mRNA_F-serratus_M_contig1286.2107.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE) HSP 1 Score: 805 bits (2078), Expect = 1.760e-265 Identity = 607/1327 (45.74%), Postives = 702/1327 (52.90%), Query Frame = 1
Query: 1 MSGLIEQLSTLRAVVPDGDEKQLQLLLRTANYNVQRAINH---------------------------------------YFDSGLPVPXXXXXXXXXXXXXXXXXXXXXPADAA-GFGVDSNSLVPIAPPPSKRVPLALVRSATESPRRL------------KEPGWPKLIGERLVTGYSTRRGSIEHREHVAIISEGSGISS-----TRGRGGTSGGKXXXXXXXXXXX------------------FGRNKVSSAGAMAHILFRSSKSGVEGRLPREVCTFLAPLLQRGLARAHAEAVCDLPGLGVFAEVPLTLAIEIEEGIFALDPDEELYRSAYALLEFAHTGQIEQEQPRRANQASAAAAADGVKNEGQEGASGDIQDREGESEKQ-----VRDEDVRHLYDDEAQLCSMPEAPDPRLFAEGLTLRRYQRQALAWMVQREKRRCVTEEDCTALSLGGSSAHTAEIPKGAQSGGEEG----VVLRDGCVHVAYWQSAAA----RGDGVEKAG---VAMHPLWERRAAAFLGLKVSPGPPSVLGLSIAKKAGHESLAPRDGESCGGEA-----TLSHPVPYYTNVYTKRFQREFPRASLGCRGGILADEMGMGKTVMLLSLILTDKERRQRDGSSEEG-----DTVLNESGARPVKAAGKDGDRGPIYPVEGEGTDSGSLLAPGGDSNGVFPAKRGVVNSEHFRTRGPDIAATKRRRLDESKRGGSSGGDFARVGGKAAVVVRAGVQPGESHDVEGAEGGRSAGRRPALDTRSSQVAVSGGANEGEDEKDPDFEPFPSPRP-------------PSKTTGKTRTAAKREGV-----GGAGTRGKSDAANPSHGGRREGGRVGSNHSVLRKDSYDARTDEEAVVEGEGTGDRSVVANLLGGRSAGGPTDGDVHAEGTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRS--ARDLCRFDVVLTTYGVISSE-MAKHEGDVQAGSRAAVGGRAA------------------------AGFP------LRKRRQKA--GLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQA---------------CNHPFLVLGAG-GRAGGAAAVAEPQRRHPVSNNPSSFSCSLSSVSSARTNDDLTADHDRVETL------EGGNDAGKSPPSYVEELYRRYERRVA 3453
MSGLIEQL TLRAV DGDE+QLQLLLRTA YNV+RAIN YF+SGLP P PA G +NS P K A+ RS RL KE GWPKL+G+R VTGY+ +GS+++RE V IISEGSG+SS +G+G G XXXXXXXXXXX FGR K SSAGAM++ILFR S VEGRLPREVC FLAPLLQ GLA+AHAEAVCDLPGLG FAEVPL L+IEIEEG+FALDPDEELYRSAY LL+FAHTG IEQEQP ++ QA+AAAA G + Q + ++R VR+ED++ LY+DE QLC MPEA DPRLF +GL LRRYQRQALAWM+QREK+R VTEEDCT LS ++ V +RDG V VA W A++ +G + G VAMHPLWERRAAA + V S L + +G + D G E LS P ++ NVY++RFQREFP ASLGCRGGILADEMGMGKTVMLLSLIL+DKER G E G + G + + S A D NG G + P+ A D G + + V V G + LD S +++GE DF P P+ GK+R A G G G R ++ S GGR GG+ G + S L D Y AV E G V + GR AG GTLVVCPLS+IGQWR E++SKTRKGAI+VGFHYG GR+R AR + + G + A+ D Q R GR G P LR+R + GLLG+RW RVILDEAHSIRNT TEQSRACL LEA++RWAVTGTPIQNSLDD+AALLAFLRHEPWSDRGWWRKVI+DPYKDGD EALRRLKTVLAPILLRRTK+TLDSRGRPIVELPPK VEIVR+ S EREFYEALK+RSK+EFEGYVAAGTVMKSYIAILTLLLRLRQA CNHPFLVLG G A +A+ A P P + L S ++ ETL EGG D GKSPP YV+ELYRRY RVA
Sbjct: 1 MSGLIEQLGTLRAVGVDGDERQLQLLLRTAGYNVERAINRPYTVPVKKSVNESNPWVNYLLLFAACELAAVPASLHPQSYFESGLPGPPRGTCQESTTPTPSPPTAGVAPAPPRPSRGTPNNSTSQGLPRKDKD---AVGRSPASDAGRLHATPAGKPAARNKEAGWPKLVGQRWVTGYTISKGSMKYREQVTIISEGSGLSSRSSPPAQGKGNKGRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFGRPKASSAGAMSNILFRGSTGRVEGRLPREVCAFLAPLLQEGLAKAHAEAVCDLPGLGKFAEVPLMLSIEIEEGLFALDPDEELYRSAYCLLQFAHTGHIEQEQP-KSQQAAAAAAEKGKADHQQAERTLAKEERNXXXXXXXXXXXVREEDLKELYNDETQLCEMPEARDPRLFVDGLALRRYQRQALAWMIQREKKRYVTEEDCTGLSTVTAAXXXXXXXXXXXXXXXXXXXXDVAIRDGRVRVASWGGASSVNTKQGGSADCGGGPGVAMHPLWERRAAASIASIVVRKEASGDSLDLFGDSGMDDGDDGDNARSGEEKGTPQLVLSQPEAFFVNVYSRRFQREFPPASLGCRGGILADEMGMGKTVMLLSLILSDKERXXXXXXXXNGVXXXXXXXXGEKGQEEGEGPATVGRDSSLVVCLDDXXXGDSASAAEHDFNGKPKLGSGGPGGLNAAVSSPEDALAI--------------ADLPSRGKRRSPAVTEAVPSLAGSVAAGTKRXXXXXXXXXLDV--SXXXXXXXSSDGES----DFMLTPESXXXXXXXXXXXXXXEPTAGKGKSRAVAANGGPSKRRRGETGKRVGANGKGCSGGGRWGGGKAGFDPSALLLDPY-------AVGAQESNGGERVAS----GRGAG-------KGGGTLVVCPLSLIGQWRGELESKTRKGAISVGFHYGAGRSRRVHARAVPKGRGPDDVRGALERNGQARGRRDCQRIHRTGNNGRRRRRRGRKCNTGRCGAAKRIDKLGLIGGVPGRGEQYLRRRAYQGVGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQASSLPAMHKQASRLLACNHPFLVLGKGFSMAPSSASSAVP---------PGARRNQLGSAXXXXXXXXXXXXNNESETLFERGVVEGG-DGGKSPPHYVQELYRRYRERVA 1275
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: D7FJC4_ECTSI (DNA repair helicase rad5,16, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC4_ECTSI) HSP 1 Score: 625 bits (1611), Expect = 3.120e-206 Identity = 425/891 (47.70%), Postives = 482/891 (54.10%), Query Frame = 1
Query: 553 MAHILFRSSKSGVEGRLPREVCTFLAPLLQRGLARAHAEAVCDLPGLGVFAEVPLTLAIEIEEGIFALDPDEELYRSAYALLEFAHTGQIEQEQPRRANQASAAAAADGVKNEGQEGASGDIQDREGESEKQ--------------VRDEDVRHLYDDEAQLCSMPEAPDPRLFAEGLTLRRYQRQALAWMVQREKRRCVTEEDCTALS--LGGSSAHTAEIPKGAQSGGEEGVVLRDGCVHVAYWQSAAAR------GDGVEKAGVAMHPLWERRAAAFLGLK--VSPGPPSVLGLSIAKKAGHESLAPRDGESCGGEATLSHPVPYYTNVYTKRFQREFPRASLGCRGGILADEMGMGKTVMLLSLILTDKERRQRDGSSEEGDTVLNESGARPVKAAGKDGDRGPIYPVEGEGTDSGSLLAPGGDSNGVFPAKRGVVNSEHFRTRGPDIAATKRRRLDESKRGGSSGGDFARVGGKAAVVVRAGVQPGESHDVEGAEGGRSAGRRPALDTRSSQVAVSGGANEGEDEKDPDFEPFPSPRPPSKTTGKTRTAAKREGVGGAGTRGKSDAANPSHGGRREGGRVGSNHSVLRKDSYDARTDEEAVVEGEGTGDRSVVANLLGGRSAGGPTDGDVHAEGTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTR-----------------SARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSK 3102
M++ILFR S VEGRLPREVC FLAPLLQ GL +AHAEAVCDLPGLG FAEVPL L+IEIEEG+FAL+P+EELYR+AY LL+FAHTG IEQEQP ++ QA AAAA ++G + D Q E K VR+EDV+ LYDDE QLC MPEA DPRLF +GL LRRYQRQALAWM+QREK+R VTEEDCT LS V +RDG V VA W A++ GD GVAMHPLWERRAAA + ++ S + G S ++ + LS P ++ NVY++RFQREFP ASLGCRGGILADEMGMGKTVMLLSLIL+DKE +EH V G+ G GGR+A T S + A+ AN PS GK R+ A E V PS G V + R DE G G R + GR G GTLVVCPLS+IGQWR E++SKTRKGAI+VGFHYG GR+R S R+LCR DVVLTTYGV+SSEMAKHE D A A GLLG+RW RVILDEAHSIRNT TEQSRACL LEA++RWAVTGTPIQNSLDD+AALLAFLRHEPWSDRGWWRKVI+DPYKDGD EALRRLKTVLAPILLRRTK+TLDSRGRPIVELPPK VEIVR+ S EREFYEALK+RSK
Sbjct: 1 MSNILFRGSTGRVEGRLPREVCAFLAPLLQEGLVKAHAEAVCDLPGLGKFAEVPLMLSIEIEEGLFALEPEEELYRNAYCLLQFAHTGHIEQEQP-KSQQAVAAAA--------EKGKADDHQQAEKTLAKXXXXXXXXXXXXXXXVREEDVKELYDDETQLCEMPEARDPRLFVDGLALRRYQRQALAWMIQREKKRYVTEEDCTGLSSVTAXXXXXXXXXXXXXXXXXXXXVAIRDGRVRVASWGGASSNTKQGGSGDCGGGPGVAMHPLWERRAAASIVVRKEASGDCLDLFGGSGMGDXXXXXXXXXXXDNRAPQLVLSQPEAFFVNVYSRRFQREFPPASLGCRGGILADEMGMGKTVMLLSLILSDKEXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANAAEH-------------------------------------------VSKGKQKLGSGGPGGRNAA------TSSPEDAL---ANAD----------LPS-------RGKRRSPAVTEAV-------------PS-----SAGSVAAGMKRXXXXXXXVRLDES-----NGGGKR-----VARGRGVG-------KGGGTLVVCPLSLIGQWRGELESKTRKGAISVGFHYGAGRSRRVWAGTRKRRWLGIGPRSTRELCRKDVVLTTYGVLSSEMAKHEADATARESTAPATXXXXXXXXXXXXPAGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSK 769
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A836CF42_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF42_9STRA) HSP 1 Score: 305 bits (782), Expect = 5.780e-82 Identity = 375/1323 (28.34%), Postives = 501/1323 (37.87%), Query Frame = 1
Query: 16 EQLSTLRAVVP-DGDEKQLQLLLRTANYNVQRAINHYFDSGLPVPXXXXXXXXXXXXXXXXXXXXXPADAAGF----------------GVDSNSLVPIAPPPSKRVPLALVRSATESPRRLKEP-------GWP----------KLIGERLVTGYSTRRGS-IEHREHVAIISEG---SGISSTRGRGGTSGGKXXXXXXXXXXXFGRNKVSSAGAMAHILFRSSKSGVEGRLPREVCTFLAPLLQRGLARAHAEAVCDLPGLGVFAEVPLTLAIEIEEGIFALDPDE--ELYRSAYALLEFAHTGQIEQEQ--PRRAN-------------------QASAAAAADGVKNEGQEGASGDIQDREGESEKQVRDEDVRHLYDDEAQLCSMPEAPDPRLFAEGLTLRRYQRQALAWMVQREKRRCVTEEDCTALSL---------------------------------------------------------------GGSSAHTAEIPKGAQSGGEEGVVLRDGCVHVAYWQSAAA-------------RGDGV------EKAGVAMHPLWERRAAAFLGLKVSPGPPSVLGLSIAKKAGHESLAPRDGESCGGEATLSHPVPYYTNVYTKRFQREFPRASLGCRGGILADEMGMGKTVMLLSLILTDKERR---QRDGSSEEGDTVLNESGARPVKAAG--------KDGDRGPIYPVEGEGTDSGSLLAPGGDSNGVFPAKRGVVNSEHFRTRGPDIAATKRRRL-----DESKRGGSSG----------------------GDFARVGGKAAVVVRAGVQPGESHDVEGAEGGRSAGRRPALDT-----------------RSSQVAVSGGANEGEDEKDPDFEP-----------------FPSPRPPSKTTGKTRTAAKREGVGGAGTRGKSDAANPSHGGRREGGRVGSNHSVLRKDSYDARTDEEAVVEGEGTGDRSVVANLLGGRSAGGPTDGDVHAEGTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSAR-DLCRFDVVLTTYGVISSEMAKHEGDVQAGS----RAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVE-------------------------------IVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLGAGGRA 3231
E+L L+ VV D L+LLL+ A+Y+V RA+NHYF +GLP A G S + K + R + R ++E WP K + ER V GY+T +G I+ E V I +G + XXXXXXXXXXX A A AHI F +++ G EGRLP ++C LAPLL+ GL A + F+ VPL L + + G+FA D L +A+ LL F TG+++ P A +A AAAA G +GA E +V V L + ++PEAPDP GL+LRRYQRQALAWM++RE+ +T + G + S E+ V++ G ++AAA R DG ++ AMHPLWER A + G+ PVP+Y N +++R Q FP A+ CRGG+L DEMGMGKTVMLLSLIL DK +++ D ++ GA+P + G + P E A +R+R D + S GR+ T ++ E+ DFEP S + EG + G +A +R GGR S R+ G + A G R++GG TLVVCP+S+IGQWR+E+++ T GA+ V F+YG R R L +DVVLTTYG +E+ EG G+ +A+V G + + +GLLG+RWRRVILDEAH+I+N TTE +RA +L AE RWAVTGTPIQNSL+D+ AL+ FLRHEPWSD WW +VIA A L +L+PI+LRRTK TL G+PIV LPP+ VE ++R+ FS EREFY+AL+ RS+ EF GY+ AGT M SYIAIL LLLRLRQAC+HP L LG +A
Sbjct: 9 EKLQQLKDVVGHDVPALSLKLLLQNADYDVARAVNHYFSAGLPTIPTPAAAPSGTARSAAVGGSKKAATXXXXXXXXXXXXXXXXXXKSGAKSKAGAKAPKAGGKAGQTVMQRFIADPARPVQEATSAAASFSWPGKSGVQAKELKFLTERWVEGYATVKGKHIQRDEPVTIHLDGMKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAFAHIRF-TTRGGAEGRLPGDLCGALAPLLEAGLMEIAARCALPVASTAHFSRVPLLLRVAVRPGLFAFDAARAPRLSAAAFQLLLFGATGEVDPGALPPPEAXXXXXXXXXXXXXXXXXXXXKALRAAAAHSGDEAGADGA-----------EAKVDAAQVESLLST-MEPRALPEAPDPPQL-RGLSLRRYQRQALAWMLERER---ITHNSSAGGTXXXXXXXXXXXXXXXXXXXXXXXXNGSXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXIVGENGSAXXXXXXXXXXXXSASEDVVIIGSGQAGATATRAAAADDGAPCRVSGGVVRADGXXXXXXXDEGEGAMHPLWERHFLATVE---------------------------------GDGRAHSPVPFYLNKFSRRCQLAFPPAARRCRGGMLCDEMGMGKTVMLLSLILADKHALGVPAGGAATDIADMLVGADGAQPEQRVGCSVAISVAAEAAVATALPDASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVRRRKRALPLPADTAAAARSVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKRVSTTVYIADXXXXXXXXXXXXXXXXXXXCMSVSDRSSEEXSDFEPEKRXXXXXXXXXXXXXXXXXXXXXSSDGXEXXXXXXLEGFASESSDGSIEAPRKR---QRTGGRAA---SATRRXXXXXXXXXXXXXXLTVAGVPAGGAVARGRRASGGG-----RGRSTLVVCPMSLIGQWRAELENHTHAGALRVLFYYGDARCRGDEAHLQAYDVVLTTYGTACAELRAAEGTSGRGAFAAQKASVAEALLHGDGGGTKARVSGLLGLRWRRVILDEAHTIKNATTETARAAFMLRAESRWAVTGTPIQNSLEDLLALVRFLRHEPWSDPVWWNRVIA---------AASSL-AMLSPIMLRRTKDTLGEDGQPIVTLPPRNVERRRSPHALPLPLLPXXXXXXXXXXXXXXXXQVLRVRFSAAEREFYQALRDRSRAEFMGYINAGTAMNSYIAILALLLRLRQACDHPLLALGRDAQA 1260
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A5A8D5B7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5B7_CAFRO) HSP 1 Score: 271 bits (692), Expect = 2.260e-73 Identity = 141/288 (48.96%), Postives = 185/288 (64.24%), Query Frame = 1
Query: 2398 TLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQ---------------KAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLG 3216
TLVVCP+S++GQW EI+ T +G + V H+G R SAR L DVV+T+YG+++ EM + G A A G A + G RWRRV+LDEAH+I+NT+T+ SR+CL +EA RWA+TGTP+QNSL D+ +L+ F+RH+PW + WWR+VIA P++ GD AL L+ +L P+LLRRTK D GRPIV LPPK E+V + S ER FY+A+ RSK FEG+ AAGTV+ Y IL+LL+RLRQAC+HPFLVLG
Sbjct: 116 TLVVCPVSLLGQWAREIERFTPQGHLRVVIHHGTSRLLSARQLEGVDVVITSYGMVAHEMHRLGGAQAAADVALAAASTGRGXXXXXXXXXXXXXXXXXXXXXXXSAVVYGARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQACDHPFLVLG 403
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A8K1CQ45_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ45_PYTOL) HSP 1 Score: 272 bits (695), Expect = 4.380e-72 Identity = 139/276 (50.36%), Postives = 183/276 (66.30%), Query Frame = 1
Query: 2398 TLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAG---LLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLG 3216
TL++CPLS++ QW+ E+ ++ + ++V +YG R ++ + + D+VLTTYGV+SSE K QK G LLG W RVILDEAHSI+N T RAC L+A RW +TGTPIQNSL D+ +LL FLR+EPWS WW++VIA+P++ GD +AL RLK +L PILLRRTK + D+ G+ IVELPPK +EI ++ F+ EREFY+A+ RS+ EF GYV++G M SYIAI LLLRLRQAC+HPFL LG
Sbjct: 490 TLIICPLSLLHQWKDEVHNRFKPQTLSVLVYYGDERETASFSI-KSDIVLTTYGVLSSEFEK---------------------------QKNGSSVLLGTEWDRVILDEAHSIKNRATTYFRACAALQAVHRWCLTGTPIQNSLSDLFSLLCFLRYEPWSRVAWWKRVIANPFEQGDDQALVRLKVILTPILLRRTKHSRDAHGKNIVELPPKHIEIAKLQFTEEEREFYQAVYDRSRAEFNGYVSSGAGMSSYIAIFALLLRLRQACDHPFLALG 737
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: UPI000C1CFC62 (DNA repair protein RAD5A isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CFC62) HSP 1 Score: 266 bits (679), Expect = 2.910e-70 Identity = 125/278 (44.96%), Postives = 186/278 (66.91%), Query Frame = 1
Query: 2389 AEGTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLGAG 3222
A G L++CP+++IGQW++EI++ R GA+++ HYG R++ A+ L + DVVLTTYGV++SE + G+ + GL IRW RV+LDEAH+I++T ++ S A L A+RRW +TGTPIQN+L+DV +LL FLR EPW WW K++ P+++GD L+ ++++L PI+LRRTK + D GRPI+ LPP +++++ + + E++FYEAL RSKV+F +V G V+ +Y +IL LLLRLRQ C+HPFLV+ G
Sbjct: 494 AGGNLIICPMTLIGQWKTEIETHARPGALSIYVHYGQSRSKDAKVLAQSDVVLTTYGVLASEFSTENGE-----------------------ENGGLYSIRWFRVVLDEAHTIKSTKSQISMAAAGLIADRRWCLTGTPIQNNLEDVYSLLRFLRIEPWGSWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKFSTDREGRPILVLPPADIQVIYCDLTETEKDFYEALFNRSKVKFNQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG 748
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A2U1Q4G7_ARTAN (Helicase, C-terminal n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1Q4G7_ARTAN) HSP 1 Score: 261 bits (667), Expect = 3.240e-70 Identity = 123/276 (44.57%), Postives = 182/276 (65.94%), Query Frame = 1
Query: 2395 GTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLGAG 3222
G L++CP+++IGQW+SEI+S GA+++ HYG R + A+ L + DVVLTTYGV++SE + + ++ GL +RW RV+LDEAH+I+++ ++ S A L A+RRW +TGTPIQN+L+D+ +LL FLR EPW WW K+I P++DGD L ++ +L PI+LRRTK + D GRPI+ LPP E++++ + E++FY+AL +RSKV+F+ +V G V+ +Y +IL LLLRLRQ C+HPFLV+ G
Sbjct: 330 GNLIICPMTLIGQWKSEIESHAEPGALSIYVHYGQSRPKDAKILAQSDVVLTTYGVVASEFSSENAE-----------------------ERGGLYSVRWFRVVLDEAHTIKSSKSQISMAAATLVADRRWCLTGTPIQNNLEDIYSLLRFLRIEPWGSWAWWNKLIQKPFEDGDERGLSLVQNILRPIMLRRTKFSTDRDGRPILVLPPAEMKVIYCEQTEAEKDFYDALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG 582
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A218WA61_PUNGR (DNA repair protein RAD5A isoform X2 n=7 Tax=Punica granatum TaxID=22663 RepID=A0A218WA61_PUNGR) HSP 1 Score: 265 bits (676), Expect = 7.010e-70 Identity = 121/276 (43.84%), Postives = 187/276 (67.75%), Query Frame = 1
Query: 2395 GTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLGAG 3222
G+L+VCP++++GQW++EI+S + G++++ HYG R + A+ L + DVV+TTYG+++SE + + + GL +RW RV+LDEAH+I+++ + S A LEA+RRW +TGTPIQNSL+D+ +LL FLR EPW + WW K+I P+++GD L+ ++++L PI+LRRTK T D GRPI+ LPP +++++ + + ER+FYEAL ++SKV+F+ +V G V+ +Y +IL LLLRLRQ C+HPFLV+ G
Sbjct: 495 GSLIVCPMTLLGQWKAEIESHAQPGSLSIYTHYGQSRPKDAKILSQSDVVITTYGILASEFSSENAE-----------------------ENGGLFSVRWFRVVLDEAHTIKSSKGQISLAAAALEADRRWCLTGTPIQNSLEDIYSLLRFLRVEPWGNWAWWNKLIQKPFEEGDERGLKLVQSILKPIMLRRTKFTTDQEGRPILVLPPADIQVIYCDLTEAERDFYEALFKKSKVKFDKFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG 747
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: A0A6J0PEI4_ELAGV (DNA repair protein RAD5A isoform X3 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6J0PEI4_ELAGV) HSP 1 Score: 259 bits (663), Expect = 8.210e-70 Identity = 125/276 (45.29%), Postives = 183/276 (66.30%), Query Frame = 1
Query: 2395 GTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLGAG 3222
G+L+VCP++++GQW++EI++ + GA+ V HYG R + A+ L + DVVLTTYGV++SE F GL +RW R++LDEAH+I+++ ++ S A L A+RRW +TGTPIQN+L+D+ +LL FL+ EPW+D G W K+I PY++GD L+ ++++L PI+LRRTK++ D GRPI+ LPP VE+ S E++FYEAL +RSKV+F+ +V G V+ +Y +IL LLLRLRQ C+HPFLV+ G
Sbjct: 224 GSLIVCPMTLLGQWKAEIETHVQPGALTVYVHYGQSRPKDAKFLAQSDVVLTTYGVLASE-----------------------FSAENAEGNGGLYSVRWFRIVLDEAHTIKSSKSQISMAAASLTADRRWCLTGTPIQNNLEDIYSLLRFLKVEPWADWGLWHKLIQKPYEEGDERGLKLVQSILKPIMLRRTKSSTDRDGRPILVLPPANVEVHYCEMSAAEKDFYEALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG 476
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Match: W1PYR3_AMBTC (Uncharacterized protein n=4 Tax=Amborella trichopoda TaxID=13333 RepID=W1PYR3_AMBTC) HSP 1 Score: 264 bits (675), Expect = 1.170e-69 Identity = 124/276 (44.93%), Postives = 185/276 (67.03%), Query Frame = 1
Query: 2395 GTLVVCPLSMIGQWRSEIQSKTRKGAIAVGFHYGPGRTRSARDLCRFDVVLTTYGVISSEMAKHEGDVQAGSRAAVGGRAAAGFPLRKRRQKAGLLGIRWRRVILDEAHSIRNTTTEQSRACLLLEAERRWAVTGTPIQNSLDDVAALLAFLRHEPWSDRGWWRKVIADPYKDGDMEALRRLKTVLAPILLRRTKTTLDSRGRPIVELPPKEVEIVRMNFSPVEREFYEALKQRSKVEFEGYVAAGTVMKSYIAILTLLLRLRQACNHPFLVLGAG 3222
G L+VCP++++GQW++EI++ G++++ HYG R + A+ L ++DVVLTTYGV++SE F GL +RW RV+LDEAH+I++T ++ S A L A+RRW +TGTPIQN+L+D+ +LL FLR EPWS+ G W K+I P+++GD L+ ++T+L PI+LRRTK++ D GRP++ LPP +VE++ + E++FYEAL +RSKV+F+ +V G V+ +Y +IL LLLRLRQ C+HPFLV+ G
Sbjct: 515 GNLIVCPMTLLGQWKAEIEAHVEPGSLSLYVHYGQSRPKDAKVLTQYDVVLTTYGVLASE-----------------------FQAENAEDNGGLYSVRWFRVVLDEAHTIKSTKSQTSMAAAALTADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWSNWGLWHKLIQKPFEEGDERGLKIVQTILRPIMLRRTKSSTDKEGRPMLVLPPADVEVIYCELTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRG 767 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1286.2107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1286.2107.1 >prot_F-serratus_M_contig1286.2107.1 ID=prot_F-serratus_M_contig1286.2107.1|Name=mRNA_F-serratus_M_contig1286.2107.1|organism=Fucus serratus male|type=polypeptide|length=1151bp MSGLIEQLSTLRAVVPDGDEKQLQLLLRTANYNVQRAINHYFDSGLPVPPback to top mRNA from alignment at F-serratus_M_contig1286:19876..29260- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1286.2107.1 ID=mRNA_F-serratus_M_contig1286.2107.1|Name=mRNA_F-serratus_M_contig1286.2107.1|organism=Fucus serratus male|type=mRNA|length=9385bp|location=Sequence derived from alignment at F-serratus_M_contig1286:19876..29260- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1286:19876..29260- >mRNA_F-serratus_M_contig1286.2107.1 ID=mRNA_F-serratus_M_contig1286.2107.1|Name=mRNA_F-serratus_M_contig1286.2107.1|organism=Fucus serratus male|type=CDS|length=6906bp|location=Sequence derived from alignment at F-serratus_M_contig1286:19876..29260- (Fucus serratus male)back to top |