mRNA_F-serratus_M_contig13.2201.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig13.2201.1 vs. uniprot
Match: D7FYW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW1_ECTSI) HSP 1 Score: 265 bits (676), Expect = 4.830e-72 Identity = 253/790 (32.03%), Postives = 365/790 (46.20%), Query Frame = 3
Query: 1116 MTAIADATDAARKETQSALKAVEGFVALNRKLMDELRCTIDTREDLLQQLGREQWARQQLEGKVKELLAGALAAE--LKEKDDEARCEQARAEAKRLAASRSRIQEDYRMVLINAARDRARFEDALSTLETQLRNERAVNTIRAKEETERANMGFEEIACIRAGLAPRSRSRAR-RHGLGRRPKT-------GGNAVHDVGG-VYCNCERIEAHQFALTRMTISATSRREQQHAPPMNRYGKSDHNGREATGIGEDIERNHGADIDGSVVFKRVHDREGREAIRKTPAYPESSVGVLASSGKQCEGSVERAVQVAAVEHVRAFLDGFVVSM----EGSSFVKSASDTAKNWG--------EDRGAKRRSDASRWAVIGKSRGLSVKTAPV---KGNTSASS-------SAISGLARVLSSSWLALLNRVSASFSSSVRRASDGQGGGD---------------PICVDTTVPIRLIRRTVQTCGLVCSIGGGPALTQLDMKLKR--LANGMSHLGHREYFELIFSLAKVRFADEPKDDVLDKLSRVLRPATGGVDFGPHAGVHKATESPNKVTAGTRSADRRVKYRAATTSIAETGAEEGLAG-VEQVLNKNRRALKMIFLHYSAGFFSAADASGGREQNLMPFAALLSFCKDFELIPGLFSRESIHDIYVQLVYPLDTLLTPKMLAAREGLQGWSGGEFASSRIIGSDGGDGSGSMDAMASKFGLSMREWMAWLGLAAVGCAWFDKQRELYNSSTKKMLGLLQWMEASKGKARVSSRRGVAAVVPAFKL 3332
M IADAT+ AR+E QSAL VE F ALNRKL+DELR T+ R++LL L E+ R+QLE ++ELL L AE L+E+D +A+C++ + E+ R+A +R++E+YR+ L ++ R+RAR ++ +S+LE L ++R + I A+E +ERA MG EE+ +RAG R R R RH + RP G DV G ++ +R++A + R + +++ P G N G D + A + + KR + SS+G +AV AAVE+V FL FV + + +S + SAS A G E G+ S+WA IG+ +S + A V + N +A + S I+ AR LS+SW +LL +++ ++ G GGG P D TVP +RR VQ+CG++ + GGGP L DM+L+R + G +GHREYF++I +L++ RF + KD L++LSR+LRP +SP T G + G+ V +L+ +SA F RE+ PG S + AAR Q GG A++ GL + +WMAWLGL AVGC+WFDKQR LYN+ TKK+LGLLQWME S GK R+S++RG A VPAF L
Sbjct: 1 MAVIADATEKAREEAQSALDTVEAFAALNRKLVDELRTTVCARDELLGDLRNERGIREQLEHDIEELLGSGLVAEFKLREEDLKAQCKREQGESARVAKVHARMEEEYRIALDSSGRERARLQETVSSLEETLLSDRREHAISAREFSERATMGSEEMRSLRAGFLTRPRQRGYDRHTV--RPSAAKLSGQGGSGGQGDVSGWLFDVQQRMDAQKVGAGRGVVRHPTKK----TAPDGGRGVGHQN------TGSDGNLSSAAVVPPTGGAKRQFTQPTSCGGXXXXXXDGSSIGXXXXXXXXXNAG--QAVHAAAVENVELFLGDFVPEVRAQPQAASALLSASANASGSGAEGKVGGEEHDGSAVVKKGSKWAAIGRGGKISARAAAVCLEEANKAAQAETLHRLRSMINAAARTLSASWFSLLATATSAAATHGGHVGHGTGGGRGEGTAVENINSAADRPASTDATVPAIAVRRLVQSCGILRNAGGGPTLAHADMELQRNTASRGGRSVGHREYFKIIMALSQYRFVGDAKDHALEQLSRMLRPVQ--------------RDSPR-------------------TPPHAQGRQAGVGSDVPALLDL-----------WSAALFGLGSVLQAREEP-----------------PGRRSAAA------------------PATAARN--QFGEGGVVAAA---------------------GLGLDQWMAWLGLVAVGCSWFDKQRGLYNTPTKKVLGLLQWMEGSVGKKRISAKRG-GAFVPAFNL 673 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig13.2201.1 >prot_F-serratus_M_contig13.2201.1 ID=prot_F-serratus_M_contig13.2201.1|Name=mRNA_F-serratus_M_contig13.2201.1|organism=Fucus serratus male|type=polypeptide|length=1039bp MASLDKLASMEGWDFGEDDADDVGFDEVIATPRAPQSTSESRGSSNTESTback to top mRNA from alignment at F-serratus_M_contig13:611282..619186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig13.2201.1 ID=mRNA_F-serratus_M_contig13.2201.1|Name=mRNA_F-serratus_M_contig13.2201.1|organism=Fucus serratus male|type=mRNA|length=7905bp|location=Sequence derived from alignment at F-serratus_M_contig13:611282..619186+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig13:611282..619186+ >mRNA_F-serratus_M_contig13.2201.1 ID=mRNA_F-serratus_M_contig13.2201.1|Name=mRNA_F-serratus_M_contig13.2201.1|organism=Fucus serratus male|type=CDS|length=6234bp|location=Sequence derived from alignment at F-serratus_M_contig13:611282..619186+ (Fucus serratus male)back to top |