mRNA_F-serratus_M_contig13.2188.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig13.2188.1
Unique NamemRNA_F-serratus_M_contig13.2188.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: D7FZG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG5_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 5.360e-76
Identity = 134/212 (63.21%), Postives = 157/212 (74.06%), Query Frame = 1 
Query:  577 LERLGIQIHDGENSQDFHEQLTRAWGTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVLPEVRIPAEMDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLAAVWG 1212
            LE LGI I D E++++  EQL R WGT +V+N+Q EYE+D A LQ+ +R  MEVLGCQAWDV  VLTTD+EV RLN QYRG+  STDILSFP  DMS  PGVLP+VR PAEMDLGDMF+SLAYVDRQ+ RD+EE                    DS RGVSGAMS+ FD+Q+RASMLL+HGLIHLLGYDHET  D++AMV  EE VL AV+G
Sbjct:   79 LESLGISIMDDEDAEEVQEQLRREWGTASVQNEQKEYEIDTAELQSKMRQTMEVLGCQAWDVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFISLAYVDRQIKRDREEXXXXXXXXXXXXXXXXXXXXDSERGVSGAMSRVFDVQERASMLLVHGLIHLLGYDHETESDYKAMVAVEEEVLRAVFG 290
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A835Z8A0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.530e-43
Identity = 96/202 (47.52%), Postives = 124/202 (61.39%), Query Frame = 1 
Query:  652 GTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMS-----------------DEPGVLPEVRIPAEMDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLAAV 1206
            GTV V N Q  Y++D   L+  +R A ++LG   WDV++ LTTD+ V++LNSQYRG D STDILSF   ++                  + PG L +VR P EMDLG+M VSLAYVDR + +DK E +G  Q EE              RGVSGAMS+ F +Q+R  +L IHGL+HL+GYDHET ED+E MV  EE +L A+
Sbjct:   35 GTVYVRNTQRSYKIDTQQLEQHIRAARDLLGYSNWDVSLWLTTDKTVRKLNSQYRGKDKSTDILSFSYNELQCSYRLLHGGSHSTKLQVETPGKLAKVRHPEEMDLGEMMVSLAYVDRVIQQDKAEQDGQSQEEEHD------------RGVSGAMSRVFTVQERLPLLCIHGLLHLVGYDHETDEDYEVMVAREEELLRAL 224
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A1Z5JES7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JES7_FISSO)

HSP 1 Score: 126 bits (317), Expect = 4.090e-29
Identity = 76/173 (43.93%), Postives = 102/173 (58.96%), Query Frame = 1 
Query:  688 EVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVL--PEVRIPAEMDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLA 1200
            E+D A L  TL      +G + + V++ L  DEE+Q +N + RGVDA TDILSFP ++   EPG L  P+  IP    LGD+ V + YV R+   DKE  E L        +          RGVSGAM++ +D ++R  MLLIHG++HL+GYDHE  ED+E MV  EE +LA
Sbjct:   64 EIDEARLLETLNRIRRHIGYETYGVSLELIGDEEMQEINLESRGVDAPTDILSFPFSEYI-EPGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQL--------DXXXXXXXXXERGVSGAMARIYDAEERIHMLLIHGMLHLVGYDHEDDEDYELMVAKEEEILA 227
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A1Z5K9I9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9I9_FISSO)

HSP 1 Score: 126 bits (316), Expect = 5.280e-29
Identity = 75/176 (42.61%), Postives = 104/176 (59.09%), Query Frame = 1 
Query:  679 DEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVL--PEVRIPAEMDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLA 1200
            D  ++D A L  TL      +G + + V++ L  DEE+Q +N + RGVDA +DILSFP +D   EPG L  P+  IP    LGD+ V + YV R+   DKE  E L        +E         RGVSGAM++ +D ++R  MLL+HG++HL+GYDHE  +D+E MV  EE +LA
Sbjct:   59 DVLQIDEARLLETLSRIRRHIGYETYGVSLELIGDEEMQAVNLESRGVDAPSDILSFPFSDYI-EPGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQL--------DESXXXXXXXERGVSGAMARIYDAEERIHMLLVHGMLHLVGYDHEDDDDYELMVAKEEEILA 225
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A4D9DAX9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.860e-27
Identity = 74/186 (39.78%), Postives = 108/186 (58.06%), Query Frame = 1 
Query:  652 GTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVLPEVR--IPAEM-DLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLA 1200
            GT+ + N Q    +D   L   +R  +E++G    DV++ LT D  ++  N +YRG   +TDILSFP  +  + PGV       +  E+ DLGDM VS+ YV RQ  RD+  V+  ++GE           W   RG SGAM++ F +QDR   L+IHG++HLLG+DHET +++  MV+ E+ VLA
Sbjct:   75 GTIQIRNSQRTIALDLDLLNTQVRAILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEY-EAPGVPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQ--VDWFEKGEN---------LWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKEYNEMVKEEDRVLA 248
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: W7UC15_9STRA (Rrna maturation factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC15_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.000e-27
Identity = 75/186 (40.32%), Postives = 109/186 (58.60%), Query Frame = 1 
Query:  652 GTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVLPEVR--IPAEM-DLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLA 1200
            GT+ + N Q    +D   L A +R  +E++G    DV++ LT D  ++  N +YRG   +TDILSFP  +  + PG+       +  E+ DLGDM VS+ YV RQ  RD+   + L++GE           W   RG SGAM++ F +QDR   L+IHG++HLLG+DHET +D+  MV+ E+ VLA
Sbjct:  211 GTIQIRNSQRTIALDLDLLHAQVRTILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEY-EAPGIPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQ--ADWLEKGEN---------LWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKDYNEMVKEEDRVLA 384
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A0G4EXT6_VITBC (ACPS domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EXT6_VITBC)

HSP 1 Score: 125 bits (315), Expect = 7.810e-27
Identity = 69/182 (37.91%), Postives = 105/182 (57.69%), Query Frame = 1 
Query:  652 GTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVLPEVRIPAEMDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVL 1197
            G + + N Q E  +D   L+  ++   +++G  A+D+ V L  ++ +Q LN  +R  D  TDILSF   D   EPG LP+V    ++DLGD+F+S  YV  +   D+ E+E           ED  E+  + RGVSGAM+K F +++R  +L+IHG++HLLGYD ++  D   MV  EE V+
Sbjct:  145 GEITLTNSQREIALDMGLLERQIKHIRDIIGVSAFDIGVELVDNQRMQHLNRDFRAKDRPTDILSFRCFD-DIEPGSLPKVTSAEDLDLGDIFISAEYVQERCDEDRAEMEAQL--------EDNGEFVSTERGVSGAMAKTFTVRERLPLLVIHGILHLLGYDDQSDSDWSMMVNREEQVI 317
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A448ZRN4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRN4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.250e-26
Identity = 77/192 (40.10%), Postives = 114/192 (59.38%), Query Frame = 1 
Query:  652 GTVNVENQQDEY-EVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSD-EPGVL--PEVRIPAEMDLGDMFVSLAYVDRQMARD----KEEVEGLKQGEEP--HGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVL 1197
            GTV++ N Q+   E+D  ALQ T+    +++G + +DV ++L  D+E++  N + RG+++ TDILSFP     D + G+L  PE  IP    LGDM V + YV R+   D    KE+ EG    E+   +G++D     D  RGVSGAM+   D + R  MLL+HG++HL+GYDH   +D+  MV  EE +L
Sbjct:  113 GTVSIYNDQEALKEIDEDALQRTVHRISKIIGYETYDVTLLLVDDDEMRETNLETRGINSPTDILSFPFHSREDNKAGLLKEPEFDIPDYYTLGDMVVCVPYVIRRCKEDILFRKEQAEGATNDEKKSEYGDDDSDLIDDDDRGVSGAMANIDDPEKRIRMLLVHGMLHLVGYDHIEDDDYVEMVEREEELL 304
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: A0A7S1ZIF3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIF3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.980e-26
Identity = 66/172 (38.37%), Postives = 103/172 (59.88%), Query Frame = 1 
Query:  691 VDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVA-DMSDEPGVLPEVRIPAE--MDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVL 1197
            +D + LQ  + +  +++G + +DV+++LT DE +  +N+  RG++  TDILSFP   ++  EPGVL +     E   +LG+M V + Y++R++  D+E  E                     RGVSGAM+K +D+++R  ML +HG++HL+GYDHET ED E MV  EE VL
Sbjct:  124 IDISTLQHKVSIIRQIIGYETYDVSILLTDDELITEINNDTRGMNKPTDILSFPFDNEVIVEPGVLGDAEFDHEDFYNLGEMIVDVPYIERRIEEDREYYEXXXXXXXXX----------XXRGVSGAMAKVYDVEERIGMLFVHGMLHLVGYDHETDEDFELMVTKEEEVL 285
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BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Match: B7FP01_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP01_PHATC)

HSP 1 Score: 114 bits (285), Expect = 2.360e-25
Identity = 66/184 (35.87%), Postives = 105/184 (57.07%), Query Frame = 1 
Query:  652 GTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVVLTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVL--PEVRIPAEMDLGDMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMSKNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVL 1197
            G + VEN Q+   +D   L+AT+    +++G + +DV+++L  D+E++  N + RG+D  TD+LSFP  +   EPGVL  P V I    ++GDM + + YV R    D +      + E+              RGVS AM+   D ++R +MLL+HG++HL+GYDH   +D++ MV  EE +L
Sbjct:   16 GDIYVENNQESLNIDLERLKATIAKIRDLMGYRTYDVSLLLVDDQEMRETNEETRGMDEPTDVLSFPFTEAI-EPGVLTPPVVDIGDYYNMGDMMIDVPYVIRACQDDAKYSHSDLEDED--------------RGVSAAMAMVMDPEERINMLLVHGMLHLVGYDHIDDDDYQLMVAKEEEIL 184
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZG5_ECTSI5.360e-7663.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8A0_9STRA8.530e-4347.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5JES7_FISSO4.090e-2943.93Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5K9I9_FISSO5.280e-2942.61Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A4D9DAX9_9STRA1.860e-2739.78Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UC15_9STRA2.000e-2740.32Rrna maturation factor n=1 Tax=Nannochloropsis gad... [more]
A0A0G4EXT6_VITBC7.810e-2737.91ACPS domain-containing protein n=1 Tax=Vitrella br... [more]
A0A448ZRN4_9STRA1.250e-2640.10Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1ZIF3_9STRA3.980e-2638.37Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7FP01_PHATC2.360e-2535.87Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:409962..414498 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.1
Seed ortholog evalue2.2e-67
Seed eggNOG ortholog2880.D7FZG5
Preferred nameYBEY
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGs2R6QZ@2759,COG0319@1
Ec32 ortholog descriptionEndoribonuclease YbeY
Ec32 orthologEc-19_003220.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2482
Cds size1215
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2188.1prot_F-serratus_M_contig13.2188.1Fucus serratus malepolypeptideF-serratus_M_contig13 409983..413252 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929243.3312604-UTR-F-serratus_M_contig13:409961..4099821622929243.3312604-UTR-F-serratus_M_contig13:409961..409982Fucus serratus maleUTRF-serratus_M_contig13 409962..409982 +
1690962765.9926102-UTR-F-serratus_M_contig13:409961..4099821690962765.9926102-UTR-F-serratus_M_contig13:409961..409982Fucus serratus maleUTRF-serratus_M_contig13 409962..409982 +
1622929243.4617035-UTR-F-serratus_M_contig13:413252..4144981622929243.4617035-UTR-F-serratus_M_contig13:413252..414498Fucus serratus maleUTRF-serratus_M_contig13 413253..414498 +
1690962766.0788672-UTR-F-serratus_M_contig13:413252..4144981690962766.0788672-UTR-F-serratus_M_contig13:413252..414498Fucus serratus maleUTRF-serratus_M_contig13 413253..414498 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929243.3528178-CDS-F-serratus_M_contig13:409982..4105641622929243.3528178-CDS-F-serratus_M_contig13:409982..410564Fucus serratus maleCDSF-serratus_M_contig13 409983..410564 +
1690962766.010983-CDS-F-serratus_M_contig13:409982..4105641690962766.010983-CDS-F-serratus_M_contig13:409982..410564Fucus serratus maleCDSF-serratus_M_contig13 409983..410564 +
1622929243.3796813-CDS-F-serratus_M_contig13:410949..4110631622929243.3796813-CDS-F-serratus_M_contig13:410949..411063Fucus serratus maleCDSF-serratus_M_contig13 410950..411063 +
1690962766.0224578-CDS-F-serratus_M_contig13:410949..4110631690962766.0224578-CDS-F-serratus_M_contig13:410949..411063Fucus serratus maleCDSF-serratus_M_contig13 410950..411063 +
1622929243.395042-CDS-F-serratus_M_contig13:411316..4114091622929243.395042-CDS-F-serratus_M_contig13:411316..411409Fucus serratus maleCDSF-serratus_M_contig13 411317..411409 +
1690962766.0345814-CDS-F-serratus_M_contig13:411316..4114091690962766.0345814-CDS-F-serratus_M_contig13:411316..411409Fucus serratus maleCDSF-serratus_M_contig13 411317..411409 +
1622929243.4120777-CDS-F-serratus_M_contig13:411750..4118311622929243.4120777-CDS-F-serratus_M_contig13:411750..411831Fucus serratus maleCDSF-serratus_M_contig13 411751..411831 +
1690962766.0462208-CDS-F-serratus_M_contig13:411750..4118311690962766.0462208-CDS-F-serratus_M_contig13:411750..411831Fucus serratus maleCDSF-serratus_M_contig13 411751..411831 +
1622929243.4265597-CDS-F-serratus_M_contig13:412269..4124671622929243.4265597-CDS-F-serratus_M_contig13:412269..412467Fucus serratus maleCDSF-serratus_M_contig13 412270..412467 +
1690962766.0560358-CDS-F-serratus_M_contig13:412269..4124671690962766.0560358-CDS-F-serratus_M_contig13:412269..412467Fucus serratus maleCDSF-serratus_M_contig13 412270..412467 +
1622929243.4428294-CDS-F-serratus_M_contig13:413105..4132521622929243.4428294-CDS-F-serratus_M_contig13:413105..413252Fucus serratus maleCDSF-serratus_M_contig13 413106..413252 +
1690962766.066351-CDS-F-serratus_M_contig13:413105..4132521690962766.066351-CDS-F-serratus_M_contig13:413105..413252Fucus serratus maleCDSF-serratus_M_contig13 413106..413252 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig13.2188.1

>prot_F-serratus_M_contig13.2188.1 ID=prot_F-serratus_M_contig13.2188.1|Name=mRNA_F-serratus_M_contig13.2188.1|organism=Fucus serratus male|type=polypeptide|length=405bp
MMLPKCCAFAFGNNFSPCRGSINGGASSAVLAAHASVASLFRLAPTWKGG
RTCSTLFLQCHARRPSIKRSGFWHSAGPTEAVLGGFIVPAERRTCSSKNI
RGRRCVRPTNSRQRHSGLRSSIFSSPTNSETTVDGEEVKQDEGLCSEQDR
LLGALEEEYPLVEDGEKREESHEGEGHWDELDESELERLGIQIHDGENSQ
DFHEQLTRAWGTVNVENQQDEYEVDAAALQATLRMAMEVLGCQAWDVAVV
LTTDEEVQRLNSQYRGVDASTDILSFPVADMSDEPGVLPEVRIPAEMDLG
DMFVSLAYVDRQMARDKEEVEGLKQGEEPHGEEDGAEWWDSRRGVSGAMS
KNFDLQDRASMLLIHGLIHLLGYDHETPEDHEAMVRAEEAVLAAVWGDKE
TRNI*
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mRNA from alignment at F-serratus_M_contig13:409962..414498+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig13.2188.1 ID=mRNA_F-serratus_M_contig13.2188.1|Name=mRNA_F-serratus_M_contig13.2188.1|organism=Fucus serratus male|type=mRNA|length=4537bp|location=Sequence derived from alignment at F-serratus_M_contig13:409962..414498+ (Fucus serratus male)
GAAGCATCGGAGCGGGTTGAAATGATGCTCCCCAAGTGCTGTGCCTTCGC
TTTTGGGAATAATTTTTCCCCTTGTCGTGGAAGTATCAATGGTGGTGCCT
CTTCGGCCGTGCTCGCTGCGCACGCCAGCGTCGCAAGCCTTTTTCGTCTA
GCGCCGACGTGGAAAGGTGGACGTACCTGTAGTACACTTTTTTTGCAATG
TCATGCAAGAAGGCCGTCCATTAAACGCAGCGGCTTCTGGCACAGCGCGG
GGCCGACAGAAGCAGTTCTTGGCGGGTTTATCGTGCCCGCAGAAAGACGG
ACTTGTTCATCAAAAAATATTCGTGGACGACGGTGTGTACGGCCAACAAA
CAGTAGGCAGCGGCATTCAGGCTTGAGGTCGTCCATTTTTAGCTCCCCGA
CAAACTCCGAGACGACCGTGGACGGGGAGGAGGTGAAACAAGATGAAGGG
CTGTGCTCAGAACAGGACCGGCTACTCGGCGCGCTTGAGGAAGAGTACCC
CCTGGTGGAAGACGGCGAAAAAAGAGAAGAGTCCCACGAAGGAGAAGGTC
ATTGGGATGAACTGGATGAGTCCGAGCTCGAGCGCTTGGGAATACAGATA
CATGTAATGGCAAATCCGAAAAAACCCGCACTATAGGTGCAGTCGGTTTG
GTTCACCTCTCGGGGATAATCCCTGCCCCTGCTGCGTTCCGATAGCCCCG
TCCTTACGTTGAGCCTTCTGGTTGACCTCCGGTCGATATTGGTGCCTCAG
GAGTGGCATGTGTTTACTCGCACAACCAGTCGTGAAGAAACGCGTCATTC
CTACTGTTACCGCACTCGATCTTGGCGACACACGCACAAAGTGAAGTACC
AACTCCAGCACACACATACTCTATGTACTATAAAAGGTACAAAACATATA
CCAGGTATTTATTAGTACAGCAGTAGCAAGCAGTCCTGAAGCTCATCGCT
CCCGGCATGCGGAAAATATGATTGCACATGCGTGGCAGGACGGCGAGAAT
AGTCAAGACTTCCACGAGCAGCTGACACGAGCGTGGGGGACGGTGAACGT
GGAGAACCAGCAGGACGAGTACGAGGTCGACGCTGCTGCCCTCCAGGCTA
CGGTAAAGGGCAGCACAGAGCAGGAGTACAGCTGTGGGGGAGTAGGGCAT
CGTTTGAAACGGGCCACTGCAGCGGTATAGATGCAGCTCAGCCTTCCAGG
TTCTTGTCGAGCGCGAGCTCGCCGGGGACCTTTTGGGAGTGACTTATGGT
TTGACTGAGATACTCTCTGCCGCTGTATTTCTGCCCGTTGTTTTTCCCCC
CGACCCCCCTGCTTGTCTCACGGCCCCGCGATGCCACCGACGCTATCGAA
TCTAGCTACGGATGGCAATGGAGGTGCTGGGGTGCCAAGCGTGGGATGTG
GCTGTTGTACTGACGACGGACGAGGAAGTGCAGCGGCTCAACAGTCAGGT
GCGAATCGGCTCTCTCGGCCTTCTCCTGCCGGAAGATCAAATAAGATCAT
CAGCTTTGCGCATTGCGACGCTTGAGAGATGATCATGCCGCAGAAATATT
GCGGCGAGAGACGGAGATGGGGTGTGGGCAGGGGGGGGGGGGAGATCGCC
ATCCCCATGTGTACCTCTTGCCTTTACGCCAAGGCACGTTGCTGTTGAGT
GCCTTCTTTGTTTTTTCTATGCACCGCAGCTGTCACGAACGTCTTAGGCG
ACCGATATATTTCGTACCTTTCGCGATCGAGACCGAATAATCTGTCACCG
CGCTGACTTTCCTCGTTCTAACTGCTGCTCCTCGTGCAGTACCGAGGGGT
CGACGCGTCTACCGACATCCTTTCGTTTCCCGTGGCCGATATGTCTGACG
AACCCGGAGTTCTGCCTGAGGTACGCTTGAAACTTTACCGGGGTGGTTTT
TCGAAGAAAGCTAACAACTGCGAAGGAGGCGTTTAGTGAGGGGAAAGGAA
GGGGGGAGTTGGGGAGCGTAGGGGTTGGCAGGGGCGGAAACGACTCCCTC
CGGAAACCCTTATAGATGTCATGGCTGCAATCGCAACTTCCGCCGCCCTC
CCCCTTGCCTCCTGACTCACCCTTCTTGTCCTTTCGTAACGTACTGATGG
GACACAAACATGGGGAAAACTACTCGTACTGCGCGACGAACCGCCTCCAC
ACGGTCATGATCCTCCTACCTCTTGACCTTACAGCAATCCTGATAGCTCC
CCTGACGACTCGCTCGCACCGAGCCTCGCGGCGTATGAACTCGGCGTGTT
TGCGCTCAAGCCAACCTTAGCCTGACCCACTGTTACTCTCCTTTTAATCT
CCCCACAGGTAAGGATTCCAGCGGAGATGGACCTCGGAGACATGTTTGTG
TCCTTGGCGTACGTTGACCGACAGATGGCGAGGGACAAAGAAGAGGTGGA
GGGTTTGAAACAGGGCGAGGAACCTCATGGCGAAGAGGATGGGGCCGAGT
GGTGGGACAGCCGCAGGGGGGTGAGCGGAGCAATGTCCAAGAACTTCGAC
CTTCAGGTTAACCTTTATTTTTTGCTCCTTTCTAGCAGAGTTTCAGCTTG
TGTTTTTTTTTTGAAGGGTTGAGGGTGATGGGGAGGCAGGGTGGATGCGG
TCGGGATTTTGAGATGTACTCAGCAAGCTCTTTCGGTAGGCGCAAGAGCG
ATGAACAGTGGGCGCCGATAGTTTAGCACCAGTCAGTGTGAGCAATGCTC
TGAAAGCGACAAGCCGACGTATTCTCCATGTCACCGAATGGTCATTCGTA
CGCACGCACGTGTATGTCACCTGTATATCGTCGATGTTCTCTCTTTGGCT
TTACCTCGAATGTGAAAAAATAAAGGTTCATTTAGTCGATCGACAGACAC
ACCGCCGTTTCGCAAGCGAAAAAAACAGCGGCAAAGACTCTACAGCAGTG
TTTTGGTCATAGTCGAGGGAAAGGTCTATTGCTCGTATCAATGATAACTT
GGCTCGGTAGTCACCGTAGTCACACCTTACTTACTCGCCGTGGGACGTGT
GACGAACCCTAATATATAACTAATATATAACCTGAAGGTTTGTAGCCGTT
GTTCTTAGTCTGCGGTGGTTTTCCACGTCGTGGCTTGCGATTTCGACTGA
TTGACATGCCTGACTTGATTGTACAATTGTTTCCTGAACGCTAGGATCGG
GCCTCCATGCTCTTGATACACGGACTGATCCACCTGCTGGGCTACGACCA
CGAGACACCAGAGGACCACGAGGCTATGGTGCGGGCGGAGGAGGCTGTCC
TCGCGGCTGTGTGGGGGGACAAGGAAACTCGTAATATTTAAGTCACGACG
GGGAGAGGAGATCACAGTACGAGATTTCTACAAAACTGTACTACGTTCTA
AGACTAGTATATACCGTGTTGTACTCCATATAACTTTGAGCGAGGCGGTT
GGAAGGGTGATGGGAAAGACTGAGCGTACACACGAAGGGTGCCGTAAAAG
GGACGTAGCACCTCTAGAGCTTGACGGCAGTCGTTTGAGTCCAACCGGTT
GAACATCTCGCCGGTACTTTCAATATACCCACTTCATACCAATAGTGGGT
ATGGGAAAGAGAGGCGCATATTTGTTGGTCCATGATGACCTGCCAAGGCA
GCATTCGTTCGGAACAACCTTGAGATTTACTGGACCTGTGCCGGCGAACT
CTCGGCAGTGAACGCCGTCGGTACGCAATTGCGTGACCCGATAAACTCGG
GACTGACCCGATTGCGTATTGCGGGTTTCATTAATGGACGCCGCCGCGGA
TCTCGGGAGGAATCCCGTATGTAAGCACCAGATTCAACCTGAGCATGGAG
ATGAGCAGGCTGACGCGGGACGGGACGACTGAACCCGTCTCGCGAGACCA
AATTCTCAGGTACGCACGGGGAGAGGGGAATATTCATTTTCCCTGTTCAG
CTGACCACGAGCAGGATTGGCAACCTTACACGGTTGATCCATACTCTGCT
ATATGTGACGACCATACATACATACATACATACATCGACACTAAATGTCT
GGTATGGTATTGCATGAGTAATTTATTTGTTCTTTAAAATATATATAAAT
ATACCTGGTATATAGTCCATATCATTTAGTAATATACAGTATTCTCTCTC
TCTCTATATATATATATAATATAGTCGGTATATATATGTGTGCATGGAGG
GGAAATATAAGTGGAAGGCTTGCTTCAGACGCAAACGTTCGTTTTTCCAA
AGTTCGTAATGGAAAGTTTGAAATTGTCCCTCAAAGCGTGGAAACTAATC
CTTACCTATATTTCAGCCCTGTTGTGCGATTTGGAAACGATCCCTGTGAA
CAGCAGAAATTCCAGCAGGCGTAGAAAATGTTATGCTTTCCCAAACGGGT
CGAGCCAACGCGACCGTCGATAGCTTGGGCTGTGAAGCACAGGCTGGCGC
AAACTCTCGACCCTGCCGACTCACTGGCAACGGACGGGCCAATTTTCAGA
CCAAGACTTAGCCAATGGCAATCGGCGTGGGAAGGATTGCCGCCTAAATA
GGAGTGGTAAGGCGATCCATTAGAGCACTTAAGCCAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig13:409962..414498+

>mRNA_F-serratus_M_contig13.2188.1 ID=mRNA_F-serratus_M_contig13.2188.1|Name=mRNA_F-serratus_M_contig13.2188.1|organism=Fucus serratus male|type=CDS|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig13:409962..414498+ (Fucus serratus male)
ATGATGCTCCCCAAGTGCTGTGCCTTCGCTTTTGGGAATAATTTTTCCCC
TTGTCGTGGAAGTATCAATGGTGGTGCCTCTTCGGCCGTGCTCGCTGCGC
ACGCCAGCGTCGCAAGCCTTTTTCGTCTAGCGCCGACGTGGAAAGGTGGA
CGTACCTGTAGTACACTTTTTTTGCAATGTCATGCAAGAAGGCCGTCCAT
TAAACGCAGCGGCTTCTGGCACAGCGCGGGGCCGACAGAAGCAGTTCTTG
GCGGGTTTATCGTGCCCGCAGAAAGACGGACTTGTTCATCAAAAAATATT
CGTGGACGACGGTGTGTACGGCCAACAAACAGTAGGCAGCGGCATTCAGG
CTTGAGGTCGTCCATTTTTAGCTCCCCGACAAACTCCGAGACGACCGTGG
ACGGGGAGGAGGTGAAACAAGATGAAGGGCTGTGCTCAGAACAGGACCGG
CTACTCGGCGCGCTTGAGGAAGAGTACCCCCTGGTGGAAGACGGCGAAAA
AAGAGAAGAGTCCCACGAAGGAGAAGGTCATTGGGATGAACTGGATGAGT
CCGAGCTCGAGCGCTTGGGAATACAGATACATATGATGCTCCCCAAGTGC
TGTGCCTTCGCTTTTGGGAATAATTTTTCCCCTTGTCGTGGAAGTATCAA
TGGTGGTGCCTCTTCGGCCGTGCTCGCTGCGCACGCCAGCGTCGCAAGCC
TTTTTCGTCTAGCGCCGACGTGGAAAGGTGGACGTACCTGTAGTACACTT
TTTTTGCAATGTCATGCAAGAAGGCCGTCCATTAAACGCAGCGGCTTCTG
GCACAGCGCGGGGCCGACAGAAGCAGTTCTTGGCGGGTTTATCGTGCCCG
CAGAAAGACGGACTTGTTCATCAAAAAATATTCGTGGACGACGGTGTGTA
CGGCCAACAAACAGTAGGCAGCGGCATTCAGGCTTGAGGTCGTCCATTTT
TAGCTCCCCGACAAACTCCGAGACGACCGTGGACGGGGAGGAGGTGAAAC
AAGATGAAGGGCTGTGCTCAGAACAGGACCGGCTACTCGGCGCGCTTGAG
GAAGAGTACCCCCTGGTGGAAGACGGCGAAAAAAGAGAAGAGTCCCACGA
AGGAGAAGGTCATTGGGATGAACTGGATGAGTCCGAGCTCGAGCGCTTGG
GAATACAGATACATGACGGCGAGAATAGTCAAGACTTCCACGAGCAGCTG
ACACGAGCGTGGGGGACGGTGAACGTGGAGAACCAGCAGGACGAGTACGA
GGTCGACGCTGCTGCCCTCCAGGCTACGGACGGCGAGAATAGTCAAGACT
TCCACGAGCAGCTGACACGAGCGTGGGGGACGGTGAACGTGGAGAACCAG
CAGGACGAGTACGAGGTCGACGCTGCTGCCCTCCAGGCTACGCTACGGAT
GGCAATGGAGGTGCTGGGGTGCCAAGCGTGGGATGTGGCTGTTGTACTGA
CGACGGACGAGGAAGTGCAGCGGCTCAACAGTCAGCTACGGATGGCAATG
GAGGTGCTGGGGTGCCAAGCGTGGGATGTGGCTGTTGTACTGACGACGGA
CGAGGAAGTGCAGCGGCTCAACAGTCAGTACCGAGGGGTCGACGCGTCTA
CCGACATCCTTTCGTTTCCCGTGGCCGATATGTCTGACGAACCCGGAGTT
CTGCCTGAGTACCGAGGGGTCGACGCGTCTACCGACATCCTTTCGTTTCC
CGTGGCCGATATGTCTGACGAACCCGGAGTTCTGCCTGAGGTAAGGATTC
CAGCGGAGATGGACCTCGGAGACATGTTTGTGTCCTTGGCGTACGTTGAC
CGACAGATGGCGAGGGACAAAGAAGAGGTGGAGGGTTTGAAACAGGGCGA
GGAACCTCATGGCGAAGAGGATGGGGCCGAGTGGTGGGACAGCCGCAGGG
GGGTGAGCGGAGCAATGTCCAAGAACTTCGACCTTCAGGTAAGGATTCCA
GCGGAGATGGACCTCGGAGACATGTTTGTGTCCTTGGCGTACGTTGACCG
ACAGATGGCGAGGGACAAAGAAGAGGTGGAGGGTTTGAAACAGGGCGAGG
AACCTCATGGCGAAGAGGATGGGGCCGAGTGGTGGGACAGCCGCAGGGGG
GTGAGCGGAGCAATGTCCAAGAACTTCGACCTTCAGGATCGGGCCTCCAT
GCTCTTGATACACGGACTGATCCACCTGCTGGGCTACGACCACGAGACAC
CAGAGGACCACGAGGCTATGGTGCGGGCGGAGGAGGCTGTCCTCGCGGCT
GTGTGGGGGGACAAGGAAACTCGTAATATTTAAGATCGGGCCTCCATGCT
CTTGATACACGGACTGATCCACCTGCTGGGCTACGACCACGAGACACCAG
AGGACCACGAGGCTATGGTGCGGGCGGAGGAGGCTGTCCTCGCGGCTGTG
TGGGGGGACAAGGAAACTCGTAATATTTAA
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