mRNA_F-serratus_M_contig1290.2149.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1290.2149.1
Unique NamemRNA_F-serratus_M_contig1290.2149.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 1.240e-119
Identity = 203/348 (58.33%), Postives = 250/348 (71.84%), Query Frame = 1
Query:  226 NIAKKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVA--TVTKTAGECVTVRGAEVQS-----GRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRNDKSLGRHPRQNP--WDSYACLRGYNVGAHVRSARSTTTSKRKA 1242
            N   KR+ +V++ ELL+FIFPKS+QHPLSTGRLYAFA YGPLD N+ +R+G  G R+VS  E+DTMCLQFEREDILQVY+SGGRPLF+LN+AQKEEVIAQA+SHLKTAKGRGYRRQVTR EVV LLS LPR  +  VSFHDAQ+ I  YR++QIARF+V+FP+ +  G    +   A  S  + +     + +    G    G +   +A  TV   A     +   E  S     G   +R G  AK SA+VAPAEMF++D+G+TPAG+ANHT+KLLSTR +KVS+IAD N PGLT+NV+LIR+D    R P Q    WD YACLRGYN+G HVRSARS+TT+KRKA
Sbjct:    8 NATGKRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPE-IAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGGGAKRKGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDD----RQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK)

HSP 1 Score: 211 bits (536), Expect = 4.170e-59
Identity = 130/337 (38.58%), Postives = 184/337 (54.60%), Query Frame = 1
Query:  235 KKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRN--DKSLGRHPRQNPWDSYACLRGYNVGAHVRSARSTTTSKRK 1239
            +K   +V ++ L+ F+FP  +QHPLSTGRL+AF  YGPLDEN+ +R+G  G  IV   E+D MC +FERE ILQVY+ G     +L+E++ E VIAQA+   K AKG+    QV+R E   L + LPRD    +SFHD QR I EYR+++IA  +V+FP+L+                               P       Q   V+   +        +   + +GR+   S +   LS  VAP EMF +  G+T   M++  N+LLS   F+++ I   N   LT+NV+L+R   +   GR      WDS +CLRG N+G HV++A+S TT KRK
Sbjct:   36 RKAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDP-------QQAAVSDAGEPGSXXXXFK--LMDAGRQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGRK-----WDSNSCLRGSNIGGHVKTAKSATTVKRK 357          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.900e-58
Identity = 130/324 (40.12%), Postives = 181/324 (55.86%), Query Frame = 1
Query:  277 FIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEAR-TVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRND-KSLGRHPR-QNPWDSYACLRGYNVGAHVRSARSTTTSKRK 1239
            F+FP+++QHP+STGRL+AF  YGPLD +A +R+G  G  +V   E+DTMC QFEREDILQ+Y+  G+    L E Q EE++AQA+S LK AKG+   +QVT  EV  + S L  D A   + FHD Q+ I EYR+  I   + +FP++ +  +   R+ S K+                       G +FTP+  +  T  E           GR   R  R  ++ A VAPA MFLRD G     +A+ TNKLL  + F + +IAD N   LT NVRL+R++ K     P  ++ WD     RG  +GA V++ +S+TT KRK
Sbjct:    7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTSKAK---RIGSLKS-----------------------GPEFTPIGPLGATYNE--------FGPGRSTGRRTRGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.570e-45
Identity = 110/308 (35.71%), Postives = 162/308 (52.60%), Query Frame = 1
Query:  253 VDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRNDKSLGRHPRQNPWDSYACL 1176
            V +D+L+ F+FP  + HPLSTGRLYAF  YGPLD    +R+G  G  ++   E+D MC QFERED LQVYVS GR L  L+E Q+ E+I+QA++ +K+ +G+G   Q+++ EV  +  G+      T+ FH+ Q+ +  +R+ +I + RVM+P                             L++R P     GG  T                   + S ++ RR+  +AK+S  VAP  MF +D G   + +A   N++L TR +K+  I D N P LT+NV LIR D    R   + PW   +CL
Sbjct:   78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYP-----------------------------LVARKPLRVGFGGSQTASRK--------------SLTSTKRSRRT--TAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDK-DRELGEGPW---SCL 335          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.010e-44
Identity = 121/331 (36.56%), Postives = 153/331 (46.22%), Query Frame = 1
Query:  247 ARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHT--------------------NKLLSTRVFKVSHIADANCPGLTENVRLIRNDKSLGRHPRQN--PWDSYAC 1173
            ARV +D+LL FIFP  +QHPLS+GRL  F  YGP   N  + +G+ G  +V   E+D+MC   +RED+LQVYVS  RPL  L  AQ+EE+IAQ+              Q+TR +V+ L  G+PR      SFHD Q+ +  YR R++A  ++M+P L    +               SP             PR   Q T   T T    +    RG                K S DVAPA MFL+D G     MA                       NKLLST+ FK+S I D N P LT NVRLIR D +   H  Q    WD   C
Sbjct:   26 ARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLAAHSK---------------SP-------------PRKRAQSTEKGTATAAQRQSPISRG-------------HKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTT---HQPQGGAQWDETCC 302          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.130e-33
Identity = 91/227 (40.09%), Postives = 123/227 (54.19%), Query Frame = 1
Query:  307 LSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLR 987
            +STGRL AF  +GPLD  A +R+G  G  +VS  E+DTMC QFEREDILQVY+  G+    L E +  E++AQA++ +K AKG+   +QVT  EV +L + L RDE   ++FHD Q+ I ++R+  I   +V+FP L T G G+             SP          P   RHGGQ +                     S RKDRR   S+++S  VAP EMFL+
Sbjct:    1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHL-TPGVGK----------PGASP----------PSGERHGGQKSGT-------------------SARKDRRKKTSSRVSESVAPLEMFLK 187          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A6A5AZ06_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZ06_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.500e-32
Identity = 98/307 (31.92%), Postives = 151/307 (49.19%), Query Frame = 1
Query:  247 ARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVY--VSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEART-VSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRND--KSLGRHPRQN 1152
            + V +D L+DF+FP ++QHP STGRL+ F+ YGPLD  + +R+G  G+ +V+  E++TMC+  EREDIL VY  +   R   +   +Q+EEV+ QA+ H+K      +  + TRA++ ++   +P  +    +SFH  QR I E R R++     M  +L T               T  +P     ++S+      +    +  ATVTK                               VAP  MF++D+G   +  A    +LL+   F++ H+AD N P LT+NVRL+R D    L R P  N
Sbjct:   28 STVHLDALMDFLFPPNVQHPNSTGRLFVFSLYGPLDAKSRLRSGEKGMHVVTDIELNTMCVSIEREDILSVYGMIGLSRDEILYIPSQEEEVLRQADKHMK------HLPRYTRADIQEMFRHVPHTKNDGFMSFHAMQRRIMEERIRRVL---CMKDNLNT---------------TLATP-----IVSK------YRKSLSTTATVTKY-----------------------------QVAPPSMFVKDMGLNGSENAVVVARLLNCHAFQICHLADGNSPELTQNVRLVREDIASPLPRLPWNN 270          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A8K1CAS7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAS7_PYTOL)

HSP 1 Score: 132 bits (333), Expect = 8.520e-30
Identity = 98/302 (32.45%), Postives = 144/302 (47.68%), Query Frame = 1
Query:  232 AKKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEART---VSFHDAQRAITEYRKRQIARFRV-MFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRNDK 1125
              K +A VD+D+LL F+FP  +QH  STGRL+ +  YGPL+  A + AG  G+ +V+ RE+DTM  + ERED+L VY      +  L++ ++EEVIAQ ++ LK+      R      ++  LL  +PR +  +   +SFHD Q AI   R R++   +  + P L T              N Y    +  E I+     P+H                                            AP  MFL DVG T A  A    +LLS+R F++ H+ +AN P LT+NVRL+R+D+
Sbjct:  196 GSKSDAAVDVDQLLTFLFPPHVQHANSTGRLFVYGLYGPLNAQAQLCAGEKGLHVVTDREVDTMARRMEREDLLAVY-----HMCSLSQHEEEEVIAQIDNALKSFPRHSKR------DIGTLLDKVPRQQTVSGEFLSFHDLQTAILHERMRRVVCMKTRIHPALAT-----------PIQNKYRQTLTRLEQIT-----PKH--------------------------------------------APPSMFLHDVGLTGAENATLVTRLLSSRAFQICHLDNANSPALTQNVRLLRDDR 426          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A5D6Y3J0_9STRA (NDK domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3J0_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.170e-26
Identity = 91/307 (29.64%), Postives = 139/307 (45.28%), Query Frame = 1
Query:  229 IAKKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLS---------GLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRND 1122
            +   R+A VD+++LLDF+FP+ +QHP S GRL+ F  YGPLD  A +R+G  G+ +V+  E+ TM  + EREDIL VY      +  L++ ++E V+ Q +  +K+     Y  +  RA    LLS          +     R +SFH+ Q AI + R R++   +                                           H     P+    +      T++              R AK + +VAPA  FL+D G+T A  A    +LLS   F + H+ D N P LT+NVRL+R++
Sbjct:  200 VKSGRSAEVDLEQLLDFLFPRHLQHPNSAGRLFVFGLYGPLDAKARLRSGEKGLHVVTDLELTTMSKRMEREDILSVY-----KMCSLSQEEEEAVLMQVDQLMKSFPQ--YTPRDIRALFQSLLSRADAELDADNVGHHGTRVLSFHEMQAAIMKERCRRVLCMKEKL----------------------------------------HPALAPPIQNKYRA-----TLK--------------RLAKSADEVAPASFFLKDAGFTGAENATLVARLLSNHSFAICHLDDGNSPSLTQNVRLLRDE 440          
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A6G0WC23_9STRA (NDK domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC23_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.020e-24
Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 1
Query:  253 VDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQI 687
            V +D L+ F+FP ++QH  STGRL+ FA YGPLD  + +R+G  G+ +V+  E+DTMCL  EREDIL VY   G     L+ A++E+V+ QA+ ++K         + TRA++ QL   +PR+    +SFHD Q  IT+ R R+I
Sbjct:  224 VSLDALMQFLFPPNVQHANSTGRLFVFALYGPLDSKSRLRSGEKGLHVVTDGELDTMCLSMEREDILSVYGMIG-----LSRAEEEQVLGQADQNMKDVP------RYTRADIQQLFRTVPRNANGLMSFHDMQEKITKERLRRI 357          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT36_ECTSI1.240e-11958.33Aspartyl protease family A01A, putative n=1 Tax=Ec... [more]
A0A7S3Y154_HETAK4.170e-5938.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B712_9STRA2.900e-5840.12Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A522_9STRA2.570e-4535.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZGK5_9STRA2.010e-4436.56Putative aspartyl protease family A01A n=1 Tax=Tri... [more]
A0A7S2RFT5_9STRA6.130e-3340.09Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6A5AZ06_9STRA9.500e-3231.92Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A8K1CAS7_PYTOL8.520e-3032.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y3J0_9STRA2.170e-2629.64NDK domain-containing protein n=1 Tax=Pythium bras... [more]
A0A6G0WC23_9STRA1.020e-2443.45NDK domain-containing protein n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1290contigF-serratus_M_contig1290:220722..223959 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.3
Seed ortholog evalue5.1e-100
Seed eggNOG ortholog2880.D7FT36
Hectar predicted targeting categoryother localisation
EggNOG OGs2CN2N@1,2QTJA@2759
Ec32 ortholog descriptionaspartyl protease family A01A, putative
Ec32 orthologEc-04_002690.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1816
Cds size1095
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1290.2149.1prot_F-serratus_M_contig1290.2149.1Fucus serratus malepolypeptideF-serratus_M_contig1290 220872..223388 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929233.4683392-UTR-F-serratus_M_contig1290:220721..2208711622929233.4683392-UTR-F-serratus_M_contig1290:220721..220871Fucus serratus maleUTRF-serratus_M_contig1290 220722..220871 +
1690962761.8579588-UTR-F-serratus_M_contig1290:220721..2208711690962761.8579588-UTR-F-serratus_M_contig1290:220721..220871Fucus serratus maleUTRF-serratus_M_contig1290 220722..220871 +
1622929233.5902436-UTR-F-serratus_M_contig1290:223388..2239591622929233.5902436-UTR-F-serratus_M_contig1290:223388..223959Fucus serratus maleUTRF-serratus_M_contig1290 223389..223959 +
1690962761.90139-UTR-F-serratus_M_contig1290:223388..2239591690962761.90139-UTR-F-serratus_M_contig1290:223388..223959Fucus serratus maleUTRF-serratus_M_contig1290 223389..223959 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929233.4812632-CDS-F-serratus_M_contig1290:220871..2211771622929233.4812632-CDS-F-serratus_M_contig1290:220871..221177Fucus serratus maleCDSF-serratus_M_contig1290 220872..221177 +
1690962761.8687284-CDS-F-serratus_M_contig1290:220871..2211771690962761.8687284-CDS-F-serratus_M_contig1290:220871..221177Fucus serratus maleCDSF-serratus_M_contig1290 220872..221177 +
1622929233.5600717-CDS-F-serratus_M_contig1290:222166..2227331622929233.5600717-CDS-F-serratus_M_contig1290:222166..222733Fucus serratus maleCDSF-serratus_M_contig1290 222167..222733 +
1690962761.8770373-CDS-F-serratus_M_contig1290:222166..2227331690962761.8770373-CDS-F-serratus_M_contig1290:222166..222733Fucus serratus maleCDSF-serratus_M_contig1290 222167..222733 +
1622929233.5749764-CDS-F-serratus_M_contig1290:223166..2233881622929233.5749764-CDS-F-serratus_M_contig1290:223166..223388Fucus serratus maleCDSF-serratus_M_contig1290 223167..223388 +
1690962761.885808-CDS-F-serratus_M_contig1290:223166..2233881690962761.885808-CDS-F-serratus_M_contig1290:223166..223388Fucus serratus maleCDSF-serratus_M_contig1290 223167..223388 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1290.2149.1

>prot_F-serratus_M_contig1290.2149.1 ID=prot_F-serratus_M_contig1290.2149.1|Name=mRNA_F-serratus_M_contig1290.2149.1|organism=Fucus serratus male|type=polypeptide|length=365bp
MVESDEDGFIPDGRDDTIINNTNNTNIAKKRNARVDMDELLDFIFPKSMQ
HPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDI
LQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQL
LSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLS
SAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGA
EVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRV
FKVSHIADANCPGLTENVRLIRNDKSLGRHPRQNPWDSYACLRGYNVGAH
VRSARSTTTSKRKA*
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mRNA from alignment at F-serratus_M_contig1290:220722..223959+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1290.2149.1 ID=mRNA_F-serratus_M_contig1290.2149.1|Name=mRNA_F-serratus_M_contig1290.2149.1|organism=Fucus serratus male|type=mRNA|length=3238bp|location=Sequence derived from alignment at F-serratus_M_contig1290:220722..223959+ (Fucus serratus male)
AGGGGATGCTCGGGTGGTTTGGATACACGCTCCTATTTTTCTAACAACTA GAGGAGTCTCCCGTTGAGAGCGTCAATTCGATGTAAAGCGTTGCAACGCT CTCAACCACGAGAAATCGATTGCGGTCGGTCCCTGGATCGAGTCAGACAC ATGGTGGAGTCAGACGAAGACGGATTCATCCCCGATGGTCGTGATGATAC TATTATTAATAATACTAATAACACCAACATCGCAAAGAAACGGAATGCTA GAGTGGACATGGACGAACTCCTAGACTTCATCTTTCCGAAGTCGATGCAG CATCCTCTCTCCACTGGCAGGCTCTACGCATTCGCCGCATATGGCCCCCT GGACGAGAACGCAAATGTTCGAGCAGGTCGTGGCGGCATACGGATCGTTA GCCCTCGGGAAATGGACACGATGTGTTTGCAGTTCGAGCGCGAGGATATT CTGCAGGTGGGCTCCGATGTCGAGTGTGCGGAGCGTCGGATCAAAATGGG CGCACGCACGTGCCACTCAGTCGTTCTAGGAACAGTAGTAAGAAGTATGG TCCAAATGATCGAAACAAAGTCAGTACTGTAGTGCAACGACACCCCTGTA TCGCTTAGTTTGTTATCCGAAGCTTGATTAGTCCTCACGACTTGCACCGA GAAGGTATGAAATCGTATACAAGGTTGTTGTACACGCATGGATATTGTAC TCGCCACGCCTCATGGGCATGCTACACGCCGCATGGCGTACTGTCCTGTA ACACGAGGCATGGCGTGCACGATGAGGTGTGGGCGCACGCTACCGCGTGC TGTATCTTACACCGCATGCATGGCGCATTACGTGAGACATGGCGTGCGGG CGCACAATGCACGCCTTGGTATAGGCACCGTGCTGTTCTACGGGCAAGCA AAGTAAAATATTTTTCATTACGTAGTAGTAAGCCGTGGCGTGCATGGCGG ACTTCAGCCTGTGCGTCATCGCCTGAATCGCCAGAAGAAAACATATTTGA AGAAGGTGTTTCAAACAGCAGATAGAACCTAAGATTGTACAAAGGGTGAA AAAAAACTCAATCACCAACAGCGACGATAGGAGCTACTACAGTAGACTGT CAACAAATCAGGAACGAAGGGAATGCCTGCACTGGCAGACTTCCAGAAAA TAATGTCGAACATGAACTTTCACGGCACTTCGATGTCTTCACGCATGGCG AAAGCCACGGATGCATGCCATGCGGGGTTGAGGTGCACAACATACACGAC TTGAGGTATGGCGCAAATTTTATGCAACGGAATTAATGACGGAAAACCTC GTCTTGAGAAAAAGTTTCCAGATCCTTGGATCTTCTTGTGGTTATACGAT CCCAGCTCGCTCGCGCGATGCAAACAAGACTGGTGTTCTACAAAATCAGC CTACGGGCGACAAAGAGCCAGTCGCATTGTACCCCGCCACAACAGGTTTA TGTCTCAGGCGGGCGTCCGCTGTTTATCCTGAACGAAGCCCAGAAGGAAG AAGTCATCGCTCAGGCAGAAAGCCACCTCAAGACCGCCAAAGGGCGGGGC TACCGACGGCAAGTAACCCGCGCCGAGGTGGTCCAACTCTTGTCGGGGCT GCCTCGCGACGAGGCTAGGACGGTGAGCTTCCATGACGCACAGAGGGCTA TAACGGAGTACCGTAAGCGGCAGATCGCCCGGTTCAGGGTCATGTTCCCC GATCTTGTCACCTGGGGAGAGGGGGAATCAAGGTTGTCCTCAGCTAAAGC GTCGAACACTTACGTTTCCCCCTCAAGTAGCTCGGAGTTGATTTCGCGGG GACCAGGGGCACCAAGACACGGCGGACAATTTACGCCTGTGGCAACCGTT ACGAAGACGGCGGGTGAGTGCGTCACGGTGCGCGGAGCCGAGGTGCAATC GGGACGTAAAGACCGTCGTAGTGGAAGAAGCGCAAAGCTCAGCGCCGATG TTGCGCCAGCGGAGATGTTTTTAAGGGACGTCGGCTATACCCCCGCCGGG ATGGCAAACCACGTGAGTCTTCTTTTCGAGGTGACACCTCTGTTCGGCGC AAGCTACCCTTTGATGGTGTGCTGCTATGCCATCTCTGATGATTGGAACT ACGCAGAAGTCCAAATGGCCTAACTTCTAAATACAGGGGTTCCTAACTGT TTGAGCATGCCTGTTCCGTCATTATCACATACAGTATAATATACGAACCA CCAGACTACAAACCTTATATAGCGAGACGGAGCACGTACATAAGCATTCA AATGTTTTGTCCAGGGCATTTTATTTATTAGCTTTTTGGAAGATTGTACT TTTTCACAAAGTTTATCGCTTCTCTATTATCTAACAATTTCGCTTTGCTT CTCTATTATCTAACAATTTCTTGGCTCCTGGTATCCACAAAAAAATCCTT GCCTTCCAACAAAAATCCCTTTCGTGTCCTTTTCGAGTGCAACAGACGAA CAAGCTTCTGAGCACCCGCGTGTTTAAGGTGAGCCACATCGCCGATGCGA ACTGTCCAGGCCTCACCGAGAACGTCAGGCTCATCCGCAACGACAAGTCC CTTGGCCGTCATCCGAGACAGAACCCCTGGGACTCGTACGCCTGCCTCAG AGGGTATAACGTCGGCGCGCACGTGCGATCGGCGAGAAGCACGACCACGT CTAAGCGCAAGGCGTAAAATAGCACACTTAACGACGTATGTATCCCGTAG AATGATAGCTGCTTTGATGGGTGTTGACCACGCTGTCTCCCGGTCTTGTC TGGCTACAGTCGTTCCGGGAAGATATTTCTTTAAAAAAGGAGGTTTAGGT CGATAGCTGCCGACTGACCGCCGTTGGCGCCTTGAAATGGTATCCTCCGT ACCATAGGTGCCGGAATGCCGTAGTAAGTACTCAACCTCCTGTTCTCTTG TTTCCGAAGTGTTTGTACAAAACCGCGAAGAATGGCGTGGATAAGAACGC AAATCGTAGGATTATTCGAACTGCCTCCTCGCCCCCCTTCCCACCTTTCC CCCTCTTCCCAGGAGTCCATTTGTTTAAGAACATCTGCTATATATAACTG TTACCTGGTACTTCAGTATTAGTTAAGTGTCTCGCGCTTCACTTCCCATC GCCTGTACAAGTACCTACCTGGTACTGTTTTACATGAAAAATGTCGTGTT TTTTGGAGGCCTCACAACGGTGGATGAAACAGAGTTAGGGGTTATCCATA GTATTAGTTTCAAAATATAATGTATGATCGGGTATCTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1290:220722..223959+

>mRNA_F-serratus_M_contig1290.2149.1 ID=mRNA_F-serratus_M_contig1290.2149.1|Name=mRNA_F-serratus_M_contig1290.2149.1|organism=Fucus serratus male|type=CDS|length=2190bp|location=Sequence derived from alignment at F-serratus_M_contig1290:220722..223959+ (Fucus serratus male)
ATGGTGGAGTCAGACGAAGACGGATTCATCCCCGATGGTCGTGATGATAC
TATTATTAATAATACTAATAACACCAACATCGCAAAGAAACGGAATGCTA
GAGTGGACATGGACGAACTCCTAGACTTCATCTTTCCGAAGTCGATGCAG
CATCCTCTCTCCACTGGCAGGCTCTACGCATTCGCCGCATATGGCCCCCT
GGACGAGAACGCAAATGTTCGAGCAGGTCGTGGCGGCATACGGATCGTTA
GCCCTCGGGAAATGGACACGATGTGTTTGCAGTTCGAGCGCGAGGATATT
CTGCAGATGGTGGAGTCAGACGAAGACGGATTCATCCCCGATGGTCGTGA
TGATACTATTATTAATAATACTAATAACACCAACATCGCAAAGAAACGGA
ATGCTAGAGTGGACATGGACGAACTCCTAGACTTCATCTTTCCGAAGTCG
ATGCAGCATCCTCTCTCCACTGGCAGGCTCTACGCATTCGCCGCATATGG
CCCCCTGGACGAGAACGCAAATGTTCGAGCAGGTCGTGGCGGCATACGGA
TCGTTAGCCCTCGGGAAATGGACACGATGTGTTTGCAGTTCGAGCGCGAG
GATATTCTGCAGGTTTATGTCTCAGGCGGGCGTCCGCTGTTTATCCTGAA
CGAAGCCCAGAAGGAAGAAGTCATCGCTCAGGCAGAAAGCCACCTCAAGA
CCGCCAAAGGGCGGGGCTACCGACGGCAAGTAACCCGCGCCGAGGTGGTC
CAACTCTTGTCGGGGCTGCCTCGCGACGAGGCTAGGACGGTGAGCTTCCA
TGACGCACAGAGGGCTATAACGGAGTACCGTAAGCGGCAGATCGCCCGGT
TCAGGGTCATGTTCCCCGATCTTGTCACCTGGGGAGAGGGGGAATCAAGG
TTGTCCTCAGCTAAAGCGTCGAACACTTACGTTTCCCCCTCAAGTAGCTC
GGAGTTGATTTCGCGGGGACCAGGGGCACCAAGACACGGCGGACAATTTA
CGCCTGTGGCAACCGTTACGAAGACGGCGGGTGAGTGCGTCACGGTGCGC
GGAGCCGAGGTGCAATCGGGACGTAAAGACCGTCGTAGTGGAAGAAGCGC
AAAGCTCAGCGCCGATGTTGCGCCAGCGGAGATGTTTTTAAGGGACGTCG
GCTATACCCCCGCCGGGATGGCAAACCACGTTTATGTCTCAGGCGGGCGT
CCGCTGTTTATCCTGAACGAAGCCCAGAAGGAAGAAGTCATCGCTCAGGC
AGAAAGCCACCTCAAGACCGCCAAAGGGCGGGGCTACCGACGGCAAGTAA
CCCGCGCCGAGGTGGTCCAACTCTTGTCGGGGCTGCCTCGCGACGAGGCT
AGGACGGTGAGCTTCCATGACGCACAGAGGGCTATAACGGAGTACCGTAA
GCGGCAGATCGCCCGGTTCAGGGTCATGTTCCCCGATCTTGTCACCTGGG
GAGAGGGGGAATCAAGGTTGTCCTCAGCTAAAGCGTCGAACACTTACGTT
TCCCCCTCAAGTAGCTCGGAGTTGATTTCGCGGGGACCAGGGGCACCAAG
ACACGGCGGACAATTTACGCCTGTGGCAACCGTTACGAAGACGGCGGGTG
AGTGCGTCACGGTGCGCGGAGCCGAGGTGCAATCGGGACGTAAAGACCGT
CGTAGTGGAAGAAGCGCAAAGCTCAGCGCCGATGTTGCGCCAGCGGAGAT
GTTTTTAAGGGACGTCGGCTATACCCCCGCCGGGATGGCAAACCACACGA
ACAAGCTTCTGAGCACCCGCGTGTTTAAGGTGAGCCACATCGCCGATGCG
AACTGTCCAGGCCTCACCGAGAACGTCAGGCTCATCCGCAACGACAAGTC
CCTTGGCCGTCATCCGAGACAGAACCCCTGGGACTCGTACGCCTGCCTCA
GAGGGTATAACGTCGGCGCGCACGTGCGATCGGCGAGAAGCACGACCACG
TCTAAGCGCAAGGCGTAAACGAACAAGCTTCTGAGCACCCGCGTGTTTAA
GGTGAGCCACATCGCCGATGCGAACTGTCCAGGCCTCACCGAGAACGTCA
GGCTCATCCGCAACGACAAGTCCCTTGGCCGTCATCCGAGACAGAACCCC
TGGGACTCGTACGCCTGCCTCAGAGGGTATAACGTCGGCGCGCACGTGCG
ATCGGCGAGAAGCACGACCACGTCTAAGCGCAAGGCGTAA
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