mRNA_F-serratus_M_contig127.2008.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A1Y1Z6F4_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z6F4_9FUNG) HSP 1 Score: 81.3 bits (199), Expect = 1.030e-15 Identity = 36/74 (48.65%), Postives = 57/74 (77.03%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
T G +L++A+ V F++ +YAIV+SKL+P TG++ LD I+EDT+YC L+P+T + S A++ +W+ +KFFRHN
Sbjct: 10 TQFWGYVLLIATYVLFVLFMYAIVVSKLMPYTGNKYLDWIKEDTYYCLLIPVTWFVSVYAVFWNWMGMKFFRHN 83
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A397TBE7_9GLOM (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TBE7_9GLOM) HSP 1 Score: 77.8 bits (190), Expect = 5.380e-14 Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
T L G L+ A+ F++S+YAIV+SK +P TG++ LD I++D +YC L+PLT+ + A++ +W+ +KFFRHN
Sbjct: 49 TALWGWFLLFAAYFIFVVSMYAIVVSKFVPETGNKTLDWIKKDEYYCLLIPLTLPVTIYAIFFNWLGMKFFRHN 122
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A4P9ZR61_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZR61_9FUNG) HSP 1 Score: 75.9 bits (185), Expect = 8.850e-14 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 3
Query: 291 GCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
G +L++A+ VFF + +Y ISK +P TG+RLLDAIRED +YC L PLT+ + L +W+ +K FRHN
Sbjct: 11 GYVLLIATFVFFALGLYTTTISKFMPVTGNRLLDAIREDQYYCLLAPLTLTVAFYTLIWNWLGMKIFRHN 80
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: UPI000644E2F9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E2F9) HSP 1 Score: 79.0 bits (193), Expect = 1.830e-13 Identity = 37/74 (50.00%), Postives = 53/74 (71.62%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
T G +++ + VFF+ S Y +VISKLLP TG+R+LD I+ D +YC L+P+ I + +YL+W+SLKFFRHN
Sbjct: 147 TVFYGWFVILCTLVFFLFSTYCLVISKLLPDTGNRILDFIKYDWYYCLLLPVIIPVTIITVYLNWLSLKFFRHN 220
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A2P6NM70_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NM70_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 1.870e-13 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRH 497
T CG L+ FF S++ I ISK+LP TG+ LLD IRED HYCYL+PL++ + + +W+++KFFRH
Sbjct: 23 TGCCGICLLFLVFTFFGASVFTIYISKVLPETGNPLLDTIREDHHYCYLIPLSLMTTYLFFFNNWLAMKFFRH 95
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: W4FKI4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FKI4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.140e-13 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3
Query: 291 GCLLVMASGVFFIISIYAIVISKLLP----ATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
G ++V S +FFI +Y IV++K+LP ++DAIR D HYCYLVPLTI + A+Y+SWVSLK+FR N
Sbjct: 16 GYVIVSLSAIFFITFMYLIVVAKVLPPPTPGRSFPMMDAIRGDQHYCYLVPLTIPVAFIAMYVSWVSLKYFRQN 89
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A8J4PUN0_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUN0_9MYCE) HSP 1 Score: 76.3 bits (186), Expect = 2.660e-12 Identity = 35/75 (46.67%), Postives = 52/75 (69.33%), Query Frame = 3
Query: 276 RTYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
RT G +++ + +FFI S Y + SKLLP TG+++LD I+ D +YC+LVP+ I + +Y +W+SLKFFRHN
Sbjct: 175 RTAFYGWIILFCTFIFFISSTYCLFFSKLLPDTGNKVLDFIKYDWYYCFLVPVLIPVTIITVYFNWLSLKFFRHN 249
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A1Y2GU76_9FUNG (Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-domain-containing protein n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A1Y2GU76_9FUNG) HSP 1 Score: 72.4 bits (176), Expect = 4.670e-12 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
TYL G LL ++ + F S+YA+V S +P TG++ LD I++D+HYC L+P+TI + A+ +W+ +K FRHN
Sbjct: 48 TYLWGYLLFFSTMIGFTTSMYALVASNYMPMTGNKTLDWIKQDSHYCMLLPVTIPVTVLAVLFNWLGMKLFRHN 121
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A151ZHZ4_9MYCE (Ubiquitin domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZHZ4_9MYCE) HSP 1 Score: 75.1 bits (183), Expect = 4.860e-12 Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRHN 500
T G ++++ + +FFI++ Y +V SKLLP +G+R+LD I+ D +YC L+P + + +Y +W+SLKFFRHN
Sbjct: 155 TVFYGWVIILCTLIFFIVTSYCLVFSKLLPDSGNRVLDFIKHDWYYCLLIPALVPVTIITVYFNWLSLKFFRHN 228
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Match: A0A2P6MZZ5_9EUKA (Uncharacterized protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MZZ5_9EUKA) HSP 1 Score: 76.6 bits (187), Expect = 8.520e-12 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 3
Query: 279 TYLCGCLLVMASGVFFIISIYAIVISKLLPATGHRLLDAIREDTHYCYLVPLTIYPSCAALYLSWVSLKFFRH 497
T CG L+ +FF SI++I +SKLLP TG+ +LD IRED HYC+L+PL++ + + +W+++KFFRH
Sbjct: 344 TGCCGICLLFCVFIFFSASIFSIYVSKLLPETGNIVLDTIREDEHYCFLIPLSLMTTYLFFFNNWLAMKFFRH 416 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig127.2008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig127.2008.1 >prot_F-serratus_M_contig127.2008.1 ID=prot_F-serratus_M_contig127.2008.1|Name=mRNA_F-serratus_M_contig127.2008.1|organism=Fucus serratus male|type=polypeptide|length=134bp MSIYVSRESAVLPLDGDTSRPENLAEEEVMTESLRQLLRLPPAVDFSLAPback to top mRNA from alignment at F-serratus_M_contig127:592181..598642- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig127.2008.1 ID=mRNA_F-serratus_M_contig127.2008.1|Name=mRNA_F-serratus_M_contig127.2008.1|organism=Fucus serratus male|type=mRNA|length=6462bp|location=Sequence derived from alignment at F-serratus_M_contig127:592181..598642- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig127:592181..598642- >mRNA_F-serratus_M_contig127.2008.1 ID=mRNA_F-serratus_M_contig127.2008.1|Name=mRNA_F-serratus_M_contig127.2008.1|organism=Fucus serratus male|type=CDS|length=804bp|location=Sequence derived from alignment at F-serratus_M_contig127:592181..598642- (Fucus serratus male)back to top |