mRNA_F-serratus_M_contig1286.2120.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: D8LLY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY8_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 6.490e-139 Identity = 208/230 (90.43%), Postives = 218/230 (94.78%), Query Frame = 1
Query: 52 MATDSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSI-EKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 738
MATDS+ELLALQRIDETC+QLQQQG+YLQALECMERGLVLRQHFFGSDSEEVWSACK+VGEMCNLLAMTYLQQEDF MVLELLKKAEILTERD+ GRAVTYNNLACYYRRRG LH+ALQYL KALKIEAKMGSRVEHPADTHLNTCAVLSQIGRH+GALEHAQSALILLQEE+FGG A +G + E D PPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV
Sbjct: 1 MATDSVELLALQRIDETCMQLQQQGDYLQALECMERGLVLRQHFFGSDSEEVWSACKIVGEMCNLLAMTYLQQEDFGMVLELLKKAEILTERDDAGRAVTYNNLACYYRRRGKLHSALQYLHKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHQGALEHAQSALILLQEELFGGGATVGDAGGEGGDQPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEV 230
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A7S3YLC4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLC4_HETAK) HSP 1 Score: 383 bits (983), Expect = 2.920e-127 Identity = 194/256 (75.78%), Postives = 221/256 (86.33%), Query Frame = 1
Query: 61 DSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARD 828
D+ ELLALQRIDETC+QLQQQG YL+ALECMERGLVLRQHFFG++SEEVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD+ G+AVTYNNLACYYRR+G LH+ALQYL+KALKIE+KM VE+PADTHLNTCAVLSQ+GRH ALEHAQS++ILLQEE+F G D PR DR+AVL IAYHN+GVEQEFLKK+E S+ SYRKGVEV + +LG HA+T+TLRNS +AARRA+ ARD
Sbjct: 63 DNAELLALQRIDETCMQLQQQGNYLEALECMERGLVLRQHFFGAESEEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDQKGKAVTYNNLACYYRRQGKLHSALQYLQKALKIESKMKD-VENPADTHLNTCAVLSQLGRHTSALEHAQSSMILLQEELFQG-----------DGDPRPDRVAVLGIAYHNIGVEQEFLKKYEQSIASYRKGVEVVERFLGPRHAITVTLRNSLVAARRAVGARD 306
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A7S2CPG4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPG4_9STRA) HSP 1 Score: 378 bits (971), Expect = 8.550e-126 Identity = 195/260 (75.00%), Postives = 227/260 (87.31%), Query Frame = 1
Query: 61 DSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 840
++ ELLALQRIDETC QLQ QG YL+ALECMERGLVLRQHFFG+DS+EVW ACKVVGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD GRAVT+NNLACYYRR+G LHAALQYL+KALKIE K+ +V++PADT+LNTCAVLSQ+GRH+ ALEHAQ ALILLQEE+ +++ G + + P+ADRIAVLAIAYHN+GVE EFLKKF+ SLQSYRKGVEV++ +LG +HA+T+TLRNS IAARRAI RD + R
Sbjct: 7 NNAELLALQRIDETCKQLQTQGNYLEALECMERGLVLRQHFFGADSDEVWRACKVVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDNAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIENKL-DQVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEEL----SRVLGPMADGNEAPKADRIAVLAIAYHNVGVEYEFLKKFDQSLQSYRKGVEVSERFLGPDHAITVTLRNSCIAARRAIMVRDPQAR 261
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A7S2RTK0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTK0_9STRA) HSP 1 Score: 378 bits (971), Expect = 1.250e-125 Identity = 196/257 (76.26%), Postives = 223/257 (86.77%), Query Frame = 1
Query: 70 ELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 840
ELLALQRIDETC +LQQQG YL+ALECMERGLVLRQHFFG++S+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD GRAVT+NNLACYYRR+G LH+ALQYL+ ALKIEAK+ +RV++PADT+LNTCAVLSQ+GRH+ ALEHAQ ALILLQEE+ V M E P+ADRIAVLAI+YHN+GVE EFLKKF+ SLQSYRKGVEVA+ +LG HA+TITLRNS IAA+RAI ARD +R
Sbjct: 18 ELLALQRIDETCRKLQQQGNYLEALECMERGLVLRQHFFGAESDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHSALQYLQNALKIEAKL-ARVDNPADTYLNTCAVLSQLGRHQSALEHAQQALILLQEELSRVVGPMADGKEA----PKADRIAVLAISYHNVGVEYEFLKKFDQSLQSYRKGVEVAERFLGSEHAITITLRNSCIAAKRAIMARDPHVR 269
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A836CET2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET2_9STRA) HSP 1 Score: 372 bits (956), Expect = 1.120e-123 Identity = 189/241 (78.42%), Postives = 212/241 (87.97%), Query Frame = 1
Query: 49 VMATDSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGS---------IEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQ 744
+ A DS ELLALQRIDETC+QLQQQG YL+ALECMERGLVLRQHFFGSDS+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD +G+AVT NNLACYYRR+G LHAALQYL++ALKIEA++GSRV+ PADTHLNTCAVLSQ+GRH+GAL+HAQSALILLQEE+FGG ++ S + PRADR+AVLAIAYHNMGVEQEFLK+F+HSLQSYRKGVEVAQ
Sbjct: 1 MQAADSAELLALQRIDETCMQLQQQGNYLEALECMERGLVLRQHFFGSDSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDAVGKAVTLNNLACYYRRQGKLHAALQYLQRALKIEARLGSRVQTPADTHLNTCAVLSQLGRHQGALDHAQSALILLQEELFGGGSRALPSSCAGDGELGLGLSQASPRADRVAVLAIAYHNMGVEQEFLKRFDHSLQSYRKGVEVAQ 241
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A7S4A6K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6K0_9STRA) HSP 1 Score: 371 bits (953), Expect = 3.900e-123 Identity = 191/260 (73.46%), Postives = 218/260 (83.85%), Query Frame = 1
Query: 61 DSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSKIR 840
D+ ELLALQRIDETC QQ G+YL+ALECMERGLVLRQHFFG+ S+EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTERD GRAVT+NNLACYYRR+G LHAALQYL+KALKIE ++ S V++PADT+LN CAVLSQ+GRH+ ALEHAQ ALILLQEE+ + PP+ADR+AVLAIAYHN+GVEQEFLKK SLQSYRKGVEVA+ YLGG+HA+T TLRNS +AARR + ARD + R
Sbjct: 15 DNAELLALQRIDETCTNFQQNGQYLEALECMERGLVLRQHFFGAGSDEVWRACKTVGEMCNLLAMTYLQQEDFAMVLELLKKAEILTERDPAGRAVTFNNLACYYRRQGKLHAALQYLQKALKIEGRLES-VDNPADTYLNACAVLSQLGRHQSALEHAQQALILLQEELSSVLGSDNAG------PPKADRVAVLAIAYHNVGVEQEFLKKHNQSLQSYRKGVEVAERYLGGDHAITSTLRNSCVAARRTMLARDPQAR 267
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A7S1XJL3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJL3_9STRA) HSP 1 Score: 370 bits (951), Expect = 3.290e-120 Identity = 195/279 (69.89%), Postives = 232/279 (83.15%), Query Frame = 1
Query: 34 FPH--RSVM------ATDSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGV---AKMGGSIEKKDHP-PRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSK 834
+PH RS M + ++ ELLALQRIDETC+QLQQ G YL+ALECMERGLVLRQHFFGSDS EVWSAC+ VGEMCNLLAMTYLQQ+D++MVLELLKKAEILTERD+ GRAVT+NN ACYYRR+G LHAALQ+L+KAL+IE+++ V + ADT+LNTCAVLSQ+GRH+ ALEHAQ+ALILLQEE+F G+ A MGG P P DRIAVLAIAYHN+GVEQEFLKKFE SL SYRKG++VA+ +LGG+HA+ +TLRNS AARRA +++D K
Sbjct: 97 YPHPLRSTMDDAGESSNETAELLALQRIDETCVQLQQSGNYLEALECMERGLVLRQHFFGSDSNEVWSACRTVGEMCNLLAMTYLQQQDYAMVLELLKKAEILTERDDKGRAVTFNNFACYYRRQGKLHAALQFLQKALRIESRLVD-VPNAADTYLNTCAVLSQLGRHQSALEHAQNALILLQEELFHGIEGGAGMGGEEAGLAPPNPPKDRIAVLAIAYHNIGVEQEFLKKFEMSLTSYRKGIQVAERFLGGDHAIALTLRNSLTAARRAFASKDPK 374
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A7S3HH21_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH21_9STRA) HSP 1 Score: 354 bits (909), Expect = 3.180e-116 Identity = 177/251 (70.52%), Postives = 214/251 (85.26%), Query Frame = 1
Query: 70 ELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISA 822
E+LALQR+DET QLQ+QG YL+ALECMERGLVLRQHFFG+DS EVW ACK VGEMCNLLAMTYLQQEDF+MVLELLKKAEILTE+DE GRA T+NNLACYYRR+G LHAALQYL+KALKIE+ + + V++PADTH+N CAVLSQ+GRH+ AL+HAQ+A+ILLQEE+ +G + PP+ADRIAVLAIAYHN+GVEQEFLK++E S+ SY+KGVEVA+ YLG HA+ +TL NS +AA++ +A
Sbjct: 6 EVLALQRLDETSAQLQKQGNYLEALECMERGLVLRQHFFGADSPEVWKACKTVGEMCNLLAMTYLQQEDFNMVLELLKKAEILTEKDEAGRAATFNNLACYYRRQGKLHAALQYLQKALKIESGL-TNVQNPADTHINACAVLSQLGRHQTALDHAQNAIILLQEELLSPPGVVGAA------PPQADRIAVLAIAYHNIGVEQEFLKRYEQSVLSYKKGVEVAERYLGAKHAICVTLNNSLVAAKKQAAA 249
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A2R5G2B1_9STRA (Clustered mitochondria protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2B1_9STRA) HSP 1 Score: 348 bits (894), Expect = 7.270e-105 Identity = 177/253 (69.96%), Postives = 209/253 (82.61%), Query Frame = 1
Query: 55 ATDSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVAKMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRA 813
A + ELLAL RIDET +LQQQG+YL+ALECMERGLVLRQHFFG S+EVW+ACK VG+MCNLLAMTYLQQE+FSMVLELLKKAEILTERDE GRAVTYNNLACY+RR G LHAALQYL+KALK+E+++ V + ADTHLN CAVLSQ+GRH GALEHAQ+ALI LQEE+F G DRIAVLAIAYHN+GVEQEFLK+FE ++ SYRKGV++++ +LG +H +T+TLRNS +AAR+A
Sbjct: 440 AEANAELLALHRIDETSTRLQQQGKYLEALECMERGLVLRQHFFGPSSDEVWAACKTVGQMCNLLAMTYLQQEEFSMVLELLKKAEILTERDEHGRAVTYNNLACYFRRTGKLHAALQYLQKALKVESRL-ENVTNRADTHLNLCAVLSQLGRHAGALEHAQAALIQLQEELFPGALSASAKSSSSAALASTDRIAVLAIAYHNIGVEQEFLKRFEMAIDSYRKGVDISETHLGTDHGITVTLRNSYLAARQA 691
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Match: A0A024U4G6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4G6_9STRA) HSP 1 Score: 317 bits (813), Expect = 1.040e-101 Identity = 171/263 (65.02%), Postives = 200/263 (76.05%), Query Frame = 1
Query: 55 ATDSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEEVWSACKVVGEMCNLLAMTYLQQEDFSMVLELLKKAEILTERDEIGRAVTYNNLACYYRRRGTLHAALQYLEKALKIEAKMGSRVEHPADTHLNTCAVLSQIGRHRGALEHAQSALILLQEEIFGGVA---KMGGSIEKKDHPPRADRIAVLAIAYHNMGVEQEFLKKFEHSLQSYRKGVEVAQMYLGGNHAVTITLRNSTIAARRAISARDSK 834
A + EL ALQR+D C +LQQ+G+Y +ALECME+GLVLRQHFFGSDS EV ACK VG+MCNLLAMTYLQQE+F +VLELLKKAEILTER GRAVT NN ACYYRR+G LH AL +L +AL IEAK+ V + ADTHLN CAVLSQ+GRH+GALE AQ+ALILL EE+F + G + D + DRIAVL IAYHN+GVEQEFLKK E S+ SYRKG EVA YLG +H + ITLRNS + A RA+ AR S+
Sbjct: 27 AVEDQELYALQRLDTKCTELQQEGKYTEALECMEKGLVLRQHFFGSDSPEVRDACKTVGDMCNLLAMTYLQQENFPIVLELLKKAEILTERHPAGRAVTLNNFACYYRRQGNLHKALTHLTEALAIEAKL-EHVPNRADTHLNMCAVLSQLGRHQGALEQAQAALILLHEELFSAPTPGNQHGSPVA--DASVKLDRIAVLGIAYHNVGVEQEFLKKLELSIHSYRKGAEVAAKYLGESHGMVITLRNSLVTATRALEARASR 286 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1286.2120.1 >prot_F-serratus_M_contig1286.2120.1 ID=prot_F-serratus_M_contig1286.2120.1|Name=mRNA_F-serratus_M_contig1286.2120.1|organism=Fucus serratus male|type=polypeptide|length=374bp MATDSIELLALQRIDETCIQLQQQGEYLQALECMERGLVLRQHFFGSDSEback to top mRNA from alignment at F-serratus_M_contig1286:208487..219061- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1286.2120.1 ID=mRNA_F-serratus_M_contig1286.2120.1|Name=mRNA_F-serratus_M_contig1286.2120.1|organism=Fucus serratus male|type=mRNA|length=10575bp|location=Sequence derived from alignment at F-serratus_M_contig1286:208487..219061- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1286:208487..219061- >mRNA_F-serratus_M_contig1286.2120.1 ID=mRNA_F-serratus_M_contig1286.2120.1|Name=mRNA_F-serratus_M_contig1286.2120.1|organism=Fucus serratus male|type=CDS|length=2244bp|location=Sequence derived from alignment at F-serratus_M_contig1286:208487..219061- (Fucus serratus male)back to top |