mRNA_F-serratus_M_contig13.2205.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig13.2205.1 vs. uniprot
Match: D7FYW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW7_ECTSI) HSP 1 Score: 275 bits (703), Expect = 2.440e-84 Identity = 211/350 (60.29%), Postives = 267/350 (76.29%), Query Frame = 2
Query: 182 VQPVRVAISEHEVQRVEVCGRGMR-TDWDVTSSAYEANHLQERCVDLATELFAVKGKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTRTVNVLEGEKSKLTDQNADLRVDRDRLLSVLRRHTEAGRSESIAAHRERLRRRPMTEKEVNRCDLAATKLELKTLRRENQRLLADARRQSARVRGLEDGTTMLAKKLAEVEEELEASSQEKASLRRESDAAKAAERRAVFDLDRETALRLEAVEKASAAENQAEEXXXXXXXXXXXXXSFRTQVMVAMEQLSAKDSARARHQGSVARYQTMLDAQALALQYARQELLSEKVKRQESERQARLRHIAAIDSKTR 1228
+P+ V S+ E+Q + R +R D D S EA HLQERCVD+ATELF +K +FD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R V LE E SKL NADLR+DR+RLL V+RR+ +AGR ES+AAHR+RLR+R M+EKEVNRCDLA+ KL LK + +EN+RLL+ A+ Q++R+R LE+GT +LAKKL+E+E ELE + +K ++++ESD A A E+RA D++ E LRL+AVE+AS+A XXXXXXXX + R ++ +++L AKDSARARHQGSV RYQ M+D+QA+ALQ AR++LL EKV+RQESERQARLRHIAAIDSK+R
Sbjct: 25 AEPIPVQASKIELQPTIMVDRDLRRADLDAAPSVTEAAHLQERCVDMATELFELKTRFDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKSFMRRVKTLEEENSKLAADNADLRLDRERLLGVVRRYKDAGRKESVAAHRDRLRKRHMSEKEVNRCDLASAKLGLKAMGQENKRLLSKAKGQASRIRELENGTEVLAKKLSELEHELECAINQKDAVQQESDKALAQEQRAKSDMEHEALLRLQAVEQASSASRXXXXXXXXXXXXEAVIETLRVKLESTVKKLEAKDSARARHQGSVVRYQKMIDSQAMALQAAREQLLGEKVRRQESERQARLRHIAAIDSKSR 374 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig13.2205.1 >prot_F-serratus_M_contig13.2205.1 ID=prot_F-serratus_M_contig13.2205.1|Name=mRNA_F-serratus_M_contig13.2205.1|organism=Fucus serratus male|type=polypeptide|length=411bp MSVSFELSGLDLSSGGSRDCGDRDNRNRRVQPVRVAISEHEVQRVEVCGRback to top mRNA from alignment at F-serratus_M_contig13:677863..710790+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig13.2205.1 ID=mRNA_F-serratus_M_contig13.2205.1|Name=mRNA_F-serratus_M_contig13.2205.1|organism=Fucus serratus male|type=mRNA|length=32928bp|location=Sequence derived from alignment at F-serratus_M_contig13:677863..710790+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig13:677863..710790+ >mRNA_F-serratus_M_contig13.2205.1 ID=mRNA_F-serratus_M_contig13.2205.1|Name=mRNA_F-serratus_M_contig13.2205.1|organism=Fucus serratus male|type=CDS|length=2466bp|location=Sequence derived from alignment at F-serratus_M_contig13:677863..710790+ (Fucus serratus male)back to top |