mRNA_F-serratus_M_contig1282.2097.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: D8LC47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC47_ECTSI) HSP 1 Score: 130 bits (328), Expect = 1.570e-30 Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKRALKEGVEGVK-RPTFKNGELRYPMYKNFRE-KAAEIAKK 426
G E ++L+ E C+GHRGSD+FPFGL +D+ GF +T I+G + GN LTNRE L A D R NSL Y+YDT++W HC DG++F+DAW + A G +K RP FK GE+R P Y + E KA A+K
Sbjct: 162 GTVEVESISLYGETCSGHRGSDVFPFGL-LDSDTDGFTIKTGIRGNLDTGNQLTNREALQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAW--------ENAKARGPSSIKSRPAFKEGEVRRPRYSGYEEIKANAQARK 293
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 132 bits (332), Expect = 6.260e-29 Identity = 68/140 (48.57%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKRALKEGVEGVKRPTFKNGELRYPMYKNFREK-AAEIAKK 426
G E L+L+ E C GH GSD+FPFG+ +D+ GF+ +T +KG E GN+LTNRE+L A D R NS+SY+YDT++W HC DG DFNDAW + A +RP+FK G R PMY EK AA AKK
Sbjct: 665 GTVEVESLSLYGETCQGHGGSDVFPFGI-LDSDTDGFEVKTGVKG-MENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAW-------NGAAQARPTSSSRRPSFKQGAPRAPMYNILEEKRAARAAKK 795
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 128 bits (322), Expect = 9.980e-28 Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKRALKEGVEGVKRPTFKNGELRYPMYKNFREKAAEIAKK 426
G T EI +++++ C GH GSD+FP+ L +D GF+ +T I+G GN LTNRE+L A+DPR NSLSY+YD +EW HC DG DFNDAW D T S R + K +G L + +Y +F EK A+ KK
Sbjct: 592 GTTVSEITSVYSDHCIGHHGSDVFPYYL-LDTDTDGFEVKTGIRGQPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFNDAW--DDTEPSSRTTRPFSHQQKA----HGRLGFSLYSDFNEKMAQRLKK 723
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 127 bits (318), Expect = 3.540e-27 Identity = 62/140 (44.29%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKRALKEGVEGVK-RPTFKNGELRYPMYKNFREKAAEIAKK 426
G E ++L+ + C GHRGSD+FPFGL +D+ F +T I+G + GN LTNREVL A D R NSL Y+YDT++W HC DG++F+DAW + A G +K RP FK GE+R P Y + E A +
Sbjct: 630 GTVEVESISLYGDTCTGHRGSDVFPFGL-LDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAW--------ENAKARGPSSIKSRPAFKEGEVRRPRYSGYDEIMANALAR 760
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 125 bits (313), Expect = 1.520e-26 Identity = 67/161 (41.61%), Postives = 95/161 (59.01%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFG-LAMDAGDPGFKTRTAIKGGE-EGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKR---------ALKEGVEGVKRPT------FKNGELRYPMYKNFREKAAEI-AKKN*PS 438
G T + ++ ++E+C GHRGSD+FPF LA + D F +T IKG GGN++TNREVL A DPR+N+L Y+YDT+EW HC +DG D DAW A G + R + K+G V R + F+ +L +PMY ++K A + A+K P+
Sbjct: 612 GTTYSQPISKYSEECLGHRGSDVFPFDILANEVND--FTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAWLAKGDEEASRGEGPGGQAMSAKKGPRAVSRQSIGGGTVFEKDDLPFPMYGTLKDKMAHLKARKESPA 770
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.180e-23 Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPA 291
G T E + + + C+GH GSD+FPFGL D D GFK +T + G EE GN LTNREVL +D R N L Y+YD + W HC+QDG+DF DAW A
Sbjct: 419 GNTVVETTSKYGDTCHGHSGSDVFPFGLLEDD-DAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAWDA 511
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 115 bits (288), Expect = 1.790e-23 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPA 291
G T E + + + C+GH GSD+FPFGL +D D FK +T ++G EE GN LTNREVL +D R N L Y+YD + W HC+QDG+DF DAW A
Sbjct: 590 GNTVVETTSTYGDTCHGHGGSDVFPFGL-LDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAWDA 682
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 114 bits (286), Expect = 3.680e-23 Identity = 56/133 (42.11%), Postives = 82/133 (61.65%), Query Frame = 1
Query: 25 EILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKRALKEGVEGVKRPTFKNGELRYPMYKNFREKAAEIAK 423
E+++ + +DC GH GSD+FPF L +D+ GF+ +T +KG E GNS TNREVL AMDPRVN LSY+YDT++W HC+ G DF+ A+ T ++ K ++ PT +N + N ++ A +K
Sbjct: 626 EMISRYGDDCVGHGGSDVFPFNL-LDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDTAFDYSSTASAEDKAKSTMKNE--PTMRN------PWANLKKNGAGASK 749
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 106 bits (264), Expect = 2.140e-20 Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 10 GKTTYEILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGT 300
G T E + + + C GH GSD+FPFGL +D D K +T ++G E GN+LTNRE L MD R N+L Y+YD ++W HC+ G+DF+DAW A T
Sbjct: 711 GDTVVETTSNYGDKCYGHGGSDVFPFGL-LDNDDDALKIKTGMQGNGETGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAWDASTT 806
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Match: A0A6H5K0B2_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B2_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 8.040e-12 Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 28 ILNLFTEDCNGHRGSDIFPFGLAMDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPHCMQDGLDFNDAWPADGTNISKRALKEGVEGV 342
I++ ++ CNGHRGSDIFP+G+ D P F G++ N++ NR ++ DP N+L +IYD +EW HC + G DF+D + +K G +G
Sbjct: 636 IISTRSDTCNGHRGSDIFPYGIMSDVITPQFTFY-----GKKAPNTMQNRMLIKLFDPSENALPFIYDNFEWSHCSEMGYDFSDFFDTS-------TMKSGPKGT 728 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1282.2097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1282.2097.1 >prot_F-serratus_M_contig1282.2097.1 ID=prot_F-serratus_M_contig1282.2097.1|Name=mRNA_F-serratus_M_contig1282.2097.1|organism=Fucus serratus male|type=polypeptide|length=112bp MDAGDPGFKTRTAIKGGEEGGNSLTNREVLLAMDPRVNSLSYIYDTYEWPback to top mRNA from alignment at F-serratus_M_contig1282:255823..257431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1282.2097.1 ID=mRNA_F-serratus_M_contig1282.2097.1|Name=mRNA_F-serratus_M_contig1282.2097.1|organism=Fucus serratus male|type=mRNA|length=1609bp|location=Sequence derived from alignment at F-serratus_M_contig1282:255823..257431+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1282:255823..257431+ >mRNA_F-serratus_M_contig1282.2097.1 ID=mRNA_F-serratus_M_contig1282.2097.1|Name=mRNA_F-serratus_M_contig1282.2097.1|organism=Fucus serratus male|type=CDS|length=672bp|location=Sequence derived from alignment at F-serratus_M_contig1282:255823..257431+ (Fucus serratus male)back to top |