mRNA_F-serratus_M_contig130.2224.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126WZN1_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZN1_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 2.680e-141 Identity = 216/242 (89.26%), Postives = 230/242 (95.04%), Query Frame = 1
Query: 34 DDKERVVRRSAGGMAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEE 759
DD E+ +RS GG RPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR+NL A+EAKELL QT+TS+LI+S+PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDGVMFWNQFFIAALRDSEG VINYVGVQC+VDEDFVRA+QK+EG+E
Sbjct: 33 DDGEKGGKRSGGGXX---RPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLSAEEAKELLEQTETSNLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGVMFWNQFFIAALRDSEGAVINYVGVQCKVDEDFVRASQKKEGDE 271
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126X2D9_9PHAE (Putative LOV domain-containing protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A126X2D9_9PHAE) HSP 1 Score: 405 bits (1042), Expect = 3.560e-140 Identity = 211/232 (90.95%), Postives = 222/232 (95.69%), Query Frame = 1
Query: 70 GMAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEEGD 765
G GKRPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVT+LQEENEKLRGAIR NLGA+EAKELL+QT++SSLI+S PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAALRDSEG VINYVGVQC+VDEDFVRA Q+ EGEE +
Sbjct: 22 GSGTGKRPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRANLGAEEAKELLAQTESSSLIASKPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGAVINYVGVQCKVDEDFVRAVQRTEGEEAE 253
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126X307_SARHM (Putative LOV domain-containing protein n=1 Tax=Sargassum hemiphyllum TaxID=127544 RepID=A0A126X307_SARHM) HSP 1 Score: 411 bits (1057), Expect = 7.480e-140 Identity = 215/228 (94.30%), Postives = 223/228 (97.81%), Query Frame = 1
Query: 67 GGMAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKRE 750
G GGKRPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR+NLG +EAKELL+QT+TSSLISSSPG+ATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAALRDSEGTVINYVGVQC+VDEDFVRAAQKRE
Sbjct: 192 GRRGGGKRPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLGPEEAKELLTQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGTVINYVGVQCKVDEDFVRAAQKRE 419
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: D8LT99_ECTSI (Aureochrome 3 n=5 Tax=Phaeophyceae TaxID=2870 RepID=D8LT99_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 1.910e-139 Identity = 216/251 (86.06%), Postives = 231/251 (92.03%), Query Frame = 1
Query: 19 TGLEEDDKERVVRRSAGGMAG---GKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDT-SSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEE 759
+G++ED AGG G GKRPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVT+LQEENEKLRGAIR+NLG +EAKELL++T+T ++LISS PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAALRDSEGTVINYVGVQC+VDEDFVRA Q+ EGEE
Sbjct: 2 SGMDEDXXXXXXXXXAGGKRGSVSGKRPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRSNLGPEEAKELLAETETPTTLISSRPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGTVINYVGVQCKVDEDFVRAVQRTEGEE 252
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126X1C8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum horneri TaxID=74089 RepID=A0A126X1C8_9PHAE) HSP 1 Score: 385 bits (989), Expect = 1.320e-132 Identity = 200/213 (93.90%), Postives = 208/213 (97.65%), Query Frame = 1
Query: 112 MTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKRE 750
MTE+Q+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR NLG +EAKELL+QT+TSSLISSSPG+ATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+D SVCLRNYRVDG MFWNQFFIAALRDSEG VINYVGVQC+VDEDFVRAAQKRE
Sbjct: 1 MTEKQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGPEEAKELLTQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDASVCLRNYRVDGAMFWNQFFIAALRDSEGIVINYVGVQCKVDEDFVRAAQKRE 213
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: X2CR90_SACJA (Aureochrome2 (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=X2CR90_SACJA) HSP 1 Score: 337 bits (863), Expect = 4.220e-114 Identity = 175/184 (95.11%), Postives = 182/184 (98.91%), Query Frame = 1
Query: 112 MTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAAL 663
MTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR NLGADEAKELL+QT++SSLI+S+PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAAL
Sbjct: 1 MTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGADEAKELLAQTESSSLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAAL 184
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A835YVH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH1_9STRA) HSP 1 Score: 327 bits (839), Expect = 1.480e-107 Identity = 170/220 (77.27%), Postives = 197/220 (89.55%), Query Frame = 1
Query: 100 GGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSS---LISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKRE 750
G R+M+EQQKL+RRERNREHAKRSRVRKKFLLESLQKSV+ALQEENE+LRGAIR N +A+ELL++T+ +++++PG+A +VLDDPDYSLV+ALQTAQQNFVITDPTLPDNPIVFASQGFL+LTGYTLDQVLGRNCRFLQGPDTDPKAVE+IRKAIE G DTSVCL NYR DG FWNQFFIA+LRD++G +INYVGVQC+V E+FV A QK+E
Sbjct: 167 GSRSMSEQQKLERRERNREHAKRSRVRKKFLLESLQKSVSALQEENERLRGAIREN--CTDAQELLTRTEAGGGGGVLAATPGEANRVLDDPDYSLVRALQTAQQNFVITDPTLPDNPIVFASQGFLDLTGYTLDQVLGRNCRFLQGPDTDPKAVERIRKAIESGCDTSVCLLNYRSDGTQFWNQFFIASLRDADGKIINYVGVQCKVSEEFVTAVQKQE 384
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A7S2GCF2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCF2_9STRA) HSP 1 Score: 320 bits (819), Expect = 8.540e-107 Identity = 166/220 (75.45%), Postives = 187/220 (85.00%), Query Frame = 1
Query: 106 RNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSS--LISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEE 759
RNMTE+QK++RRERNREHAKRSRVRKKFLLESLQ+SV ALQ+ENEKLR AI+ +L +A LLSQ T + LI+S P DAT++LDDPDYSLVKALQTAQQNFVITDP+LPDNPIVFASQGFL LTGY LDQVLGRNCRFLQGP TDPKAVEKIR A+ G+D SVCL NYR+DG FWNQFF+A LRDS+G V+NYVGVQC+V EDF RA + EG E
Sbjct: 14 RNMTEKQKVERRERNREHAKRSRVRKKFLLESLQQSVNALQQENEKLRSAIKEHLNPQQADSLLSQCSTKAGPLIASDPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASQGFLSLTGYQLDQVLGRNCRFLQGPQTDPKAVEKIRNAVADGIDASVCLLNYRIDGSTFWNQFFVAPLRDSDGQVVNYVGVQCKVSEDFARAIAQSEGAE 233
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A7S1CUW3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUW3_CYCTE) HSP 1 Score: 310 bits (795), Expect = 4.120e-101 Identity = 162/225 (72.00%), Postives = 192/225 (85.33%), Query Frame = 1
Query: 106 RNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELL----SQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFV-RAAQKREGEEGD 765
R M+EQQK++RRERNREHAKRSR+RKKFLLESLQ+SVT L+EENEKLR +IR++LGA EA ELL S+ + LI++SP DA KVLDDPD+S +KALQTAQQNFV+TDP+LPDNPIV+A+QGFL LTGYTLDQVLGRNCRFLQGP+TDPKAVEKIRK+IE+G D SVCL NYRVDG FWNQFFIAALRD+ G + NYVGVQC+V + + +K+E EEG+
Sbjct: 157 RKMSEQQKVERRERNREHAKRSRIRKKFLLESLQQSVTLLKEENEKLRQSIRSHLGAAEADELLGKSLSKAGEAGLIANSPVDANKVLDDPDFSFIKALQTAQQNFVVTDPSLPDNPIVYATQGFLNLTGYTLDQVLGRNCRFLQGPETDPKAVEKIRKSIEEGTDMSVCLLNYRVDGTTFWNQFFIAALRDASGNITNYVGVQCKVSDQYAANVCKKQEAEEGE 381
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A7S1UCA1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCA1_9STRA) HSP 1 Score: 303 bits (777), Expect = 4.830e-99 Identity = 161/226 (71.24%), Postives = 188/226 (83.19%), Query Frame = 1
Query: 100 GGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDT-SSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEEGDADG 774
GGRNMTE+QKL+RRERNREHAKRSRVRKKFLLESLQKSV ALQ EN +LR AIR + DEA+++L T+ SL+++S +AT++LDDPDYSLVKALQTAQQNFVITDP LPDNPIVFAS GFL LTGYTLDQVLGRNCRFLQGPDTDPKAV KIR+AI G D SVCL NYR+DG FWNQFF+AALRD G + NYVGVQC+V +D+ + ++ + ++ ADG
Sbjct: 106 GGRNMTEEQKLERRERNREHAKRSRVRKKFLLESLQKSVDALQAENLRLRAAIREQI-PDEAEDVLRATELRDSLLANSAAEATQILDDPDYSLVKALQTAQQNFVITDPNLPDNPIVFASAGFLTLTGYTLDQVLGRNCRFLQGPDTDPKAVAKIREAIADGHDCSVCLLNYRIDGSTFWNQFFVAALRDGRGEIANYVGVQCQVSDDYAKIVRQEDSKKDGADG 330 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2224.1 >prot_F-serratus_M_contig130.2224.1 ID=prot_F-serratus_M_contig130.2224.1|Name=mRNA_F-serratus_M_contig130.2224.1|organism=Fucus serratus male|type=polypeptide|length=260bp MAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTAback to top mRNA from alignment at F-serratus_M_contig130:63348..67230- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig130.2224.1 ID=mRNA_F-serratus_M_contig130.2224.1|Name=mRNA_F-serratus_M_contig130.2224.1|organism=Fucus serratus male|type=mRNA|length=3883bp|location=Sequence derived from alignment at F-serratus_M_contig130:63348..67230- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig130:63348..67230- >mRNA_F-serratus_M_contig130.2224.1 ID=mRNA_F-serratus_M_contig130.2224.1|Name=mRNA_F-serratus_M_contig130.2224.1|organism=Fucus serratus male|type=CDS|length=1560bp|location=Sequence derived from alignment at F-serratus_M_contig130:63348..67230- (Fucus serratus male)back to top |