mRNA_F-serratus_M_contig128.2088.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A6H5JNI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI0_9PHAE) HSP 1 Score: 308 bits (788), Expect = 8.840e-101 Identity = 147/197 (74.62%), Postives = 162/197 (82.23%), Query Frame = 1
Query: 334 QRSMEFVVPSPPSPTTDDDAELISPQMCFEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWPHLPPG 924
Q++ E PSPPSP + SPQ EAIL ERGYDSTPRSSAS+GCRC PTQKQ+ DYQ+PLVEAVRR D+ ALEALAA GVDMGASNRFGESIVHLATRRGS VL+FLLSH SLRICDDYGKTP+HDAFWTAEPR ++V+MM+ +DW LLRATDVRGATPLRYAK HW WC FLD+VKD WPHLPPG
Sbjct: 75 QQNTEIQRPSPPSPVASVKG-VTSPQAYLEAILLERGYDSTPRSSASDGCRCTPTQKQLDDYQVPLVEAVRRWDMGALEALAADGVDMGASNRFGESIVHLATRRGSTPVLRFLLSHGGSLRICDDYGKTPLHDAFWTAEPRFELVAMMLEMDWGLLRATDVRGATPLRYAKNEHWASWCEFLDRVKDHLWPHLPPG 270
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: D8LSZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSZ7_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.240e-67 Identity = 103/128 (80.47%), Postives = 115/128 (89.84%), Query Frame = 1
Query: 439 RGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVR 822
+GYDSTPRSSAS+GCRC PTQKQ+ DYQ+PLVEAVRR D+ ALEALAA GVDMGASNRFGESIVHLATRRGS VL+FLLSH SLRICDDYGKTP+HDAFWTAEPR ++V+MM+ +DW LLRATD R
Sbjct: 5 KGYDSTPRSSASDGCRCTPTQKQLDDYQVPLVEAVRRWDMGALEALAADGVDMGASNRFGESIVHLATRRGSTPVLRFLLSHGGSLRICDDYGKTPLHDAFWTAEPRFELVAMMLEMDWGLLRATDAR 132
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: W7TFS2_9STRA (Ankyrin repeat-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFS2_9STRA) HSP 1 Score: 177 bits (448), Expect = 6.360e-48 Identity = 86/189 (45.50%), Postives = 114/189 (60.32%), Query Frame = 1
Query: 403 SPQMCFEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWPHLPPGEREIGACGSRVEAGQ 969
SPQ IL+ERGY+++P + ++ PT KQ+ DY IPLV AVR GDL +L +AA+G M A NRFGESIVH++ RRG L+FLL + + +CDD G+TP+HDA W P D VS ++ D L+R D RGATPL Y ++ HW W F D K++YW LP C S +G+
Sbjct: 186 SPQDFLWGILQERGYETSPLLAKTQAFFRPPTAKQVTDYDIPLVTAVRTGDLGSLRDMAAAGRQMDACNRFGESIVHISCRRGQAETLRFLLENGGRVHMCDDLGRTPLHDACWAKVPVFDCVSAIMDQDPSLIRVVDCRGATPLSYIRREHWPEWREFFDSKKEKYWAPLP-------GCASHARSGR 367
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A7S2DD81_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DD81_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.690e-45 Identity = 78/163 (47.85%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 418 FEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYW 906
IL+ERGY++ S C+PT+KQ+ DY + V AVR D+ + + G + A N+FGESI+H+A RRG+ VL+ L+SH A+L I DDYG+TPMHDA W AEP DVV+++++ D LLR D RGATPL Y + H+ +WC FLD KD +W
Sbjct: 140 LNVILKERGYETKRMPSPYV---CKPTEKQVHDYDMDFVAAVRASDVKTISKMLDRGHHVNACNKFGESIIHIACRRGNFKVLEQLVSHGATLSISDDYGRTPMHDACWNAEPCFDVVALLLNRDLELLRVLDKRGATPLSYVRPEHYAIWCAFLDYQKDVWW 299
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A835ZH90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH90_9STRA) HSP 1 Score: 156 bits (395), Expect = 5.180e-43 Identity = 75/173 (43.35%), Postives = 107/173 (61.85%), Query Frame = 1
Query: 397 LISPQMCFEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSA--SLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWP 909
+++P A L RGY + + +PT KQ++DY I LV AVR GDL+ L + A+G M A N+F ES+VH+A R G+ V++F++ + SL I DDYG+TP+HDA WT+EP D+V+ ++ + +L D RG TPL Y KK W W TF+D +KD+YWP
Sbjct: 1 MVNPHEFLIATLAARGYPTRTVVALESRYATKPTAKQVEDYSIDLVNAVRAGDLDTLREMHAAGCSMNACNKFAESVVHMAARIGAREVMEFMIECTGVESLAISDDYGRTPLHDACWTSEPFFDMVTFILDHEVEMLLVKDKRGFTPLLYVKKELWGAWHTFIDAIKDKYWP 173
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A7R9ZHX0_9STRA (Hypothetical protein n=6 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHX0_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.320e-41 Identity = 78/196 (39.80%), Postives = 114/196 (58.16%), Query Frame = 1
Query: 397 LISPQMCFEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWPHLPPGEREIGACGSRVEAGQQPPVL 984
++SPQ +++L+ RGY + S G +PT Q Y + LV AVR D L ++ ASG+ N FGES+VH+ RRG +L+ +L A+L++ DD+G+TP+HDA WTAEP + V +++ D RLLR D RG++PL YAKK HW W +L++ KD YWP A + E ++PP +
Sbjct: 391 MVSPQTFLDSLLKTRGYSTASYCSLETGYYSKPTPYQKASYGLALVRAVRSSDGPTLSSMLASGLSRNPCNAFGESLVHMVCRRGDHGLLRVMLDRGATLQVSDDFGRTPLHDACWTAEPSFECVDLILERDVRLLRILDCRGSSPLSYAKKEHWSEWIEYLERKKDTYWP----------ARDVKAEGEERPPDM 576
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A6H5JRJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ3_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.190e-38 Identity = 79/191 (41.36%), Postives = 108/191 (56.54%), Query Frame = 1
Query: 370 SPTTDDDAELISPQMCFEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLL--SHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWPHLPPGEREI 936
SP E P+ A+LRERGY + + P Q+ Y ++ AV D ALE + +G M A NRFG+SI+H+A RRG A L+FLL + SA + DD+G+T MHDA WT+ PR DV S ++ D RLLR D RG++PL+Y + W +WC F + K+ YWP LPPG ++
Sbjct: 338 SPLVPSIPEGTHPEDFLHALLRERGYTTEMVAMKETVYHRPPEPDQVAAYDKAILRAVLDEDEAALERMRVAGRRMDACNRFGDSILHMACRRGRAAALRFLLRAAGSAGVVSSDDFGRTVMHDACWTSSPRFDVASAVLDADTRLLRTLDSRGSSPLQYVPEDQWPLWCAFFESRKEVYWPKLPPGAEDV 528
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A836CH78_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH78_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.720e-38 Identity = 68/127 (53.54%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 529 LVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWP 909
LV AVR D+ AL A+ +G M A NRFGESI+H A RRGS AV+ FLL A CDD G+ +H A WTAEPR DVV+++++ D RLLR D RGA PL+YA+ HW +WC F K YWP
Sbjct: 1 LVAAVRADDVAALRAMRDAGRCMSACNRFGESILHTAARRGSRAVVAFLLESGAPPGACDDCGRNALHQALWTAEPRFDVVTLLVNADVRLLRCVDKRGAPPLQYARPEHWELWCRFFHSKKHLYWP 127
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: D7FYR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR4_ECTSI) HSP 1 Score: 152 bits (384), Expect = 6.100e-38 Identity = 79/191 (41.36%), Postives = 108/191 (56.54%), Query Frame = 1
Query: 370 SPTTDDDAELISPQMCFEAILRERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLL--SHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWPHLPPGEREI 936
SP E P+ +LRERGY + + P Q+ Y ++ AV D ALE + A+G M A NRFG+SI+H+A RRG A L+FLL + SA + DD+G+T MHDA WT+ PR DV S ++ D RLLR D RG++PL+Y + W +WC F + K+ YWP LPPG ++
Sbjct: 338 SPLVPSIPEGTHPEDFLHDLLRERGYTTEMVAMKETVYHRPPEPDQVAAYDKAILRAVLDEDEAALERMRAAGRRMDACNRFGDSILHMACRRGRAAALRFLLRAAGSAGVVSSDDFGRTVMHDACWTSSPRFDVASAVLDADTRLLRTLDSRGSSPLQYVPEDQWPLWCAFFESRKEVYWPKLPPGAEDV 528
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Match: A0A7S1E3F1_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E3F1_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.940e-37 Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 1
Query: 433 RERGYDSTPRSSASEGCRCEPTQKQIKDYQIPLVEAVRRGDLNALEALAASGVDMGASNRFGESIVHLATRRGSVAVLQFLLSHSASLRICDDYGKTPMHDAFWTAEPRVDVVSMMISIDWRLLRATDVRGATPLRYAKKRHWRMWCTFLDQVKDQYWPHLPPGEREIGACGSRVEAGQQPPVL 984
R GY + S G C+PT Q Y + +V+AVR+ + LE L G+ N FGES+VH+ RRG +L+ L SL++ DD+G+TP+HDA WTAEP + V M++ D RLL D RG++PL Y K+ HW W + +QYW R++ G GQ PP+L
Sbjct: 1 RSLGYCTQNYCSLDGGYYCKPTPLQKASYGVRIVQAVRQSNAELLEKLLKCGLSPNPCNAFGESVVHMVCRRGDFKLLKVLKDAGCSLQVTDDFGRTPLHDACWTAEPNFETVDMILDTDLRLLNVVDCRGSSPLNYVKRDHWGKWIAYFQSKVEQYW-----APRDVSIVG-----GQPPPLL 174 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig128.2088.1 >prot_F-serratus_M_contig128.2088.1 ID=prot_F-serratus_M_contig128.2088.1|Name=mRNA_F-serratus_M_contig128.2088.1|organism=Fucus serratus male|type=polypeptide|length=297bp MGRIEVGSAIRYVSPVTARLFSKTGPEVLGLAGKVLVPVEEGPPAWRRQPback to top mRNA from alignment at F-serratus_M_contig128:710385..718974- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig128.2088.1 ID=mRNA_F-serratus_M_contig128.2088.1|Name=mRNA_F-serratus_M_contig128.2088.1|organism=Fucus serratus male|type=mRNA|length=8590bp|location=Sequence derived from alignment at F-serratus_M_contig128:710385..718974- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig128:710385..718974- >mRNA_F-serratus_M_contig128.2088.1 ID=mRNA_F-serratus_M_contig128.2088.1|Name=mRNA_F-serratus_M_contig128.2088.1|organism=Fucus serratus male|type=CDS|length=1782bp|location=Sequence derived from alignment at F-serratus_M_contig128:710385..718974- (Fucus serratus male)back to top |