mRNA_F-serratus_M_contig1290.2149.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI) HSP 1 Score: 367 bits (943), Expect = 1.240e-119 Identity = 203/348 (58.33%), Postives = 250/348 (71.84%), Query Frame = 1
Query: 226 NIAKKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVA--TVTKTAGECVTVRGAEVQS-----GRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRNDKSLGRHPRQNP--WDSYACLRGYNVGAHVRSARSTTTSKRKA 1242
N KR+ +V++ ELL+FIFPKS+QHPLSTGRLYAFA YGPLD N+ +R+G G R+VS E+DTMCLQFEREDILQVY+SGGRPLF+LN+AQKEEVIAQA+SHLKTAKGRGYRRQVTR EVV LLS LPR + VSFHDAQ+ I YR++QIARF+V+FP+ + G + A S + + + + G G + +A TV A + E S G +R G AK SA+VAPAEMF++D+G+TPAG+ANHT+KLLSTR +KVS+IAD N PGLT+NV+LIR+D R P Q WD YACLRGYN+G HVRSARS+TT+KRKA
Sbjct: 8 NATGKRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPE-IAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGGGAKRKGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDD----RQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK) HSP 1 Score: 211 bits (536), Expect = 4.170e-59 Identity = 130/337 (38.58%), Postives = 184/337 (54.60%), Query Frame = 1
Query: 235 KKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRN--DKSLGRHPRQNPWDSYACLRGYNVGAHVRSARSTTTSKRK 1239
+K +V ++ L+ F+FP +QHPLSTGRL+AF YGPLDEN+ +R+G G IV E+D MC +FERE ILQVY+ G +L+E++ E VIAQA+ K AKG+ QV+R E L + LPRD +SFHD QR I EYR+++IA +V+FP+L+ P Q V+ + + + +GR+ S + LS VAP EMF + G+T M++ N+LLS F+++ I N LT+NV+L+R + GR WDS +CLRG N+G HV++A+S TT KRK
Sbjct: 36 RKAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDP-------QQAAVSDAGEPGSXXXXFK--LMDAGRQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGRK-----WDSNSCLRGSNIGGHVKTAKSATTVKRK 357
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.900e-58 Identity = 130/324 (40.12%), Postives = 181/324 (55.86%), Query Frame = 1
Query: 277 FIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEAR-TVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRND-KSLGRHPR-QNPWDSYACLRGYNVGAHVRSARSTTTSKRK 1239
F+FP+++QHP+STGRL+AF YGPLD +A +R+G G +V E+DTMC QFEREDILQ+Y+ G+ L E Q EE++AQA+S LK AKG+ +QVT EV + S L D A + FHD Q+ I EYR+ I + +FP++ + + R+ S K+ G +FTP+ + T E GR R R ++ A VAPA MFLRD G +A+ TNKLL + F + +IAD N LT NVRL+R++ K P ++ WD RG +GA V++ +S+TT KRK
Sbjct: 7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTSKAK---RIGSLKS-----------------------GPEFTPIGPLGATYNE--------FGPGRSTGRRTRGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.570e-45 Identity = 110/308 (35.71%), Postives = 162/308 (52.60%), Query Frame = 1
Query: 253 VDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRNDKSLGRHPRQNPWDSYACL 1176
V +D+L+ F+FP + HPLSTGRLYAF YGPLD +R+G G ++ E+D MC QFERED LQVYVS GR L L+E Q+ E+I+QA++ +K+ +G+G Q+++ EV + G+ T+ FH+ Q+ + +R+ +I + RVM+P L++R P GG T + S ++ RR+ +AK+S VAP MF +D G + +A N++L TR +K+ I D N P LT+NV LIR D R + PW +CL
Sbjct: 78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYP-----------------------------LVARKPLRVGFGGSQTASRK--------------SLTSTKRSRRT--TAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDK-DRELGEGPW---SCL 335
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.010e-44 Identity = 121/331 (36.56%), Postives = 153/331 (46.22%), Query Frame = 1
Query: 247 ARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHT--------------------NKLLSTRVFKVSHIADANCPGLTENVRLIRNDKSLGRHPRQN--PWDSYAC 1173
ARV +D+LL FIFP +QHPLS+GRL F YGP N + +G+ G +V E+D+MC +RED+LQVYVS RPL L AQ+EE+IAQ+ Q+TR +V+ L G+PR SFHD Q+ + YR R++A ++M+P L + SP PR Q T T T + RG K S DVAPA MFL+D G MA NKLLST+ FK+S I D N P LT NVRLIR D + H Q WD C
Sbjct: 26 ARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLAAHSK---------------SP-------------PRKRAQSTEKGTATAAQRQSPISRG-------------HKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTT---HQPQGGAQWDETCC 302
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.130e-33 Identity = 91/227 (40.09%), Postives = 123/227 (54.19%), Query Frame = 1
Query: 307 LSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLR 987
+STGRL AF +GPLD A +R+G G +VS E+DTMC QFEREDILQVY+ G+ L E + E++AQA++ +K AKG+ +QVT EV +L + L RDE ++FHD Q+ I ++R+ I +V+FP L T G G+ SP P RHGGQ + S RKDRR S+++S VAP EMFL+
Sbjct: 1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHL-TPGVGK----------PGASP----------PSGERHGGQKSGT-------------------SARKDRRKKTSSRVSESVAPLEMFLK 187
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A6A5AZ06_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZ06_9STRA) HSP 1 Score: 134 bits (337), Expect = 9.500e-32 Identity = 98/307 (31.92%), Postives = 151/307 (49.19%), Query Frame = 1
Query: 247 ARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVY--VSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEART-VSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRND--KSLGRHPRQN 1152
+ V +D L+DF+FP ++QHP STGRL+ F+ YGPLD + +R+G G+ +V+ E++TMC+ EREDIL VY + R + +Q+EEV+ QA+ H+K + + TRA++ ++ +P + +SFH QR I E R R++ M +L T T +P ++S+ + + ATVTK VAP MF++D+G + A +LL+ F++ H+AD N P LT+NVRL+R D L R P N
Sbjct: 28 STVHLDALMDFLFPPNVQHPNSTGRLFVFSLYGPLDAKSRLRSGEKGMHVVTDIELNTMCVSIEREDILSVYGMIGLSRDEILYIPSQEEEVLRQADKHMK------HLPRYTRADIQEMFRHVPHTKNDGFMSFHAMQRRIMEERIRRVL---CMKDNLNT---------------TLATP-----IVSK------YRKSLSTTATVTKY-----------------------------QVAPPSMFVKDMGLNGSENAVVVARLLNCHAFQICHLADGNSPELTQNVRLVREDIASPLPRLPWNN 270
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A8K1CAS7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAS7_PYTOL) HSP 1 Score: 132 bits (333), Expect = 8.520e-30 Identity = 98/302 (32.45%), Postives = 144/302 (47.68%), Query Frame = 1
Query: 232 AKKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEART---VSFHDAQRAITEYRKRQIARFRV-MFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRNDK 1125
K +A VD+D+LL F+FP +QH STGRL+ + YGPL+ A + AG G+ +V+ RE+DTM + ERED+L VY + L++ ++EEVIAQ ++ LK+ R ++ LL +PR + + +SFHD Q AI R R++ + + P L T N Y + E I+ P+H AP MFL DVG T A A +LLS+R F++ H+ +AN P LT+NVRL+R+D+
Sbjct: 196 GSKSDAAVDVDQLLTFLFPPHVQHANSTGRLFVYGLYGPLNAQAQLCAGEKGLHVVTDREVDTMARRMEREDLLAVY-----HMCSLSQHEEEEVIAQIDNALKSFPRHSKR------DIGTLLDKVPRQQTVSGEFLSFHDLQTAILHERMRRVVCMKTRIHPALAT-----------PIQNKYRQTLTRLEQIT-----PKH--------------------------------------------APPSMFLHDVGLTGAENATLVTRLLSSRAFQICHLDNANSPALTQNVRLLRDDR 426
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A5D6Y3J0_9STRA (NDK domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3J0_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.170e-26 Identity = 91/307 (29.64%), Postives = 139/307 (45.28%), Query Frame = 1
Query: 229 IAKKRNARVDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLS---------GLPRDEARTVSFHDAQRAITEYRKRQIARFRVMFPDLVTWGEGESRLSSAKASNTYVSPSSSSELISRGPGAPRHGGQFTPVATVTKTAGECVTVRGAEVQSGRKDRRSGRSAKLSADVAPAEMFLRDVGYTPAGMANHTNKLLSTRVFKVSHIADANCPGLTENVRLIRND 1122
+ R+A VD+++LLDF+FP+ +QHP S GRL+ F YGPLD A +R+G G+ +V+ E+ TM + EREDIL VY + L++ ++E V+ Q + +K+ Y + RA LLS + R +SFH+ Q AI + R R++ + H P+ + T++ R AK + +VAPA FL+D G+T A A +LLS F + H+ D N P LT+NVRL+R++
Sbjct: 200 VKSGRSAEVDLEQLLDFLFPRHLQHPNSAGRLFVFGLYGPLDAKARLRSGEKGLHVVTDLELTTMSKRMEREDILSVY-----KMCSLSQEEEEAVLMQVDQLMKSFPQ--YTPRDIRALFQSLLSRADAELDADNVGHHGTRVLSFHEMQAAIMKERCRRVLCMKEKL----------------------------------------HPALAPPIQNKYRA-----TLK--------------RLAKSADEVAPASFFLKDAGFTGAENATLVARLLSNHSFAICHLDDGNSPSLTQNVRLLRDE 440
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Match: A0A6G0WC23_9STRA (NDK domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC23_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.020e-24 Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 253 VDMDELLDFIFPKSMQHPLSTGRLYAFAAYGPLDENANVRAGRGGIRIVSPREMDTMCLQFEREDILQVYVSGGRPLFILNEAQKEEVIAQAESHLKTAKGRGYRRQVTRAEVVQLLSGLPRDEARTVSFHDAQRAITEYRKRQI 687
V +D L+ F+FP ++QH STGRL+ FA YGPLD + +R+G G+ +V+ E+DTMCL EREDIL VY G L+ A++E+V+ QA+ ++K + TRA++ QL +PR+ +SFHD Q IT+ R R+I
Sbjct: 224 VSLDALMQFLFPPNVQHANSTGRLFVFALYGPLDSKSRLRSGEKGLHVVTDGELDTMCLSMEREDILSVYGMIG-----LSRAEEEQVLGQADQNMKDVP------RYTRADIQQLFRTVPRNANGLMSFHDMQEKITKERLRRI 357 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1290.2149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1290.2149.1 >prot_F-serratus_M_contig1290.2149.1 ID=prot_F-serratus_M_contig1290.2149.1|Name=mRNA_F-serratus_M_contig1290.2149.1|organism=Fucus serratus male|type=polypeptide|length=365bp MVESDEDGFIPDGRDDTIINNTNNTNIAKKRNARVDMDELLDFIFPKSMQback to top mRNA from alignment at F-serratus_M_contig1290:220722..223959+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1290.2149.1 ID=mRNA_F-serratus_M_contig1290.2149.1|Name=mRNA_F-serratus_M_contig1290.2149.1|organism=Fucus serratus male|type=mRNA|length=3238bp|location=Sequence derived from alignment at F-serratus_M_contig1290:220722..223959+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1290:220722..223959+ >mRNA_F-serratus_M_contig1290.2149.1 ID=mRNA_F-serratus_M_contig1290.2149.1|Name=mRNA_F-serratus_M_contig1290.2149.1|organism=Fucus serratus male|type=CDS|length=2190bp|location=Sequence derived from alignment at F-serratus_M_contig1290:220722..223959+ (Fucus serratus male)back to top |