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Homology
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: D8LT94_ECTSI (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT94_ECTSI) HSP 1 Score: 520 bits (1339), Expect = 1.100e-177 Identity = 261/298 (87.58%), Postives = 284/298 (95.30%), Query Frame = 2
Query: 89 TLTPDKFADLHGRLMTILSADTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGA--RFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNMPNSDELF 976
+L+ +KFA LHGRLMTILSAD+SD GVNSE LSESFGE+YPLLVDVINSLL+DNRLQLSKGENDT+WYKLVQEEKAKKL+GLTPEQMMIYQVIEKAGN+GIWTRDIKT+T+VNQNT+TK+LKSLE RHL+KT KSVTSKSKKLYMLYELTP K ITGGPWYTDQEFDY+FVKHLS+YVLSYVKEQ+TP LKDIAAAIKVSGISKIDLSMEEVKLIV+TLVYDG LEEVRGA RF+R AGDGPVYKMAP+VEVVNAFTE+PCGTCKVMKHCSE GVVSP+TCVYLAEWLN+PNSDELF
Sbjct: 3 SLSQEKFASLHGRLMTILSADSSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSSYVLSYVKEQETPPLKDIAAAIKVSGISKIDLSMEEVKLIVSTLVYDGLLEEVRGAASRFNRDAGDGPVYKMAPAVEVVNAFTEVPCGTCKVMKHCSEDGVVSPKTCVYLAEWLNLPNSDELF 300
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A7R9U7U3_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7U3_9STRA) HSP 1 Score: 270 bits (690), Expect = 9.690e-81 Identity = 134/274 (48.91%), Postives = 189/274 (68.98%), Query Frame = 2
Query: 149 DTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSR-GAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNMPNSD 967
D +D GV+ E L FG++Y L DV+N++L R+ + + +DT+ YKLV EKA KL GLT EQ +IYQ I+KAGN+GIWTR I T T+V Q LTK+LK LE R LIK+VKSVTS+ KKLYML+E P ITGG WY++ EFD++FV +S +V +Y+K+ ++ +L+DIA A++ +G SK+DLS ++V+ IV +L++DG +E V+ ++ G +GP+Y+ P + TE PCG C V C EGGV+SP TCVY+ WL + + D
Sbjct: 30 DENDGGVSDELLQHEFGKEYGKLADVLNTMLEQRRVTILRAHDDTLVYKLVSAEKASKLQGLTREQELIYQEIKKAGNKGIWTRKITTETNVQQQVLTKTLKLLEQRQLIKSVKSVTSRRKKLYMLFEEVPATEITGGAWYSEGEFDHEFVSSMSQFVYTYIKQGESASLQDIAKAVRETGFSKVDLSTDDVQQIVESLIFDGRVERVQNPILTQMGLDNGPLYRSKPKITTPQFVTENPCGICPVANQCCEGGVISPATCVYMNHWLELDSLD 303
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A067BY85_SAPPC (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BY85_SAPPC) HSP 1 Score: 242 bits (617), Expect = 2.100e-70 Identity = 121/283 (42.76%), Postives = 191/283 (67.49%), Query Frame = 2
Query: 131 MTILSADTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQ-LSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNMPNSDELF 976
+ +L++ T +G + + +SFG+QY L IN L+ ++R++ L +G N V Y+LV +E+++++ GL+ E + IEK+GN+G+WTRDIK T++ + T+ K +++LE+RHL+K VKS++ K+KKLYMLY+L P + ITGGPWY +QEFD+DF+ LS +V +++ + L+ I + SGI+K+ L +E+ IVNTL+YD +EEVR AR + G YK+ V V + +E PCG C V + C++G +VSP TCVYL +W+N+ +D+LF
Sbjct: 8 LDLLASSTEPIG--DDVVRKSFGDQYAKLPVCINRLMGESRIKILMQGSN--VLYQLVTKEESERMQGLSGEHRAVLHEIEKSGNKGVWTRDIKMQTNLPEMTIRKIIRTLESRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSTFVCQFIRAKGVVTLQQITDKVHESGIAKVSLGPDEMMSIVNTLIYDERIEEVRTARLANGEMRDVSYKICRDVSVFDGLSEAPCGVCPVFEQCADGNIVSPATCVYLTKWMNV--ADDLF 284
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A1V9ZF30_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZF30_9STRA) HSP 1 Score: 239 bits (609), Expect = 4.120e-69 Identity = 125/292 (42.81%), Postives = 188/292 (64.38%), Query Frame = 2
Query: 131 MTILSADTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLT----------PEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNMPNSDELF 976
+ +L + T V N + +SFGEQY L IN L+ ++R+++ + T+ Y+LV +E+A+++ GL+ E + IEKAGN+G+WTRDIK+ T++ + T+ K ++ LE RHL+K VKS++ K+KKLYMLY+L P + ITGGPWY +QEFD+DF+ LSN+V +++ + L+ I + SGI+K+ L EE+ IVNTL+YD +EEVR AR + G YK+ V V +A +E PCG C V C++G +VSP TCVYL +W+N+ +D+LF
Sbjct: 8 LDLLGSSTEPVSDN--VIKKSFGEQYAKLPSCINRLVNESRVKILM-QGTTLMYQLVPKEEAERMQGLSYVAVNSNYHWGEHRAVLHEIEKAGNKGVWTRDIKSQTNLAEVTIRKIIRVLETRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSNFVCQFIRAKGVVTLQQITDKVHESGIAKVSLGPEEMMSIVNTLIYDERIEEVRTARLANGEMREVSYKICRDVSVFDALSEAPCGICPVFDQCADGNIVSPATCVYLTKWMNV--ADDLF 294
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A2D4BDY6_PYTIN (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDY6_PYTIN) HSP 1 Score: 234 bits (598), Expect = 1.690e-67 Identity = 115/253 (45.45%), Postives = 170/253 (67.19%), Query Frame = 2
Query: 197 GEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNM 955
G +Y L VIN+L+ + R++ + + Y +V E+A+++ GLT EQ ++ Q IE+AGN+G+WTRDIKT T++ Q +TK+L+ LE+R L+K+VKS++SK+KKLYML++L P ITGGPWY +QEFD+ F+ LS +V +K LK I + SGISK+ L +E++ I+ TL+YDG +EEVR R + GA YK++ + NA +E PCG C V C EG V+SPR+C+YL +WL++
Sbjct: 40 GGEYERLPTVINALMGEGRIKXFQ-RGSVLSYGVVGAEEAERIKGLTIEQRLVLQEIERAGNKGVWTRDIKTHTNIPQQIVTKTLRVLESRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGMSTLKAITDKVHASGISKVALGPDEIRSIIQTLMYDGRVEEVRAVRLTPGANHETKYKISQEISTFNALSETPCGVCPVFDQCQEGNVISPRSCLYLTKWLDL 291
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A024U424_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U424_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.150e-66 Identity = 114/279 (40.86%), Postives = 180/279 (64.52%), Query Frame = 2
Query: 119 HGRLMTILSADTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNM 955
H + L ++D ++ + +SF +Y L VIN L+ D R+++ + +N + Y LV +E+A+++ GLT EQ + IEKAGN+GIWTRDIK T++ + + K+++ LE RHL+K VKS++ K+KKLYML++L P + ITGGPWY +QEFD+DF+ L N+V +++ + LK I + SGI+K+ L +E+ I+NTL+YD +EEVR AR + G YK++ V + ++ PCG C V C++G ++SP TC+YL +WL++
Sbjct: 3 HAKAFLDLLGSSTDA-ISDAQVRDSFRAEYDKLPGVINELVTDGRIKIFQ-QNGNLMYGLVAKEEAERMRGLTVEQRGVLHEIEKAGNKGIWTRDIKAKTNIPEVIIRKTIRLLETRHLVKAVKSISQKNKKLYMLFDLVPSRDITGGPWYNEQEFDHDFIDTLRNFVCQFIRAKGIVTLKQITDKVHESGIAKVSLGPDEMMSILNTLIYDDRVEEVRAARLASGEWREVSYKVSREVTDFDTLSDTPCGVCPVFDQCADGNIISPATCIYLTKWLDI 279
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: K3X6G1_GLOUD (DNA-directed RNA polymerase III subunit RPC6 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6G1_GLOUD) HSP 1 Score: 228 bits (582), Expect = 3.090e-65 Identity = 114/267 (42.70%), Postives = 173/267 (64.79%), Query Frame = 2
Query: 155 SDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNM 955
+D V +E GE Y L V+N L+ + ++++ + N + Y ++ E+A+++ GLT EQ ++ Q IE+AGN+GIWTRDIKT T++ Q +TK+L+ LE R L+K+VKS++SK+KKLYML++L P ITGGPWY +QEFD+ F+ LS +V +K T L I + SGISK+ L EE++ I+ TL+YDG +EEVR R + G YK++ + N +E PCG C V C EG ++SPR+C+Y+++W+ +
Sbjct: 24 TDAEVREYFQAEGQGE-YEKLPSVLNVLMSEGKIKIFQKGN-VLSYGVIGAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKTHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGTSTLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRTVRLTPGVSHETKYKVSHDISTFNYLSETPCGVCPVFNQCQEGNIISPRSCLYISKWVEL 288
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A6G0WWY0_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWY0_9STRA) HSP 1 Score: 227 bits (579), Expect = 6.310e-65 Identity = 111/279 (39.78%), Postives = 182/279 (65.23%), Query Frame = 2
Query: 119 HGRLMTILSADTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNM 955
H ++ L A +SD ++ + E+F ++Y L VIN+L+ + R+++ K +++ Y LV +E+A+++ GLT EQ+ + + IE +GN+GIWTRDIKT T++ + + K++K LE R LIK VKS+ K++KLYM ++L P + ITGGPWY +QEFD+ F+ L ++V ++K + LK I + SGI+++ L +E+ I+NTL+Y+ +EEVR R + G YK++ V ++ +E PCG C V C++G ++SP TCVYL +WL++
Sbjct: 3 HAKVFLDLLASSSDA-ISDAKVRETFHDEYAKLPPVINNLMREGRIRIFKQGANSLMYGLVAKEEAERMRGLTAEQIAVLREIEGSGNKGIWTRDIKTKTNIPEVIIRKTIKILETRQLIKAVKSIAQKNRKLYMKFDLDPSRDITGGPWYNEQEFDHGFIDALRDFVCGFIKAKGVVTLKQITDQVHESGITRVSLGPDEMMSILNTLIYEERVEEVRAIRIAHGEVGEVKYKVSKDVSDFDSLSETPCGICPVFDQCADGNIISPATCVYLTKWLDI 280
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A485KM43_9STRA (DNA-directed RNA polymerase III subunit RPC6 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KM43_9STRA) HSP 1 Score: 224 bits (572), Expect = 7.440e-64 Identity = 115/285 (40.35%), Postives = 181/285 (63.51%), Query Frame = 2
Query: 119 HGRLMTILSADTSDVGVNSEALSESFGEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLT------PEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNM 955
H + L + +SD ++ + E+F ++Y L VIN L+ D R+++ + N+ + Y LV +E+A+++ GLT EQ + IEK+GN GIWTRDIKT T++ + + K+++ LE R L+K VKS++ K+KKLYM+++L P + ITGGPWY +QEFD+DF+ L N+V ++K + L+ I + SGI+K+ L +E+ I+NTL+YD +EEVR AR + G YK++ V + +E PCG C V C++G V+SP TC+YL +WL++
Sbjct: 3 HAKAFLDLLSSSSDA-ISDAQVREAFRDEYGKLPAVINELMGDGRIKIFQQGNNLM-YGLVAKEEAERMRGLTYDSGTCVEQRAVLHEIEKSGNTGIWTRDIKTKTNIPEVIIRKTIRLLETRQLVKAVKSISQKNKKLYMMFDLVPSRDITGGPWYNEQEFDHDFIDTLRNFVCQFIKAKGIVTLQQITDKVHESGIAKVSLGPDEMMSILNTLIYDERVEEVRAARLASGEWRDVSYKVSKEVSDFDTLSETPCGVCPVFDQCADGNVISPATCIYLTKWLDI 285
BLAST of mRNA_F-serratus_M_contig130.2237.1 vs. uniprot
Match: A0A0W8DBA8_PHYNI (DNA-directed RNA polymerase III subunit RPC6 n=24 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DBA8_PHYNI) HSP 1 Score: 224 bits (572), Expect = 7.910e-64 Identity = 114/257 (44.36%), Postives = 166/257 (64.59%), Query Frame = 2
Query: 197 GEQYPLLVDVINSLLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQGIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYELTPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKVSGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSVEVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNMPNSD 967
G Y L DVIN+LL + ++++ K + + Y +V E+A+++ GLT EQ ++ Q IE+AGN+GIWTRDIK+ T++ Q +TK+L+ LE R L+K+VKS++SK+KKLYML++L P ITGGPWY +QEFD+ F+ LS +V +K L I + SGISK+ L EE++ I+ TL+YDG +EEVR A YK++ + N +E PCG C V C EG V+SPR+C+Y+ +WL + D
Sbjct: 41 GGGYEQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGMSTLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRSASHE------VKYKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKELD 290
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 525.4 |
| Seed ortholog evalue | 1.7e-146 |
| Seed eggNOG ortholog | 2880.D8LT94 |
| Preferred name | POLR3F |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K03025 |
| KEGG Reaction | R00435,R00441,R00442,R00443 |
| KEGG Pathway | ko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169 |
| KEGG Module | M00181 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006359,GO:0006383,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051240,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141 |
| EggNOG free text desc. | transcription by RNA polymerase III |
| EggNOG OGs | COG5111@1,KOG3233@2759 |
| Ec32 ortholog description | RNA polymerase Rpc34 |
| Ec32 ortholog | Ec-12_005690.1 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01611,ko00000,ko00001,ko00002,ko03021 |
| Exons | 10 |
| Model size | 2351 |
| Cds size | 894 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929253.837702-UTR-F-serratus_M_contig130:212903..212988 | 1622929253.837702-UTR-F-serratus_M_contig130:212903..212988 | Fucus serratus male | UTR | F-serratus_M_contig130 212904..212988 + |
| 1690962770.2185185-UTR-F-serratus_M_contig130:212903..212988 | 1690962770.2185185-UTR-F-serratus_M_contig130:212903..212988 | Fucus serratus male | UTR | F-serratus_M_contig130 212904..212988 + |
| 1622929253.9679148-UTR-F-serratus_M_contig130:227181..228506 | 1622929253.9679148-UTR-F-serratus_M_contig130:227181..228506 | Fucus serratus male | UTR | F-serratus_M_contig130 227182..228506 + |
| 1690962770.333095-UTR-F-serratus_M_contig130:227181..228506 | 1690962770.333095-UTR-F-serratus_M_contig130:227181..228506 | Fucus serratus male | UTR | F-serratus_M_contig130 227182..228506 + |
| 1622929253.9792705-UTR-F-serratus_M_contig130:228524..228571 | 1622929253.9792705-UTR-F-serratus_M_contig130:228524..228571 | Fucus serratus male | UTR | F-serratus_M_contig130 228525..228571 + |
| 1690962770.3434613-UTR-F-serratus_M_contig130:228524..228571 | 1690962770.3434613-UTR-F-serratus_M_contig130:228524..228571 | Fucus serratus male | UTR | F-serratus_M_contig130 228525..228571 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929253.8559222-CDS-F-serratus_M_contig130:212988..213060 | 1622929253.8559222-CDS-F-serratus_M_contig130:212988..213060 | Fucus serratus male | CDS | F-serratus_M_contig130 212989..213060 + |
| 1690962770.2405622-CDS-F-serratus_M_contig130:212988..213060 | 1690962770.2405622-CDS-F-serratus_M_contig130:212988..213060 | Fucus serratus male | CDS | F-serratus_M_contig130 212989..213060 + |
| 1622929253.8667598-CDS-F-serratus_M_contig130:223753..223843 | 1622929253.8667598-CDS-F-serratus_M_contig130:223753..223843 | Fucus serratus male | CDS | F-serratus_M_contig130 223754..223843 + |
| 1690962770.254882-CDS-F-serratus_M_contig130:223753..223843 | 1690962770.254882-CDS-F-serratus_M_contig130:223753..223843 | Fucus serratus male | CDS | F-serratus_M_contig130 223754..223843 + |
| 1622929253.8772647-CDS-F-serratus_M_contig130:224573..224662 | 1622929253.8772647-CDS-F-serratus_M_contig130:224573..224662 | Fucus serratus male | CDS | F-serratus_M_contig130 224574..224662 + |
| 1690962770.2681732-CDS-F-serratus_M_contig130:224573..224662 | 1690962770.2681732-CDS-F-serratus_M_contig130:224573..224662 | Fucus serratus male | CDS | F-serratus_M_contig130 224574..224662 + |
| 1622929253.8885279-CDS-F-serratus_M_contig130:225082..225176 | 1622929253.8885279-CDS-F-serratus_M_contig130:225082..225176 | Fucus serratus male | CDS | F-serratus_M_contig130 225083..225176 + |
| 1690962770.2752264-CDS-F-serratus_M_contig130:225082..225176 | 1690962770.2752264-CDS-F-serratus_M_contig130:225082..225176 | Fucus serratus male | CDS | F-serratus_M_contig130 225083..225176 + |
| 1622929253.902392-CDS-F-serratus_M_contig130:225413..225519 | 1622929253.902392-CDS-F-serratus_M_contig130:225413..225519 | Fucus serratus male | CDS | F-serratus_M_contig130 225414..225519 + |
| 1690962770.2828426-CDS-F-serratus_M_contig130:225413..225519 | 1690962770.2828426-CDS-F-serratus_M_contig130:225413..225519 | Fucus serratus male | CDS | F-serratus_M_contig130 225414..225519 + |
| 1622929253.9157267-CDS-F-serratus_M_contig130:225779..225886 | 1622929253.9157267-CDS-F-serratus_M_contig130:225779..225886 | Fucus serratus male | CDS | F-serratus_M_contig130 225780..225886 + |
| 1690962770.2906513-CDS-F-serratus_M_contig130:225779..225886 | 1690962770.2906513-CDS-F-serratus_M_contig130:225779..225886 | Fucus serratus male | CDS | F-serratus_M_contig130 225780..225886 + |
| 1622929253.9259598-CDS-F-serratus_M_contig130:226307..226460 | 1622929253.9259598-CDS-F-serratus_M_contig130:226307..226460 | Fucus serratus male | CDS | F-serratus_M_contig130 226308..226460 + |
| 1690962770.2989252-CDS-F-serratus_M_contig130:226307..226460 | 1690962770.2989252-CDS-F-serratus_M_contig130:226307..226460 | Fucus serratus male | CDS | F-serratus_M_contig130 226308..226460 + |
| 1622929253.9404662-CDS-F-serratus_M_contig130:226741..226825 | 1622929253.9404662-CDS-F-serratus_M_contig130:226741..226825 | Fucus serratus male | CDS | F-serratus_M_contig130 226742..226825 + |
| 1690962770.3100703-CDS-F-serratus_M_contig130:226741..226825 | 1690962770.3100703-CDS-F-serratus_M_contig130:226741..226825 | Fucus serratus male | CDS | F-serratus_M_contig130 226742..226825 + |
| 1622929253.9535902-CDS-F-serratus_M_contig130:227082..227181 | 1622929253.9535902-CDS-F-serratus_M_contig130:227082..227181 | Fucus serratus male | CDS | F-serratus_M_contig130 227083..227181 + |
| 1690962770.3213177-CDS-F-serratus_M_contig130:227082..227181 | 1690962770.3213177-CDS-F-serratus_M_contig130:227082..227181 | Fucus serratus male | CDS | F-serratus_M_contig130 227083..227181 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2237.1 >prot_F-serratus_M_contig130.2237.1 ID=prot_F-serratus_M_contig130.2237.1|Name=mRNA_F-serratus_M_contig130.2237.1|organism=Fucus serratus male|type=polypeptide|length=298bp
MTLTPDKFADLHGRLMTILSADTSDVGVNSEALSESFGEQYPLLVDVINS LLMDNRLQLSKGENDTVWYKLVQEEKAKKLVGLTPEQMMIYQVIEKAGNQ GIWTRDIKTSTSVNQNTLTKSLKSLENRHLIKTVKSVTSKSKKLYMLYEL TPPKAITGGPWYTDQEFDYDFVKHLSNYVLSYVKEQQTPALKDIAAAIKV SGISKIDLSMEEVKLIVNTLVYDGELEEVRGARFSRGAGDGPVYKMAPSV EVVNAFTEIPCGTCKVMKHCSEGGVVSPRTCVYLAEWLNMPNSDELF* back to topmRNA from alignment at F-serratus_M_contig130:212904..228571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig130.2237.1 ID=mRNA_F-serratus_M_contig130.2237.1|Name=mRNA_F-serratus_M_contig130.2237.1|organism=Fucus serratus male|type=mRNA|length=15668bp|location=Sequence derived from alignment at F-serratus_M_contig130:212904..228571+ (Fucus serratus male) CACACCACACGCCACACGCCAGGCGAACAACCCTGCCGCGAAGTTATCTG
TACCACATGGCGAGAACCGCTTCAGCTCCTGGAAGATGACTCTGACTCCT
GATAAATTTGCTGACCTCCACGGGCGCCTGATGACTATCCTCTCAGCTGA
TACCAGCGTAAGTTGGCATGTTCCGGAAACCTCAGTGTGGCGGTCCGGGA
ATGTGCAATAGGATTTGTTACAAAGTTAGCTCTATACTATAATAGTAAGA
CATTCCCAAACCATTTTCTCGAGTAACGTACTTGTATGTATGTCCATACA
TATAGCAAGAATATGGATCAATCGGGTAGGTACGCGTGGTCAGCTGAACA
GAGAGAATGAACATTTCCCTGTCCGCGTTCGCACCAGATAATTTGGTCTT
GCGAGACGGGTCCGGCAGTTCCATCCCGCGTCAGCCTGCTCATGTCCATA
CTCAGGCTGAATCTGATGCTTACTTACGAGGTTCTTCCCGAGTTCCGTGG
CGGCGTCCATTTTAAACCGCCATACGCCATTGGGCCAGTCCCGAATTTAT
CGGGTCACGCAATTTCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGG
CACAGGGCCAGTAGACCTCAAGGTAGTTTCGAACGAGTGCTGCTTTGGCA
AGTAACCATGGACCAATTATTGTACGCCTCTGTCTCCCACACCCACTATT
GGCATGAAGTGGGCATGTTGAAAGTACCAACACGGGTGAAGCAAAGGCCA
GTTCCGCCGTACCCCTTCGGTCCAAGTGCGTTCGTTGGATCAACCACGGA
CCTTGCGTGTATCTGTAAAAAAATACCCCCCTTTTGGCGTCGCGTTGACA
GCCCTCACGATTTCAGAAACCCGAGCTCCCTGAGTACAGCCGCATCTCAT
CTCAACCTGTTGACCAATACACGTATAGCCCTATTACTTCACAAGGATAT
TCATCCTTGTACAGATAGTAGTATTAATAGTGTAGCAACCACGTATATTG
CTGGTTATGGTTGAGGCCCGATCGGTTAATGTGAAGAATACAACAACAAT
AACAACGACGGATGGGCCTCAACATGCTAGGTGTATCACCAATCCCAGTT
GCCTTCATGTCTGTGGTCACGAAGGATCTTGCCATCTCTTTCCGGTTCTC
GCCTACCCTACATTTGTTTCGCCATGCGAGTTCAGTACGCTTGCACCTCG
GTTGAATTTGACCTACAGTACTCACGTTCTAACGCTTTCCGCGCTACGAA
AACCAAAAAAAAATAAAGAAATCATCTTCGTCGAGATTCGATTTCACTAA
TCCCCACATGTCCTCGACTTTACTTTCAAATTGGGTCTATAGGAAAAAAG
AGAGGCACATTGATCCACGGTGATACCTGAAAAGATAGCATGGTTACTGG
AACTACCTTGAGGACTACCCATGTGCCGGTGGACTATCTGTACGCAATTG
TGGCTCTTATAAACTCGGTACTGACTCGACGAGGGTTGACGGTATAAGTG
GCCGCCGCCGCGGAAAGTGGGAGGAATCTCTTGAGTAAGCACCAGGTTAG
CTGTACCGTGGAGAATGAGGAGGCTGACGAGGGACGAGACGAACCTACCT
CGCGAAACCACATTCATAGGCGCGAGCAGGGACAGGGAAAAACATGTTTT
TCCTGTTTAGGTGACCACCAGCAGGATTGGCAGCCTTGCCCGGTTGATCC
GTACTCTTGACCATACTCCAGTCGGGCGAAAACATTGCATTATAATACCC
ACCACAACCAAAAACAATGTACTGTATAATAGTACATAATTAGATAGGAT
AGTAATAGTAATAATATACGATAATAATAGTGCCATCGCACCATACAGCA
ATAGGGGCTAATAGTCTATAGAACACAGGAAACGTTATGATATTATAACC
AATGACGAGCAGTACATTTTGCTTAAAGGTATAGGACACCTGCTGGTAGT
GGTAAATACTATAATAAAGGTTTGGTCTTGACAGTCCTGTGCTGCTCGCG
CTACTTTACATGGGCCAGCCACCATGATCACTCATTTTAAGGATTGACGC
CTTCTTCGTCTCTAACATTGGTGTTGGGAAGTACCAAACTAGAGGACCAC
AATCGTAGATACCTTCGAGGTAATCCAGCAAGTACGAGACAACGGTATTC
ACCTGAAAGACTCACTAATAGTAGACGAAGAGCCCAAGAGGAGTAGAGGG
CCACAACACTAATAGAGAAGTGAGAGGCAGGTAGGTGGGCAGAGAACACA
CGTATACCTGTAATAAAGCTACCACCTGTCTGCTCCATAACACCAACTCT
TAAGTCAGCTACAGTACTGTACGAGACTGTACGAGCAAAGGTTGGTAGGT
CATACTGTGAGCATACGACGGTTTCACAAGTACACGTATTCGTACTATTT
TAATATTAATATTAATACTGCTTCATCGGTAGGGAAGCCTGAGAACCCTG
ACAGTACGGTGTTGTACATCCCAGGTAGATGTTATGGCTTGGGTTCAAAT
GCGAGGTACTGTAGTTACGATCCGTGGGAGGCATCGGATGGCTCGCGGCT
GGCGATTCACCAAACCCTCCTGTTGAGTTGTCGGCCAAACCATTGGACTT
CTGAGTCACGTGGCTGTGACTCAGTAGTCCAATGGTTTGGCCGACAACTT
ACAAAATATATGCATTTGGGCTCTCTGGCATCTTTTCCGGTAGTGACAGT
GATCTATCTATCTCCGGGGGGACCTCTCCTCGTCACGCTATGCCGTATCT
CAATGTTTGCACAACTATTAACTTATTTTTCCCTTTTTTTATCCTTTTGT
CGCTACCGGGGATTGAAACCGCGACTTATCTTCTGTTAATAGTCGGCCAA
ACTATTGGACTACTGAGCCACATGTGGCTGTGGAAACCCGAGTCCGGTTC
TCGAATTGGTTGAAGGTTCTTGACCCCCTTTGCCAGCCCAGAGCTGATGA
TTGTGGGATCTTCCGACGCCCGCCCGACCACGTAGCCCTTCCCAGGATGT
CCGGGACAGGAGGACACCGGATAGTTTGATCCTCAGACAGGTTGAAGGTT
CCTGGCCCCTCTTTGCCAGCTCAGAGCTGACGGAAAATCAGCGCTGGGCC
GGAAAAGAGGGGTCATGAACCTTCAATATGTTCAAAGATCAAACAATCAG
GTATTATCCTGTCACGGACATCCTAGGAAGGGCTACGTGGTCGGGCGGAT
GTCGGAAGATCCCCCACCGTGAGCAGCTCTGGGCCGGCAAAGAAGGGCCA
GGAACCTTCAACGAATACGTGAAGGAAGTACCAAACGCAAAGCGGTACGA
CGAGGTGGAGGAAGTGAAGTAAGGAAGCATGGTCGAAGGGAGGAAGGAAG
GAAGGAAAAGTGAAAAGAAAAAAAATACTGTTATAACAAATATTGAGATA
CAGTATACTGCAGTGCGTGGCGAgGGGAGGTTCCTGATAACTGAGTATTA
ATAGTCCAATGGTTTGGCCGACAACTTGCAAAATATATGTCTCGGGCTCT
CTGCCCTCTTGTCCGGTAGCGACAGTGATCTCCGGGGACGTCACGTCGCC
ACGCATTGCAGTATCTCAATGTTTTCCACAAACAACTTACTTTTTTCCCT
TTTTGTTTAAGTATATATTTTGGTCGCTACCGGGGATTAAAACCGCGACT
TATCTTTTGTTAATTGGCGGCCAAAGCATTGGACTACTGAGTCGCATGTG
GCTGTGGAAACCCGAGTTCGATTCTCGGGTTGGTTGAAGGTTCCTGGCCC
CTCTTTGCTGCCCCAGAGCTGCTGATGATGGGCTCTTCCGACGCCCGCCC
GACCACGTAGCCCCTCCTAGGATATCCGGGACAAGATGATACCGGATAGC
TTGATCCTCAGACAGGTTAAAGGTTCCTGGCCCCTCTTTGCCAGCCCAAA
GCTTATGGAAAATCAGCTCTGGGCCGTCAAGCAGGGGCCAGGAACCCTCA
ATATATCCGAAGATCAAACTATCCGTTATTAATCTGTCCCGGACATCCTA
GGAAGGGCTACGTGGTCGGGCGGATGTCGGAAGATCCCACCATGAGCAGC
TTTGGGCCGGCAAAGAAGGGCCAGGAACCTTGAACCAACACATGAAGGCA
GTACCGAACGCAAAGCGGTACGACGAGGTGGAGGAAGGAAGGAAAAGAAA
AAGGAAAAAGTTATTTGTGGCAAATATTGAGATACAGTATACTATAGTGC
GAGGCGAAAGGAGGTCCCCGGAGATATATCACTGTCGCTACCGAAAAGAG
GCCAGCGAGCCCAAGACATATATTTTGTTAGTTGTCGGCCAAATTATTGA
ATTATCTCTGGCCTCTTTTCCGGTAGCTACAGTGATCTCCGGACCTCCTC
TCGCCACGCATTGCAGTATCTCAATGTTGGCCACAGCTAACTTTTTTATT
TTATTTTTATATTTTGGTCGCTACCGGGGATTAAAACCGCGACTTATATT
TTGTTATTTATCGGCCAAACCATTGGACGACTGAGTCGCATGTGGCTGTG
GAAACCCGAGTTCGATTCTCGGATTGGTTGAAGGTTCCTTGCCCCTCTTT
GCCGGCCCAGAGCTGATGATGGTGGAATCTTCCGACGCCCGCCCGACCAC
GTAGCCCTTCCTAGGATGTCCGGGACAGGGTGATGCCTGATAGTTTGATC
CTCAGACAGGTTGAATGTTCCTTGCCCCTCTTTACCGGCCCAGAGCAGCT
CTGGGCCGTCAAACAGGGGCCATGAACCTTCAACCTGTCCGAAGATCAAA
CTATCAGGTATCGCCCTGCATCGTTTAACCTAGGAAGGGCTACGTTGTCA
AGCGAGCGTCAGAAGAGCCCACCATTAGCAGCTCTGGGCCGGCAAAGAGG
GGCCAGGAACCTTCAACCAACACATGAAGGAAATACCGAACGCAAATATG
TACGAAGAGGTGGAAGAAGTGAAGTAAGGAAGAATGGAAGAAGTAAGGAA
GATAAAAAGGAAAAAGTTAGTTGTGGCAAATATTGAGATACAGTATACTG
TAGTGCGTGACGAGGCGAGGTTTCCGGAGATACATCACTGTCGCTACCGG
AAAAGAGGCCAGAGAGTCCAAGACATATATTTTGTTAATTGTCGGCCAAA
CCATTGGACTACTGAGTCACATGTGGCTGTGGAAACCCGAGTCCGATTCT
CGGATTGGTTGAAGGTTCCTGGCCCCTCTTTGCCGGCGTAGGGCTGATCA
TGGTGGGATCTTCCGACGCCCGCCCGACCACGTAGCCCTTCCTAGGATGT
CCGGGACAGGCTGATACCGGATAGTTTGATCCTCAGACAGGTTGGAGGTT
CCTTGCCCCTCTTTGTCGGCCCAGAGCTGATGTGGGCCGTCAAACAGGGG
CCAGGAACCTTCAACCTGTCCGAAGATTAAACTATCGGGGTATCGCCCTG
TATCGTTCATCCTAGGAAGGGCTACTTGGTCGGGCGGGCATCGGAAGATC
CCACCATCATCAGCTCTGGACCGACAAAGAGGGGCAAGGAACCTTGAACG
AATACGTGAAGGAAGTACCGAACGCAAATAGGTACGCCGAGGTGAAGGAA
GTGAAGTAAGGAAGAATAGAAGGAAGGGAAAATAAAAAGGAAAATATTGA
GATACAGTATGCTGCAGTGCGTGGCGAGGAGACGTCCCCGGAGATCACTG
TCGTTACCGGAAAATTTTGTTAATTGTCGTCCAAACCATTGGACTACTGA
GTCGCATGTGGCTGTGGAAACCGAGTTCGATTCTCGGATTGGTTGAAGGT
TCCTGACCCCTCTTTGCCGGCCCAGAGTTGATCATGGTGGGATCTTCCGA
CGCCCGCCCGACCACGTAGCCCTTCCTAGGATGTCCGGGACAGGGTGATG
CCTGATAGTTTGATCCTCAGACAGGTTGAATGTTCCTTGCCCCTCTTTAC
CGGCCCAGAGCACCTGTTTGACCCTTCAACCTGTCCGAAGATCAAACTAT
CAGGTATCGCCCTGCATCGTTCAACCTAGGAAGGGCTACGTGGTCAAGCG
AGCGTCAGAAGAGCCCACCATTAGCAGCTCTGGGCCGGCAAAGAGGGGCC
GGGAACCTTGAACCAACACATGAAGGAAGTACTGAACGCAAAGATGTACG
AAGAGGTGGAGGAAGTGAAGTAAGGAAGAATGGAAGAAGTAAGGAAGATA
AAAAGGAAAAAGTTAGTTGTGGCAAATATTGAGATACAGTATACTGCAGT
GCATGGCGAGGGCAGGTCCCCGGAGATATATCACTGTCGCTACCGGAAAA
GAGGCCAGAGAGCCCAAGACATATATTTTGTTAATTGTCGGCCAAACCAT
TGGACTACTGAGTCACATGTGGCTGTGGAAACCCGAGTCCGATTCTCGGA
TTGGTTGAAGGTTCCTGGCCCCTCTTTGCCGGCGTAGGGCTGATCATGGT
GAGATCTTCCGACGCCCGCCCGACCACGTAGCCCTTCCTAGGATGTCCGG
GACAGGATGATACCGGATAGTTTGATCCTCAGACAGGTTGGAGGTTCCTT
GCCCCTCTTTGCCGGCCCAGAGCTGATGTGGGCCGTCAAACAGGGCCAAG
AACCTTCAACCTGTCCGAAGATTAAACTATCGGGGTATCGCCCTGTATCG
TTCATCCTAGGGAGGGCTACTTGGTCGGGCGGGCGTCGGAAGATCCCACC
ATCATTAGCTCTGGAGCGACAAAGAGGGGCAAGGAACCTTGAACGAATAC
GTGAAGGAAGTACCGAACGCAAATAGGTACGCCGAGGTGGAGGAAGTGAA
GTAAGGAAAAATGGAAGAAGGAAGGAAAATAAAAAGGAAAAAGTTAGTTG
TGGCAAATATTGAGATACAGTATACTGCAATGCGTGGCGAGGGGACGTCC
CCGGAGATCACTGTCGCTACCGGAAAATTTTGTTAACTGTCGTCCAAACC
ATTGGACTACTGAGGCGCATGTGGCTGTGGAAACCGAGTTCGATTCTCGG
ATTGGTTGAAGGTTCCTGACCCCTCTTTGCCGGCCCAGAGTTGATGATGG
TGGAATCTTCCGACGCCCGCCCGACCACGTAGCCCTTCCTAGGATGTCCG
GGACAGGGTGATGCCTGATAGTTTGATCCTCAGACAGGTTGAAGGTTCCT
TGCCCCTCTTTACCGGCCCAGAGCAGCTCTGGGCCGTCAAACAGGGGCCA
TGAACCTTCAAACTGTCTCGAAGATCAAACTATCAGGTATCGCCCTGCAT
CATTCAACCTAGGAAGGGCTACGTGGTCAAGCGAGCGTCAGAAGAGCCCA
CCATTAGCAGCTCTGGGCCGGCAAAGAGGGGCCAGGAACCTTGAACCAAC
ACGTGAAGGAAGTACCGAACGCAAATAGGTACGACGAGGTGGAGGAAGTG
AAGGAAGGAAGAAAAAAAGGAAAAAGTTAGTGGCAAATATTGAGATACAG
TATACTGCAGTGCATGGCGAGGGTAGGTCCCCGGAGATATATCACTGTCG
CTAACGGAAAAGAGGCCAGAGAGCACAAGACATATATTTTGTTAATTGTC
GGCCAAACCATTGGACTACTGAGTCACATGTGGCTGTGGAAACCCGAGTT
CGATTCTCGGATTGGTTGAAGGTTCTTGGCCCCTCTTTGCTGGCCCGGAG
CCGATGATGGTGGGATCTTCCGACGCCCGCCCGACCACGTAGCTCTTCCT
AGGATGTCCGGGACAGGCTGATACCGGATAGTTTGATCCTCGGACAGGTT
GAACGTTCCTTGCCCCTCTTTGCCGGCCCAGAGCTGATGTGGGTCGTCAA
ACAGGGGCCAAGAATTTCAATATGTCCGAAGATCAAACTATCGGGGTATC
GCCCTGTATCGTTCATCCTAGGAAGGGCTACGTGGTCGAGCGAGCGTCAG
AAGAGCTCAACATCAGCAGCTCTGGGCCGGCAAAGAGGGGCCAGGAACCT
TGAACCAATACGTGAAGGAAGTACCGAACGCAAAGATGTACGAAGAGGTG
GAGGAAACGAAGTAAGGAATAATGGAGGAAGGAAGGAAAGATAAAAAGGA
AAAAGTTAGTTGTGGCAAATATTGAGATACAGTATAGTATACTGCAGTGC
GTGGCGAGGGGAGATCACTGTTGCTACCGGAAAAGAGGCCAGAGAGCCCA
AGACGTATCCTTTGTTAGTTGTCGGCCAAACCATTGGAGTACTGAGTGTC
ACGTGACTCAGTTGTCCAATGGATTGGCCGACAAATAACGCCTCCTTATC
AATAGTTATTAATATACGGTAATAGTGAGTGCCTCTTTTCGTGCTGCGCA
CGTGCATATAATCTTAACAGTATGCTATCTCAAGGTCATGCATCCGTTTC
ATAGATGCGTTCTCTGCGCGGTCTCTGCGTCCCTACATACTTTGTACTCG
TACGGTATCCTTTCGAGTATTGACTTTTTTTTGTTTTTCTTCCTTCCCTT
TTCATGCTCTCGTTGTCCTTCCTTCCCTTTGGAAACGTTCTTCTGGTATG
CGTTGTCCAGCAGTCCACGTGCCGGATTAGTAATTCGCAACCAGGTGGTC
TCCCGGGATTCTTGTTTTCGCCTGTACAAGCTAAAATAGCTTGACGACGG
TCGTGGTCATGACGCGCAAGCGAAGGAGTGTTTTTGGTTATGACACATCC
CTTCATATCTTTTTCTAGTCCGGTTAGTGCCCACGTTTTTGTTGTTGTTG
TTTTTTGTGCTGCCAGATGGGCACGGTGGACCCAACCCGACTCTAACGCT
AACGCTATCACCCGAACCTCCTTACTATACCCCAGGTGACCGCGAGGTTC
CACTCCATTGTGCTATTAATAGCGTTTGGTGACAGCACCCTGGCAACCTA
CTTGGTACGAGCCCTGTAAAGCTGACAGACTAGACTGCCGTTTAGCGACT
GTGTAGAACCACCATCGAAGCACCGCACGCGATGGAAACCCAGGGAAACT
ACTATCCAGCGCCCCTCCCCTTTTGTCCGCTTTTTGGTCCTTTTTGGTTC
TTCAGCCATGAATTGGGACCACGCGGCCAGCTGGGGTAGGAGAGTCTGGG
TTAGCGTTAGCGCTATTGGTCGGGTTGGCCATACCGGAAATGGTGGTTGG
CCAACTGAAATTGAAAGAAAAAACAGAAAACGAGTGTTTTGCTGTTTGGC
TTGGGTGGTAGTTCGACAAAAACACACACATGTGTGACAAATAGGCGCTC
AATAAAGTCTCCACGAAGCGGGCATACTTCCTGGAATAATCCCCAGCTTA
GATAAGAACCAGTTCAAGGTCTACTGTACTGTCTTTTAATTAACAGTTCG
ACAACAGGGATAAAAAGAGGGTTATAGGAGGTACCTGGTACTGTATACAG
ACACGAGGCATGCGACTTTCGAGATACCGTGTGAGTTTCTCCTCGATATT
GTACTCTCTGTTGGCCCTTTCGCGACCAAAATATCGGGGAACCTGTTGAA
TAAAAAATTCCACGAGGAGTATTGAAGAAAAATCTGAACTAACGCATCTA
GACCTTCTGAGTATCATCATCCCACAGTCAGGGGGCAAGAAATTTCAAAA
CGTTTAGGTGGGGATCTGTTGTCCGTTGGAATTGGCCAATGTCCCCACCT
ACCGTATTATAAACGTTTCGACACGATAACCCCGGACGGTGTGGAGGCTA
TTGTATTATATATTTATCGGAAAATTTGGATGCCTCCAGATTTTTCTACG
AACCATTGGTGTGGCGGCGAGATTATAATGCCGCTGGGCTAATTGGGCGG
TGAAGGTATCATCATACTTTGGAGTGCGGTGGCAGTGCTTGTACTTACTC
GCTTTGCCTCTGGATCTCTCGCTCTCGTTCAAATACCGTCGGTAGTACTT
GCTGTTATACACCAGTATGTACTAAATAAATCCGAGCACCGCGAAACGCC
TCCTTGTGCGATTCTAGAGTGACTTCTGCGACGTTGAAAACACGTCGACA
TATGAAACATAATATATATATATATATGATATTGGAAATATGAAACCATG
GACTGCAAGACGGCGTGTAGATGTTCGGAGGATGGCTTCGAGAGTTTTTA
GAACTTTCAAGAAAACGATACGATACAATCAATACTATCAATGATTAGAT
ACTATCAATACTATCAATGATTAGATACTATCAATACTATCAATGATTAG
ATACTATCAATACTATCAATGATACGATAATATCAATACTGTCAATGATA
TTACTACTAGTACTAGTACTACTGCTCTTGTTGTCGATATGAGTACCACA
CACCGTACCGTTTTGTATATGTATGTATGTACTGTATGTATGTATGGTCA
GCACTTTCAGCAGATATGTGCCAGGTAGTAAACGATCTACGGCTACAAGA
TTGCGCGTTTTTTTTCGAAGGTATTTTTTCAGATCTGGAAGCAATCGATC
GTCGCCGACGGCCCGTAGCTTTAAAAGTGTAACAAATCCGTAGAGCCAGT
TTTACTCGCTTTTGTAATACAGCCAGGACGCAGAAATCCACTGTTTTGAA
AAATCGCTTGAGAGTTGCAAGAGAACCCTGCGTTGTGCTTTTGACCGCGC
GGAAAGTTGCGCACACAGCCCCAAGCAATCTACCTGGTATAATGTTTTTC
GAATAACCGTTAGAAGCAGGTTCGTTCTCTTCGAATGAAGGTGCAATAAG
CATCAACCGCCGGTAGCCTTCGTGCTAAAGATCCCCTTGGATGTTGATGT
GACCAACCAAGTGTCTATAACCTGTATGAAACAATTGGCTCTAATTGCTT
ATCCTCAAAACGGTGCGTTTGACGAGGATTCCCCCCCCCCCCCCACCCCC
TTCCTCGTTTTCGTTGCGTTGTAACCTTTCCCTCGTTTTCGCCACGTGTG
TCGACCCGGGGCACTTCTTGGGGTGCGCGTGCGCGCTCGCTGGTGGGCAG
GATGTTGGAGTCAACAGCGAGGCGCTGTCGGAGAGTTTCGGGGAGCAGTA
CCCCCTCCTGGTGGACGTGATCAACTCTCTCCTCATGGACGTGCGTGTGC
CCTCGACATGCTCTCTTCACAGTCGATCCCAAATGGTTGCCTCCTTGTTC
TGCGCCGTGACAGTGGTATCCTCCACGTAGGTAACTGCCCTTGTTATATA
TATATTATATATATAAAAAATATATAAATGCCCTTGCTCTTCGCGGCCTA
ACTCTTCGTGTGTCACCACAGCATCGCCTTCTAAGGAGAAGAAAAAATCG
TGGTTGTGTCGGCTCGCCGTGTCTAGTACCACGGCATCGCCTTTAAAAAA
ACAAACAGAAAAACGACTGTGTCGTGGGTGCTCTCGCGGCGTCAACACGA
TTTTGTATTTTTGAAGCACTGAAAGCATTCATTCAGTCTGGCGCGGAGTA
CAGCGCACGGAGCCTTGCACCCCGAACCTATGCTAAGGTCACTGGGTTTG
AGGCAAAAGTAGATTGTTGTATCTGGCTTCACAAAATCGCTATTATATAT
AGTGATGTTCCGAGGTGATGAAACTCGCCCGCACTGCGAAGACGGTTTTT
ACTGCATAACGGACACCCGAATCCTCGCTATGATCTTGATAGATAGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTACCTTATTGTTCATATGTT
CTACGGCGATAACAGACGACCACTGCAGTGGTTTTGTGGGATTTACAGTT
ACACGGTAATATGTCATATGCCAGCTCAACGCCTCGTGACACCCGACCGT
TCGATTTCGCCTCGAAACAGAATCGATTACAGCTGTCCAAGGGAGAGAAC
GACACCGTGTGGTATAAGCTCGTGCAGGAGGAGAAGGCGAAAAAGCTCGT
GGGGCTCACGTAAGTCGAGCAGAGCCACGGGTGTATTGTATAGCTTGTGT
GTGAGGTGCACGCCACACCCCGCGCTAGCAGTAAGATTGCATCGTGAAGA
CTACGATACACAAGGATACAGATTATTTGTCGTCAACGAGAAGTAGCTTT
TGGACGATTCAATGTGACTTGAGATCGACCCACCACACAGCAGTCAGCAA
TCGAGAAATTGGGTACAGCTCGCTCCTCGACTGTGCATGTTACACGGAGG
TTTTTGCCGAGGCGGGTTTGGATGGCAAGGCTCCCCCTGGGCGCAATTAT
CTGTACCTTTTCCGCAATCGATTGCGTTGCCCGGGACCCGTTCGTCTGCC
CGTTTTTGTCTTCCGTTTGTTTGTAGCCTCGCTGAACGACTTTGGTCCTC
TTCTCACGTACGCGGCGTTTCACACGCAGGCCGGAACAGATGATGATTTA
CCAGGTCATCGAGAAGGCGGGGAACCAGGGCATCTGGACGCGCGACATCA
AGACAAGCACCAGCGTGAACCAGGTAATGGTAATGGTGCTATGCTTGCTG
CGGGAATGGGGGGAGGGACACTACAAACCCCAGTCGACCGAAGGAAAGGG
TCTACTTTCGATTCGTCAAACGGTCTGCGCTTTCGTTGTGCCGTCTAGTC
TCGCTGGCCCACCTCCTGCTCCGCATGTGATGTTTCTTGTCTGTCCTCTA
TCCGTCCCTCGTGGCGTGCCTTATCCCCCTTACCTTACTGCGTGACCTTG
ACGTGTTCAGAACACCCTGACCAAGAGCCTGAAATCCCTCGAGAATCGAC
ACCTCATCAAGACCGTCAAGTCCGTTACCAGCAAGAGCAAGAAATTGTAC
ATGCTCTACGAGCTGAGTTGAGTTTCGGCGAGAGGTCCGGCCAAGCGATT
CATCATCGTATTGTTTCGAGCCCGCAGAAGGCGCACTGCTCCGTCGACGA
GTTCAAGAGCGTGAAATTTCGCGTCGCGTTCCCCCTCCCTTAGCGCAGAA
AAGAGAGTAGAGGTGCTCATAGGCGAAAAAAATAAGAGAGGGAGACGTAT
CCATGAACGCGTCCTGCACGCCGCACGGAACCAGGACGCTGACTGCCGTC
CATCCATCCGTCCGCCCTTTCGACAGCCCCACCCAAGGCGATCACCGGCG
GCCCATGGTACACGGATCAAGAGTTCGACTACGACTTTGTGAAACACCTG
TCAAACTACGTGCTCAGCTACGTCAAGGAGCAGGTATTCCCCGTACCTTG
TGCGGGCGAGTGCGTCGCCTGGACTGTGAGGAATGAAGACCGCATATATA
TATATTTGCCGACCAAGGTGCTTGTAATCTGAGCCACGGTTGGACTTTCG
GCCGTGTTTATCACTATAATAGTAATAGTCAAATGATTTCGACATCGATC
TCTCTCCCTGCCTGCTGTTAATAGGCGTACAAGAGAAAAAACGTCCTCTT
TTCTCGTGTCTTGCTCAGCGTGCGGTTTGCTTCCTCCTCCTGTTCCCTGC
CTCGCCGCCCTCCTCTCCATGGACTGTAACTACGTTTTGACTCCCTGTTT
CTCAGTCTTCTTACTATTACCTGGGTGGGCTTTTCTCTATTTCTCGGCCG
TTTTGCCCACTTTCCGCGTTCTTGGGGATTCGCCCCCCTTTCCCCGCGCT
CCAGCAAACGCCTGCTCTGAAGGACATAGCTGCAGCTATCAAGGTATCGG
GCATCTCGAAGATTGACCTTTCCATGGAAGAGGTAAAGCTCATCGTCAAC
ACGCTTGTCTACGACGGCGAGCTCGAGGAGGTTCGAGGGGCGAGGTTCAG
CAGAGGCGTGAGTAAAAACGTTGTCGAGAAAGAGTAAGAAGAAAAAGAAA
TGGAGGACACACCGATTAACCAGAAACCTTAAATTTTACCACCTCACGAG
GGAGGATAGGTTAGTTTCGGCCACTCTCCCAGTGGTGCCGCGCGTTGTAC
AAGAGTGCACGGAACCTCGCTTAACTTTGTCTCGTCCATATCTTCGAGGC
ACCGATTTTAATCACTGTCCCACCCCGCCACACTATATATATAACATCTC
CCTTTCCCATTCACGACGCCGGCATGCCCTACGGCCAGGCTGGCGACGGC
CCTGTGTACAAGATGGCGCCTTCCGTGGAGGTGGTGAACGCCTTCACGGA
AATACCATGCGGAACTTGCAAGGTGACCGCAAAACGACGATCTATTAATA
GCGGGCGAGCGTTTTTGTGGCGGTACATCATGTGCCGTGTCCGCGTTTGC
GGTGTCGCGCCCGCCTCTATATCACCTATGCCACGGCGGAGCATCTCGCA
AACCGCACTTCGTGTACACATTGCACACATACACGATACACATAAAGCAC
ACACATATGAAAATAAATGAATGCACGTAACCGTCTAGTCTTCATTGCAA
TACTCTTTTAATGCTTTTTTTGAACGCAGGTGATGAAACATTGCTCGGAG
GGTGGAGTCGTGTCGCCCAGGACGTGCGTTTACCTTGCTGAATGGTTAAA
CATGCCAAATTCGGACGAGCTGTTCTGACAGGCGCTTGCCCTCTGTCCAT
CCAAGGATCGGAGAAACGAGATTATGTCCCCCCCTCCCCACGCCGCTTAA
GAGCGAAATAATCATCACGTATGTTTTCGCGTACCCTGTGTGTCCGGATT
TGTGTCTGGGTGAAAACGGCAAACGCAATTCCGTTTTTTTCATTCGATGG
CGAAGCCAGGTCCTCATTCTAGTAGTGTAGTGTGCGCTTGTTGGCCTGCC
GAGATGCTTTGCTTTTTTTAGGTACCGGGTATGCTGATCACCGCGAGCTC
ACAGGAAGGAGTGGCACGTGTTGAGAGTTGTTAGTTCCGTGGGGTGGCAT
GTGTGTCAGATGGGAGGGAGGAGTGGGTACTTGATGAGGGTCAGCACGGG
GCAGTTCGTGACTTGGCCCGCGCGTTAAGCAAGGCAATAAAAATGATGAT
ATATAACCCACTCATCTTTCGGCGCAACGTCCGTAAAAATATATAGAAAT
TCCTTATTTTGAGAAACAATCGGTGAAATATTCCCTCTCTCGTGCTCGCA
ACACATAACACCCCTCATTCCTTCAGCATCTCTACAGTATGCGTCTGCGC
TTTGTAGGCTGGTACTAACATTTCTACCGAACTGCACCATGTTCCGTACA
TCAAAATCTATTGTAATAGGTACTACGTACCAGTACACTCTCTTTTGTAG
CTGCCGATTATACTCCCATGGACGTGGGAGAAGACGTAAGAGGATGACTG
CGTTTGATGTAAAGAGCATGATGCTACTTGCGTCGTGTCCCTTCGCTTCT
CTTTCCCACGCGGCGTGCGTTTTTTTGCGGTCATAATATCCCCCTCGTCG
TTACTTGCCCAAATGTGTGGCACTCGTTTGAAACCCTCTTGGCACCTTGG
CGCCGTTAGTCTTGGATCAATCTTGTGGGAAGCCCGTGCCGGTGCAGATA
TCGCAACAAGGTTCCGCGTGCGCTAGAAAAAAATCCCCGACAATATACTG
CAAATAATGTACTCAATAGTAGGCACGAACCTTTTACAAGACCCCAAACG
TGCTACACGAGCGAGACACAAGATGAGCAGGCGAACAAACATCCAACGTG
ATGGGAATCCTTTCGAATACTTCCTATGATAGTACTTGTATCTTTTCGTT
CCAAAAAATGTGGCCCGCGATCCTAAGCTGAACCCAAGGAATGCAATTGC
CTCGGCGGGATTGTCGCCTTTGAAGGCGATGTATCGGGTGCGCGATGCAC
AGTATTTTGACGCCGATTCCATATGCTTTCCTTTAAGACTTACAGCTGAA
GACCTTGCTAGATCTAGACCCAAAATTCAGAATTCCTTCCGCCGAAACAG
CCCAAAAACTAAAGATAATAAAAAATAATTGGTGCACATTAGCTCTAACC
CGCACGCGCAACCGAATC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig130:212904..228571+ >mRNA_F-serratus_M_contig130.2237.1 ID=mRNA_F-serratus_M_contig130.2237.1|Name=mRNA_F-serratus_M_contig130.2237.1|organism=Fucus serratus male|type=CDS|length=1788bp|location=Sequence derived from alignment at F-serratus_M_contig130:212904..228571+ (Fucus serratus male) ATGACTCTGACTCCTGATAAATTTGCTGACCTCCACGGGCGCCTGATGAC TATCCTCTCAGCTGATACCAGCATGACTCTGACTCCTGATAAATTTGCTG ACCTCCACGGGCGCCTGATGACTATCCTCTCAGCTGATACCAGCGATGTT GGAGTCAACAGCGAGGCGCTGTCGGAGAGTTTCGGGGAGCAGTACCCCCT CCTGGTGGACGTGATCAACTCTCTCCTCATGGACGATGTTGGAGTCAACA GCGAGGCGCTGTCGGAGAGTTTCGGGGAGCAGTACCCCCTCCTGGTGGAC GTGATCAACTCTCTCCTCATGGACAATCGATTACAGCTGTCCAAGGGAGA GAACGACACCGTGTGGTATAAGCTCGTGCAGGAGGAGAAGGCGAAAAAGC TCGTGGGGCTCACAATCGATTACAGCTGTCCAAGGGAGAGAACGACACCG TGTGGTATAAGCTCGTGCAGGAGGAGAAGGCGAAAAAGCTCGTGGGGCTC ACGCCGGAACAGATGATGATTTACCAGGTCATCGAGAAGGCGGGGAACCA GGGCATCTGGACGCGCGACATCAAGACAAGCACCAGCGTGAACCAGGCCG GAACAGATGATGATTTACCAGGTCATCGAGAAGGCGGGGAACCAGGGCAT CTGGACGCGCGACATCAAGACAAGCACCAGCGTGAACCAGAACACCCTGA CCAAGAGCCTGAAATCCCTCGAGAATCGACACCTCATCAAGACCGTCAAG TCCGTTACCAGCAAGAGCAAGAAATTGTACATGCTCTACGAGCTGAAACA CCCTGACCAAGAGCCTGAAATCCCTCGAGAATCGACACCTCATCAAGACC GTCAAGTCCGTTACCAGCAAGAGCAAGAAATTGTACATGCTCTACGAGCT GACCCCACCCAAGGCGATCACCGGCGGCCCATGGTACACGGATCAAGAGT TCGACTACGACTTTGTGAAACACCTGTCAAACTACGTGCTCAGCTACGTC AAGGAGCAGCCCCACCCAAGGCGATCACCGGCGGCCCATGGTACACGGAT CAAGAGTTCGACTACGACTTTGTGAAACACCTGTCAAACTACGTGCTCAG CTACGTCAAGGAGCAGCAAACGCCTGCTCTGAAGGACATAGCTGCAGCTA TCAAGGTATCGGGCATCTCGAAGATTGACCTTTCCATGGAAGAGGTAAAG CTCATCGTCAACACGCTTGTCTACGACGGCGAGCTCGAGGAGGTTCGAGG GGCGAGGTTCAGCAGAGGCCAAACGCCTGCTCTGAAGGACATAGCTGCAG CTATCAAGGTATCGGGCATCTCGAAGATTGACCTTTCCATGGAAGAGGTA AAGCTCATCGTCAACACGCTTGTCTACGACGGCGAGCTCGAGGAGGTTCG AGGGGCGAGGTTCAGCAGAGGCGCTGGCGACGGCCCTGTGTACAAGATGG CGCCTTCCGTGGAGGTGGTGAACGCCTTCACGGAAATACCATGCGGAACT TGCAAGGCTGGCGACGGCCCTGTGTACAAGATGGCGCCTTCCGTGGAGGT GGTGAACGCCTTCACGGAAATACCATGCGGAACTTGCAAGGTGATGAAAC ATTGCTCGGAGGGTGGAGTCGTGTCGCCCAGGACGTGCGTTTACCTTGCT GAATGGTTAAACATGCCAAATTCGGACGAGCTGTTCTGAGTGATGAAACA TTGCTCGGAGGGTGGAGTCGTGTCGCCCAGGACGTGCGTTTACCTTGCTG AATGGTTAAACATGCCAAATTCGGACGAGCTGTTCTGA back to top
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