mRNA_F-serratus_M_contig1286.2119.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: D7G104_ECTSI (Alpha-1,2-fucosyltransferase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G104_ECTSI) HSP 1 Score: 379 bits (973), Expect = 6.950e-123 Identity = 185/285 (64.91%), Postives = 220/285 (77.19%), Query Frame = 3
Query: 555 RGPGLVELTFMGRLGNNLFEYATARVVADKLGWALSLK-ALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDR----PETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDANGLVVRP 1394
RGPG+V L FMGRLGNNLFEYA AR +AD+LG+ALS++ A N+++F L +PEG ACFPGVRP+GP SS EM LE V+FRG++RE+ DPTPR I M+ WFQ+Y +F SEKDRLR+I+ALDPSCCGPTAPGP D+VIH+RNY+AEL EQYEKL F+DLD+ FY+ VL+ + PETVWVVGEF+ PL KRLQ++H NVK AEMV DQF AFCFLSRAPR +MA STFSWW AFLG TEVHFP + VTG I VD+ RY+YRD G VV P
Sbjct: 95 RGPGIVRLNFMGRLGNNLFEYAAARALADRLGFALSIQPAPYNRKKFGLLTRPEGMACFPGVRPVGPARSSPEMVGLETVKFRGVRRELGDPTPRSIEMEGWFQDYSMFKSEKDRLRKIMALDPSCCGPTAPGPGDLVIHHRNYRAELTAEQYEKLIFKDLDYEFYEAVLRDAAESAAGPPETVWVVGEFNDEEPLFKRLQQDHPNVKRAEMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTRQNQGVTGPSIAVDEG-RYVYRDEAGRVVPP 378
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: D7G107_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G107_ECTSI) HSP 1 Score: 285 bits (730), Expect = 4.780e-89 Identity = 137/212 (64.62%), Postives = 161/212 (75.94%), Query Frame = 3
Query: 771 MAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDR----PETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVDDDPRYIYRDANGLVVRP 1394
M LE V+FRG+++E+ DPTPR I M+ WFQ+Y +F SEKDRLR+I+ALDPSCCGPTAPGP D+VIH+RNY+AEL EQYEKL F+DLD+ FY+ VL+ + PETVWVVGEF+ PL KRLQ++H NVK AEMV DQF AFCFLSRAPR +MA STFSWW AFLG TEVHFP K VTG I VD+ RY+YRD G VV P
Sbjct: 1 MVGLETVKFRGVRQELGDPTPRSIEMEGWFQDYSMFKSEKDRLRKIMALDPSCCGPTAPGPGDLVIHHRNYRAELTAEQYEKLIFKDLDYEFYEAVLRDAAESAAGPPETVWVVGEFNDEEPLFKRLQQDHPNVKRAEMVEDQFHAFCFLSRAPRLVMAHSTFSWWVAFLGVGTEVHFPLTKQNKGVTGPSIAVDEG-RYVYRDEAGRVVPP 211
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: F2TVY1_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TVY1_SALR5) HSP 1 Score: 116 bits (291), Expect = 8.250e-24 Identity = 84/285 (29.47%), Postives = 142/285 (49.82%), Query Frame = 3
Query: 564 GLVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERF-KTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDW-FQEYRVFASEKDRLRQI-LALDPSCCGPTA-----PGPNDMVIHYRNYKA-ELDKEQYEKLH-FQDLDFNFYDTVLKSTQDRP--ETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRA---FCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIVVD-DDPRYIYRD 1370
G+V + G+ GN L EY AR+VA+ W L + + +E F K L+ P F P+ + + DPTPR I + + F+ Y + A K ++ L +D SC + PGP D+V+H R Y E ++ +Y+ F DL +++YD +L+ Q + +TVW+ +++P+ ++L ++G I + + + + F+ A R +M+QST++WWAA+LG+A EVH+P RH + D+PRY++ D
Sbjct: 229 GVVLMHCHGQFGNRLGEYTIARIVAETRRWPLVMCDVFKQELFSKGLIFP-----FAVDHPIDLAAFDQLPVDTQAGHNYDFDELLRDPTPRVIDLAGFPFRNYSILAQHKAAIKDDWLRIDTSCLAAQSLPLSLPGPRDIVVHLRAYHGCEGEEHEYDPTEAFVDLPWDYYDRILQRYQRKGGWDTVWLASRCGEHHPIAQQLMTKYGARVIQGDGSKNWASMHDWLFMRSARRLVMSQSTYAWWAAWLGDAEEVHYPLAGDWWGKGPRHTLYPVDEPRYVFHD 508
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A349D2R7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peribacteria bacterium TaxID=2053688 RepID=A0A349D2R7_9BACT) HSP 1 Score: 105 bits (262), Expect = 2.110e-21 Identity = 80/268 (29.85%), Postives = 132/268 (49.25%), Query Frame = 3
Query: 567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRHIV--VDDDPRYIY 1364
++E+ + G LGN LF+Y ARV+A +LG+AL K + T + +GK FPG + + + +V + +AD RKI ++ FQ Y + S ++++R + P+C P P +V+H R + Y ++ L F+FY VLK D V + +P ++ + +K +++ D FCFL A + ++QST+SWWAA+L +ATE++FP T + R + D+PRY Y
Sbjct: 1 MIEVHYSGGLGNVLFQYCFARVLAGQLGYALEAKPVPGFPH--TADRIDGKR-FPG--------GAIVVLEGHKVDLPAI---LADTRDRKIIVKGCFQRYEYYHSFREQIRTWM--QPACSAAAKPDPRALVMHVR-------RGDYLRVEGYPLPFSFYKDVLKRA-DFDHLVICTDD--PRDPFFRKFRHHDPEIKSGDLLED----FCFLKSAKKIALSQSTYSWWAAYLSDATEIYFPRSLTGPFSSSRPDIDLEVDEPRYRY 238
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A2H0RNU4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_55_24 TaxID=1974791 RepID=A0A2H0RNU4_9BACT) HSP 1 Score: 97.1 bits (240), Expect = 1.390e-18 Identity = 74/283 (26.15%), Postives = 126/283 (44.52%), Query Frame = 3
Query: 567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLN----KERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVG-------EFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFP------FQPTRKAVTGRHIVVDDDPRYIY 1364
++E+ ++G++GN LF+Y R++A++LG+AL + L ++R P+G S + L + +AD PR I ++ FQ Y + +D +R L P+C G A ND+V+ R ++ Y + L F++Y+ VL Q + G F ++NP+++R FC + A + ++QS+FSWWAAFL +A ++FP F P R + + D+PRY+Y
Sbjct: 1 MIEVHYLGKIGNFLFQYCFGRLLAEQLGYALRAEPLPGFPGTQQRIDGQSYPDGDTLV----------LSGNVVDLPAL--------LADTRPRHIILKGAFQRYEYYRPHRDAIRTWL--QPACTGMPAASANDLVMQVR-------RDDYLRAVGYPLPFSYYEQVLTQAQYDRLVICTDGPTDPFLRRFRRFNPVIER--------------RGVMEDFCLMHSARQIAISQSSFSWWAAFLSHAETIYFPRSLTGPFSPERPDID----LEVDEPRYVY 238
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: UPI00114CC053 (hypothetical protein n=2 Tax=Candidatus Thiosymbion oneisti TaxID=589554 RepID=UPI00114CC053) HSP 1 Score: 89.0 bits (219), Expect = 1.070e-14 Identity = 83/282 (29.43%), Postives = 124/282 (43.97%), Query Frame = 3
Query: 567 LVELTFMGRLGNNLFEYATARVVADKLGWAL-----SLKALLNKERFKTLLKP--EGKACFPGVRPLGPPPSSAEMAKLEEVRFR----GLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRH-----IVVDDDPRYIY 1364
+++L G +GNNLF+YA AR++A+ LG+AL S K N + + LL + G R P +A M FR G++ D RKI ++ +F+ Y +F + K R+R A+DP G P+D+VIH R + + +FY +L+ + G + VK + G + I D FR F+ R I +QSTF+WWA FL A E+H P P R + V+D+ RY Y
Sbjct: 1 MIQLRMQGLIGNNLFQYAFARILAEDLGYALEVKHSSYKPGKNIPQLEDLLSHFRDAPLAIDGKRFSRPVDRTALMGHNGFDGFRIDLEGMRNCRQD---RKILIKGFFERYEIFRTHKSRIRSWFAVDPIDLGYHI-APDDIVIHIRRGDFIVFSRA--------ISLSFYLDLLEKLDFARLYICGFG----LDEEVKASFSKFGPIYIEGSPIDDFR---FMIGFNRIIQSQSTFAWWAGFLSKAEEIHAPVPPVNATPFERRYPHIDLRVNDESRYHY 263
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: UPI000E65365C (hypothetical protein n=2 Tax=Calidifontimicrobium TaxID=2828371 RepID=UPI000E65365C) HSP 1 Score: 82.8 bits (203), Expect = 3.140e-13 Identity = 87/291 (29.90%), Postives = 125/291 (42.96%), Query Frame = 3
Query: 570 VELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGK-----------ACFPGVRP---LGPPPSSAEMAKLEEVRFRGLQRE--MADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVT-GRHIVVDDDPRYIYRDANGLVVR 1391
VEL F+G LGNNLF+YA ARV+A++LG AL + + F+ + + G A P RP + P M + + G+ + R+I ++ +FQ +DR+R+ L P A GP D+VIH R LD KL + L+ +FY L+S P TV V G L L + D L+ A R ++A STFSWW A+L +V P +P R + R V + P Y +G+ VR
Sbjct: 3 VELHFVGHLGNNLFQYALARVLAEELGLALQCRPARERPGFEAVERASGIVDRLDQWHHRFADVPLQRPGREIDHPQWRQVMGEQDGWHGHGVDLPFLLRSGRERRIVLRGYFQRTEYVHPWRDRVRRWYRLPPPAPA-FAAGPRDVVIHVRQ---SLDM----KLLGRALEPSFYARALESMTPAPRTVHVCGLGLDDPALTAALAPWRPR----RLDLDAVGTLAVLAHARRIVLANSTFSWWGAYLATEAQVIHP-RPVRGYWSLDRPEVALEVPEDRYTVVDGVPVR 280
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A7R9SV16_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SV16_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 3.550e-12 Identity = 86/315 (27.30%), Postives = 134/315 (42.54%), Query Frame = 3
Query: 564 GLVELTFMGRLGNNLFEYATARVVADKLGWAL-SLKALLNKE---------------------RFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQR---------EMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYR--NYKAELDKE-----QYEKLHFQ-DLDFNFYDTVLKSTQDRPETVWVVGEFHKYN-PLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPF------QPTRKAVTGRHIVVDDDPRYIYRD 1370
G+V L + GR GNNLF+YA AR++ +LG+ + +++A + R +T L + P V +A+M L E + ++ P R + WF R AS + +R++ APG D+V+H R + + LD+ + EKL +Y VL Q V ++ E N PLV L +E +A D F +L A + +M+ S+F+WW A L NATE+H+P Q R+ +++DD+PRYIY D
Sbjct: 133 GVVSLDYNGRFGNNLFQYAFARILNLELGFEVQTVQAHAGRSNLYEASRIMHERSVVPESVPARTRTKLSDDFMEDQPNVVVRSNKFGNADMCSLIETCRPAIVHIIDAFLHDYQLFKPYKRLLRCH-WFNFPRFEASNSETVRRV----------GAPGAEDVVVHVRLGDLETRLDRSFEESGKNEKLFLHIPAPLAYYKQVLSGIQF--SRVLLLVEPQSVNHPLVLDLVKEFDAKVLASQ--DFLLDFWYLLEAKKIVMSPSSFAWWGALLSNATEIHYPLIGYYHHQNVRRV----KLIIDDEPRYIYHD 428
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A7C7C2S9_9FLAO (Alpha-1,2-fucosyltransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7C2S9_9FLAO) HSP 1 Score: 66.6 bits (161), Expect = 1.540e-8 Identity = 62/270 (22.96%), Postives = 124/270 (45.93%), Query Frame = 3
Query: 567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYR--NYKAELDKEQYE---KLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFPFQPTRKAVTGRH-IVVDDDPRY 1358
++++ ++GR+GNN+F+Y+ R++A++LG L + PE +A + V ++ ++ +++ + + + + + + +FQ+Y ++ K+RLRQ P A D+VIH R +Y + L + + + ++ + + T D + + F K NP + +GNV + F +L+ A + I+++S+FS+W FL A E++ P GR + VDD+ RY
Sbjct: 1 MIKVNYIGRMGNNMFQYSFGRILAEELGMHLVSNPI-----------PEFRATYQSVPGKS---NNTDVLIVDDSNCKDILDKKESLVDKSLLLNGFFQQYTLYKPYKERLRQWFK--PKKMIEKAKEA-DIVIHIRLGDYMSTLIPSHWALPAEYYLSCIEMSSAKNIHIVTDDPNHSF--LNNFSKLNPKII-----NGNV---------IQDFTYLTSAKKIILSRSSFSFWVGFLSEAEEIYSPNPDKGLWADGRQDLFVDDEERY 237
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Match: A0A7K4H580_9ARCH (Alpha-1,2-fucosyltransferase n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A7K4H580_9ARCH) HSP 1 Score: 65.9 bits (159), Expect = 2.530e-8 Identity = 66/269 (24.54%), Postives = 113/269 (42.01%), Query Frame = 3
Query: 567 LVELTFMGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGVRPLGPPPSSAEMAKLEEVRFRGLQREMADPTPRKIHMQDWFQEYRVFASEKDRLRQILALDPSCCGPTAPGPNDMVIHYRNYKAELDKEQYEKLHFQDLDFNFYDTVLKSTQDRPETVWVVGEFHKYNPLVKRLQEEHGNVKIAEMVTDQFRAFCFLSRAPRFIMAQSTFSWWAAFLGNATEVHFP----FQPTRKAVTGRHIVVDDDPRYI 1361
++ +T G LGNN+++YA AR++A+K L+ ++ ++ GK R + S + + KI M +FQ Y K+ +++ LD + P ND+V+ R Y + ++ F + + K DR + F +P K L++ NV++ + F + ++ + + STF WWAAFL NA+E+++P F PT V VDD+ RYI
Sbjct: 1 MITVTKNGTLGNNMWQYAVARIIAEKNNLKLNCFSIPGFHNTNNVVT--GKIINSPTRQI-----SGHRFDMNSIGSNT-----------KIIMNGFFQRYEYIKEYKNEVKEWFKLDINT--PFEVNKNDLVVSIRR-----GWNGYPVYYCPPQEY-FIENLNKIDCDR--IILCTDTFE--DPFFKFLEKL--NVEVIKANYSPLEQFSLIQKSNKIFLTSSTFCWWAAFLSNASEIYYPWINNFIPTENGVNW---YVDDEDRYI 234 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1286.2119.1 >prot_F-serratus_M_contig1286.2119.1 ID=prot_F-serratus_M_contig1286.2119.1|Name=mRNA_F-serratus_M_contig1286.2119.1|organism=Fucus serratus male|type=polypeptide|length=273bp MGRLGNNLFEYATARVVADKLGWALSLKALLNKERFKTLLKPEGKACFPGback to top mRNA from alignment at F-serratus_M_contig1286:205553..208719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1286.2119.1 ID=mRNA_F-serratus_M_contig1286.2119.1|Name=mRNA_F-serratus_M_contig1286.2119.1|organism=Fucus serratus male|type=mRNA|length=3167bp|location=Sequence derived from alignment at F-serratus_M_contig1286:205553..208719+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1286:205553..208719+ >mRNA_F-serratus_M_contig1286.2119.1 ID=mRNA_F-serratus_M_contig1286.2119.1|Name=mRNA_F-serratus_M_contig1286.2119.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig1286:205553..208719+ (Fucus serratus male)back to top |