTAAMMGIETTGQWGVCETCFQIKPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEG-EFQRELDRRSITHGHTPPDTPQYNGVAE 1419
            KCFNCGK+GH A EC+  KK     K+E+  + ++KE +     V         +W +DSGA+ HM+      +++ +   +T++ +AD +TL V G G I V     G+    V++ DV YVP L R+L S V A ++ G                                   AR    Q  F       NG   I         A+     ++R    P ++I  N    + I+       CE C   K  R +   KT       G++   DV GPM   S+G   Y V+F DD T ++ V+F++ KSD  +  +   A      +  I+ +R+DNG ++   EF   L    I H  T P TP+ NG  E
Sbjct:  233 KCFNCGKRGHFARECRMPKKDDKSNKDERSTSKSKKEDSEETCNVEVNTISSGVDWIADSGASVHMTSQREIFTSFVEE--KTALSLADSSTLMVRGRGNIRVTSYVKGKVVD-VKLQDVYYVPELRRSLFS-VGAAQKHG---------------------------------VNARTEGNQMQFWR-----NGRCIIV--------ATRTNNNLYRCAFEPKKSIEVNAVKAVKID-------CEACAYGKAHRRSF--KTVDSKYKPGEKIHSDVCGPMPKMSVGQKRYFVLFKDDATGYRRVRFLRHKSDVLSEFMKFKAWVENKWERHIKVLRSDNGLEYVNKEFSDYLIMCGIEHEKTAPYTPEQNGRCE 549          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G2W247_CAPBA8.030e-2727.98Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2X5Y1_CAPBA2.330e-2627.72Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2VDA6_CAPBA5.660e-2627.46Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A0J7KDP1_LASNI1.440e-2328.31Retrovirus-related gag-pol polyprotein n=1 Tax=Las... [more]
A0A8J6L9W6_TENMO2.460e-2328.57Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A6P5MS85_ARADU3.070e-2328.68DNA-directed RNA polymerase subunit n=1 Tax=Arachi... [more]
A0A2N9IUL9_FAGSY2.640e-2228.72Uncharacterized protein n=6 Tax=Fagus sylvatica Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:300218..301912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score139.0
Seed ortholog evalue5.5e-30
Seed eggNOG ortholog164328.Phyra85763
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1419
Cds size1419
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2242.1prot_F-serratus_M_contig130.2242.1Fucus serratus malepolypeptideF-serratus_M_contig130 300218..301912 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929254.4249814-CDS-F-serratus_M_contig130:300217..3012211622929254.4249814-CDS-F-serratus_M_contig130:300217..301221Fucus serratus maleCDSF-serratus_M_contig130 300218..301221 -
1690962770.5542283-CDS-F-serratus_M_contig130:300217..3012211690962770.5542283-CDS-F-serratus_M_contig130:300217..301221Fucus serratus maleCDSF-serratus_M_contig130 300218..301221 -
1622929254.4374828-CDS-F-serratus_M_contig130:301392..3015331622929254.4374828-CDS-F-serratus_M_contig130:301392..301533Fucus serratus maleCDSF-serratus_M_contig130 301393..301533 -
1690962770.5659509-CDS-F-serratus_M_contig130:301392..3015331690962770.5659509-CDS-F-serratus_M_contig130:301392..301533Fucus serratus maleCDSF-serratus_M_contig130 301393..301533 -
1622929254.4551415-CDS-F-serratus_M_contig130:301638..3019121622929254.4551415-CDS-F-serratus_M_contig130:301638..301912Fucus serratus maleCDSF-serratus_M_contig130 301639..301912 -
1690962770.5755706-CDS-F-serratus_M_contig130:301638..3019121690962770.5755706-CDS-F-serratus_M_contig130:301638..301912Fucus serratus maleCDSF-serratus_M_contig130 301639..301912 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig130.2242.1

>prot_F-serratus_M_contig130.2242.1 ID=prot_F-serratus_M_contig130.2242.1|Name=mRNA_F-serratus_M_contig130.2242.1|organism=Fucus serratus male|type=polypeptide|length=473bp
EAWSNLELHYRAKGTREILRLSHEINGITMEPGSDPFKFMMKVDKLAGDL
HRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRENGRNRRLF
NKFEGKCFNCGKKGHRAVECKGTKKKNEKPGAPAEKEGAAAMVGTTRSDE
KEEWESDSGATFHMSHTHAGMSNYKKASPETSIEVADGNTLPVDGFGRIE
VDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLIYYRNRAV
LGLPGEESLVFKFCSRRGLFSATGARRIVRQETFLEANLTGNGSVKIASR
AALRAAASHDVMEVHRMLAHPSEAITRNTAAMMGIETTGQWGVCETCFQI
KPERHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTR
FKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRADNGGKFEGEFQRE
LDRRSITHGHTPPDTPQYNGVAE
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mRNA from alignment at F-serratus_M_contig130:300218..301912-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig130.2242.1 ID=mRNA_F-serratus_M_contig130.2242.1|Name=mRNA_F-serratus_M_contig130.2242.1|organism=Fucus serratus male|type=mRNA|length=1695bp|location=Sequence derived from alignment at F-serratus_M_contig130:300218..301912- (Fucus serratus male)
GAGGCATGGAGTAACCTTGAACTTCATTACAGAGCAAAAGGTACCAGAGA AATTCTTCGCTTGTCGCACGAAATAAACGGAATAACAATGGAGCCAGGTA GTGATCCATTCAAATTCATGATGAAAGTTGACAAGCTGGCAGGAGACCTG CACCGTCTAGGCGACAAATCAGTGACTGAACTAAGGAGATGCGTGATTAT TGTGTCCGGGTTGTCTGCTGATTATGAGATGGAATGCCGCATGCTAGAGA ACAACCCAGATGGTCTTAACAGGGGTGAGATTGAACGTGTTGTAGGAAAC CAGTACAACAGACTTCTCAGACAGCAACAGGACTCGAAGGCATTGTCAGC GTCGAGGGGCACCATCACGGCAAACCGAGAAAACGGGAGGAATAGGAGAC TCTTCAACAAGTTCGAAGGAAAATGCTTCAACTGTGGGAAGAAAGGGCAC CGTGCTGTGGAATGTAAGGGCACGAAGAAGAAGAACGAAAAACCCGGAGC CCCCGCCGAGAAGGAGGGCGGTGGCGGCGGTAGGTGCTACGTCTGTGGAA GTGTGGAGCACCTTGCGCACAAGCATTGTAGGCTGTGCAGGAGCCTAGAG CACCGGACGCGAGACTATGAGGAGCGCGAAGCTGAAAAAGGCGCAATGCT GGCAAAACTGACTATGCCGGCAGTTCCTGAGGTGAGGGCAGCGGCGGCAA TGGTGGGAACCACCCGTAGTGATGAAAAGGAAGAATGGGAATCAGATTCC GGCGCCACGTTTCACATGTCGCACACCCACGCCGGCATGTCTAACTATAA GAAGGCTTCACCAGAGACAAGCATTGAGGTTGCCGACGGAAATACTCTAC CGGTGGACGGCTTCGGGAGAATTGAAGTGGATTTGGACCAACCAGGACGT ACTACCAAGATGGTAAGGATGGATGATGTCGCGTACGTGCCTGGACTCTC TCGAAACCTGGTGTCTACCGTTAAGGCTGTGGAGCAATGGGGAAAACCGC TAATTTATTACAGGAATAGAGCCGTCTTGGGGCTCCCGGGGGAGGAGTCG CTTGTCTTCAAGTTCTGCTCCCGTAGGGGACTGTTTTCAGCAACAGGCGC GAGACGGATCGTGAGGCAGGAGACGTTTTTGGAGGCAAACCTGACAGGAA ATGGATCGGTGAAGATCGCTTCGAGAGCGGCGCTGAGAGCGGCCGCATCC CATGACGTCATGGAAGTTCACCGCATGCTTGCGCACCCGAGCGAGGCCAT CACAAGAAACACGGCTGCGATGATGGGGATCGAGACGACGGGCCAGTGGG GGGTGTGTGAGACATGTTTCCAGATCAAACCAGAACGACACGCCGTGCCC AAGAAGACGGAACAACGGGCGAGCGTGAAAGGACAGCGATTCTTCGTCGA CGTAGGCGGGCCGATGAAACACTCGAGTCTAGGCGGGAACAATTACGTCG TCATTTTTGTGGACGACTGCACCCGCTTTAAAGTGGTGAAGTTCGTGAAG AAGAAAAGTGACGCAACAGCTGCCCTCTTGTCTCTGGTTGCAGACTATAT CACACCGCAGAAGCTGTCGATCGAGTGCGTACGGGCAGACAATGGTGGCA AGTTTGAGGGAGAATTCCAGCGCGAACTGGACCGGCGCAGCATCACGCAC GGGCATACCCCGCCAGACACGCCGCAGTACAATGGGGTGGCCGAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig130:300218..301912-

>mRNA_F-serratus_M_contig130.2242.1 ID=mRNA_F-serratus_M_contig130.2242.1|Name=mRNA_F-serratus_M_contig130.2242.1|organism=Fucus serratus male|type=CDS|length=2838bp|location=Sequence derived from alignment at F-serratus_M_contig130:300218..301912- (Fucus serratus male)
GAGGCATGGAGTAACCTTGAACTTCATTACAGAGCAAAAGGTACCAGAGA
AATTCTTCGCTTGTCGCACGAAATAAACGGAATAACAATGGAGCCAGGTA
GTGATCCATTCAAATTCATGATGAAAGTTGACAAGCTGGCAGGAGACCTG
CACCGTCTAGGCGACAAATCAGTGACTGAACTAAGGAGATGCGTGATTAT
TGTGTCCGGGTTGTCTGCTGATTATGAGATGGAATGCCGCATGCTAGAGA
ACAACCCAGATGGTCTTAACAGGGGAGGCATGGAGTAACCTTGAACTTCA
TTACAGAGCAAAAGGTACCAGAGAAATTCTTCGCTTGTCGCACGAAATAA
ACGGAATAACAATGGAGCCAGGTAGTGATCCATTCAAATTCATGATGAAA
GTTGACAAGCTGGCAGGAGACCTGCACCGTCTAGGCGACAAATCAGTGAC
TGAACTAAGGAGATGCGTGATTATTGTGTCCGGGTTGTCTGCTGATTATG
AGATGGAATGCCGCATGCTAGAGAACAACCCAGATGGTCTTAACAGGGAA
AACGGGAGGAATAGGAGACTCTTCAACAAGTTCGAAGGAAAATGCTTCAA
CTGTGGGAAGAAAGGGCACCGTGCTGTGGAATGTAAGGGCACGAAGAAGA
AGAACGAAAAACCCGGAGCCCCCGCCGAGAAGGAGGGCGAAAACGGGAGG
AATAGGAGACTCTTCAACAAGTTCGAAGGAAAATGCTTCAACTGTGGGAA
GAAAGGGCACCGTGCTGTGGAATGTAAGGGCACGAAGAAGAAGAACGAAA
AACCCGGAGCCCCCGCCGAGAAGGAGGGCGCGGCGGCAATGGTGGGAACC
ACCCGTAGTGATGAAAAGGAAGAATGGGAATCAGATTCCGGCGCCACGTT
TCACATGTCGCACACCCACGCCGGCATGTCTAACTATAAGAAGGCTTCAC
CAGAGACAAGCATTGAGGTTGCCGACGGAAATACTCTACCGGTGGACGGC
TTCGGGAGAATTGAAGTGGATTTGGACCAACCAGGACGTACTACCAAGAT
GGTAAGGATGGATGATGTCGCGTACGTGCCTGGACTCTCTCGAAACCTGG
TGTCTACCGTTAAGGCTGTGGAGCAATGGGGAAAACCGCTAATTTATTAC
AGGAATAGAGCCGTCTTGGGGCTCCCGGGGGAGGAGTCGCTTGTCTTCAA
GTTCTGCTCCCGTAGGGGACTGTTTTCAGCAACAGGCGCGAGACGGATCG
TGAGGCAGGAGACGTTTTTGGAGGCAAACCTGACAGGAAATGGATCGGTG
AAGATCGCTTCGAGAGCGGCGCTGAGAGCGGCCGCATCCCATGACGTCAT
GGAAGTTCACCGCATGCTTGCGCACCCGAGCGAGGCCATCACAAGAAACA
CGGCTGCGATGATGGGGATCGAGACGACGGGCCAGTGGGGGGTGTGTGAG
ACATGTTTCCAGATCAAACCAGAACGACACGCCGTGCCCAAGAAGACGGA
ACAACGGGCGAGCGTGAAAGGACAGCGATTCTTCGTCGACGTAGGCGGGC
CGATGAAACACTCGAGTCTAGGCGGGAACAATTACGTCGTCATTTTTGTG
GACGACTGCACCCGCTTTAAAGTGGTGAAGTTCGTGAAGAAGAAAAGTGA
CGCAACAGCTGCCCTCTTGTCTCTGGTTGCAGACTATATCACACCGCAGA
AGCTGTCGATCGAGTGCGTACGGGCAGACAATGGTGGCAAGTTTGAGGGA
GAATTCCAGCGCGAACTGGACCGGCGCAGCATCACGCACGGGCATACCCC
GCCAGACACGCCGCAGTACAATGGGGTGGCCGAACGGCGGCAATGGTGGG
AACCACCCGTAGTGATGAAAAGGAAGAATGGGAATCAGATTCCGGCGCCA
CGTTTCACATGTCGCACACCCACGCCGGCATGTCTAACTATAAGAAGGCT
TCACCAGAGACAAGCATTGAGGTTGCCGACGGAAATACTCTACCGGTGGA
CGGCTTCGGGAGAATTGAAGTGGATTTGGACCAACCAGGACGTACTACCA
AGATGGTAAGGATGGATGATGTCGCGTACGTGCCTGGACTCTCTCGAAAC
CTGGTGTCTACCGTTAAGGCTGTGGAGCAATGGGGAAAACCGCTAATTTA
TTACAGGAATAGAGCCGTCTTGGGGCTCCCGGGGGAGGAGTCGCTTGTCT
TCAAGTTCTGCTCCCGTAGGGGACTGTTTTCAGCAACAGGCGCGAGACGG
ATCGTGAGGCAGGAGACGTTTTTGGAGGCAAACCTGACAGGAAATGGATC
GGTGAAGATCGCTTCGAGAGCGGCGCTGAGAGCGGCCGCATCCCATGACG
TCATGGAAGTTCACCGCATGCTTGCGCACCCGAGCGAGGCCATCACAAGA
AACACGGCTGCGATGATGGGGATCGAGACGACGGGCCAGTGGGGGGTGTG
TGAGACATGTTTCCAGATCAAACCAGAACGACACGCCGTGCCCAAGAAGA
CGGAACAACGGGCGAGCGTGAAAGGACAGCGATTCTTCGTCGACGTAGGC
GGGCCGATGAAACACTCGAGTCTAGGCGGGAACAATTACGTCGTCATTTT
TGTGGACGACTGCACCCGCTTTAAAGTGGTGAAGTTCGTGAAGAAGAAAA
GTGACGCAACAGCTGCCCTCTTGTCTCTGGTTGCAGACTATATCACACCG
CAGAAGCTGTCGATCGAGTGCGTACGGGCAGACAATGGTGGCAAGTTTGA
GGGAGAATTCCAGCGCGAACTGGACCGGCGCAGCATCACGCACGGGCATA
CCCCGCCAGACACGCCGCAGTACAATGGGGTGGCCGAA
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