mRNA_F-serratus_M_contig1294.2164.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A6H5JQ98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ98_9PHAE) HSP 1 Score: 379 bits (972), Expect = 1.640e-121 Identity = 206/278 (74.10%), Postives = 231/278 (83.09%), Query Frame = 3
Query: 390 MPSRGRPSNKAREEEIARALGPERVPENQKREIYERVRRAVDAKNGGCSSHTVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQ----DAHRAKLEAAA-GMN-PTKRHHPDPAAAAAMAAMHEHQMAAMFAANAAS-MAPMHALPGLAQAPPVPEGPGPHLKDEKVEARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKNIKELTALLAALPLADVHTLPVQINPYFISGAVPAGVGPPQPSGSPPHH 1202
M +RGRPS K +E+E+ RALG RVPENQKRE+YERVRRA++AKNG C+SH VGSS WD+ EQ+VLEDGLRYY HD+HSNM IYIRIAA LPKKTVRDVAHHLR MQ D HRAK EAAA GMN P KRHHPDP AAAAMAAMHEH MAAMFAANAA+ MA M LPGLA P GPGPHLKDEKVEARV LL+ENM L+ SIREN++MGRFF+NHPLMI+FDKN+KE+TALLA LP A++ LPVQINPYFI+G++PAGVG QP GSP HH
Sbjct: 1 MAARGRPSAKEKEKEVERALGVHRVPENQKREVYERVRRAMEAKNGVCTSHKVGSSSWDENEQRVLEDGLRYYSHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQARSRDEHRAKPEAAAPGMNNPAKRHHPDPGAAAAMAAMHEHHMAAMFAANAAAGMAAMQTLPGLAPGLAGPSGPGPHLKDEKVEARVCTLLQENMALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQINPYFITGSLPAGVGVQQP-GSPSHH 277
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: D7FV74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV74_ECTSI) HSP 1 Score: 169 bits (428), Expect = 1.760e-46 Identity = 83/107 (77.57%), Postives = 93/107 (86.92%), Query Frame = 3
Query: 390 MPSRGRPSNKAREEEIARALGPERVPENQKREIYERVRRAVDAKNGGCSSHTVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQ 710
M +RGRPS K +++E ARALG RVPENQKRE+YERVRRA++AK G C+SH VGSS WDK EQ+VLEDGLRYYPHD+HSNM IYIRIAA LPKKTVRDVAHHLR MQ
Sbjct: 1 MAARGRPSAKEKDKEDARALGVHRVPENQKREVYERVRRAMEAKTGVCTSHKVGSSSWDKNEQRVLEDGLRYYPHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQ 107
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 4.260e-12 Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 3
Query: 972 MGLLGSIRENIMMGRFFNNHPLMISFDKNIKELTALLAALPLADVHTLPVQINPY 1136
M L+ SIREN++MGRFF+NHPLMI+FDKN+KE+TALLA LP A++ LPVQ + +
Sbjct: 1 MALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQSSTH 55
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: K3WC33_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC33_GLOUD) HSP 1 Score: 63.5 bits (153), Expect = 6.930e-8 Identity = 52/195 (26.67%), Postives = 87/195 (44.62%), Query Frame = 3
Query: 561 WDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQDAHRAKLEAAAGMNPTKRHHPDPAAAAAMAAMHEHQMAAMFAANAASMAPMHALPGLAQAPPVPEGPGPHLKDEKVEARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKNIKELTALLAALPLADVHTLPVQINPYFIS 1145
W +E ++ G +P DK+ N++ YI+IAA LP K VRDVA + + + M+ +H M + P P LA P+P G D+ +A++NALL++NM ++ ++R N++ G+ +N M+ F N + L + + LPVQ++ IS
Sbjct: 31 WSPHEMQIFHRGFAEFPADKYDNVTRYIKIAAMLPGKCVRDVAFKAKALSVSQEK-----------------------MSMNRDHFSKRM------KIEPYQETPTLAF--PIPMG-----GDDPEDAQLNALLQDNMVMMNTMRSNLLSGKLDDNKEPMLKFRDNCHTVLNTLGDI-CNSIPPLPVQLDTSLIS 188
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A836CD79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD79_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.040e-7 Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 3
Query: 525 GGCSSHTVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQDAHRA 725
G +T G++ WD E+ L+ GL Y +HSNM++Y+++AA LPKKTVRDVA + + Q A RA
Sbjct: 249 GAAMRYTSGAAAWDADERATLQRGLERYSPARHSNMTLYVKVAAMLPKKTVRDVAAAVWETQQARRA 315
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A6G0WS86_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS86_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.640e-7 Identity = 53/193 (27.46%), Postives = 90/193 (46.63%), Query Frame = 3
Query: 540 HTVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQDAHRAKLEAAAGMNPT--KRHHPDPAAAAAMAAMHEHQMAAMFAANAASMAPMHALPGLAQAPPVPEGPGPHLKDEKV--EARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKN----IKELTALLAALP 1094
++ + W E +L GL +P +++ N++ YI+IAA++P K++RDVA+ +R M ++ G N ++ H PA A EH N M P+ L +K E + E + L++N ++ SIR N+ G +N PLM F N +K+L+A+ +A+P
Sbjct: 44 YSTAQAAWSPEELHLLHKGLTEFPSERYDNITRYIKIAATIPDKSIRDVAYKIRSMD-------KSVVGNNNQLPQQSHMLPAMAQVKRQKVEH--------NDHGMQPLIPLT---------------IKKETISSEDSIKKSLQDNANVINSIRANLASGELHHNFPLMAHFRDNCSVILKKLSAMCSAVP 206
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A421GWC8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GWC8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 3.750e-7 Identity = 52/201 (25.87%), Postives = 90/201 (44.78%), Query Frame = 3
Query: 540 HTVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQDAHRAKLEAAAGMNPTKRHHPDPAAAAAMAAMHEHQMAAMFAANAASMAPMHALPGLAQAPPVPEGPGPHLKDEKVEARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKNIKELTALLAALPLADVHTLPVQINPYFI 1142
+T + W E ++L GL +P D++ N++ YI+IAA+LP+K VRDVA+ ++ + +P AAA A+ + P A PP G E EAR+ ALL++N+ + ++R N++ G+ N MI F N + + + L + + LP+Q++ +
Sbjct: 36 YTTAQAAWTPQELQMLHAGLAQFPADQYDNVTRYIKIAATLPRKCVRDVAYKVKVLG-------------------YPSGQPAAAAASSTSQPTTNTGVTKRMKIEPYQES---ANQPPASTG-------ELEEARLAALLQDNVLAINTMRTNLLNGKADENRTQMIKFRDNCQTVLSSLGDI-CTSIPPLPLQLDTSLV 206
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A7S4A477_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A477_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.830e-7 Identity = 52/197 (26.40%), Postives = 80/197 (40.61%), Query Frame = 3
Query: 561 WDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQDAHRAKLEAAAGMNPTKRHHPDPAAAAAMAAMHEHQMAAMFAANAASMAPMHALPGLAQAPPVPEGPGPHLKDEKVEARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKNIKELTALLAALPL-ADVHTLPVQINPYFISG 1148
W + EQK LE R YP +HS ++ +IAA LP+K++RDV LR + AL LA A P G H EK + LL++N+ ++ +REN+ + +N PLM FD N++ L AL A + P+++N +++G
Sbjct: 10 WTEAEQKQLETLARRYPSSEHSLVTQCAKIAAGLPRKSIRDVGARLRLL-----------------------------------------------------ALDPLATAQPARPGTARHAALEK---QCRDLLQQNVAVVSEMRENLHKIQLMDNIPLMRRFDANVRATFETLEALESEAQMPPFPLEVNTMYLAG 150
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A8J9RTW0_9CHLO (Probable ribosome-binding protein 1 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RTW0_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 3.250e-6 Identity = 71/239 (29.71%), Postives = 102/239 (42.68%), Query Frame = 3
Query: 543 TVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHH---LRQMQDAHRAKLEAAAGMNPTKRHH---------PDPAAAA---AMAAMHEHQMAAMFAANAASM------APMHALP-GLAQAPPV-PEGPGPHLKDEK------VEARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKNIKELTALLAALP--LADVHTLPVQINPYFISGAVPAGV 1166
T ++ WD EQ L+ L +P D+H + Y+R AA LPKK VRDVA LR A + K+ A R P P A AMA+ MA M AN A AP+ P G+A A PV P P P L D V + LL +N +L ++N+ + N L++ F NI + + ++ + + LPV++N + +P V
Sbjct: 566 TAYTTEWDSAEQAALDSALARFPADRHPPLERYVRAAACLPKKNVRDVALRVAWLRATAAARKRKMADEANSKKQVRRERGQSIFAVQPKPMGGAVGHAMASSVGVGMAGMPGANMAMASGMPMPAPVVVQPHGMAYAQPVVPLAPMPQLDDHGAGTVGGVGGPLAQLLEQNYAILNQFKQNMAAYKVNENTELLVRFRDNILTVLNHMNSMQGVMQQMPPLPVRLNVELANNFLPKAV 804
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Match: A0A024FYI5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYI5_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 4.820e-6 Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 3
Query: 540 HTVGSSPWDKYEQKVLEDGLRYYPHDKHSNMSIYIRIAASLPKKTVRDVAHHLRQMQDAHRAKLEAAAGMNPTKRHHPDPAAAAAMAAMHEHQMAAMFAANAASMAPMHALP-------GLAQAPPVPEGPGPHLKDEKVEARVNALLRENMGLLGSIRENIMMGRFFNNHPLMISFDKN----IKELTALLAALP 1094
++ ++ W E ++L GL +P +++ N++ YI IA+S+P+K VRDVA ++ M L A A ++ +Q+ ALP GL Q +GP L +E +++ LL+EN +L +IR N++ GR +N M+ F N I + + A+LP
Sbjct: 61 YSTANTLWSAEELQLLFRGLNDFPEERYDNVTRYIHIASSIPRKCVRDVAFKVKSMSIQQENLL------------------AQAQDTVNTNQLQKRMKIEQYKDVQATALPLLDQRKMGLDQRC---DGPSDGLSFSTIEVQLHGLLKENAMVLNAIRSNLLSGRIQDNRKQMMQFHGNSQAIISSIGNISASLP 235 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1294.2164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1294.2164.1 >prot_F-serratus_M_contig1294.2164.1 ID=prot_F-serratus_M_contig1294.2164.1|Name=mRNA_F-serratus_M_contig1294.2164.1|organism=Fucus serratus male|type=polypeptide|length=424bp MPSRGRPSNKAREEEIARALGPERVPENQKREIYERVRRAVDAKNGGCSSback to top mRNA from alignment at F-serratus_M_contig1294:168595..173278- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1294.2164.1 ID=mRNA_F-serratus_M_contig1294.2164.1|Name=mRNA_F-serratus_M_contig1294.2164.1|organism=Fucus serratus male|type=mRNA|length=4684bp|location=Sequence derived from alignment at F-serratus_M_contig1294:168595..173278- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1294:168595..173278- >mRNA_F-serratus_M_contig1294.2164.1 ID=mRNA_F-serratus_M_contig1294.2164.1|Name=mRNA_F-serratus_M_contig1294.2164.1|organism=Fucus serratus male|type=CDS|length=2544bp|location=Sequence derived from alignment at F-serratus_M_contig1294:168595..173278- (Fucus serratus male)back to top |