mRNA_F-serratus_M_contig1295.2173.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 135 bits (340), Expect = 1.260e-31 Identity = 97/331 (29.31%), Postives = 147/331 (44.41%), Query Frame = 1
Query: 1 TLHEVKVSPERSQWRGALKPEMDGQIARGVRKAIDRLKGKIVLGTKIVIKRKVGQDG-------RFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVEL------PDGYRDSPS------------------------------------------DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVVPVSGGRAP---LSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
T + SP QW+ A+ EM ++ G ++ G+ +G+K V + K DG R +A+ F Q G Y E+ T Q+++R LA+ + D R +D+ F+ +D++ P+G+R DD+ S+++ + L F ++DLG Y LG ITR+R R + QR+Y + F + T P + P LSK+ PQ E+ EM IPY AVG+L+++A MTRPD+AYTA +LA+ N G HWKAV L+YLK
Sbjct: 106 TYRQAITSPNAEQWQEAMIEEMTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIYIYQNDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGM--TDCKPATTPMTPNLILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLK 434
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A2P4XRY4_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRY4_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.560e-26 Identity = 96/307 (31.27%), Postives = 138/307 (44.95%), Query Frame = 1
Query: 1 TLHEVKVSPERSQWRGALKPEMDGQIARGVRKAIDRLKGKIVLGTK--IVIKRKVGQD-----GRFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVE------LPDGYRDSPS--------------------DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTR-VVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
T EV S +W A+ EM +D K +G K IKR R +A+ F Q GI Y E+ P + SI A+ D E +DV+ FL DVE PDG+ D P+ DDL+ S TK D + E LRS F +K+LG++ Y LG I R R+ VM +QR Y + + ++ + K + + + A L K+ +++ + + PYRE VGALM++A TRPD+AY +AK + HW A + L+YLK
Sbjct: 500 TYDEVMKSKYNGEWLHAMGSEMKSLEDHQTWTLVDMPSDKKAIGCKWGFRIKRDPNDSIVKFKARLVAKGFTQRPGIDYTETFAPVARKESINAVAAIAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFADQPTRIRSACWDKNSTYSIVIVYVDDLMIFSRTKDDIAEIKEALRSEFSIKELGDLKYCLGIEIHRKREKMIVM-NQRAYIKRLAEKSGVDKCKDIYTPADSSAKLMKSS--EDEYFVAKY---PYRELVGALMYLATSTRPDIAYAVGEVAKFCERYNKSHWVAAKRILKYLK 800
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A5B4D6_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5B4D6_VITVI) HSP 1 Score: 119 bits (298), Expect = 8.760e-26 Identity = 79/236 (33.47%), Postives = 117/236 (49.58%), Query Frame = 1
Query: 172 RFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVELPDGYRDSPS-------------------DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYL 816
R + + + Q +GI ++E+ P T+ S R+ +A++ D E Q+DV+ TFL D++ D Y + P+ D ++ P+ K++ + ++DLGE Y LG I RDR + QR Y + + RF + K+ P+ G SKA PQND EI EMR IPY VG+LM+ TR D+A+ ML + N G HWKA K L+YL
Sbjct: 563 RLVVKGYSQREGIDFKENFSPVXTKDSFRVIMAIVAHFDLELHQMDVKTTFLNGDLDK-DVYMEQPTSFTEVGKEHLALRXWYLKFDRIITPNGFKEN------TVDRCIYLRDLGEASYVLGIKILRDRANGVLKLSQRTYIEKILKRFNMHNCKSSKTPIMKGDK--SKAQCPQNDDEIEEMRTIPYSSVVGSLMYAQVCTRLDIAFVVGMLRRYLSNPGSQHWKAXKKVLRYL 789
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7C626_AGABI (Uncharacterized protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7C626_AGABI) HSP 1 Score: 117 bits (292), Expect = 3.000e-25 Identity = 83/297 (27.95%), Postives = 133/297 (44.78%), Query Frame = 1
Query: 40 WRGALKPEMDGQIARGVRKAIDRLKGKIVLGTKIVIKRKVGQDGRFL-------AQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVELPDGYRDSP----------------------------SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
W ++ E++ + V + + R +GK V+ ++ V K G + A+ F Q+ G Y + S+R+ V L+ E E +E P G+ + +DD+L S T+ + R ++L S+ +KDLG + LG + RD K TV Q Y + + DRF + K R P+ G LS D P++ E+ +M+ IPYREA+G+LMW+ TRPDL+Y ++L++ N G HW A+ + YLK
Sbjct: 106 WLEPMRRELEMMRGKDVYRLVPRPEGKNVVQSRWVFANKYDDTGAIVSRKACLVAKGFTQVIGEDYDKMYALVARLESVRLVNFVSAFLNSEN--------VFEVFMEQPPGFEEGGVTSYYTSRADPQIRSRVVGDELTLTSTWTDDILGVSSTQAGKVRAKQELEKSYELKDLGTASFILGMKMERDEKTGTVTLSQCAYCERILDRFHMADAKPRSTPLPAGLT-LSTDDAPKSLEEMKDMKNIPYREALGSLMWLQVATRPDLSYAVNLLSRFASNPGRAHWNAIKHTIAYLK 393
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A8H7F4A3_AGABI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7F4A3_AGABI) HSP 1 Score: 112 bits (281), Expect = 1.290e-23 Identity = 61/152 (40.13%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 370 SDDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIR--KTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
+DD+L S T+ E E+LRSS +KDLG+ Y LG I D + QR Y++ + +F + K R P+ G LS D PQ+ E +EMR +PYREA+G+LMW+ TRPDL++ ++L++ +N G HW A+ L YLK
Sbjct: 435 TDDILGASSTEIGESTAKEELRSSHELKDLGQAKYILGRRIETDDTTGCIKLSQRAYSERIIKKFNMSDAKPRSTPLPAGIV-LSVDDSPQSAEESSEMRNVPYREALGSLMWLQVATRPDLSFAVNLLSRFANNPGQAHWSALKHTLAYLK 585
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A401GAR7_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GAR7_9APHY) HSP 1 Score: 111 bits (278), Expect = 3.840e-23 Identity = 101/334 (30.24%), Postives = 145/334 (43.41%), Query Frame = 1
Query: 4 LHEVKVSP----ERSQ----WRGALKPEMDGQIARGVRKAIDRLKGKIVLGTKIVIKRKVGQDG------RFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEA---------------DVELPD----------GYRDSPSD--------------------DLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVVPVSGGRAP---LSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
+HE V+P E Q W+ A++ E+DG G + + R G V+G K V RK + G R +A+ F+QI GI Y E+ S+ M A+ D E Q DVE +L A D E PD G+ S +D D+ ++T R+ ++ + + + G+ Y LG I RDR RT+ Q YA+ V RF I+ PV P L A P E EM +PYREA+G +M++A TRPDL+Y +L++ N G HWKA+ L+Y+K
Sbjct: 752 VHEGGVTPSTYKEAGQHADIWQPAMQTEIDGLHKIGAWQLLPRTAGMNVVGCKWVYARKFDETGKWKAKARLIAKGFQQILGIDYFETHASVIHFESLWMICAIATFNDMEMGQDDVEKAYLNATPQEMIYMEQPPGFVDAEFPDHVCLMQRSLYGFMQSGNDWCVRARQDDNGVMVTATYTDDISSCTDTVDGLGRIRGEIGTRYHLSGGGDFKYMLGVIIKRDRDVRTMRISQHPYAERVLKRFSIQYAN--PVHTPLEPSIKLGLATEPITSDEALEMATVPYREALGTIMYLAVTTRPDLSYPVQVLSRYMANPGIIHWKALKCVLRYIK 1083
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A4S4K4A0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K4A0_9AGAM) HSP 1 Score: 104 bits (259), Expect = 6.050e-23 Identity = 55/136 (40.44%), Postives = 79/136 (58.09%), Query Frame = 1
Query: 418 VLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVV--PVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
V E+L F + DLG + LG + RDR R + QR+Y + +RF++ V P+ G LSKA P++ EI M+ +PYR+ VGALM++A TRPD++Y +LA+ N GPGHWKA +YL+
Sbjct: 14 VKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYITDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQ 148
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A146H2N5_MYCCL (Integrase catalytic domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H2N5_MYCCL) HSP 1 Score: 109 bits (273), Expect = 1.760e-22 Identity = 75/281 (26.69%), Postives = 118/281 (41.99%), Query Frame = 1
Query: 169 GRFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADVEL------PDGYRDSPS----------------------------------------------------------DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVVPVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
GR +A Q G+ + ++ PTP S++R LA+ L D E +D+ FL ++ P+G+ + S DD+ S+ + ++ DL+S+F ++DLG + LG + RDR RT+ QR+Y + +RF + V L+ GP ++ + MR PY A GAL ++AN+TRPD+AY +L + N GP HWKAV ++YLK
Sbjct: 973 GRVVAMGNHQRPGLDFDDTFAPTPKWSALRAILAIAALEDLELESVDISSAFLNGEINSKVYMRQPEGFVERDSSWVWKLIKSIYGLKQASRIWHKKLDETLRGLGFQRVSCEHSVWVWKRGEDRVIVPVFVDDITIASKNQPAVAKLKNDLKSAFKLRDLGPTSFLLGVEVIRDRPNRTLSLSQRQYTLDILERFGLADCNPVTTPLDADKLAALAGPLSEEDANYMRDKPYVNATGALSYLANVTRPDIAYAVGVLCRFNANPGPRHWKAVKHLMKYLK 1253
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: UPI00158CDE06 (uncharacterized protein LOC118071078 n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158CDE06) HSP 1 Score: 108 bits (270), Expect = 4.510e-22 Identity = 93/327 (28.44%), Postives = 147/327 (44.95%), Query Frame = 1
Query: 1 TLHEVKVSPERSQWRGALKPEMDGQIARGVRKAIDRLK----GKI--VLGTKIVIKRKVGQDG------RFLAQDFRQIKGIHYQESSLPTPTQSSIRMALAVMLLLDWEGRQLDVEITFLEADV------ELPDGYRDSPSDDLLRPSETKQ-------------------------DEHR---VLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKI-----RKTRVVPVSGG---RAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
T + S E W+ A+ E+ V + IDR K GK ++ ++ V KRKV DG R + + F+ +E+ P +R LA++ D E QLDV+ FL + E+PDG S +D + + K+ DE++ V E L+S F + DLG +LG ITRDRK + ++ +Q+RY + + RF +KT ++ R +++ P+ IPYREAVG+L+++A TRPD+AY ++L++ N WK V + +YLK
Sbjct: 1269 TYRQAMSSSESIYWKEAVDNELKLMSENNVWEIIDRPKLTSDGKRANIIDSRWVFKRKVKDDGEIRHKARLVIRGFKDRNVYELKETYAPVSRLPLVRAVLAIINKYDLEVCQLDVQTAFLNGTIDEEIFMEIPDGIEISDTDRREKVCKLKRALYGLKISPKRWNKRFTEVALVASNDENKLKEVKERLKSEFKMTDLGVPKEFLGIGITRDRKNKILVLNQKRYIEKILKRFNFSESHPQKTPMITTQAANRERKLREESEDPELLRVTKTNENIPYREAVGSLLYLAGATRPDIAYAVNVLSRHQINPVDNDWKMVKRVFRYLK 1595
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM) HSP 1 Score: 105 bits (261), Expect = 7.020e-22 Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 373 DDLLRPSETKQDEHRVLEDLRSSFLVKDLGEIVYYLGCHITRDRKARTVMFDQRRYAQTVTDRFKIRKTRVV--PVSGGRAPLSKADGPQNDAEITEMRGIPYREAVGALMWVANMTRPDLAYTAHMLAKSGDNLGPGHWKAVVKALQYLK 819
DD+ +++K + V E+L F + DLG + LG + RDR R + QR+Y + +RF++ V P+ G LSKA P++ EI M+ +PYR+ VGALM++A TRPD++Y +LA+ N GP HWKA +YL+
Sbjct: 139 DDMTIAAKSKDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQ 288 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1295.2173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1295.2173.1 >prot_F-serratus_M_contig1295.2173.1 ID=prot_F-serratus_M_contig1295.2173.1|Name=mRNA_F-serratus_M_contig1295.2173.1|organism=Fucus serratus male|type=polypeptide|length=317bp MDGQIARGVRKAIDRLKGKIVLGTKIVIKRKVGQDGRFLAQDFRQIKGIHback to top mRNA from alignment at F-serratus_M_contig1295:98653..99742+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1295.2173.1 ID=mRNA_F-serratus_M_contig1295.2173.1|Name=mRNA_F-serratus_M_contig1295.2173.1|organism=Fucus serratus male|type=mRNA|length=1090bp|location=Sequence derived from alignment at F-serratus_M_contig1295:98653..99742+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1295:98653..99742+ >mRNA_F-serratus_M_contig1295.2173.1 ID=mRNA_F-serratus_M_contig1295.2173.1|Name=mRNA_F-serratus_M_contig1295.2173.1|organism=Fucus serratus male|type=CDS|length=1902bp|location=Sequence derived from alignment at F-serratus_M_contig1295:98653..99742+ (Fucus serratus male)back to top |