mRNA_F-serratus_M_contig129.2135.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 350 bits (899), Expect = 2.860e-103 Identity = 264/818 (32.27%), Postives = 404/818 (49.39%), Query Frame = 1
Query: 43 PKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILM--EDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPP----------------------ILSSRTRSRRPHTGVEGEALQCY---LPTIEAEEENGAMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQEF---------PGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRF--DVRKEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLF 2358
P+KT + A V DV GPM+ + G Y + F+DD +R V F+KKK++ AD I+ +R+DNGGE+ G F+ L ++ I HE T TPQ NG+AER L E A ++ E +D K WA+A+ + + N+ T T K+PYE+ + K P +L+ FGA GY + K+ K KC F+G R T V +VR+ +E + E+ + + A P ++G T + ++ QHE A + T+ R I+ P + +R + +EG L +P AE A + DEW+KA +E+ ++ N + + +P + IG + ++ K + G+V +YK RLVA+ + Q G+ Y ETYSP SIR +L +A+ ++ D + AFL ++ EIYME+PEE +E V L +++YGL QA R WN ++ ++GF+ ADPCV+ + +GE E +V ++VDD+L ++ A + A + +K ++KDM A + +G I + + R L Q Y ES+ K+F + K TP GV L+KADEPQ E+K +MK+ PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A IK+ +YLL TK+ GI Y G G +EAY+D+D+ D R SV G +LML + + S Q+ A ++EAEY+AL++ VK+ ++
Sbjct: 34 PEKTVKSAGVL-DLIHSDVMGPMQTKTPGDCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVTYTPQQNGLAERMNRSLVEMARCMLYHEGIDK-------KWWAEAVNTSAWIINRIPNTVTV--KTPYEIVYQKKPQLKNLKVFGAHGYGHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRILNVATGQVKIVRTVKFMETTSTGDFMTEVERDDKDEDVAAPHATAPSRGQTQ-----TITIFKDEVVPLQHEVTTETAIVPAPSHSTITRSRTRYIEATTDPEEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQLMAATEEVPKTYAE----ATTRQDQDEWKKAIASELESLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVW 829
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA) HSP 1 Score: 348 bits (892), Expect = 1.840e-102 Identity = 273/837 (32.62%), Postives = 408/837 (48.75%), Query Frame = 1
Query: 43 PKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILM--EDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQALN--VQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPPILSSR--TRSRRPHTG-------VEGEALQCYLPT-------------------IEAEEENGAMESHE--------------WDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPE---EFQEFPGAVGR------LNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRF--DVRKEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLF 2358
P+KT + A V DV GPM+ + GG Y + F+DD +R V F+KKK++ AD I+ +R+DNGGE+ G F+ L ++ I HE T P TPQ NG+AER L E A ++ E +D K WA+A+ + + N+ +T K+PYE+ + K P +L+ FGA+GY + K+ K KC F+G R F T V +VR+ +E + + E+ + + + A P T HG+ + DE VP ++ D + P S TRSR H EG Q P+ + A EE M + E DEW+KA +E+ ++ N + + +P + IG + ++ K + G+V +YK RLVA+ + Q G++Y ETYSP SIR +LA +A+ ++ D + AFL ++EEIYME+ E E E A G L +++YGL QA R WN + ++GF+ DPCV+ + +GE E +V ++VDD+L ++ KA + A + +K ++KDM A + +G I N + R L Q Y ES+ K+ + K TP GV L+KADEPQ E+K +MK PYR VG+LM+ + TRPDI+ AV ++RF ENPG H A IK+ +YLL TK+ GI Y G G +EAY+D+D+ D R SV G +LML + S Q+ A ++EAEY+AL++ VK+ ++
Sbjct: 10 PEKTVKSAGVL-DLIHSDVMGPMQTKTPGGCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKKFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSLVEMARCMLYHEGIDK-------KWWAEAVNTSAWIINR--IPNTVAVKTPYEIVYQKKPQLKNLKVFGALGYEHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRVFNVATGQVKIVRTVKFMETTSTGDFMTEVEGDDKDGDEDVAAPHA------TAPSHGQTQTLTIFNDE--------------------VVPLQHEVTTDTAIVPAPSHSMITRSRTRHIEETTDPKEAEGRKKQIVAPSAIGTKRQKVNQARVKPSDELLAIEEGQLMAATEEVPKTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKDRLVAKGYSQRHGINYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVW 807
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI) HSP 1 Score: 350 bits (898), Expect = 5.980e-101 Identity = 264/842 (31.35%), Postives = 403/842 (47.86%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSAS--LEGPTVPALRKLAIDGNVP------------------------PILSSRTRSRRPHTGVEGEALQCYLPTIEAEEENG--------AMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQEFP--GAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRFDVR--KEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLFFETGAGVHGTV 2391
CE+C + K + T +RAS DV GPMK + GG +Y I F DD +R+ + +K KS++ ++ SI+ +R+D GGE+ E F L I + TPP TPQ+NGV+ER L + +M D +N LW A+ A + NK T + + +PYE+W G+ P H++ +G Y ++ ++ K+ + +KC F+G P+ + V + R +ER+ L G+E L + E+T E + E E + E+ + ++ L+ PT+ A + V PI RS R H + L N AM+ + ++W++A E+E+ M N V+ + KD IG K +YK+KIG DGKVE YK RLVA+ + Q EG+ Y ET+SP SIR LLA A D ++ D + AFL ++ E++YM PE + V +L ++IYGL QA R WN F + F + + +PCV+++ G + +V++VDDIL D M L ++ +KD+ +A Y +G I R+R R L Q +Y++++ KR+++ K P +GV TLS+ D P+ PEE+E M PY AVGA+M+T T TRPD+A A+ +R+ NPG H K V I +YL TK+ + YG L ++ YTD+ F + D S+ G V L G +S S Q A T+EAEY+A +EA K+ ++ + G V
Sbjct: 329 CESCLKGKMTKSPFIG-TGERASELLGLVHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFLYLMKHKSESFEMFKRFRSEVEKQTGNSIKVLRSDRGGEYLSENFIDYLRENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSMMGFTDLPVN-----LWGYALEAAAYLLNKIPTKTVST--TPYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLAEGSHGKEIE------------------LDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQSPTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEDVYMTQPEGYTSMSDHNKVCKLRRSIYGLKQASRSWNIHFNKTIEKFDFVKCEEEPCVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGESE--LKLKGYTDASFASDKDDSKSISGYVFTLNGGTVSWKSSKQATVADSTTEAEYIAASEAAKEAVWMKKFISELGVV 1139
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A6A3JDE6_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JDE6_9STRA) HSP 1 Score: 343 bits (880), Expect = 1.030e-100 Identity = 269/828 (32.49%), Postives = 405/828 (48.91%), Query Frame = 1
Query: 94 DVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILM--EDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQ-SVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQALN--VQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDE-----REQQHEEGGAEARSASL------------------EGPTVPALRKLAIDGNVPPILSSRTRSRRPHTGVEGEALQCY---LPTIEAEEENGAMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPE---EFQEFPGAVGR------LNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRF--DVRKEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLFF-----ETGAGVHGT--VNEDRCG 2409
DV GPM+ + GG Y + F+DD +R V F+KKK++ D L I+ R+DNGGE+ G F+ L ++ I HE T P TPQ NG+AER + E A ++ E +D K WA+A+ + + N+ T T K+PYE+ + K P +L+ FGA+GY + K+ K KC F+G R T V +VR+ +E + + E+ + + + A P T HG+ + DE E E A S S+ EG + AI + +R + +EG L +P AE A + DEW+KA +E+ ++ N + + +P + IG + ++ K + G+V +YK RLVA+ + Q G Y ETYSP SIR +LA +A+ ++ D + AFL ++EEIYME+PE E E A G L +++YGL QA R WN + ++GF+ A+PCV+ + +G+ E +V ++VDD+L ++ KA + A + + ++KD+ A + +G I + + R L Q Y ES+ K+F + K TP V L+KADEPQ E+K +MK PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A IK+ +YLL TK+ I Y G G +EAY+D+D+ D R SV G +LML + S Q+ A ++EAEY+AL++ VK+ ++ E GA G + ED G
Sbjct: 29 DVMGPMQTKTPGGCTYAVTFIDDFSRHVTVYFMKKKTEVLEKFKMFKTDMENATGLKIKRHRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSIVEMARCMLYHEGIDK-------KWWAEAVNTSAWMINRIPNTVTV--KTPYEIVYQKKPQLKNLKVFGALGYGHMPDEKRRKLDAKAFKCRFLGYEDGVKGYRVLNVATGQVKIVRTVKFMETTSTGDFMTEVEGDDKDGDEDVAAPHA------TAPSHGQTQTLTIFNDEVVPLQHEVTTETAIVPAPSHSMITRSRTRPNEETTDPEEAEGRKKQIVAPSAIGTKRQKVSQARVKPSDELLAIEGGQLMAATEEVPKTYAE----ATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGTDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLELAEAEGEDDVDCMLLQSLYGLKQASRVWNETIDKHLNSMGFEPADANPCVYTRG-EGDDECIVCLYVDDMLIASRQKAVIASVKAGIAENFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPSV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVSIVYEGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSMFQKTVALSSTEAEYMALSDCVKECVWIRRLLKEIGAEQVGATVIYEDNQG 834
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048) HSP 1 Score: 348 bits (894), Expect = 1.260e-100 Identity = 264/775 (34.06%), Postives = 401/775 (51.74%), Query Frame = 1
Query: 94 DVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATA--ALLSLVADCITPQKLSIECIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVR-EHKMAPKGEKCVFMGI-PRNFPT---GTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAIPELEGETQGTLSDHG---EDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRRPHTGVEGEALQCYLP-TIEAEEEN--GAMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQ-EFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVF-RKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRFDVR--KEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLFFE 2364
DV GP++ SLGGN Y + F+DD +R V F++ K L ++ + T +KL +C+R+DNGGE+ +F I HE T P TPQ+NGVAER + E+ ++ ++ +P+ W +A+ AC + N+S + + + P +LW GK P+ +HLR FG + YA S K+ + C+F+G F ++RSR++V ++ + ++ + + A E T+ + + ED EV ++E E+G + + + GP+ + DG P I+ RS R YL T + E EN A+ + ++W A + EM + +N Y+ + P+ K + K ++K K KV KYK RLV + F Q +G+ + E +SP SIR +L VA+ + +L D + AFL +DEEIYME PE F+ V +L K++YGL QA R W KF MT+ G+ + AD CV+ +K DG + ++++VDDIL KD +++ EL + +KD+ A+ +G ITR+RK R L Q Y+E + RF++ K P A+ LSK P + EE EM PY AVG+LM+ TRPDIA AV V+RF NPG H +AV I +YL T + + YGG +E YTD+D LD+R S G + A GA+S SR+Q+ A T+EAEY+A AEA K++L+ +
Sbjct: 316 DVCGPLEVESLGGNRYFLTFIDDASRKVWVYFLQTKDQVFDYFKLFHVMVERETGKKL--KCLRSDNGGEYSSKQFDAYCRSYGIRHEKTVPRTPQHNGVAERMNRTIMERVRSML----SMAKLPKP-FWGEAVRAACYLINRSPSVPL-DFEVPEKLWSGKDPSYSHLRVFGCLAYAHVSKELRQKLDARTTPCIFIGYGDEEFGYRLWDPKEKKIIRSRDVVFHESQTIDDIEKPTISQKKNVADQMPEATTEPFMRNGATVPEDIPEV-EDNEESDDAEQGEPQPHLSDVPGPS-----QGQDDGGSPQIIPEVRRSERGRIPSSRYPESEYLLLTEDGEPENFHEAVSHKDKEKWFLAMQDEMESLQKNQTYEIVELPRGKKALKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNF-VALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHF-KLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGG--ADPILEGYTDADMAGDLDSRKSTSGFIFTFAGGAVSWQSRLQKCVALSTTEAEYIAAAEAGKEMLWLK 1072
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1) HSP 1 Score: 343 bits (879), Expect = 7.920e-100 Identity = 260/809 (32.14%), Postives = 403/809 (49.81%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAII-LMEDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRRPHTGVEGEALQCYL-PTIEAEEENGAMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGA--VGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRF--DVRKEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLF---FETGAGV 2379
CE C K + T +RA+ + DV GPM + GG YV+ DD +R+ V +K KS+ + + I+ +R+D GGE+ EF L + I + TPP TPQ NGV+ER R + ++ ++ + ++ ++P W A+ A N++ + S +PYELWFGK P + L+ +G Y ++ ++ K+ PK EKCVF+G P+ + + + ++ + +E++ L+ + G++ E PE G TQ + + T+E +++D+ E + LR+ S+RTRS G L+ L E AM + D+W +A ++E+ M EN V+ P D+ I K ++K+K DG V YK RLVA+ + QV+GV Y ET+SP S+R +LA A D ++ D + AFL + EE+YM PE F + A V +L ++IYGLVQA R WN +F + + A GF Q + CV++KV G + ++++VDDIL D ++ A L + +KD+ +A Y +G I R+R R + Q Y++ + K+F D K+ P GV LS A P E++E+M + PY A+G++M+ TRPD+ AV V R+ NPG H AV I +YL TK+ + YGG L ++ Y D+ F LD S G V +L GA+S S Q V A T EAEY+A +EA ++ ++ F T GV
Sbjct: 143 CEPCLMGKMTKTPFSG-TMERATNLLEIIHTDVCGPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSER-----RNRTLLDMVRSMMSLTDLPLS-FWGYALETATFTLNRAPSKSVET--TPYELWFGKKPKLSFLKVWGCDAYVKK-LQPEKLEPKSEKCVFIGYPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLSKEVSGRKVELDEVLPLEPEN-GATQENVPEVPAPTREEVNDDDHETSDQ--------------VATELRR-----------STRTRSAPEWYG--NPVLEIMLLDNGEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKV-SGSSVAFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMDQSKKGFLPVLQGV-QLSTAQCPTTAEDREKMSVIPYASAIGSIMYAMLCTRPDVNLAVSLVGRYQSNPGKEHWTAVKNILKYLKRTKDMFLVYGGDE-ELVVKGYVDASFDTDLDDSKSQTGYVYILNGGAVSWCSCKQSVVAGSTCEAEYMAASEAAQEAVWMKEFITDLGV 910
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 336 bits (862), Expect = 1.410e-97 Identity = 257/796 (32.29%), Postives = 398/796 (50.00%), Query Frame = 1
Query: 82 RFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLS-IECIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEDLDNVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQ---------------------------EVLSEDEREQQHEEGGAEARSASLEGPTVPALRKL--AIDGNVPPILSSRTRSRRPHTGVEGEALQCYLPTIEAEEENGAMESHEWDEWRKAEETEMLGMVENCVYDQMAR-PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRFDVRKEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGC-GLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLF 2358
R FVD+GG +S+GG +Y +I DD TR + F++ KSDA +A S A+ S IE +R+DNGG F GEF + I E TP +P++NGVAER LGL E A+ I + L + +P+ ++LWA+AM +AC+ N + ++ + KSPYE+W+G++ A PF Y + R K+ PKGE C ++G R+ P VL R+ I E + + + L + Q +P E +G SD + E S D +E + PA R+ +D L+ + R + E +Q P + +E A+ S W KA E+ G++ + A+ P+ VI + ++K K + GK+ K K RLVA+ F Q GV Y ET+SPT +AASIR ++A + +L H D EQAF+++ +D E++M++P G + RLNK++YGL QA R + + D+ IGF+Q +DPCV R ++ E ++ +HVDDIL +A K + LG + K++ + +++GC +R+R+ ++ Q Y+ S+ +RF++ + + PA S A++ ++ E EE P+RE VG LMW A TRP+ + AVR VAR P + KA KI YL T + Y + Y D+DF + R SV GA++++A +S S Q+ + TSEAEY+A+ + VK+ LF
Sbjct: 127 RVFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFHANVRADGIPSLIEIVRSDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRNVTWEALPSQLPPP--QPPLPIEVAEEEGEESDDDVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESMDXXXXXXXXXXXXXXXVEVEA-SPPAARRPQHVVD------LADFNTAARDAVELPKELIQDVEPEPGSYQE--ALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL-YAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALF 900
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 341 bits (875), Expect = 2.970e-97 Identity = 255/809 (31.52%), Postives = 397/809 (49.07%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAII-LMEDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAI-PELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRRPHTGVEGEALQCYLPTIEAEE-ENG-------AMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGA--VGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRFDVRKEAK--TPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLFFE 2364
CE C K + E RAS + DV GPM + GG YV+ DD +R+ + +K KS+ ++ + I+C+R+D GGE+ EF L + I + TPP TPQ NGV+ER R + ++ ++ + ++ ++P W A+ N++ + S +PYELWF K P + L+ +G Y ++ ++ K+ PK EKCVF+G P+ + + ++ + +E++ L+ + G++ E E I P LE E+ T QEV+ P VP + ++ + T R T V P +E +NG AM + ++W +A ++E+ M EN V+ + P ++ I K ++K+K +G V YK RLVA+ F Q++GV Y ET+SP S+R +LA A D ++ D + AFL ++ EE+YM PE F + GA V +L ++IYGLVQA R WN +F + + A GF QV + C+++KV G + +V++VDDIL D ++ A L + +KD+ +A Y +G I R+R R + Q Y++ + K+F++ K P G+ LSK P ++E+M PY AVG+LM+ TRPDI + V R+ NPG H AV I +YL TKE + YGG L ++ Y D+ F D S G V +L GA+S S QEV AA T EAEY+A +EA + ++ +
Sbjct: 471 CEPCLMGKMTKTPFSGIME-RASDLLEIIHTDVCGPMNVEARGGYRYVLTLTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSER-----RNRTLLDMVRSMMSLTDLPLS-FWGYALETTAFTLNRAPSKSVET--TPYELWFSKKPKLSFLKVWGCDAYVKK-LQPEKLEPKAEKCVFIGYPKETIGYTFYLRSEGKTFVAKNGSFLEKEFLSKEVSGRKV---ELDEVITPPLEQESSAT--------QEVV-----------------------PVVPTPTEEEVNDDDHEASDQVTTEPRRSTRVRSAPEWYGNPVMEIMLLDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKV-SGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGFLPVLQGM-RLSKTQSPTTAADREKMSSVPYASAVGSLMYAMLCTRPDINLVISLVGRYQSNPGAEHWTAVKNILKYLKRTKEMFLVYGGDE-ELVVKGYVDASFDTDPDDSKSQTGYVYVLNGGAVSWCSSKQEVVAASTCEAEYIAASEAAHEGIWMK 1232
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A5N6LW24_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LW24_9ASTR) HSP 1 Score: 331 bits (848), Expect = 1.790e-95 Identity = 245/780 (31.41%), Postives = 376/780 (48.21%), Query Frame = 1
Query: 94 DVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAII-LMEDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRN-----FPTGTVSVLLVRSRNIVERQAL---------NVQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSR--RPHTGVEG-EALQCYLPTIEAEEENGAMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQE--FPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRFDVR--KEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLFFE 2364
DV GP + S Y + F+DD +R+ V +K K + + +I+ +R+D GGE+ EF L R I + TPP TPQ NGV+ER R + ++ ++ + N+P W+ A++ A + N + T N K+PYE+WFG P ++LR +G Y + + K+ P+GEK VF+G + + + R + +E++ L N++E+ + P+ + GT D QEV+ A + L ++R+ SSRTR+ R ++G E L P E A+ E +W A +EM M +N V+D + P +G+K ++KRK G V YK RLVA+ F Q +GV Y ET+SP SIR LLA A D ++ D + AFL + E++YM PE F + +P V +LNK+IYGL QA RCWN +F + GF + + +PCV+RK G ++++VDDIL + ++ LG +KD+ +A Y +G I R+R R L Q Y++ M RF++ K+ P G L+K+ P E M+ PY A+G++M+ TRPD++ A+ +RF ++PG AH AV I +YL TKE + +GG L + YTD+ F D S G V L GA+S S Q V A T+E+EY+A ++A K+ + +
Sbjct: 172 DVCGPFRTMSRNHERYFVSFIDDYSRYAYVYLMKHKHETFEKFKEFQNEVENQLGKTIKALRSDRGGEYLSLEFINHLKERGIISQPTPPGTPQLNGVSER-----RNRTLLDMVRSMMCRTNLPHS-FWSFALMTAARIVNLAPTKKVN--KTPYEIWFGTKPNLSYLRVWGCNAYVTRDSND-KLDPRGEKVVFVGYHNKSGYYFYHPDANLISIKRKGHFLEKEFLDRGTGSNIVNLEEIRE-----------PQTTADEVGTS-----DQQEVV---------------ANESDLNT----SIRR-----------SSRTRNAPDRYLGHLDGSEVLLVAEPDNEPTNHKTAISDPESAKWLDAMNSEMQSMRDNQVWDLVELPPGSRAVGSKWIFKRKTDMHGNVHTYKARLVAKGFTQTQGVDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGHLSEDVYMVQPEGFVDPKYPNKVCKLNKSIYGLKQASRCWNLRFDQKIKEFGFIKNEDEPCVYRKA-SGRTISFLILYVDDILIIGNNIPMLNEVKHWLGNCFAMKDLGEAAYILGIKIHRDRSKRLLGMSQSAYIDKMMTRFNMENSKKGTIPMTKGT-VLNKSQSPSTDIEIRRMQAIPYASAIGSIMYAMLCTRPDVSYALSMTSRFQQSPGIAHWTAVKNILKYLRRTKEMFLIFGGVEEELTVRCYTDASFQTDRDDSRSQSGFVFTLNGGAVSWKSSKQSVVADSTTESEYIAASDAAKEAAWIK 894
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI) HSP 1 Score: 332 bits (852), Expect = 9.240e-95 Identity = 249/798 (31.20%), Postives = 388/798 (48.62%), Query Frame = 1
Query: 1 CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKLSIECIRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEDLDNVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPR-NFPT---GTVSVLLVRSRNIVERQALNVQELGQEQHEHEWQEAIPELEGETQGTLSDHGEDTQEVLSEDEREQQHEEGGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRRPHTGVEGEALQCYLPTIEAEEENGAMESHEWDEWRKAEETEMLGMVENCVYDQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTETYSPTPSAASIRTLLATVAAKDGKLRHFDAEQAFLKADIDEEIYMEIPEEFQEFPG--AVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFDQVKADPCVF-RKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKIKLKDMEDAEYYMGCHITRNRKTRELKFDQHLYVESMAKRF--DVRKEAKTPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVIKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRGSV*GAVLMLAKGAISCHSRMQEVTAAGTSEAEYVALAEAVKDVLFFE 2364
C CF K R + + R S DV GP+K +LGG Y + F+DD +R +K K A ++C+R+DNGGE+ G F + I HE T TPQ NGVAER + E+ L+ +PR W +AM A D+ N S + N G P ++W GK + +HLR FG + E K+ PK ++C+F+G +F V +VRSR++V + ++++ + + + +L+ + D E+ Q H++ + +EG P TR ++P E E ++ EW KA + EM + EN YD + PK K ++ K +++RK + ++K RLV + F Q +GV + E +SP +SIRT+L A+ + ++ D + AFL D++EEIYME PE F + V +L K++YGL QA R W KF MT G+ + D CVF +K DG ++++++VDD+L +D + + + +EL + +KD+ A+ +G I RNR + Q YV+ + +RF D K P A G LS + P + EEK EM+ PY A+G+LM+ TRPDIA AV V+RF NPG H AV I +YL T + + +G +G + ++ +TDSD +D+R S G ++ A GA++ SR+Q+ A T+EAE++A+ EA K++L+ +
Sbjct: 323 CVHCFHGKQNRISFRRNIASRKSHVLDLIHSDVCGPLKVRTLGGALYFVTFIDDHSRKVWAYTLKTKDQVLDVFKHFQAKVERETGRQLKCVRSDNGGEYIGPFDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHS----KLPRS-FWGEAMRTAVDLINLSPSVPLN-GDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDERSKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTP---------HDDAAEDDVEPEIEGEQSPQEPLXXXXXX------RSTREKQPSKKYSSNEYVMISDQGEPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGNDQLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNF-IILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLA-GHFKLSSSQCPTSDEEKNEMQKIPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCFG-KGEPI-LDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLK 1095 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig129.2135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig129.2135.1 >prot_F-serratus_M_contig129.2135.1 ID=prot_F-serratus_M_contig129.2135.1|Name=mRNA_F-serratus_M_contig129.2135.1|organism=Fucus serratus male|type=polypeptide|length=708bp MKHSSLGGNNYVIIFVDDCTRFKVVKFVKKKSDATAALLSLVADCITPQKback to top mRNA from alignment at F-serratus_M_contig129:36399..39186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig129.2135.1 ID=mRNA_F-serratus_M_contig129.2135.1|Name=mRNA_F-serratus_M_contig129.2135.1|organism=Fucus serratus male|type=mRNA|length=2788bp|location=Sequence derived from alignment at F-serratus_M_contig129:36399..39186+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig129:36399..39186+ >mRNA_F-serratus_M_contig129.2135.1 ID=mRNA_F-serratus_M_contig129.2135.1|Name=mRNA_F-serratus_M_contig129.2135.1|organism=Fucus serratus male|type=CDS|length=4248bp|location=Sequence derived from alignment at F-serratus_M_contig129:36399..39186+ (Fucus serratus male)back to top |