mRNA_F-serratus_M_contig1283.2098.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: A0A6H5KZM9_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM9_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 3.930e-122 Identity = 253/554 (45.67%), Postives = 325/554 (58.66%), Query Frame = 3
Query: 1110 ITIPLKNAEFQYTVEVRVSNESYEADATLIVDTALHIVGFPTCS--------GDSEEEGGGDVG--CIPSKYAEGAESCSYTCRQFDRDDGTVILYSGFFSDLEASPFEQQTTLRCLSDQSVELLNSTLEYSNNSSATLSASGSV-VLISIQSSDSVSTLKGWSSTQGVLGLAPHLGPDCNSADSREA-----SVFSSILGFDNDDLEPMFALNLNDNGSESTLEIGGHTASSNAGWGELLWGEQHTASKPYGWGFSAFDLSVCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLPCR---LDFDSGAEHMCYVDEDTASSDLPYLSFRLSEHGTPMYIPLGSLLLNEG--PSDDP---DSTERRLCVTRGDSIFDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLSQK----PLNVLPQDHNETCEAPTVCVGMQTYTESTNSCEDPICSTYFF-------ARLDVETMTCRSPVSLSRFAWTVGIVIALTEMGVHFLRAYYGGTGVALRGQRQPHDWEFHIGRLIDTGVGKAVRALGLS 2666
+ +PL A QYT V V++ +Y + ATLIVDT + +V FP CS G ++EEGGG G CIP + E+ CR D GTV L+ D S F L L DQ+ E+ ST +SASGSV + +D+ TL GW GVLGLA C S D E SVFS + G D+ +FAL+L D STLEIGG++ SS+ G++ WG++ TA+ P WGF AFDL+VCGR+LM NIT+ WPAV+ TGSACLGLP E FD L+SWLP D ++G MC + + A+ +LP LSFRLS+HG +Y+PL LLL +G PS+ D +RRLCVTR +I IF++P QPV++LGTL LRS+YAV+D ++ RVGL+QK + +N +C A VCVGMQ + ES N+CEDP CS+Y+ A LD ETMTC+S ++ W GI +TEM HFLRAYYGGTGV LRG WEFH GRLI+ +GKA R+ GLS
Sbjct: 269 VMVPLTPAGLQYTANVTVASGNYSSTATLIVDTTVSMVAFPVCSNVTGVEDGGSADEEGGGGDGKVCIPFEDTLD-EAGEKPCRAGTLDGGTVSLHP---EDPPGSQF-----LPYLQDQASEVSLST---------NVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCTS-DGTEVNGSLRSVFSQMDGADS-----VFALDLGDESYNSTLEIGGYSGSSSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPHEFFDSLMSWLPVEGHCPDPENGG--MCSISAENAAMELPSLSFRLSQHGQELYVPLSVLLLEDGDQPSNSSSVNDGNDRRLCVTREAAIRQSGWIFELPSMQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFRESYNACEDPSCSSYYLTALVAAGANLDDETMTCKSTGIMTILVWVFGIFFGITEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIEACLGKATRSAGLS 796
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: D8LIV0_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV0_ECTSI) HSP 1 Score: 378 bits (971), Expect = 8.060e-117 Identity = 235/516 (45.54%), Postives = 301/516 (58.33%), Query Frame = 3
Query: 1218 IVGFPTCS-------GDS-EEEGGGDVG--CIPSKYAEGAESCSYTCRQFDRDDGTVILYSGFFSDLEASPFEQQTTLRCLSDQSVELLNSTLEYSNNSSATLSASGSV-VLISIQSSDSVSTLKGWSSTQGVLGLA--PHLG--PDCNSADSREASVFSSILGFDNDDLEPMFALNLNDNGSESTLEIGGHTASSNAGWGELLWGEQHTASKPYGWGFSAFDLSVCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLPCRLDF-DSGAEHMCYVDEDTASSDLPYLSFRLSEHGTPMYIPLGSLLLNEGPSDDPDST--------ERRLCVTRGDSIFDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLSQK----PLNVLPQDHNETCEAPTVCVGMQTYTESTNSCEDPICSTYFFARLDVETMTCRSPVSLSRFAWTVGIVIALTEMGVHFLRAYYGGTGVALRGQRQPHDWEFHIGRLIDTGVGKAVRALGLSPPRRD 2681
+V FP CS GDS +EEGGG G CIP + E+ CR D GTV L+ E P Q L L DQ V L S +SASGSV + +D+ TL GW GVLGLA PH D + SVFS + G D+ +FAL+L D STLEIGG++ SS+ G++ WG++ TA+ P WGF AFDL+VCGR+LM NIT+ WPAV+ TGSACLGLP+E FD L+SWLP D D +C + + A+ +LP LSFRLS+HG +Y+PL +LLL+E +ST +RRLCVTR +I +F++P QPV++LGTL LRS+YAV+D ++ RVGL+QK + +N +C A VCVGMQ + ES N+CEDP CS Y+ LD ETMTC+S ++ W G+ +TEM HFLRAYYGGTGV LRG WEFH GRLI+ +GKA R+ GLSPP +
Sbjct: 1 MVAFPVCSNVTGVEEGDSADEEGGGGDGNACIPFEDTLD-EAGEKPCRAGTLDGGTVSLHP------EDPPGSQ--VLPYLQDQEVSL-----------STNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQMEGADS-----VFALDLGDESYNSTLEIGGYSGSSSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMGNITTFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGGICSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGDQPSNSTSTSTNDGVDRRLCVTREATIRQSGWVFELPSMQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSYYYLTNLDNETMTCKSTGIMTILVWVFGMFFGITEMAGHFLRAYYGGTGVGLRGHEHHQGWEFHTGRLIEACLGKATRSAGLSPPHHE 491
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: L1J2B6_GUITC (Peptidase A1 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2B6_GUITC) HSP 1 Score: 175 bits (444), Expect = 1.310e-42 Identity = 154/522 (29.50%), Postives = 236/522 (45.21%), Query Frame = 3
Query: 1074 YGQEDNGQGGSIITIPLKNAEF--QYTVEVRV---SNESYEADATLIVDTA---LHIVGFPTCSGDSEEEGG--GDVGCIPSKYAEG--------AESCSYTCRQFDRDDGT------VILYSGFFSDLEASPFEQQTTLRCLSDQSVELLNSTLEYSNNSSATLSASGSVVLISIQSSDSVSTLKGWSSTQGVLGLAPHLGPDCNSADSREASVFSSILGFDNDDLEPMFALNLNDNGSESTLEIGGHTASSNAGWGELLWGEQHT----ASKPYGWGFS-----AFDLSVCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLPC---------RLDFDSGAEH---------MCYVDEDTASSDLPYLSFRLSEHGTPMYIPLGSLLLNEGPSDDPDSTERRLCVTRGDSI-------FDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLSQK-PLNVLPQDHNETCEAPTVCVGMQTYTESTNSCEDPICSTYFFARLDVETMTCR 2462
+G+ + G +IPL Y V++++ SN S A LIVDT + I G CS DS E G + C + ++ + ++ C Q+D+ +L G+ ++ + L+ LS S++SS L + +++ S+D + L+ W++TQG LGL H+ D +S+ + F +L + +F+L+LND +S + +G GWG+L W E +S Y ++ F L +CG +L DNI+S W A++ TG+ACL LP+E+FD +VSW P R DF A +CY+ E DLP LSFR+SE G +++PL SL++N+ PS P R+C+ DSI D L F P I+ GTL LR+++ D VG+ K + C P C G QT+ N+C DP C ++F LD +T TCR
Sbjct: 43 FGRPSSPLGAFNHSIPLYATSHGKHYMVDIQLGYDSNSSTAQTARLIVDTGSGDIVIFGSVECSKDSSEYNHAIGGLSCYNYQKSKSFKFNVEGLGQRVNHEC-QYDQPGHPGAYCKEALLIDGYKAEAMCELAWEDVQLKDLS-------------SSSSSGFLPIRTDICIVNDTSTD-LYKLRYWNNTQGTLGLFYHV-CDPGQGESKCETPFPPLLSSWPSWMPRIFSLDLNDPKEDSWMHLGAPAG----GWGDLQWSETQPIAILSSSSYNLRYAFHSLEIFHLQLCGVDLFDNISSHWTAMVDTGAACLSLPQELFDMVVSWTPALNCGPELVPRFDFTDCANSACTESKNLTICYLREGMKEEDLPVLSFRMSEDGPLLFLPLASLMINDRPSGKP-----RVCLNPADSIAMYRTEQIKDLLYF------PKISFGTLALRNLFTSFDMRAMSVGMKNKMTFDSTTYAEIGVCSKPVTCRGAQTFYAPMNTCVDPDCEQFYFHELDQDTKTCR 533
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: A0A7S0HVL5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HVL5_9CRYP) HSP 1 Score: 170 bits (430), Expect = 1.230e-40 Identity = 117/340 (34.41%), Postives = 167/340 (49.12%), Query Frame = 3
Query: 1554 LKGWSSTQGVLGLAPHLGPDCNSADSREASVFSSILGFDNDDLEPMFALNLNDNGSESTLEIGGHTASSNAGWGELLWGEQH-----TASKPYGWGFS-----AFDLSVCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLPC---------RLDFDSGAEH---------MCYVDEDTASSDLPYLSFRLSEHGTPMYIPLGSLLLNEGPSDDPDSTERRLCVTRGDSI-------FDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLSQKPLNVLPQDHNET--CEAPTVCVGMQTYTESTNSCEDPICSTYFFARLDVETMTCR 2462
L+ W++TQG LGL H+ D +S+ + F +L + +F+L+LN ES + +G GW ++ W E AS Y ++ F L VCG +L DN +S W A++ TG+ACL LP+E+FD ++SW P + DF A +CY+ E + DLP LSFR+SE G +Y+PL SL++N+ PS P R+C+ DSI D L F P I+ GTL LR+++ D VG+ K + P ++E C P C G QTY N+C DP C ++F LD ET TCR
Sbjct: 238 LRYWNNTQGTLGLFYHV-CDPGQGESKCETPFPPLLSSWPSWMPRIFSLDLNAPQVESWMYLGAPAG----GWKDMEWSETQPIAIVAASSSYNLRYAFHSLEIFHLQVCGVDLFDNFSSHWTAMVDTGAACLSLPQELFDMVLSWTPALHCVPELVPKFDFTDCANSACTESKNLTICYLGEGSGEEDLPVLSFRMSEEGPLLYLPLSSLMINDRPSGKP-----RVCLNPTDSIAMYRTEQIKDLLYF------PKISFGTLALRNLFTSFDMQAMSVGMKNK-IVFDPSTYSEIGKCSVPVTCQGAQTYYAPMNTCLDPDCEQFYFHELDQETKTCR 560
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: A0A7S2TJM4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJM4_9EUKA) HSP 1 Score: 133 bits (334), Expect = 1.290e-29 Identity = 110/333 (33.03%), Postives = 153/333 (45.95%), Query Frame = 3
Query: 1578 GVLGLAPHLGPDCNSADSREASVFSSILGFDNDDLEPMFALNLND----NGSESTLEIGGHTASSNAGWGELLWGEQHTASKPYGWGFSAFDLSVCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLP--CRLDFDSGAEHMCYVDEDTASSDLPYLSFRLSEHGTPMYIPLGSLLLNEGPS------DDPDSTERRLCVTRGDSIFDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLSQKPLNVLPQDHNETCEAPTVCVGMQTYTESTNSCEDPICSTYFFARLDVETMTCRSPVSLSRFAWTVGIVIALTEMGVHFL 2540
G LG AP G SVF +I G + +FAL+LN N S L +GG L W G F DL VCG L N T+ WPA++ T SACL LP+EMFD +V+W P C + G E CY+ LP+L+F+L++ G + L LLL E + D S +RRLC+ +G S+ D P + I +G LR +Y + + R+G++ K + P N C+ C GMQ+Y STN CEDP C YF RL+ ET TC A ++ + E ++++
Sbjct: 30 GFLGAAPVAG-----------SVFQAITGGN----ASVFALDLNPPLEVNNLPSELHVGGIDPKYED---HLTWTGIQQDGNTTGQ-FIIHDLRVCGVQLDPNRTA-WPALIDTSSACLTLPKEMFDVIVTWAPLTCLV----GKE--CYLSAGRFPR-LPHLTFKLTDKGKTFQLDLSDLLLEETDNVTSLRNDKTWSQKRRLCMIQGPSMLDQNGHLVNPLAP--INIGIRALRHLYVAFNVEDGRIGIASKLSDGSPT--NVQCKEKVPCKGMQSYASSTNMCEDPKCHEYFLLRLNDETKTCEFEPGFHAIAALFVLMFVIVEFSLNYI 331
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: A0A7S3GZ76_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ76_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.810e-25 Identity = 94/288 (32.64%), Postives = 136/288 (47.22%), Query Frame = 3
Query: 1779 LLWGEQHTASKPYGWGFSAFDLSVCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLPCRLDFDSGAEHMCYVDEDTASSDLPYLSFRLSEHG---TPMYIPLGSLLLNEGPSDD-----------PDSTER----RLCVTRGDSI---FDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLSQKPLNVLPQDHNET----CEAPTVCVGMQTYTESTNSCEDPICSTYFFARLDVETMTCRSPVSLSRFAWTVGIVIALTEMGVHFLRAYYGGTGV 2567
LLW Q +S Y F D++ C +++ N + +W ++ TG+ACL LP E++D SW F++ + V D S +P S+++S T Y+PL LL+N + P ST+ RLCV RG +I + +P P I+ GTL L+S+Y D + RVG++ K N Q E C A TVC+G Q Y +STNSC+DP CS YFF LD +T C S I+I E+ +F+ Y T +
Sbjct: 71 LLWTVQGVSSPSYHQ-FYIDDVTFCNSHILGNFSQNWQVLVDTGAACLTLPAEIYDSFQSW------FNTSS-----VVNDITS--MPAFSYQVSNSANEVTTAYLPLSDLLINATDIETESGAPIVRVRYPTSTDEVRTMRLCVLRGSNIAHRVGGQTEYYVP--APQISFGTLALQSIYFAADFNDVRVGVANKLSNTYIQGFGEASRTGCAAKTVCIGDQDYHQSTNSCQDPPCSHYFFTELDEDTKKCVFNQSNMVGGLVFIILIVCAEVVSYFVAQYSAHTAM 342
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Match: A0A7S3YA41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA41_HETAK) HSP 1 Score: 93.2 bits (230), Expect = 9.200e-18 Identity = 54/157 (34.39%), Postives = 84/157 (53.50%), Query Frame = 3
Query: 1848 VCGRNLMDNITSSWPAVLYTGSACLGLPEEMFDGLVSWLP---CRLDFDSGAEHMCYVDEDTASSDLPYLSFRLSEHGTPMYIPLGSLLLNEGPS----DDPDSTERRLCVTRGDSIFDDYLIFKMPYSQPVITLGTLVLRSMYAVMDADVNRVGLS 2297
VCG++L+ ++ WP ++ TG+ACL LP E F L+ WL C + G + CY++ + S LP L+FRL+E G +Y+PL LLL++G +DP L V ++ D P I+ G+L ++S+Y D D R+GL+
Sbjct: 50 VCGQDLLAGLSGHWPMLVDTGAACLSLPREFFSKLLVWLENVECVANAPDGIKR-CYLN--STSDSLPVLTFRLTEEGGTLYLPLSDLLLDDGQEICLREDPSVLTTNLDVGSAETYVDP---------PPYISFGSLAVKSLYFAADFDAQRMGLA 194 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1283.2098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1283.2098.1 >prot_F-serratus_M_contig1283.2098.1 ID=prot_F-serratus_M_contig1283.2098.1|Name=mRNA_F-serratus_M_contig1283.2098.1|organism=Fucus serratus male|type=polypeptide|length=768bp MAKCSCSCTTGRPRRFETIGRCAKVVKVSAPTIVRLSVFLAVAYSIEKPNback to top mRNA from alignment at F-serratus_M_contig1283:142380..184626+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1283.2098.1 ID=mRNA_F-serratus_M_contig1283.2098.1|Name=mRNA_F-serratus_M_contig1283.2098.1|organism=Fucus serratus male|type=mRNA|length=42247bp|location=Sequence derived from alignment at F-serratus_M_contig1283:142380..184626+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1283:142380..184626+ >mRNA_F-serratus_M_contig1283.2098.1 ID=mRNA_F-serratus_M_contig1283.2098.1|Name=mRNA_F-serratus_M_contig1283.2098.1|organism=Fucus serratus male|type=CDS|length=4608bp|location=Sequence derived from alignment at F-serratus_M_contig1283:142380..184626+ (Fucus serratus male)back to top |