mRNA_F-serratus_M_contig128.2066.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: D8LSX2_ECTSI (Similar to intersectin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX2_ECTSI) HSP 1 Score: 321 bits (823), Expect = 1.280e-97 Identity = 193/357 (54.06%), Postives = 235/357 (65.83%), Query Frame = 2
Query: 467 GPGPLGGLIGAVATGAVVASVF-HPPPRRYPPPEAGYIYV-----NRSAGEAP-RAVRAEETSFIIRRVQITSHRQGSGGEIFYEIQVTMNDNYKYVILRRYSQFDQLRERVAQTVRIVTAPFPPKFG-GTSVVGLGPADIQNRMVTLQTWLQSLCTAASTSHPALRLSIYDFLETALYYPPDPSATSETASAATSTPYPTATPYTET------IAEASVVHPPPST------VPQTARFNPV---TNDGWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKRAPVARSAGNPF 1468
GPGPLG L+GA+ATGA +A+V AGYIYV + G AP RAVRA ET FII RV + S+R G GGE+ +E+Q+TMND YKY +LRRYSQFDQLRERV++ +R T PFPPK +S VGLGPAD++ R LQ WLQSLCTAAS + PALR+ +YDFLETA+YYPP+ TS +AA++ ATP T +A A PP+ VP P T GWA+P +SR+ASD+ AMAGP A G+L +AA AL+ TGA +DLRAVW LSDID+DGMLD DEF +AW+LA +AAAG KPPASLPA++VPPSKR S NPF
Sbjct: 41 GPGPLG-LVGALATGAAIAAVVGXXXXXXXXXXXAGYIYVVQEPQSGQVGHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQITMNDGYKYGVLRRYSQFDQLRERVSRVIRTTTPPFPPKSSIRSSTVGLGPADLEERRQMLQAWLQSLCTAASANTPALRVPLYDFLETAMYYPPEAPVTSSDPTAASAQHTAVATPAATTATTGVPVAAAYAEALPPAAGTKGVGVPSAGPLPPKPDSTGYGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSLANPF 396
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A6H5JHJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ6_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.040e-49 Identity = 118/217 (54.38%), Postives = 139/217 (64.06%), Query Frame = 2
Query: 884 LQTWLQSLCTAASTSHPALRLSIYDFLETALYYPPDPSATSE---TASA---ATSTP--------YPTATPYTETIAEA--------SVVHPPPSTVPQTARFNPVTNDGWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKRAPVARSAGNPF 1468
LQ WLQSLCTAAST+ PALR+ +YDFLETA YYPP+ TS TASA A +TP P A Y E + A S PPP P +A DGWA+P +SR+ASD+ AMAGP A G+L +AA AL+ TGA +DLRAVW LSDID+DGMLD DEF +AW+LA +AAAG KPPASLPA++VPPSKR S NPF
Sbjct: 2 LQAWLQSLCTAASTNTPALRVPLYDFLETASYYPPEAPVTSSDPTTASAQHTAVATPAATTATTGVPVAAAYAEALPPAAGTKGVGVSSAGPPPPK-PDSAE------DGWAVPPESRDASDLKMAMAGPSAAGKLTGEQAAVALRTGTGAGQEDLRAVWALSDIDQDGMLDRDEFAVAWYLAHQAAAGNKPPASLPADIVPPSKRQAAQHSLANPF 211
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A6H5JJX9_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJX9_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.390e-34 Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 2
Query: 545 RRYPPPEAGYIYVNRSA--GEA---PRAVRAEETSFIIRRVQITSHRQGSGGEIFYEIQVTMNDNYKYVILRRYSQFDQLRERVAQTVRIVTAPFPPKFG-GTSVVGLGPADIQNR 874
+RYPPP AGYIYV + G+ PRAVRA ET FII RV + S+R G GGE+ +E+QVTMND YKY +LRRYSQFDQLRERV++ +R T PFPPK +S VGLGPAD++ R
Sbjct: 2 QRYPPPPAGYIYVVQEPQPGQVHAPPRAVRAAETPFIIMRVALASYRTGQGGEVLFEVQVTMNDGYKYGVLRRYSQFDQLRERVSRVIRTTTPPFPPKCSIRSSTVGLGPADLEER 117
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A6B2L2G6_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2G6_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 8.240e-14 Identity = 54/118 (45.76%), Postives = 67/118 (56.78%), Query Frame = 2
Query: 1082 VVHPPPSTVPQTARFNPVTNDGWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKR 1435
+V PP S P++ NP + GW + D++ A D F GP G++ G A NTG LR +WELSD +KDG LD +EF LA HL E GRK P LPA+LVPPSKR
Sbjct: 373 LVQPPKSEDPKST--NPFADSGWDVKADAKAAYDQIFHSLGPK-NGKIS-GNVARETLVNTGIETTLLRKIWELSDFEKDGQLDAEEFALALHLTEEVKMGRKVPDVLPASLVPPSKR 486
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A7S0HCE4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HCE4_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-10 Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 2
Query: 1148 WAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKR 1435
WA+ + + FA P L +G + +G +D LR VW LSDID+DG LD DEF +A HL E G+ PA+LP +L+PPSKR
Sbjct: 60 WAVTPADKARYEEIFASLAPQ--NGLVSGMGVRPILERSGLPVDTLRQVWNLSDIDRDGQLDSDEFAVAMHLTRECTTGKAMPATLPPDLIPPSKR 153
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A0M0K7K4_9EUKA (Eps15 homology domain 1 protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K7K4_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 2.620e-10 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 2
Query: 1130 PVTNDGWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKR 1435
P + WA+ + + D F P L +G+A + +G +D LR VW LSD+D+DG LD DEF +A HLA +A AG+ P+ LP+NL+PPSKR
Sbjct: 461 PAPSAVWAVGREDKAKYDEVFQSLNPT--NGLASGQAVRPVLERSGLPVDVLRTVWTLSDVDRDGCLDADEFAVAMHLARDATAGKTLPSVLPSNLIPPSKR 560
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A8J5XXQ9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XXQ9_DIALT) HSP 1 Score: 74.3 bits (181), Expect = 6.690e-10 Identity = 48/112 (42.86%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 1127 NPVTND-GWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKRAPVARSAG 1459
NP +D WA+ R D FA P G G A + + +D LR VW+LSD+DKDG LD DEF LA HL G+ PA+LPA +VPPSKRA + +G
Sbjct: 503 NPFGDDLVWAVSSSERVKYDEVFATLSPS--GGKVGGAAVRPVLERSNLPVDALRRVWQLSDVDKDGQLDADEFALAMHLVRLQVGGKPLPATLPAEMVPPSKRAGASSGSG 612
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A7S2F4E5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4E5_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 9.540e-10 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 2
Query: 1094 PPSTVPQTARFNP--VTNDGWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKRAPVARSAGNPF 1468
P + P + NP + + WA+ E + + F GP G+L + AL A TG LR +WELSDIDKDG LD DEF +A +L +A G+ P +LP+ +VPPSK++ + GNPF
Sbjct: 112 PVAKTPVASAANPFGASTEEWAVAPYQAEFNQV-FYSKGPS-NGKLSPAQVREALMA-TGVAQGVLRCIWELSDIDKDGQLDMDEFAVAMYLCRQAQRGQPMPQALPSQVVPPSKKSYIV---GNPF 232
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: A0A6T9E1W8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9E1W8_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 1.050e-9 Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = 2
Query: 1145 GWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAA--GRKPPASLPANLVPPSKR 1435
GWA+ ++ D FA P G + G L+ +G +D LR VW LSDID+DG LD DEF +A HL + A G +PPASLP +L+PPSK+
Sbjct: 465 GWAVTPTDKQRYDQVFASLNP-VNGLISGGTVRPVLE-RSGLPVDALRQVWNLSDIDRDGHLDADEFAVAMHLTRDLAGKPGAQPPASLPPDLIPPSKK 561
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Match: UPI001C080398 (epidermal growth factor receptor substrate 15-like 1 isoform X1 n=16 Tax=Alosa TaxID=34772 RepID=UPI001C080398) HSP 1 Score: 73.6 bits (179), Expect = 1.560e-9 Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 2
Query: 1136 TNDGWAIPVDSREASDMAFAMAGPDAYGRLEAGKAAGALKANTGALLDDLRAVWELSDIDKDGMLDHDEFTLAWHLAIEAAAGRKPPASLPANLVPPSKRAPVARS 1453
T+ WA+ D R D F GP G L +G + N+ LD L +W+LSD+DKDG LD +EFT+A HL A PA+LP L+PPSKR +A S
Sbjct: 138 TDSSWAVRSDERAKFDGIFESLGP--VGGLLSGDKVKPVLINSKLPLDVLGRIWDLSDVDKDGHLDKEEFTVAMHLVHRAMEKEPVPATLPLTLIPPSKRKKIAGS 241 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig128.2066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig128.2066.1 >prot_F-serratus_M_contig128.2066.1 ID=prot_F-serratus_M_contig128.2066.1|Name=mRNA_F-serratus_M_contig128.2066.1|organism=Fucus serratus male|type=polypeptide|length=358bp MPGPGFGGGRGFGGFHGGRGFGWGPGPLGGLIGAVATGAVVASVFHPPPRback to top mRNA from alignment at F-serratus_M_contig128:124420..130388- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig128.2066.1 ID=mRNA_F-serratus_M_contig128.2066.1|Name=mRNA_F-serratus_M_contig128.2066.1|organism=Fucus serratus male|type=mRNA|length=5969bp|location=Sequence derived from alignment at F-serratus_M_contig128:124420..130388- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig128:124420..130388- >mRNA_F-serratus_M_contig128.2066.1 ID=mRNA_F-serratus_M_contig128.2066.1|Name=mRNA_F-serratus_M_contig128.2066.1|organism=Fucus serratus male|type=CDS|length=2148bp|location=Sequence derived from alignment at F-serratus_M_contig128:124420..130388- (Fucus serratus male)back to top |