mRNA_F-serratus_M_contig1292.2156.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1292.2156.1
Unique NamemRNA_F-serratus_M_contig1292.2156.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: D7G8X8_ECTSI (GYF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X8_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 2.920e-73
Identity = 196/390 (50.26%), Postives = 215/390 (55.13%), Query Frame = 3 
Query:   27 VERMVEEVHGEEEEGEHYERMNEAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAASTRATKKEDGAGAAGGAAG---ASLGG--KDAVAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKGPVGRGRLPGDKKKXXXXXXXXXXXRANGKAASGGSGIGEEA------------------------------------GSSAGRGGGGKSSADKEAVDAAESKRREDFGRLTDLADGLLQAGLHDVYQLTKEEMEEAAAEAAETEKGWASSTASYFGKAMGGGMAGYRDQHRGQGMQRHEXXXXXXXYQSSAADGKAVTVGT-DESAYFVYRGKDDNIHGPYGASQMKGWAQQGYFDGDQAVMMRKV 1070
            V+RMVE+VHGEEE  EHYER NEAGDPIEPFNLRNERD+GYFDTNGNFVWK+ED ERDAWLAEMDE  MEEAIGAASTRA K  +GA  A GAAG   A LGG   ++++ MGTAEMRE LIPLL EDETVVQALRRLG +K+              XXXXXXXXXXX                                                     GS AG               A E KRREDF RLT+LAD LLQAG HDVYQ TKE++EEAA  A                                                       A T G  +ESAYF YRGKD N+HGPYGASQM+GWAQQGYFDG+QAVMMR+V
Sbjct:  119 VDRMVEKVHGEEEXDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEDGERDAWLAEMDEEAMEEAIGAASTRAPKPSEGAAGATGAAGGAVAPLGGGAAESLSVMGTAEMREALIPLLLEDETVVQALRRLGAKKQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSPAGA-----------RSTAVEKKRREDFARLTELADALLQAGQHDVYQQTKEDLEEAAEVA------------------------------------------------XXXXXXXAATSGAGEESAYFEYRGKDGNVHGPYGASQMRGWAQQGYFDGEQAVMMRRV 449
[Close]
BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A6H5JI10_9PHAE (GYF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI10_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.010e-60
Identity = 196/466 (42.06%), Postives = 229/466 (49.14%), Query Frame = 3 
Query:   27 VERMVEEVHGEEEEGEHYERMNEAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAASTRATKKEDGA-----GAAGGAAGASLGGKDAVAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKGP---------------------VGRGRLPGDKKKXXXXXXXXXXXRANGKAASGGSGIGEEAGSSAGRGGGGKSSADKEAVDAAESKRREDFGRLTDLADGLLQAGLHDVYQLTKEEMEEAAAEAAETEKGWASSTASYFGKAMGGGMAGYRDQHRGQGMQRHEXXXXXXXYQSSAADGKAVTVGTDESAYFVYRGKDDNIHGPYGASQMKGWAQQ---GYFDGDQAVMMRKVSAGDDKMTA----GEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTRGENDMANGGGENAKAGEWILSDRVDWSLY 1325
            V+RMVE+VHGEEEE EHYER NEAGDPIEPFNLRNERD+GY+DTNGNFVWK+E++ERDAWLAEMDE  MEEAIGAASTRA K  +GA        G  A    G  ++++ MGTAEMRE LIPLL EDETVVQALRRLG +K+ P                                 XXXXXXXXXXX                                            EDF RLT+LAD LLQAG HDVYQ TKE++EEAA                                          XXXXXXX               +ESAYF YRGKD N+HGPYGASQM+GWAQQ   GYFDG+QAVMMR+V + + +  A    G                                            +    D + G G+ +   EW+LSD +DW+ +
Sbjct:  108 VDRMVEKVHGEEEEDEHYERTNEAGDPIEPFNLRNERDMGYYDTNGNFVWKQENDERDAWLAEMDEEAMEEAIGAASTRAPKPSEGATXXXXXXXGAVAPLGGGAAESLSVMGTAEMREALIPLLLEDETVVQALRRLGVKKQSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFARLTELADALLQAGQHDVYQQTKEDLEEAA-----EVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESAYFEYRGKDGNVHGPYGASQMRGWAQQASMGYFDGEQAVMMRRVQSKNGEAIASTNGGTSKQAEGTPAQDAPTSNADLLADLDDDEEVEEKDKKEGKGEPAASXXXGDASGGTGKISSQEEWVLSDNIDWTSF 568
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BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A7S4EB88_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EB88_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.430e-17
Identity = 66/137 (48.18%), Postives = 81/137 (59.12%), Query Frame = 3 
Query:   36 MVEEVHGEEEEGEHYERMNEAGDPIEPFNLRNER-DIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAASTRATKKEDGAGAAGGAAGASLGGKDAVAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKG 443
            M +E+ GEE   +  ER NE G+ IEPFNLR ER + G+FD NGNFVWKR D E DAWLA MDE+  E A+G A  R+TK E+  G             D       +E+  ELI LLE  ETV  A+RR+G+  KG
Sbjct:   85 MKDEIEGEE--NDTGERYNEVGERIEPFNLRAERANDGFFDANGNFVWKRGDAEPDAWLASMDEAAEEAAVGEALARSTKMEESDG-------------DEEPSREPSELIVELIQLLEPGETVAAAVRRVGRLLKG 206
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BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A836CCE7_9STRA (GYF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE7_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.630e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 3 
Query:   87 MNEAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAA 254
             NEAG+ +EPFNL+NER  GYFDTNGNFVWK +D E DAWLA +D++ MEEAIG A
Sbjct:   26 FNEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQA 81
[Close]
BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A812X5W5_SYMMI (Cd2bp2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5W5_SYMMI)

HSP 1 Score: 81.3 bits (199), Expect = 4.830e-13
Identity = 54/139 (38.85%), Postives = 85/139 (61.15%), Query Frame = 3 
Query:   42 EEVHGEEEEGEHYERMNEAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAASTRATKKEDGAGAAGGAAGASLGGKDA--VAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKGPVG 452
            EEV GEE++G+  E+ N+AG+ +EPFNLR+ER+ G+FD N N+VW+++  E D+WLA+MDE+TME++IG A+    +K            A    +D      +    ++ EL+  L+  ET++  +RRLGK  +   G
Sbjct:   24 EEVDGEEDDGK--EKFNDAGEVMEPFNLRDEREGGHFDENMNYVWQKDHGEVDSWLADMDEATMEKSIGEAAAALKRKN-----------AKRETEDTGHEVPVDVKALKLELLTHLQPGETILSTMRRLGKTGRSTKG 149
[Close]
BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A4D9CQJ9_9STRA (GYF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.850e-12
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3 
Query:   81 ERMNEAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMD-ESTMEEAIGAASTRATKKEDGAGAAGGAAGASLGGKDAVAGMGTAEMREELIPLLEEDETVVQALRRLG 428
            E  NEAGD +EPFNL+NER  G+FD  GNFVWK+E+   DAWLA ++ E  +E  IG A+    KK+D              G++    +    ++E L+  +   ETV++AL+RLG
Sbjct:   55 EEFNEAGDKMEPFNLKNERTEGFFDETGNFVWKKEEGGEDAWLASLENEEDLEARIGEAAVARKKKDD----------EDAEGEEPPEFVDQWALKERLLMFMRPGETVLRALKRLG 161
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BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A7S3M4V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4V8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 4.910e-11
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 3 
Query:   99 GDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAASTRATKKEDGAGAAGGAAGASLGGKDAVAGMGTA-EMREELIPLLEEDETVVQALRRL-GKQKKGPVGRG 458
            G+ IE FNL +ER+ G+FD N N+V+K+E  E DAW+AEMDE  ME+AIG A+    +K         A       +DA+    TA ++++ELI L++  ETV  A+RRL GK  K    +G
Sbjct:    1 GEVIEAFNLADEREGGHFDENMNYVFKKEKGEVDAWVAEMDEVAMEQAIGEAAKAVKRKA--------AEREEQDRRDAMREFKTAIQLKKELIALMQPKETVAGAMRRLSGKGDKPEASKG 114
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BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A7S3YEZ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEZ5_HETAK)

HSP 1 Score: 71.6 bits (174), Expect = 1.920e-10
Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 3 
Query:   84 RMNEAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTMEEAIGAASTRATKKE 278
            R N+AG+ +E FNL+++R  GYFD +GNFVWK ++ E DAWLA MDE  ME AIG A+ +A K++
Sbjct:  121 RYNDAGEILESFNLKSDRQDGYFDASGNFVWKLQEKEPDAWLAGMDEHEMESAIGQAA-KAQKRQ 184
[Close]
BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: UPI001884CE9B (CD2 antigen cytoplasmic tail-binding protein 2-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884CE9B)

HSP 1 Score: 71.2 bits (173), Expect = 1.260e-9
Identity = 100/353 (28.33%), Postives = 148/353 (41.93%), Query Frame = 3 
Query:   57 EEEEGEHYERMNEAGD-PIEPFNLRNERDIGYFDTNGNFVWKREDNERDAWLAEMDESTM--EEAIGAASTRATKKEDGAGAAGGAAGASLGGKDAVAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKGPVGRGRLPGDKKKXXXXXXXXXXXRANGKAASGGSGIGEEAGSSAGRGGGGKSSADKEAVDAAESKRREDFGRLTDLADGLLQAGLHDVYQLTKE----EMEEAAAEAAETEKGWASSTA-SYFGKAMG------GGMAGYRDQHRGQGMQRHEXXXXXXXYQSSAADGKAVTVGTDESAYFVYRGKDD-NIHGPYGASQMKGWAQQGYFDGDQAVMMRKV 1070
            EE EGE    M + GD  I PFN++ E   G+FD  GN+ WK+E   RDAWL  +D++    +E     S   +  + G               DA+     A + E+++ L+E +E+V +ALRRLG  K       R                  R    AA+G +                      E  DAA  + R D  RLT LAD LL AG  +VYQ+T+E    ++E+     A+  +G     A   FG ++          AG      G G               ++AD +A    T E   F +   +D  +HGP+ +++M  W++ GYF    AV++RK 
Sbjct:   44 EEIEGEEDATMTKDGDIQITPFNMKEEMTEGHFDAEGNYFWKKEVEIRDAWLDNIDDAQQYHDEEQKDGSDDXSSDDQG---------------DALKDSDKAAIYEQMLELMEPNESVAKALRRLGGNKARHSAAARW-----------------RQKRAAAAGAA----------------------EPADAAAGRERMD--RLTGLADRLLSAGHMEVYQMTREAAAHQLEQLRRPVADRLQGATEDDALDMFGDSLDQQPAAPAAAAGEPTPDTG-GAGPPPATDNGKTAPDNSADQEAGDAVTWE---FKWEASEDAEVHGPHTSAEMNAWSESGYFS--DAVLVRKT 334
[Close]
BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Match: A0A7S2VV17_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas chlamydogama TaxID=225041 RepID=A0A7S2VV17_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 1.810e-7
Identity = 66/220 (30.00%), Postives = 101/220 (45.91%), Query Frame = 3 
Query:   93 EAGDPIEPFNLRNERDIGYFDTNGNFVWKREDNE-RDAWLAEMDESTMEEAIGAASTRATKKEDGAGAAGGAAGASLGGKDAVAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKGPVGRGRLPGDKKKXXXXXXXXXXXRANGKAASGGSGIGEEAGSSAGRGGGGKSSADKEAVDAAESKRREDFGRLTDLADGLLQAGLHDVYQLTKEEMEEAAA 749
            E G   EPFNL+ ER+ GYFD +GN+V KRE  E RDAWL   +   + E +     +  K E        AA AS+  +  +     A+++ E+   ++  ET+ + L+R+G    G  G  +  G ++K           + NG+        G++AG++                          F RLT++AD L+  G  DVY  TKEE+E +AA
Sbjct:   39 EDGVKFEPFNLKEERETGYFDESGNYVEKREGREDRDAWLTSDEAKVVSEEVRRKIEQRQKAEA-------AAEASMR-QVPLTDRQIAQLKHEIAQSMQAGETIAKTLKRVGGAAAGAAGHAKAMGKREKARLAAQQ----QGNGQH-------GQQAGAAL-------------------------FSRLTEIADQLVAEGEMDVYTATKEELERSAA 214
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1292.2156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G8X8_ECTSI2.920e-7350.26GYF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JI10_9PHAE1.010e-6042.06GYF domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S4EB88_9STRA3.430e-1748.18Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A836CCE7_9STRA8.630e-1569.64GYF domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A812X5W5_SYMMI4.830e-1338.85Cd2bp2 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A4D9CQJ9_9STRA2.850e-1241.03GYF domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S3M4V8_9STRA4.910e-1142.62Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3YEZ5_HETAK1.920e-1055.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001884CE9B1.260e-928.33CD2 antigen cytoplasmic tail-binding protein 2-lik... [more]
A0A7S2VV17_9CHLO1.810e-730.00Hypothetical protein n=1 Tax=Chlamydomonas chlamyd... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1292contigF-serratus_M_contig1292:106441..111804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score257.3
Seed ortholog evalue1.3e-65
Seed eggNOG ortholog2880.D7G8X8
KEGG koko:K13099
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GYF domain
EggNOG OGs2D0TF@1,2SFEN@2759
Ec32 ortholog descriptionGYF
Ec32 orthologEc-15_004640.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01009,ko03041
Exons8
Model size1843
Cds size1293
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1292.2156.1prot_F-serratus_M_contig1292.2156.1Fucus serratus malepolypeptideF-serratus_M_contig1292 106956..111769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.817616-UTR-F-serratus_M_contig1292:106440..1069551622929235.817616-UTR-F-serratus_M_contig1292:106440..106955Fucus serratus maleUTRF-serratus_M_contig1292 106441..106955 -
1690962762.7602994-UTR-F-serratus_M_contig1292:106440..1069551690962762.7602994-UTR-F-serratus_M_contig1292:106440..106955Fucus serratus maleUTRF-serratus_M_contig1292 106441..106955 -
1622929235.9418926-UTR-F-serratus_M_contig1292:111769..1118041622929235.9418926-UTR-F-serratus_M_contig1292:111769..111804Fucus serratus maleUTRF-serratus_M_contig1292 111770..111804 -
1690962762.8480108-UTR-F-serratus_M_contig1292:111769..1118041690962762.8480108-UTR-F-serratus_M_contig1292:111769..111804Fucus serratus maleUTRF-serratus_M_contig1292 111770..111804 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.8343747-CDS-F-serratus_M_contig1292:106955..1071951622929235.8343747-CDS-F-serratus_M_contig1292:106955..107195Fucus serratus maleCDSF-serratus_M_contig1292 106956..107195 -
1690962762.769996-CDS-F-serratus_M_contig1292:106955..1071951690962762.769996-CDS-F-serratus_M_contig1292:106955..107195Fucus serratus maleCDSF-serratus_M_contig1292 106956..107195 -
1622929235.8458147-CDS-F-serratus_M_contig1292:107628..1076881622929235.8458147-CDS-F-serratus_M_contig1292:107628..107688Fucus serratus maleCDSF-serratus_M_contig1292 107629..107688 -
1690962762.778287-CDS-F-serratus_M_contig1292:107628..1076881690962762.778287-CDS-F-serratus_M_contig1292:107628..107688Fucus serratus maleCDSF-serratus_M_contig1292 107629..107688 -
1622929235.8643086-CDS-F-serratus_M_contig1292:108093..1083321622929235.8643086-CDS-F-serratus_M_contig1292:108093..108332Fucus serratus maleCDSF-serratus_M_contig1292 108094..108332 -
1690962762.7872772-CDS-F-serratus_M_contig1292:108093..1083321690962762.7872772-CDS-F-serratus_M_contig1292:108093..108332Fucus serratus maleCDSF-serratus_M_contig1292 108094..108332 -
1622929235.878855-CDS-F-serratus_M_contig1292:108629..1089491622929235.878855-CDS-F-serratus_M_contig1292:108629..108949Fucus serratus maleCDSF-serratus_M_contig1292 108630..108949 -
1690962762.7977304-CDS-F-serratus_M_contig1292:108629..1089491690962762.7977304-CDS-F-serratus_M_contig1292:108629..108949Fucus serratus maleCDSF-serratus_M_contig1292 108630..108949 -
1622929235.8931718-CDS-F-serratus_M_contig1292:109260..1094671622929235.8931718-CDS-F-serratus_M_contig1292:109260..109467Fucus serratus maleCDSF-serratus_M_contig1292 109261..109467 -
1690962762.8076935-CDS-F-serratus_M_contig1292:109260..1094671690962762.8076935-CDS-F-serratus_M_contig1292:109260..109467Fucus serratus maleCDSF-serratus_M_contig1292 109261..109467 -
1622929235.9073315-CDS-F-serratus_M_contig1292:109800..1098831622929235.9073315-CDS-F-serratus_M_contig1292:109800..109883Fucus serratus maleCDSF-serratus_M_contig1292 109801..109883 -
1690962762.8158872-CDS-F-serratus_M_contig1292:109800..1098831690962762.8158872-CDS-F-serratus_M_contig1292:109800..109883Fucus serratus maleCDSF-serratus_M_contig1292 109801..109883 -
1622929235.9178236-CDS-F-serratus_M_contig1292:110716..1108091622929235.9178236-CDS-F-serratus_M_contig1292:110716..110809Fucus serratus maleCDSF-serratus_M_contig1292 110717..110809 -
1690962762.824858-CDS-F-serratus_M_contig1292:110716..1108091690962762.824858-CDS-F-serratus_M_contig1292:110716..110809Fucus serratus maleCDSF-serratus_M_contig1292 110717..110809 -
1622929235.9299383-CDS-F-serratus_M_contig1292:111718..1117691622929235.9299383-CDS-F-serratus_M_contig1292:111718..111769Fucus serratus maleCDSF-serratus_M_contig1292 111719..111769 -
1690962762.8382864-CDS-F-serratus_M_contig1292:111718..1117691690962762.8382864-CDS-F-serratus_M_contig1292:111718..111769Fucus serratus maleCDSF-serratus_M_contig1292 111719..111769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1292.2156.1

>prot_F-serratus_M_contig1292.2156.1 ID=prot_F-serratus_M_contig1292.2156.1|Name=mRNA_F-serratus_M_contig1292.2156.1|organism=Fucus serratus male|type=polypeptide|length=431bp
MVEEVHGEEEEGEHYERMNEAGDPIEPFNLRNERDIGYFDTNGNFVWKRE
DNERDAWLAEMDESTMEEAIGAASTRATKKEDGAGAAGGAAGASLGGKDA
VAGMGTAEMREELIPLLEEDETVVQALRRLGKQKKGPVGRGRLPGDKKKP
GDAKDKGGDKRANGKAASGGSGIGEEAGSSAGRGGGGKSSADKEAVDAAE
SKRREDFGRLTDLADGLLQAGLHDVYQLTKEEMEEAAAEAAETEKGWASS
TASYFGKAMGGGMAGYRDQHRGQGMQRHEQQQEQHQYQSSAADGKAVTVG
TDESAYFVYRGKDDNIHGPYGASQMKGWAQQGYFDGDQAVMMRKVSAGDD
KMTAGEGAGMGGGDAGGNAKEGSSPGAKPSNEDLMADLDDEDEEEGEEKT
RGENDMANGGGENAKAGEWILSDRVDWSLY*
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mRNA from alignment at F-serratus_M_contig1292:106441..111804-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1292.2156.1 ID=mRNA_F-serratus_M_contig1292.2156.1|Name=mRNA_F-serratus_M_contig1292.2156.1|organism=Fucus serratus male|type=mRNA|length=5364bp|location=Sequence derived from alignment at F-serratus_M_contig1292:106441..111804- (Fucus serratus male)
ATGATGAGGAGGATGACGAACAGGAGGTGGAGCGCATGGTGGAAGAAGTG
CACGGGGAGGAAGAAGAGGGCGAGCACTACGAGAGGGTGAGCAGAGCGCC
CGATAGGGGTGTTTAGAACCCGGGTGGGAGTGTCTCGGCAGAGTGTTTCG
CGTCGCGGTTTTCGAGGGTTTTCATCCGCGTTTGTGTGTGGGCTTTGAGG
GAAGAACAAATTACTCCTCTTAAGGGGAGTGAGGCGGGAAGGGCAAGTTA
TCGGCAGGCTTTCGAGGTTTCGCACTCGGTCTCGTCTCTCTGAAAGCTTG
GTGACGGATGCTATGTTAAAGGTGAATCGAATCGAGCGCACGACGCCTTT
AGGAGGTTGGTGTTGGGGTGAACGCGACTGCGGCACCTCGGCCAGGTCTG
AATTTTGTCGCTCCCGGTTGTGTAGACTTGTTCTACTCCATTTCGTGGCG
ACAGCCTCTTGGCTCAATGCGCTGCGCCGAGCCGACTATGATACAAAATA
ATACATCTGGTACATGGAACCTGATCCCGAAGTGCTGTATGTATGGTCGA
ATGCAGCGAAACACAGCTTTTCAGTACATCAAGTAGTATTGATAGTAACT
TAAAGTGGCCGCAAGGATAGTATTATTGGTAAGATATATAATAGTTATAG
GGTCAGAACCATAAAACAGAAAGTAGAAGGAAATCACCTTAGCGTGAAGG
GGGAAAACCTAAAATAAACCGTAAAACAAAATAATTTATTACCCAAACAA
TATTAATAAAATAACGATAACACAGCATAGTCTATAATCAGAATGTCCTG
CACGCGATTGTTGGACTTGCCATACAGGTAACTTTAGAGAAGGCCTCGGC
CAATAAACTTGTATGTACCTGTACCAGTTACATGATAGATTGATCGTCTA
TGTACGAAGTACTTTTGTGAGAGCGGGAAATACTGTCTTTTGCTGAGATT
TGATGCGAACCGTTACTTGAATGCTGGTGTAAACCTCCGGGACAGATGAA
CGAAGCCGGAGATCCTATCGAGCCCTTCAACCTACGGAACGAGCGGGACA
TTGGCTACTTCGACACCAACGGAAACTTTGTTTGGAAGGTACGGTGCCTC
GCCTCGCCGAGGGAGCGGCTTCGTTGTTGGGACGTGAGAAAGACGCATTT
AACGGCGTGATTTTGAGAGAGGGGCAGCCACAGTGTCGTGTCGCGTGTCA
TGGGTCTCCTTGAACGAATCTTTTCCCTCCTCCAGTTGCGCGGGAGAATT
CGCCGACCAATGAGGATTACATACTGTACCTGTAGCTTTGTTTGCTTTGA
GGTGCGTCGAGAGTCCTTGGGCAATCGAAGCAGCAGACGTCTCCCATACT
TGACCACGTCAACGAGCACGGCAGATCGTTATTTTTATTTTTTTATTTGT
TTTATTTTAATCACACTTATAGCCGATGGACCTCTAATTACCATCCTGCC
TGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCTTGCAATT
TTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAACCAATGGTTG
AATTTTTTGAACTTTACTTACTCACGTTCCCACGCTTTCCGTTACGAAAG
AAAGAGCACAAATTCTGCTTAAGCTAAGATTCGAACTCACGACTTCCGCA
CTAGCAGGTATGCAGGTTACCTACTAGACCACTCGGGCGACGAATGGCTA
CTTATGACTCATTATCTTGAAAGCACCATGTTGACGACGCGGCGTTCGCG
TGATGCGCCGTATCGACCGTGTACGGGGATTGTTTTTCTCCGATCTCCCC
TTCTCCATGCGTGTCGACAAAAAACATTGTCGTCTAAAATTGAATGCTCC
ATCGGCGGCGGCGGCGGCGATGCTCTATTGCGGGGTCATGGCGACGGCGA
ACGACGAACGACCTACAACAGAGGGAAGACAACGAGAGAGACGCTTGGCT
CGCGGAGATGGATGAGAGCACTATGGAAGAGGCCATTGGTGCCGCCAGCA
CACGGTACGTCAGGCCAGCTCGAATTGTTCAGACTTGTGCGCGCCGCGTG
GGAGGTACCTCTGCCGTGGGGAAACAGAAGAAGCTTGACCGTCAGACGAT
CCTAAAGACTTCAAGTACAGTACATAAAGTTGACGTGGCGTTTGAATAAT
GTCTCGTTGCGCCCGTTCCTACCTTTCTCTGTTGCCTGGAAGGCATCAAG
CGGCGACTGACGTACGTGGTTCCCGCGCATCGACGAGCGTTTTACTGATT
TCCACGCTGACCCTCTCCTCTTCTCCTTCCTCGCTCACGTCTTGGTCCTC
GATATTCGGTGCCCCTGGGCAACGCCCCGTACACCAGGGCAACGAAAAAG
GAAGATGGCGCCGGAGCCGCGGGTGGAGCTGCGGGTGCAAGTCTTGGGGG
AAAGGATGCCGTGGCCGGCATGGGAACGGCCGAAATGCGTGAAGAGTTGA
TCCCCTTGCTAGAAGAGGACGAAACGGTAGTGCAGGCGCTTCGAAGGTTG
GGGAAGCAGAAGAAGGGGCCCGTGGGGCGAGGTCGTTTACCGGGGTGAGT
CGAGCTTACCTCCAAGTCGCGATGTCGTACGGATCGACGCATTTTACTGT
ACTGTGTGCATCCGAACGAAGCTGGCCCAACTTCGATCCAAGGGCGGAAT
GGAGGATAATTCCATGTCCTTTTTGTGGCGTTGGCTAAACCACAAACTAT
TCCGTTTCTGAGTCGCTTGTTGTCATCCGTGCGGTCGACCGGATTGGTTC
GAGTTCATTTCCCCCGTCCCTCTCTTGGCGTCTCGGTTGCGGGTAAGCAT
TTCTGTTGTTCCACGAGCCGACTGTTGTTGCCTTCTGCGATTTGCTCCTC
GTTAGCGATAAGAAGAAGCCCGGCGATGCGAAGGATAAAGGCGGCGACAA
GCGAGCGAACGGCAAGGCGGCATCCGGAGGGAGCGGTATTGGAGAGGAGG
CCGGTAGCTCCGCCGGAAGGGGGGGAGGTGGGAAGAGTTCCGCCGACAAG
GAGGCGGTTGATGCAGCGGAAAGTAAGAGGAGGGAAGACTTCGGACGGCT
CACGGATCTCGCGGATGGGCTGCTTCAGGCCGGTCTGCATGACGTGTATC
AGCTTACGAAGGAGGAGATGGAGGAAGCGGCGGCAGAGGCCGCGGAGACA
GAGAAGGGCTGGGCGTCGTCGACGGGTGAGAGGGAAGTTTGACAAAGGAG
AAAGGATAGCAATTGTTCACTCTGAAAACGTTACTCTCAGAATACGGTAT
CGTCCCAGATCCTCAACCCGAAGTGGATTTTTTCTTCGGAGTGCCACCGC
CCTTTTTCTGCGTCCACCATCATGTTGGCCCGTGCATCACACCACTGCTG
TCAACCCTACCTCCTGTCTCGCCGTGCCACGCGCTCTCCTTCCCTGCCCC
GACCGCTGGCATGATATCTGGGGACCTTTTGTCCTTTTCCCTTTTCCATC
TCCCGGGGCCGCCGGATGGTAGCGTCGTATTTCGGGAAAGCGATGGGGGG
AGGTATGGCGGGCTATCGTGATCAGCACCGGGGGCAGGGGATGCAAAGGC
ATGAGCAACAGCAAGAGCAACATCAGTATCAATCGTCGGCTGCCGACGGG
AAAGCGGTGACGGTCGGGACAGACGAAAGCGCGTACTTCGTGTACCGTGG
TAAAGACGACAACATCCACGGACCTTACGGGGCTTCGCAAATGAAGGGAT
GGGCGCAGCAGGTGAGCACTCAGCCGGGTTTATCTCTGAAGGTGGCGGGG
CAGGGGGTAGCGCGGAGGTTTAAATTGGACGGAAATATGCAATGTATGCG
TGCGGAGGATAAAAGTAGCTGATACTTTTTCTTGCGACTGAGCGGTGTTA
TACCCCGTGCAACCGTGGAGATCTGCAAGAGGCTCTAAACCGAGGCAGTT
GGGACTAGGTTGTGTTGTAATTTGTACGCTATTCCAAGTCCGTGATCGTG
TACACTTCTCATTTATAAATCGTGCGTTTGCTTCGGAAGACTCTCCTGCG
CGCGTGAGCGGCGTGACCCGCGGACGCGGCTTGGATCGCTAGGAACGATT
GCTGCAGCCCGTTTCGCTTCGCTTCACACCCCAGCGCGCGCGCACTGGCC
CGTGCACCACTTGCAGGGCTACTTCGACGGTGACCAGGCGGTCATGATGC
GTAAGGTGTCCGCGGGGGATGACAAGGTGCGATGATCGACACCGGTTTGT
TGCGTGGAAAATATGGTAGCGGCGCCCTTCGCTGGTCAAAAATATACTTG
GTACGCCTTTAAAGAAAAATCTTGACGCCATCTCTCTATAATCCTATTGA
GCATCCATCCAATCGGGGAGAAAAGTTGTCAAAACGTCTAGGGAGGAACA
TAGACTGGGTTGTCAGTACGATTTTTTTTCATGGGATTAGTCGAGTTCCC
CAATGGGTAGTAACATACGGTCGATAGTTCTTACGCCTGCCCCTGGGCTG
AATGCAAGCGAAAAATGGAGCAATTGTATGGCCCCGCACTGGCGTCTTCG
AAATGCCCCCCCAAGCCGCAGCTTTTGTTCACGTGCTCCCCCGCGCGTCA
ACGCTCTGGTTTCATTGAAATTCTTTGTGTGTGTGGGGCGGGGGACACTT
GATGCGCAGATGACGGCAGGAGAGGGAGCGGGTATGGGTGGAGGCGATGC
GGGGGGGAACGCAAAGGAAGGAAGTTCCCCAGGTGCGAAGCCGTCGAATG
AAGATCTCATGGCCGATTTAGATGACGAAGATGAAGAGGAAGGAGAAGAG
AAGACTCGCGGCGAAAACGATATGGCTAACGGAGGAGGAGAGAACGCTAA
AGCGGGAGAGTGGATCCTGTCCGACCGCGTAGACTGGTCCTTGTACTGAA
GGGTTGCAGTCGCTTCAAGGGGGTTACTTGCTTGCGGCGCATTATTTTTT
GTAGGGTTTCTCTTTGCTTTTGTGGTTACGGACTGTCTCTTGTACGTGAC
TGGTTATCACATGTTTCCAAAATGAACGATTTATCCGAGAATGCAGCGGT
CTCAAGAAAAATGTGTATCGGTGGACGCTCGAGCCCTCTACTCAGCGCTC
TTCTGGTTCGAGCCGGATGAGCCTTGTGAAAGCTGCGTTGGGGTCTCGCG
TTTGCGTACCTCCGTCGTCAATGATGCAACTTAAACTGGGAGTTAGAGCC
TACTACTGCAAGTGCATGGTGCGTTATTGTTTTATGTCTGTGTATTCTTC
ACATGAACCATCGAGCCTCTACCATACCCAGTTATAGACACGGTTGCCAA
CCCGGTACGTGGTCTGTTGGACGGGAAAATAGCAGAGTATGAAATCAAGC
AGCCAGTTCACTGTCGTAACCCTTCATGAGATGATAACGAACGAGATCGA
ACGGGCCTTACCGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1292:106441..111804-

>mRNA_F-serratus_M_contig1292.2156.1 ID=mRNA_F-serratus_M_contig1292.2156.1|Name=mRNA_F-serratus_M_contig1292.2156.1|organism=Fucus serratus male|type=CDS|length=2586bp|location=Sequence derived from alignment at F-serratus_M_contig1292:106441..111804- (Fucus serratus male)
ATGGTGGAAGAAGTGCACGGGGAGGAAGAAGAGGGCGAGCACTACGAGAG
GATGGTGGAAGAAGTGCACGGGGAGGAAGAAGAGGGCGAGCACTACGAGA
GGATGAACGAAGCCGGAGATCCTATCGAGCCCTTCAACCTACGGAACGAG
CGGGACATTGGCTACTTCGACACCAACGGAAACTTTGTTTGGAAGATGAA
CGAAGCCGGAGATCCTATCGAGCCCTTCAACCTACGGAACGAGCGGGACA
TTGGCTACTTCGACACCAACGGAAACTTTGTTTGGAAGAGGGAAGACAAC
GAGAGAGACGCTTGGCTCGCGGAGATGGATGAGAGCACTATGGAAGAGGC
CATTGGTGCCGCCAGCACACGAGGGAAGACAACGAGAGAGACGCTTGGCT
CGCGGAGATGGATGAGAGCACTATGGAAGAGGCCATTGGTGCCGCCAGCA
CACGGGCAACGAAAAAGGAAGATGGCGCCGGAGCCGCGGGTGGAGCTGCG
GGTGCAAGTCTTGGGGGAAAGGATGCCGTGGCCGGCATGGGAACGGCCGA
AATGCGTGAAGAGTTGATCCCCTTGCTAGAAGAGGACGAAACGGTAGTGC
AGGCGCTTCGAAGGTTGGGGAAGCAGAAGAAGGGGCCCGTGGGGCGAGGT
CGTTTACCGGGGGCAACGAAAAAGGAAGATGGCGCCGGAGCCGCGGGTGG
AGCTGCGGGTGCAAGTCTTGGGGGAAAGGATGCCGTGGCCGGCATGGGAA
CGGCCGAAATGCGTGAAGAGTTGATCCCCTTGCTAGAAGAGGACGAAACG
GTAGTGCAGGCGCTTCGAAGGTTGGGGAAGCAGAAGAAGGGGCCCGTGGG
GCGAGGTCGTTTACCGGGCGATAAGAAGAAGCCCGGCGATGCGAAGGATA
AAGGCGGCGACAAGCGAGCGAACGGCAAGGCGGCATCCGGAGGGAGCGGT
ATTGGAGAGGAGGCCGGTAGCTCCGCCGGAAGGGGGGGAGGTGGGAAGAG
TTCCGCCGACAAGGAGGCGGTTGATGCAGCGGAAAGTAAGAGGAGGGAAG
ACTTCGGACGGCTCACGGATCTCGCGGATGGGCTGCTTCAGGCCGGTCTG
CATGACGTGTATCAGCTTACGAAGGAGGAGATGGAGGAAGCGGCGGCAGA
GGCCGCGGAGACAGAGAAGGGCTGGGCGTCGTCGACGGCGATAAGAAGAA
GCCCGGCGATGCGAAGGATAAAGGCGGCGACAAGCGAGCGAACGGCAAGG
CGGCATCCGGAGGGAGCGGTATTGGAGAGGAGGCCGGTAGCTCCGCCGGA
AGGGGGGGAGGTGGGAAGAGTTCCGCCGACAAGGAGGCGGTTGATGCAGC
GGAAAGTAAGAGGAGGGAAGACTTCGGACGGCTCACGGATCTCGCGGATG
GGCTGCTTCAGGCCGGTCTGCATGACGTGTATCAGCTTACGAAGGAGGAG
ATGGAGGAAGCGGCGGCAGAGGCCGCGGAGACAGAGAAGGGCTGGGCGTC
GTCGACGGCGTCGTATTTCGGGAAAGCGATGGGGGGAGGTATGGCGGGCT
ATCGTGATCAGCACCGGGGGCAGGGGATGCAAAGGCATGAGCAACAGCAA
GAGCAACATCAGTATCAATCGTCGGCTGCCGACGGGAAAGCGGTGACGGT
CGGGACAGACGAAAGCGCGTACTTCGTGTACCGTGGTAAAGACGACAACA
TCCACGGACCTTACGGGGCTTCGCAAATGAAGGGATGGGCGCAGCAGCGT
CGTATTTCGGGAAAGCGATGGGGGGAGGTATGGCGGGCTATCGTGATCAG
CACCGGGGGCAGGGGATGCAAAGGCATGAGCAACAGCAAGAGCAACATCA
GTATCAATCGTCGGCTGCCGACGGGAAAGCGGTGACGGTCGGGACAGACG
AAAGCGCGTACTTCGTGTACCGTGGTAAAGACGACAACATCCACGGACCT
TACGGGGCTTCGCAAATGAAGGGATGGGCGCAGCAGGGCTACTTCGACGG
TGACCAGGCGGTCATGATGCGTAAGGTGTCCGCGGGGGATGACAAGGGCT
ACTTCGACGGTGACCAGGCGGTCATGATGCGTAAGGTGTCCGCGGGGGAT
GACAAGATGACGGCAGGAGAGGGAGCGGGTATGGGTGGAGGCGATGCGGG
GGGGAACGCAAAGGAAGGAAGTTCCCCAGGTGCGAAGCCGTCGAATGAAG
ATCTCATGGCCGATTTAGATGACGAAGATGAAGAGGAAGGAGAAGAGAAG
ACTCGCGGCGAAAACGATATGGCTAACGGAGGAGGAGAGAACGCTAAAGC
GGGAGAGTGGATCCTGTCCGACCGCGTAGACTGGTCCTTGTACTGAATGA
CGGCAGGAGAGGGAGCGGGTATGGGTGGAGGCGATGCGGGGGGGAACGCA
AAGGAAGGAAGTTCCCCAGGTGCGAAGCCGTCGAATGAAGATCTCATGGC
CGATTTAGATGACGAAGATGAAGAGGAAGGAGAAGAGAAGACTCGCGGCG
AAAACGATATGGCTAACGGAGGAGGAGAGAACGCTAAAGCGGGAGAGTGG
ATCCTGTCCGACCGCGTAGACTGGTCCTTGTACTGA
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