mRNA_F-serratus_M_contig127.2004.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig127.2004.1
Unique NamemRNA_F-serratus_M_contig127.2004.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: A0A6H5L107_9PHAE (D27-like_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L107_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 5.710e-103
Identity = 218/472 (46.19%), Postives = 250/472 (52.97%), Query Frame = 3
Query:  315 RPRSISARGVQA-MDVNGS-DVTDIEKKAALDSRQEGLWKRETGPT----IDRPRIETPLDLPQPGKLLQ------LPLMGKPDPTVEQLPPRGGCA--------------------KANPFAVPDNDYKDSWLDSLWINLFSSRMSAAVEAEARRVVAGRRPGINSPPPLEN-----------PGVVEPPMGLAAAGLEGENVGDLSKAREAPRLVGISAASGFPKSLEGLKGGVSEGGGIGGSIAQEGDTGQ-------------------------YTYENYVDLATMLQKGPPERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVG-GAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQCLSSNKQPKVSQRPCHTMPESPLR 1523
            RPRS   RGVQA MDV+G  DV     K ++  R+E L +++ G T    ++ P ++ P +LPQPG+ LQ        L G P      L  R   +                    KA+PFA PDN+Y DS++DSLWINL SS                                        P                          +A  L G  A  G          G + GGG  GS+A                                YTYE+YV LAT LQ G PERQREVV+GV           FYR LFP SKFSA+VNA MCPPLF WLVGKSELT+GVVD+K    G GP Q+ WR+TVK+ERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEF FGQ A+P E+DPLMREPCWT+CLSSNKQPK  QR CHTMPESPLR
Sbjct:   89 RPRS---RGVQATMDVDGPPDVASSGAKRSVVVREEVLRQQKEGATAATTVEFPNVQAPTNLPQPGEWLQQXXXXXXXLGGLPPTADAPLNSRVSLSGLYDDXXXXXXXXXXXXXVKKADPFAAPDNEYTDSFVDSLWINLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRSXXXXXXXXXXXXXXXXXXXXXXADATVLGGEKAGQGGA--------GAANGGGGNGSVALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTYEDYVALATGLQAGAPERQREVVRGVXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDIKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSNKQPKKPQRACHTMPESPLR 549          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: D7FK55_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK55_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 1.850e-96
Identity = 148/195 (75.90%), Postives = 160/195 (82.05%), Query Frame = 3
Query:  942 GQYTYENYVDLATMLQKGPPERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVG-GAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQCLSSNKQPKVSQRPCHTMPESPLR 1523
            G YTYE+YV LAT LQ G PERQREVV+G            FYR LFP SKFSA+VNA MCPPLF WLVGKSELT+GVVD+K    G GP Q+ WR+TVK+ERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEF FGQ A+P E+DPLMREPCWT+CLSS+KQ K  QR CHTMPESPLR
Sbjct:    3 GGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGWLVGKSELTEGVVDVKAAKEGEGPRQEVWRNTVKVERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFAFGQDALPAEEDPLMREPCWTECLSSDKQLKKRQRACHTMPESPLR 197          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: A0A835ZB75_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB75_9STRA)

HSP 1 Score: 194 bits (494), Expect = 5.660e-54
Identity = 99/190 (52.11%), Postives = 126/190 (66.32%), Query Frame = 3
Query:  954 YENYVDLATMLQ-KGP-PERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQCLSSNKQPKVSQRPCHTMPESP 1517
            Y+ ++ LA  +Q K P P  QR V+ G+LR   P W    YR + P SKFSA++NA+MC  L  WLVG S +T   V + G G      + WR+ VK+ERCRYLEAS+CKG CMNLCK+PTE FFRE+LGMPL + P+F+DLSC F FG    P+ +DPL+ EPC+ QC +S+     S R CHTMPE P
Sbjct:   24 YDTFIVLARGIQLKFPDPADQRAVIAGMLRDALPAWMLHAYRFVSPPSKFSAELNAVMCAILSDWLVGPSTVTTAEVPVAGGG-----TEVWRAAVKVERCRYLEASRCKGACMNLCKVPTETFFREELGMPLTLVPDFDDLSCTFTFGVEPAPLAEDPLVVEPCYYQCPASSAAYARSGRACHTMPELP 208          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: A0A8J9WQB3_9CHLO (Beta-carotene isomerase D27, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQB3_9CHLO)

HSP 1 Score: 163 bits (413), Expect = 3.200e-42
Identity = 81/176 (46.02%), Postives = 113/176 (64.20%), Query Frame = 3
Query:  954 YENYVDLATMLQKGP-PERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWT-QCLSSNKQP 1475
            YE +V+L+  + KG   ++Q++ V GVL S+ PP     +R  FP SK+SA++NAL+    F WLVG  E  +  VD  G       +Q W+S V+I++CRYLE S C G C+N+CK+PTE FF    G+PL M PNFEDLSCE +FGQ A P+E DP+  +PC+  +C  + K+P
Sbjct:   58 YEGFVELSREMMKGRNSKQQQQAVSGVLGSLMPPQAAERFRKWFPVSKWSAEMNALITVLGFKWLVGPLETKEVEVDFNG------EKQKWQSGVQIKKCRYLEQSGCIGMCVNMCKIPTEDFFTNQFGLPLTMNPNFEDLSCEMIFGQRAPPIEQDPVYNQPCFAHECTLAEKEP 227          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: I0YZA4_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZA4_COCSC)

HSP 1 Score: 163 bits (413), Expect = 3.390e-42
Identity = 81/176 (46.02%), Postives = 113/176 (64.20%), Query Frame = 3
Query:  954 YENYVDLATMLQKGP-PERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWT-QCLSSNKQP 1475
            YE +V+L+  + KG   ++Q++ V GVL S+ PP     +R  FP SK+SA+ NAL+    F WLVG  E  +  V+ +G       +Q W+S V+I++CRYLE S C G C+N+CK+PTE FF    G+PL M PNFEDLSCE +FGQ A P+E DPL  +PC+  +C  + K+P
Sbjct:   57 YEGFVELSREMMKGRNSKQQQQAVSGVLGSLMPPQASERFRKWFPVSKWSAETNALITVLGFKWLVGPLETKEVEVEFEG------EKQKWKSGVQIKKCRYLEQSGCIGMCVNMCKIPTEDFFTNQFGLPLTMNPNFEDLSCEMIFGQKAPPIEQDPLYNQPCFAHECTLAEKEP 226          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: A0A2V0P9C6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9C6_9CHLO)

HSP 1 Score: 163 bits (412), Expect = 9.410e-42
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 3
Query:  954 YENYVDLATMLQKGP-PERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQ-QAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWT-QC-LSSNKQP 1475
            YE++V ++  + +G   + QREVV+ VLR++ P   P  +R LFP +++SA+ NAL+    F WLVG+SEL +  V +      GP Q +  RS V I++CRYLE+S C G C N+CK+PT+AFF E+ G+PL M PNFEDLSCE +FGQA  PVE+DP+ ++PC+  QC L+   +P
Sbjct:   86 YEDFVSISKEIMRGRGSDAQREVVREVLRNLMPREAPGAFRRLFPPTQWSAEFNALIASMAFFWLVGESELREADVVV------GPGQVRRQRSVVYIKKCRYLESSGCVGMCTNMCKVPTQAFFTEEFGLPLTMNPNFEDLSCEMIFGQAPPPVEEDPVYQQPCFIPQCSLAKRSEP 257          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: UPI0009E59011 (beta-carotene isomerase D27, chloroplastic-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E59011)

HSP 1 Score: 161 bits (408), Expect = 1.870e-41
Identity = 83/189 (43.92%), Postives = 120/189 (63.49%), Query Frame = 3
Query:  945 QYTYENYVDLATMLQKGPPERQR-EVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQ-CLSSNKQPKVSQRPCHTM 1505
            ++ Y+++VD++  + KG   RQ+ EVV+ VL S+ PP  PA +R LFP +K++A+ NA +  P F WLVG SE+ +  VD       G  Q   RS V I++CRYLE S C G C+N+CK+PT+ FF  + G+PL M PNFED+SCE ++GQA  P E+DP+ ++PC+   C  +N    V    CH +
Sbjct:   74 EWDYDSFVDVSRRVMKGRSRRQQQEVVREVLLSMLPPGAPAQFRKLFPPTKWAAEFNAALTVPFFRWLVGPSEVIEVEVD-------GMKQ---RSGVHIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNFEDMSCEMIYGQAPPPFEEDPVSKQPCYANMCTLANPNSTV----CHKL 248          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: A0A068UXA2_COFCA (D27-like_C domain-containing protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068UXA2_COFCA)

HSP 1 Score: 159 bits (403), Expect = 2.020e-41
Identity = 78/172 (45.35%), Postives = 115/172 (66.86%), Query Frame = 3
Query:  948 YTYENYVDLATMLQKGPPE-RQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQCLS 1460
            Y YE++VD++  + +G    +Q++VV+ VL S+ PP  PA +R LFP ++++ + NA +  P F WLVG SE+ +  V++ GV          RS V+I++CRYLE S C G C+N+CK+PT+ FF ++ G+PL MTPNFED+SCE V+GQA  P EDDP  ++PC+    S
Sbjct:   23 YDYESFVDVSKRVIQGRNRTQQQQVVREVLLSMLPPGAPAQFRKLFPPTRWACEFNATITVPFFDWLVGPSEVVE--VEVNGV--------KQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTDEFGLPLTMTPNFEDMSCEMVYGQAPPPFEDDPASKQPCFADICS 184          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: I6PEW1_CHAGL (Putative D27 family protein n=1 Tax=Chaetosphaeridium globosum TaxID=96477 RepID=I6PEW1_CHAGL)

HSP 1 Score: 162 bits (409), Expect = 2.580e-41
Identity = 84/180 (46.67%), Postives = 118/180 (65.56%), Query Frame = 3
Query:  936 DTGQYT----YENYVDLATMLQKG-PPERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQCLS 1460
            +TG+ T    YE +VD++  + +G  P  Q+  V+ VL S+ PP  PA +R LFP +K SA++NA +  P F WLVG ++L +  V++ GV       + W S VKIE+CRYLE S C G C+N+CK+PT+ FF  + G+PL MTPNFED+SCE V+GQ A PVE+DP  ++PC+    S
Sbjct:   90 ETGKKTRLTGYEGFVDISKRVMQGRSPAEQQASVRRVLLSMLPPEAPASFRKLFPPTKLSAEINAWITVPFFAWLVGPAKLYE--VEVNGV-------KQW-SGVKIEKCRYLENSGCVGMCVNMCKVPTQDFFTNEFGLPLTMTPNFEDMSCEMVYGQLAPPVEEDPAYKQPCFAALCS 259          
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Match: I6PEW2_9VIRI (Putative D27 family protein (Fragment) n=2 Tax=Penium margaritaceum TaxID=102169 RepID=I6PEW2_9VIRI)

HSP 1 Score: 159 bits (402), Expect = 2.780e-41
Identity = 86/186 (46.24%), Postives = 118/186 (63.44%), Query Frame = 3
Query:  954 YENYVDLATMLQKG-PPERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFSAQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERCRYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQAAVPVEDDPLMREPCWTQCLSSNKQPKVSQRPCHTMP 1508
            Y+  VD A  + +G  PE+QR+VV  VL S+ PP  PA +R LFP +K SA++NA +  PLF WLVG ++LT+  V++ GV       + W S VKI +CRYLE+S C G C+N+CKLPT+ FF  D G+PL MTPNFED+SCE VFGQ    + DDP ++     +      +P++ + P  T P
Sbjct:   22 YDALVDAARRVMQGRTPEQQRQVVANVLMSMLPPNAPATFRRLFPPTKLSAEINAAITVPLFQWLVGPAKLTE--VEVNGV-------KQW-SGVKITKCRYLESSGCVGMCVNMCKLPTQDFFTNDFGLPLTMTPNFEDMSCEMVFGQMPPALADDPALQNTXCFKDTCPMAKPELPRCPTLTTP 197          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig127.2004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L107_9PHAE5.710e-10346.19D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
D7FK55_ECTSI1.850e-9675.90D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A835ZB75_9STRA5.660e-5452.11D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A0A8J9WQB3_9CHLO3.200e-4246.02Beta-carotene isomerase D27, chloroplastic n=1 Tax... [more]
I0YZA4_COCSC3.390e-4246.02D27-like_C domain-containing protein n=1 Tax=Cocco... [more]
A0A2V0P9C6_9CHLO9.410e-4247.75D27-like_C domain-containing protein n=1 Tax=Raphi... [more]
UPI0009E590111.870e-4143.92beta-carotene isomerase D27, chloroplastic-like n=... [more]
A0A068UXA2_COFCA2.020e-4145.35D27-like_C domain-containing protein n=1 Tax=Coffe... [more]
I6PEW1_CHAGL2.580e-4146.67Putative D27 family protein n=1 Tax=Chaetosphaerid... [more]
I6PEW2_9VIRI2.780e-4146.24Putative D27 family protein (Fragment) n=2 Tax=Pen... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig127contigF-serratus_M_contig127:440603..459731 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.4
Seed ortholog evalue1e-80
Seed eggNOG ortholog2880.D7FK55
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Domain of unknown function (DUF4033)
EggNOG OGs2CN5C@1,2QTYT@2759
Ec32 ortholog descriptionDomain of unknown function DUF4033
Ec32 orthologEc-04_005770.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2200
Cds size1215
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig127.2004.1prot_F-serratus_M_contig127.2004.1Fucus serratus malepolypeptideF-serratus_M_contig127 441238..459381 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929200.965596-UTR-F-serratus_M_contig127:440602..4412371622929200.965596-UTR-F-serratus_M_contig127:440602..441237Fucus serratus maleUTRF-serratus_M_contig127 440603..441237 -
1690962747.793288-UTR-F-serratus_M_contig127:440602..4412371690962747.793288-UTR-F-serratus_M_contig127:440602..441237Fucus serratus maleUTRF-serratus_M_contig127 440603..441237 -
1622929201.044246-UTR-F-serratus_M_contig127:459381..4597311622929201.044246-UTR-F-serratus_M_contig127:459381..459731Fucus serratus maleUTRF-serratus_M_contig127 459382..459731 -
1690962747.8642256-UTR-F-serratus_M_contig127:459381..4597311690962747.8642256-UTR-F-serratus_M_contig127:459381..459731Fucus serratus maleUTRF-serratus_M_contig127 459382..459731 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929200.975336-CDS-F-serratus_M_contig127:441237..4413661622929200.975336-CDS-F-serratus_M_contig127:441237..441366Fucus serratus maleCDSF-serratus_M_contig127 441238..441366 -
1690962747.8054633-CDS-F-serratus_M_contig127:441237..4413661690962747.8054633-CDS-F-serratus_M_contig127:441237..441366Fucus serratus maleCDSF-serratus_M_contig127 441238..441366 -
1622929200.986309-CDS-F-serratus_M_contig127:441622..4417231622929200.986309-CDS-F-serratus_M_contig127:441622..441723Fucus serratus maleCDSF-serratus_M_contig127 441623..441723 -
1690962747.813758-CDS-F-serratus_M_contig127:441622..4417231690962747.813758-CDS-F-serratus_M_contig127:441622..441723Fucus serratus maleCDSF-serratus_M_contig127 441623..441723 -
1622929200.9966848-CDS-F-serratus_M_contig127:442195..4423431622929200.9966848-CDS-F-serratus_M_contig127:442195..442343Fucus serratus maleCDSF-serratus_M_contig127 442196..442343 -
1690962747.8237555-CDS-F-serratus_M_contig127:442195..4423431690962747.8237555-CDS-F-serratus_M_contig127:442195..442343Fucus serratus maleCDSF-serratus_M_contig127 442196..442343 -
1622929201.0067325-CDS-F-serratus_M_contig127:450532..4506251622929201.0067325-CDS-F-serratus_M_contig127:450532..450625Fucus serratus maleCDSF-serratus_M_contig127 450533..450625 -
1690962747.835521-CDS-F-serratus_M_contig127:450532..4506251690962747.835521-CDS-F-serratus_M_contig127:450532..450625Fucus serratus maleCDSF-serratus_M_contig127 450533..450625 -
1622929201.018799-CDS-F-serratus_M_contig127:451937..4525431622929201.018799-CDS-F-serratus_M_contig127:451937..452543Fucus serratus maleCDSF-serratus_M_contig127 451938..452543 -
1690962747.8454945-CDS-F-serratus_M_contig127:451937..4525431690962747.8454945-CDS-F-serratus_M_contig127:451937..452543Fucus serratus maleCDSF-serratus_M_contig127 451938..452543 -
1622929201.0325196-CDS-F-serratus_M_contig127:459243..4593811622929201.0325196-CDS-F-serratus_M_contig127:459243..459381Fucus serratus maleCDSF-serratus_M_contig127 459244..459381 -
1690962747.8558347-CDS-F-serratus_M_contig127:459243..4593811690962747.8558347-CDS-F-serratus_M_contig127:459243..459381Fucus serratus maleCDSF-serratus_M_contig127 459244..459381 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig127.2004.1

>prot_F-serratus_M_contig127.2004.1 ID=prot_F-serratus_M_contig127.2004.1|Name=mRNA_F-serratus_M_contig127.2004.1|organism=Fucus serratus male|type=polypeptide|length=405bp
MDVNGSDVTDIEKKAALDSRQEGLWKRETGPTIDRPRIETPLDLPQPGKL
LQLPLMGKPDPTVEQLPPRGGCAKANPFAVPDNDYKDSWLDSLWINLFSS
RMSAAVEAEARRVVAGRRPGINSPPPLENPGVVEPPMGLAAAGLEGENVG
DLSKAREAPRLVGISAASGFPKSLEGLKGGVSEGGGIGGSIAQEGDTGQY
TYENYVDLATMLQKGPPERQREVVKGVLRSIFPPWFPAFYRTLFPFSKFS
AQVNALMCPPLFTWLVGKSELTDGVVDLKGVGGAGPSQQAWRSTVKIERC
RYLEASKCKGTCMNLCKLPTEAFFREDLGMPLRMTPNFEDLSCEFVFGQA
AVPVEDDPLMREPCWTQCLSSNKQPKVSQRPCHTMPESPLRDEQQQQQQL
SGSP*
back to top

mRNA from alignment at F-serratus_M_contig127:440603..459731-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig127.2004.1 ID=mRNA_F-serratus_M_contig127.2004.1|Name=mRNA_F-serratus_M_contig127.2004.1|organism=Fucus serratus male|type=mRNA|length=19129bp|location=Sequence derived from alignment at F-serratus_M_contig127:440603..459731- (Fucus serratus male)
GTCACTTTGACGCACCAGCCTCATTGCACATTAGACGAGTGACGCGATGT CGGTGGACACGTAAGCAACAGCGGATTCGGGTGCACCACGTAGACTTTTC TTCCCCGGCAACTCTTGCTCTATTACTGCTGCCGCTGCTATCGAAAACCG GAGCGCGCACTCCGCCAGCTGTGCATGATGTTGGGCCTTTCCCCTCAATA TCAAAGTCTCGAGCGCGACTTGCGCCGGCTTTCGCCTGGAATGCTCCATC GCGGCTACTAAAAAATCAACGTGACATCGCCGGGCTATTCAGCACTTGTA AACCGCAGCCATCTCGTCCTCGAAGCATATCCGCGAGGGGCGTTCAAGCT ATGGACGTCAACGGATCCGATGTCACCGATATCGAAAAGAAAGCGGCACT AGATTCGAGACAAGAGGGACTGTGGAAGCGAGAGACCGGACCAACGATCG ATCGTCCACGGATCGAGACTCCCTTGGACCTTCCCCAGGTTAGGTTACTG TCTGTACCAGAAACAGATGTCTGGAGGACGTAGGTCGGTCTCTTCAAAAC TTGTATGTTTCTCTTGACCCTTGAAGAACAGTTTCAAACTTTCAAACTAA TGGACTTTCGTCAGTCAATGCTTTTGTACATAATGTACTGCTTGTAGACC GTTAGTATGTACCTGAAATGTATGTACTGTATGGTCACACATATAGCAAG AGTACGGATCTACCGGGTAAAGTTGCCAGTCCTGCACGTGGTCAGCTGAA CAAGAAAAATAAACAGTTTCAAACTTTCAAACTAATGGGCTTTCTTCAGT CAATGCTTTTGTACATAATGTACGGTAGACCATTAGTATGTACCTGAAAT ATATGTATGGTCACACATATAGCAAGAGTACGGATCAACCGGGTAAGTTT GCCAGTCCTGCACGTGGTCAGCTGAAACAGGAAAAATAAATATTTCCATG TCCGCGTTCGTGCCTGAGAAGTTGATCTCGCGAGACGGGTTCGGCAATCC TGCCCTGCGTCAGCCTGCTCATCTCCATACTCAGACTGAATCCGGTGCTT ACTTAAGGGATTCCTACCGAGTGCCGCGGCGGCGGCCCTTTATTTCATTT AAAAACCACCATACGCCATCGGGTCAGTCCCGAGTTTATCGGATCACGCA GTTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCACGGGGCCAG AAAACCTCAAGGTAGTTCCGAATGAGAGCTGCCTTGGCAGGTCACCATGG ACCATTAATATTCGCGTCTCTTTCCCACACCCACTATTGGTACGAAGCGG GCATGTTGTAAGTACCGGTGGTATGTATAGTCATCACATAATGCAAGGAT AAGGATCAACCGGGCTTGAGCCAGTGCTCCAGTACATAATGTAGACCGTT AATATGTATGTATGTATGTATAGTCATTACATGTAGCTAGGATAAACGAT CAACCGGGTAAAGTTACCAATCCAGCTCGAGGCCAGCTGAACAGGGAAAA TGAATTTCTCCCTGGTCCCCGTTCGCGCCTCAGAATTTGGTCTCGCGAGA CGGGGTTCGGCAGTCCCGTCCCGCTTCAGCTTGCTCATCTCCATACTCAG GCTGAATATATCACGTATATGAATAGGGCCTAGATGCTCGCCGTTATCTA TAAAGTATATAGTATGTATCATTCGTCGCCCGAGTGGTCTAGTAGGTAAC CTGCACACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTAGGCCCGATC TTATGGATCAGAAAAAACGTTATCGAAAAAAAAAAAAAACTGATAACGAC CACAAAGTCGATCTTATGGATCAGAAAAACGTGTTTTCGGATCACTTTTT TTCGGAGGAAGCGCTTTCGGAGGAAACGTTATCGAAAAATCCGGAAAAAA CGGAGGAAGATGTTATCAGAAAAAAGTTATCAGAAAAATAGTTAGTAGCG ATACGAAGGCGTCTCTCAGACGGATGGACGCAAAAGTTCTAATATATGCC TTTAAACACAGACCTCGTGTATCTTGGAGACAGAGGCATGGATGACTTTG TTGCGGCGGTGACGACCTCGGGGGCAGAATATCCACACCGCAAGCTAAGA ATCAAAAATATCAATCAGTTGGCAGTCGTTCTAGGGTTGCTCGCCGAGGA AGATACAATCGTGTCCCGAGAACAAATCTCTAGTTTTTGCAGCGTGCGTC GTGCAGCAGTTGACGTCCTCGGTACAGTACATATTGCACAGCCGTACTGC ACAGTCGTACTCTTTGCATGGCACGTTGCGGCCTTCGAGCTGCGTTCGTG TGGTTGTGCAAGGAAATGGTTAAAGATCACGTACTGTACCACGCCACAGT AGGTGCACAATATAATGTGCCTATCCGCAGGAGTAGTCCTTCGCTATGTG AAGTGGGCGAAGGCGTGCCGGACGGACGGACGCAAAAAAAGTTCAAATCT GCCTTCAAACACAGACCTCGTGTAGGTTGGAGACAGGCATGGGTGACTGT GACGCAGCGGTGACGGTCGCAATGGCAGCATGTCGACGCTGCAAGCAGAG AATAAAAAATATCAATCAGTTGGCACTCGTTCTAGGCCTGCTCCACGTGG AAGATGCAATCGAGTCCCGAGAACACATTTTCTATCTGTAGCCTTTGCAA CGTGCGTCGTATACAGCAGTCACGTCCTCGGTGCAGATTATATGTTTATA GAAAAACTAGAACGCGCCTAGACCTTCTGAGATATTGCACAGACAGATCT GTTTGCATTGTACGTTGCGGCCTTAGAGCTTCATTCGTGTGGTTGTGTAA GTCCGAAACGATCGAAGACCACCTGCTGTACCACGCAACGGTTGTAAGAA GGTGCACAAGCATGGCAATGAGCCTGCTCGCAGCAGTCCTTCGCGACTTT TGCTGTGGGTGACAGCATTATCTAAAACATACAGTAGACTGTGTACCAGG TTATACGTTATGAACAGAATCTCCAGTAGAGTACAACTTGCAGTCGCCGA GATTCATCGGCTTTGAAATACATTTGTGCTACTTACAACCGTGGCGTGGC ACAGGACATGATCTTCAATCGTGGGGAGCTTACACAACCACACGAATACA GCTGGCCGCGGCCGCACCGTACCATGCAAACATACCAGTACGGAAGAGCA TTCGACACAAAAAAAAAATAGGACCATAGTCCCAGGTCCTAATACATCAG GACTGTCAGAATCAATATTTTCCGATAATGTTTTTTTCTGTCCCATAAAT CACGTCGCATCGGTGTTCTCATCAGAAATTTTCTTATCAGAAAAAAAAGT TTTTCGATAACGTTTTTTCTGATCCATAAGATCGGGCCTTAGCTTAAGCA GAATTTGTGTTCTTTCTTTCGTAACGGAAAGCGTGGGAACGTGAGTAAGT AAAATTCAACCATTGGTTGAAGAGTTGTAAGAGCGCTGAACTTGCATCGC GATAAAAATTGCAAGGCGTGAACCGGGGAGAGATGGGAAGATCCTTTGTG ACCACAGGCAGGATGGTAATTAGAGGTCCATCGGCTATAAGTGTGATTAA AAAAAAAAATCGCGGAAAGCGGGAGAAAGGAGAGGAACCTGTGAGTAAGC CCAGGATTAAGCGTGGGTGTGGAGAATGAGCGGGCTGGCGCGAGACGGGA CAGCCGAACCTGTCTCGCGAGACCAAATTCTCAGGCGCGAACGTGGACAC GGAAATACTCATTTCCTCTGTTCAGCTTACCACTACCTATCAACTTTCAG GACTGGCAACCAGTTGATGCCCGATCCGATACACCTCGAGTCCATGCGAT GACCATATATACATCCATCTGAAAAAGGACACGCTTTTCGTACGTGTGCT TCATTAGCCCTGGATTCTAATTATAGATGCGTGTTTATAAAGAGTTGGGA ACTTAGGCTGTAACAACAAAAACTTTTCGTGTACATAAGAAGGTCAACAT TATAATATCGGGAAGAAACCCACCATTATACTGCCTTGTACACACAAAAT TCGTCTTCATGGTCGAGGAGGGAAAGGAACGGCTGAATCCTTCTCGTGAT AAAATTTAAGGCACGCACCGCAGAAGGAAGGCGGATGAGAAATCCTGTGT GACGTTCCTCTTGTGTGACCCCGGGTGGTACTCTAAACGAACTTGATGTC CAGAATAAATGGGAAGAAAATACACAGACACACACTTACTATCATCGCCA TGGAGGTAAACCAAAATAATATCTAGTAGTTGTCGATGTCTGCTATCGTC GTAACTCAAATGACCTTTGTTTCTCCTATGATTTTATAATGGTAGAGCTA ATCCCTCACTCCCCATAGACCCACTTTCATAAATTAATAATGTATCAGTC CCTAAAGGCATGTTGTAATTCTGAAGTCTTTCATCGAAATAACACATTTA AACAATGCTACATAGACTTGATCATTGTTTACACAAATACTTGGATTATA TATCAGTCTCAAGAGCCTGTTGAAGCCCTCACATCTACTATTAATAGGTG TAGATCCCCTCCGTCGTACGTATTTTTTTCAAACAACAAAAGCTTTTATC ATTTCTATGACTCATCATATCACTATAGACACCGGTACTTTCGACATGCC CACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCATATTAATTGGTCC ATGGTAACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTACT GGCCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAATTG CGTGACCCTATAAACTCGGGACTGACCCGATGGCACAGTATGGCGGTCTA AATAAATAGATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAA GCACCAGATTCAGTCTGAGTATGGAGATGAGCAGGCTGATGCGGGACGGG ACTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGCAGACA GGGAAATATTATTTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAAC CTTACCTGGTTGATCCATACTCTTGCTATATGTGTGACCACACATACATA TGCCTCTAGGAGTTCAGTCCACGATGCAGGAGCTGACAGCTGCCATCCGC TCGTTGGCGAACGGAAAGGCTGTCAGACCGGGCGGAACCTTCGTTCAGCT GCTCAAGATCACCCCCAACGGCGATCCCGCCCTGCGCCGGAGACTGCTCG ATATCGTCATTCATATTTGGAGGGGGGGGCGACTACAGGGGCATCTCGCT GGTAGCGCACGCCGGAAAGATACTGCTGAAGATCATCGCTCGCCGCCTCA GCGGGTACTGCGAGCGCGTGGGGGTCCTGCTGGAGGAACAGAGTGGTTTC CGACCGAACCATTCTACCACCGATATGATTGGGATTCGTCGGTTACAGGA GCTGGCGCGGAAGAGACGAATTCCGCTGTATGTATGCTTTATCGACCTTA CCATAGCGTACGACTCCGTTGATCGAACCCTTCTCTGGAAAGTGCTCGCC CGTTTTGGCGTGCTACAGAATATGATCTCGGGCATTCGTCATTTCCACGA TAGCATGCGAGCAAGCGTGCGGATCGACAAAAGGATGTGCTCGGGGTGGT TCGCTGTGGAACAAGCCCTTCGTCAAGGGTGCGTGCTCGCGCCCCTCCTG TTCAGCATGTTCTTCGCGGCGGTTATAAACGTGGCCTCCACGCGTTTCAA GGCGGACAAAGACATCATGGACGTTTTGGTACACCCGAGGAAGAAAATGG GGGCGGGAGGGCGGGGGCAAGCAACTGCCGGAGAGTCAGTCCTCGCGACG CCGCTTTGGGGTATGCTTTACGCTGACGATGCCGGGGTCGTCTAGCACTC ACCCGAGCAGCTGAGGAAGATGATGGGAGTGATCGTGGTCGTGTGCTCGG CGTTTGGCCTGTATTAGAGGCCAAGACTGGGATCGTGTATTTACGCGCGA AGGGTATGCCAGAATTCACCTCCTTATTCAGCGTAGAGGCAGCGGGCCAG GTGTACAACGAGACGAACGAGTTTGTATACCTCGGGGAGAACGTCAACCG CAATACCGACCTGTCCATCGAGGTCGACCGGCCCATATGCAACGCATGGT GCAGCTTCCGGAAATATACCCTCGAACTGTACGACCGACCGAGTGCTCCT CTCGAGCTCAAAACCCGGATGCTAAGAGCCGAGGTACACGAGATAATGCT GTACGGCTGCGTCACGTGGAGCCCGCGCGCGTGCCACCACGGCACGCTGC GCCGAGCCCACCACAGGTTCTTGACTCGCTGCATCCGTTGGCGAAAGCAC AATCGCGCCGACCACCCGATTTCCTATCTGGGCACGCTTATCAAGACGGG AATTGAGAGCATCGAGGCGACTTTACGCAGGAGGCGGATCTTGTTTGTGG TATTTGTGGCGCGCATGGAGGATACGAGACTGCCGAAGTGCGTGATGTTC GGAGAATTGGTGAGGGGCGCGGGCTGTGTGGGGGGTCAGGAAAAAGAGTG GATGGGGTGTTTCCTGGACGACCTCAGAGCTTTCGGCATCAACGCTGACC AGTGGACGACTGCGGCCCAGGACGAGGGTAATGGCGCAGAACGGTGGAAC AAGGGGCGGAACATTTCATGGCGAAATGGATCGCTGCAGCAGGAAGCCAG GGCTGGACTACGGCATGCAGTCGTATGCCCGAACATGACGGGAAGGACCA AGGAGAGGATAGCCCAAAGCAAGCGGGCTCGTGCTGGTTCGGTCGCCCTT GTTAACCAGCCACAAGCGGCGCGAACTTGTATACTCTCCAGCAGACTCCA GTACCAGCAGTTCCCAGCAGACCTTATACGGGACTGATCACAACTTGAGA CAGCTTGGGTTGGTATTTTATGATTGATTCCAGAAAATGGATGAAAATGT CTCCAACCGCTGGTACAGGTCTAACTACCTGCACTTTGCCCCCGATATCC TTCGCATTTCTGCGAGCGCGTGTCAGCCATCGTTAGCGACTATCTACCGT ACCCTCAAGTGACGAGAAGTACTGTACCCTCAAGCGTACGACATCGTTAG CGGCTACCTAACGAACAGCCAGCTCAAAGATGAACATGTATTCACTCCTC CCGAACCCCGACCGACAACCTCCATCCCTCCGCGCCCCCCTTTTAAAATG CTGAAATCTCTGAACGTTTTTAAACGGCGTGCGTCCAGCCCGGGAAGTTG CTCCAGCTCCCCCTGATGGGAAAGCCCGACCCCACGGTGGAACAACTCCC TCCCCGTGGAGGCTGCGCAAAGGCGAACCCCTTCGCGGTGCCGGACAATG ACTACAAGGACTCCTGGCTGGACTCTCTGTGGATAAACCTCTTCAGCAGC CGGATGTCCGCTGCCGTCGAGGCCGAAGCTCGGAGGGTAGTGGCGGGTAG ACGCCCCGGCATCAACTCCCCTCCCCCTTTGGAAAATCCCGGTGTTGTTG AGCCGCCGATGGGCTTGGCCGCGGCAGGGCTTGAAGGAGAAAACGTGGGG GATCTCTCGAAGGCGCGCGAGGCGCCACGATTAGTAGGAATATCAGCTGC GTCTGGGTTTCCAAAGAGCCTGGAAGGTCTCAAGGGGGGGGTCTCCGAGG GAGGCGGGATAGGAGGCTCGATCGCGCAGGAGGGTGACACGGGTCAGTAC ACCTACGAGAATTACGTGGACCTGGCGACGATGCTGCAGAAAGGACCACC CGAGCGGCAGAGGGAGGTGGTGAAAGGCGTGCTGCGGTCCATTTTCCCGC CCTGGTTTCCTGCGTTCTACCGAACCCTGTTCCCGTTCAGCAAGGTGAGG GTGGGCACGTTGTTGTTTTTTTAATGTTGTTCAACAGGGTGCCTTTCGTC TAGACTGCAGTATGGTAATAGCATGGATAGTCGGAGGGTTTCGATATCTT ATAGCATTACTATGCCCTCGATTCTCGAAACGCAGTCGTAAGTTGACGGC GTTTGTTCCCGGAGAATGGTGTTCACGCTTATACTAAATGCTTGTAGATT GGTCGCCAAATATCGCGGACAGCAAGAAGAAAAGAAAAAAGGTGGTGGAG ATTCGAGATATAATCTCGCCGAGATTTTTCTTTGAAGGGGACATTATTCT AAGATGTGAATACATAACTGTACTTGTAGTAGTAGTTGGTTACAGAGGCG GTCGGCGTTTCCCGTTATGTGTTGCGCTATTTTGGTGCTATTGATGCATT TGATAAACAAGAACCAGATTCAGCCTGATGAGTGCGGAGATTGAGCGGCC TGACGCGGGACGGGACGGCCGAACATGTCTCCGTAGACCACATTCTCGGT TGCTAACAACAGGGGCAGGGAAGGGAAAAAGAAAAATCCCTGTTCAGCTT ACCACGAGCAGGATTGGCAACCTTACCCGGTTGATGATTAATACTCTGCT CGACGTGATGGCCGTGCATACATCATTTTACATACATACATACATATGTT ATATGTTGTACGTTGTCATCTTCGGCGAATCTATCAAACATGATGCTGAC ATGCTCTGGGAGGGGAGGGGACGTTGTCGAAATCGTGTCTTGACGTTTCG ATCCTGTAGTATCACGCCAGTATTAATAGTAAAAATGAACAGCATCAGCC GCAGCCGCGTGAGCAGCCGATGTTTTGAGCTGACGTGTTCGGACGAGAAG GCTAGTCCGCCTTACTTCTTCGCTCCCATCTCTCTCGGCGGAGTCGGTTG TAAGGATCGCTCATTCAGATGGAATAGCAAGCAGCTAGAAACATGTGCGA CTCCTCTGAGCGGATTTAATCATCATCACTCCGTAACTCCCCACCCCCTC CCCTCCGCCCTCCGTTGTCACCGGTTGGACGACCCTGGCTCGGCGTATCT TTAGCGCCTTTCGTTGTCATCGTCATACCCATCGTTATGGTGTGTGTGTG AGTTTATCAAATGTTTGGTGTGTGTGCGTATTTGAACTAAATTGCACATA AATGTGTAATCCGGCTCTGTCATTCTAACTCTATTATATAGTCATATAGT CACGATATGCTACCAAAACTGTACCGCATTGGTCCTATTAATATTAATAC TAATAATATCAAGGGGTGGCCTATGATACTCATGTGGACGATTTTATTCC TGTCAGTTTTCCGCTCAGGTGAACGCGCTCATGTGTCCGCCGCTCTTCAC GTGGCTGGTGGGGAAGTCGGAGCTAACGGACGGCGTCGTCGATCTTAAGG TGCTCCTTAAATGTAAAAATACTTTCCGATTTGGATATTTAATGTAAATA AACTAGAATCTACGCGTCCGTTTGTTTACACCCCCCCCCCCCCCCCCCCC CCGAAAGAAAGGCCTTGGGGAAAAAAGGACTACTTGTGCGAAATAAATAA ATGAAAACGACATCCATGTCTTCAAGACTTCCGCACGCGAAAAGGGGTGT GCTTGCGGACGCGTTGATTGAGCGCCCAGTCGCGCCTCGCCGTCTTGGTG CATCGCGATTATTATTTAATTATTTTTAATTATTATTATTGTTATTACTT AAAAATATTTTTATTATTATTACTATTATTATTATTATTATTATTATTGT TATTACTATCATTATTATTAGTAGTTTTATTGCTATTATTACTACTACTA TTATTATTATTATTATTATTATTATTATTATTACTGTTATTAACAGTATA CGAGGGGTCCGGAGGTGGGGGCCTCACGGCCCCCTCGTCCTCAGTTGTGG GAAATGCTCTGGTTGTGATTGATGATGGTATAGAGAGTGTGAACGTGAAG AGTCACCAAGGGGCACTCCCTCAGTACGGAGGGCAAACCGTGAACCGGGA GATAGTATTCGGTGCAAATTTGTACATGGTCGAGTAGTTCTGGTCAGATA GTACGGGATAAAATGGTTGGCGTCATCTCCCGCGGATGATGTATGAAGTT GTGCGATGCGGGAGGTTGTCGGTTTGTAAGGACAACTTTTCGTTGATGAT CTCCCTAAAAATGCACACGCAAACACCTGGAGTAGACGTTCGCTTTGAAC GTTATAAGGGCAACACAACGATGGCGTCACGACAAACAGGACGCTACGAT GCGTTTCGATACAAAAGAGAAATATCCCGTCGATCCTATTGCCCACAGAA ATGGACATGCAGACACGTGGGGTAGACGTACGCTGTGAATGGTACAGCGA CAACGGGAACACAAACAGTACGCAACAATGTAGAAGAAGAACGCTAAATG TGTATGAACACCAAATAGCAATATACCGTCGATCCGACAATGCACACGCA GACACAGACGTCCACGTGAAAGGTGCAGCGATAACGTGACCACAAAAATC CTCACGACGTGTGTAAAAATGGAAGAGAGAAGTATACCGTCGACTTGTTC ATGCCAACAAAACAAATATGAAATACCTCCGCAAAACGCACACGGAAGTT GAGAATGGAACGGCGACAACTTTACTACAGATCGCTACGATGTGTATGAA TGCAAGAGAGAAGTATACCGTCGACCTTGTTCATGCTTGTCCCAAGAAAT GTACATTCAGACATGTGGGGTAGACGCACGCTGTAAAGGGTATAGCGGCA ACGCGACTACAAACATTACGCCCCACTATGAGTTGCAGATATTTTATCGT AATAACAACAATGAACAACACCAAACCCCATTTTTAATTTAATTCTCTAT AGAATGTTACTGTACCGTCGTCTAGAACTCTTATACCGTACATACTGTAC AGTAGGCCCGTTGTAATTCGAGACCTCCCAGATAGTTCATAGTATACCCG TAGGTATATTCTATCGTAAAAGTATGACCCCTAACGTAAGTTTTATAGTA TAATGAGTAACATATCCACGAATTATCCTCTTGACCTTATTGTATGTAAC TAAGCCTTCAGACACCTATTTTCATAGATGTATACGTCAGCTGGCATGCT GTAAATTTGAGGTCCTTCACATCCATGACCTGTAGACCTAGAATGCCCTT GAAATACCCACATCAAACCCTATTTTAAAATTAATTTCTCTATAGAATTA TTACTGTACCTCTTAGTACAAAAATACTGTATAATAACTAGTCTGCTTCT GTTTTGGTGTCCCTACATGGTGTTTACTGTAAGTGTACAGTGTAACGGTG GGCTTCTCGCCGATATTATACTGTTGACCCTAGGTGACTCCATTGGGGAA CCCTTTTAATACCATGTAGAGTTTTTGTCCCTACAGCCAATGTTCCCACC TGAACCTTTTGATCAATTCGAAGGTTTAGATTTAATTTCTCTATAGAATT ATTACTGTACCTTAGTCCAGAACTCTTAGTCCAAAAATACTGTATAATTA CTAGTCTGCTTCTGTTTTGGTGTCCCTTCATGGTGATTAATGTAAGTGTA CAGTGTAACGGTCGGCTTCTCCCCGATATTATACTGTTGACCCAATGTGA CTCCATTGGGGAACCCTTTTAATACCACGTAGAGTTTTCGTCCATACAGC CAATGTTCAGATTTTTACTGTATAATAACTAGTCTGCTTCTGTTTTGGTG TCCCTACATAGTGATTTTGTAAGTGTGCAGTGTAACGGTAGGCTTCTCCC GATATCATACTGTTGACCCTATGTGACTCCATTGGGGAACCCATTTAATA CCATGTAGAGTTTTTGTCCCTACAGCCAATGTTCCCACCTAAACCTTTTG ACTATTTACAATTGGAAGGTTCAGATGCGTTCAGATTTTTCTTTAAATAT TTATGATGTAGTTGACTGCCTGCTGCGGATCTCTGAGCTCAGATCTGCGG TAGACCTCTGAAAGATGCAGATTTGCAGGGATAAAGCAAGCTCTCCACAT CTAGATCTGAAGCTCACGCGTAAGAGCTAACCTCGGCGCGTGACTTGCAA GGGTGGCTCGACAGATTAATACAATCCGGTAGGCGAAGACGGCCGAAAAA ACGGTTTAAACGTGAGGTGCGCTCCAAACGTCTTGCTTTGAGTAGGGGAT GGAGCGAACAATGGTTGAACTCTGCGCTCTGAGCGCCTCAGATCCAAAGA TTAAGTTTGGGAATAATATAACTTACCTCTATTATTAGCATTATTATTGC TGTTATTACTATTATTATTATTATTAAACAAATTCGGAAATCCGTTCCGA GAAACGTAGATTTAGCAGTAACGAATTCCCAATAAGTAAATTTCCTGGAA ACTTTCCGCAGGCAAAAATTTCCATATTTAGCGTGGCTCACAATGATTGG CTGTTTGGCGACAGTGCTCCTTATTTTGAAAATGGACAGCTGAAGCAGAA GAACCCGGGCAAAGTCGTAGGGGGCAGTTGCTCACGAAACTCACGGTCGT GAGGGCAAAGGGTCTGTCCGCCATGTCGCGCCTACGCATTCGCAACAGAA TAGAGCGCAAGACGCGAGCTTTGGTCATGCTTCAGTGCCGCTCTCTCTTC GAAGCCTACTCCGAGATGTGGTTCGCGTACCACTGGGCGTTCATGGGCCG TCTGGAGAAAGATGACACGCCAAGTGTTACGAGGAGAGATGTGACTGCAT TCTTCAGCCCTCAGGACTGCGTCAACTTTCTGCGGTTCACGCAATCACAG GTGCAGTAGCGTCCCTCTGTGCGTGGGTGGGTGCCTATAGCAAGAACTTG CAACAGCAGTACATAGTGTGCTGTAAGGGCTGCTGCACACGACCTCTGCG GCAGAGCGTTGGAAGCACCTCGGTCTTGCATTGCCGAGAGATGGCTTGAA CCAATCGTGCTGTGTGCTTGAACGAAAGACGAAAATCCGACTCGGCTCTG TTTCCGAGCGACCTCCGCAGACTGCACTTGGTCGCGGGCTACCTCTAGTG CCTTCTGACTGGGTGTTATCTCTCGCCTTGAGCGGTCGGCCATGTTCTTC GTGCAGATCGGGCGTGTGGGTCTTAAATATAGAAGCGTATGGAGTTTTCC TAAAATGAGTCCCAGGCTCGGCTGTTTGCTAAATCTAACTCGTGTTGTTG CGGAAAAATGGCGGGACTGTCAGGATCGTTCCCCAGACCGGCGGCTTAAC GTTAAAAGTACGTCCTTAAATATGAAAAAAAATGTTTCCGAAACTGTCTA TTATTATTATTATTATTGTTATTAGACAGTTTCGAATCGGATTTTTTCCG GATTTAAGGGATTATATTTAGCCTTAAGCCACCGTTCTGCGGAACGATCC TGACAGTCCCGTCATTTTCAAGTTTAGTGCCTCTCAAATTTAACAATTAG GCAGGCTGACGGAGCAGTTTACGGAAAATTCCATATTTTTCTAGATTGAA GACGACAAGTCAAAGGAACATGTCTGGGCGGTCGAAGAGAGCCCCAGCAC CCAGCCAAAAGGCCCTGGAGGCCGCTGAGGACCATCAGCAGACCAGGGGC GTGGCGCAGACCAAGGATCGTGGCATCCGTTTGCGTCTTGCGCGTGTTTT TGTGGACTGCTTGTTCGGGGAATGTGCAAGGGAATTTTTTCGCAGCTGTT GCAGCTGCATGCGTCTGAGGACGGGCGTTCCGTCGTTTTTTTGTCAAGTA CAGGCACTGCAAAAATCATCGTGGCATCCGTTTGCGTCTTGCGCGCCTTG CGCGTGTTTTAGTGGACTACTTGTTCGGGGGTTGGGCAAGGGAAAACTTT CGCAGCTGTTGCAGCTGCATGCATTCAAGGACGGGCGTGCCGTCGTTTTT TTGTAAAGTAGTACAGCCACTGCAAGAATCATCGTGGCATCCGTTTGCGT CTTGCGCGTGTTTTTGTGGTGCTGAAGCATGACTAAAGCTCGTGACTTGC GCGCTATTCTATCGCGAATGCGTAGGCGCGACATGACGGCCTGAACTTTA TACCCTCGCCAGCGTGAGTGCTGGGAAGGACCGGTCTCACACCGCGGCCG TTAGGCTCAGCTCGTTCGGGTGCCTAATTTTTATTTTCAAATTTAAGAGG GGCACTGTCACGCAACCGCCAATCACATGAGCCACCTTAAAACTGCAAAT ATTTGCCTAGAGGAAGTTTCCAGGAAATTCCTTAAATTCCAATTCCTTAT CCTTAAATCTCCACAATTTGGAGCTCCGACTCGAAACTGGTTATTACTAT TATTAGTAGTAGTAGTATTATTACCATTAGACTACCATCATCATTATTAT AATTATTTTCATCAATATTATTATTATTATCATTTTTATTATTAAACAAA TTCGGAAATCCGTTCCGAGAAACGTAGATTTAGCAGTAACGAATTCCCAA TAAGTAAATTTCCTGGAAACTTTCCGCAGGTAAAAATTTCCATATTTAGC GTGGCTCACAATGATTGGCTGTTTGGCGACAGTGCTCCTTATTTTGAAAA TGGACAGCGGAAGCAGAAGAACCCGGGCAAAGTCGTAGGGGGCAGTTGCT CACGAAACTCACGGTCGTGAGGGCAAAGGGTCTGTCCGCCATGTCGCGCC TACGCATTCGCAACAGAATAGCGCGCAAGACGCGAGCTTTGGTCATGCTT CAGTGCCGCTCTCTCTTCGAAGCCTATTCCGAGATGTGGTTCGCGTACGA CTTGGCGTTCATGGGCCGTCTGGGTAAGAGGAGAGATGTGACTGCATTCT TCAGCCCTCAGGACTGCGTCAACTTTCTGCGGTTCACGCAATCACAGGTG CAGTAGCCTCCCTCTGTGCGTGGGTGGGTGCCTATAGCAAGAACTTGCAA CAGCAGTACATAGTGTGCTGTAAGGGCTGCTGCACACGACCTCTGCGGCA GAGCGTTGGAAGCACCTCGGTCTTGCATTGCCGAGAGATGGCTTGAACCA ATCGTGCTGTGTGCTTGAACGAAAGACGAAAATCCGACTCGGCTCTGTTT CCGAGCGACCTCCGCAGACTGCACTTGGTCGCGGGCTACCTCTAGTGCCT TCTGACTGGGTGTTATCTCTCGCCTTGAGCGGTCGGCCATGTTCTTCGTG CAGATCGGGCGTGTGGGTCTTAAATATAGAAGCGTATGGAGTTTTCCTTA AAATGAGTCCCAGGCTCGGCTGTTTGCTAAATCTAACTCGTGTTGTTGCG GAAAAATGGCGGGACTGTCAGGATCGTTCCCCAGACCGGCGGCTTAACGT TAAAAGTACGTCCTTAAATATGAAAAAAAATGTTTCCGAAACTGTCTATT ATCATTTGTTTTTGTTATTACTATAATTATTATTAGTATTATTAGTAGTA GTAGTATTAGTATTAGTATTATTATTATTATTATTATTATTTCTATTATT ACTAGTATTAGTATTATTATTATTATTTATTATTATTATTATTACCATTA TTATTTGTATTATTATTATTTTAAAGAAAAATCAGAACGCACCTAGACCT TCTGATCCGCCCCCGGTAGTGGGGAAAAAGTCAAAACGTTTAGGTGGGAT CAAAGGCTGCAAATACAAAACCTCTTCATGACATTCAAACGGGTTCCCCA ATGCAGATAACATTGGGTCAACAGTATAATGTCGGGGGGAAACCCACCGT TATACTGTACTCTTACATTAATTGCCATGCAGGGACACCAGAAAAACAGC AAAGACAAAACAGTACATCATCAAACAATAAAGACGAATCCAATACAACA TTGAAACGGGAACAGAAGACCATGGTGATGTGGAATCTTCATATCCAAGT TCACGCCACCGTTGACTTGGAATTAGCCGAAGAGCAGTGGGAGATCACAC AAGGAAGTGAGAGGCGAGCGGAAAGAACTGGGTTCCTCGCTCAATACTTG TCAGAGCTATGACACACAGGTGCTCCTCATACATGGACTTAGCGATTGCC CCGCGGTGACCAAAAACAACAAGAGGAAGAAGCATCTCTCTGTCAAAATG ACTAAGTACGCCTCACAACAACCGTGTGCAATCTTCCCATCGAGGGTCCA TTATCTTCAAGACCCCGTCATTGTTCCGATCTGTCGTGCGTCATACATCA CCACCAGCTAGCTCTATCGCTCGTTCCTCGAATCTTCTCGATGCAGAGCG GGACTGTTTCATTGTATTTTGGTTTCAGTAAAATTATCTAATTAGTTAGT CGGGAAAAATTATTGTCTCAGCCACTTGACACTATTTTTTAACGATCTAG AGAGGGTTTTTATACAGGATAATAAAGAAGAACACACAACCACTATCCGC AGCGAGGCTGAGAGGGCCATAAGCCACACTCTACTAGTATGCCACCCCTT AACCGAAGTCATGGGCGTCCAGCACTACAGATCTTACCAAGCATTGCTCT TGGGCGCGCGTTGGTCGCTTGTCGTGTTTGAAGAAAAATCAGAACGCACC TAGACCTTCTGATCCGCCCCCGGTAGGGGGAAAAAATCAAAACGTTTAGG TGGAATTAAAGGCTGCAAATACAAAACCTCTTCATGGCATTTAAACGGGT TATTGTTGTTATAACTATTATTATTGTTATTGTTGTTATTTTATTATTAT TATTATTACTATTATTATTAATATTATTATTATGTCTGCATTTTCTTCCG GCCACCGAAAAACGGCAGCAGGCGGTAGCCGCAACTCCAGTGCCTCGAGC GTTTTTTACTGTGTGACGTACGATACGATGGACGTGCTAATAATACCAGT ATAATATAAAAATTATGCCCTTCGTAGATTAGAAGTTCGCTTTGCTCGCA ATAATATACCGGTATTAGTGTCAACATTAATTGCACCAAGTATCACGTAT CCAGTAGTATCATAGATCAGAAATGGTATGGTTAGAGGGTACAGTTTGCT TGTTTTGGAGAAAACAGTAGGCATGAGTACTCTAGTTTGAGGTATGTCTG AAGCTGTCTATGGTTTGGGGCTGCTTTGTTTTTATGTAAGGTATAGAAGC TGTCTATATTAAGGGACACGGTGCAGTCGGGGGGGAGTTCAGAGCATTTT TCCGGGGCAAAGGAATGCGATTTGCACACACATATAGACACCATATAGTT TCATCAAAGTAGCACTTTTTAGCATAAGATATAGAAGCTGTTTCTATTAA GGGACACAGTGCGGCCGGGGGAGAGGGGGGTTCAAAGCATTTTTTCGGGG CAAAGAAATGCGATTTGCACACACGTAAGACACGACATAGGAGCATCAAA ATAGCACTTTTTAGCTACAGTATACTTCCCAGGCATGCTACGCATACATA GTAAAAATATAATTCGGACTGGGGGAGGGAGGGAGTACGATACCTGGCTA TCTCGTTAGGCTGTACAAAACTATCTATAACATATTCCGCCGTGATGGGT GTCGGGATCAGAGCGCGGAAGATAGCGCTGGCTATAGGGTTAGCGTGACC TCGAGGCGAGATCGCGGGTTCAATCGAATCCCCCCTCCTCCCTCCCCCAA ATGTTCACATCCTTCGCTTCTTATCTTTTATCACCCAGTGGGGGTTCTCT TTCTCATTCTGGCGGCGTGTTTGCGATGCCCGGCGCAGGGTGTCGGCGGG GCGGGTCCGAGCCAGCAGGCCTGGAGAAGCACCGTCAAGATCGAGCGATG CCGCTATTTGGAGGCGAGCAAGTGCAAGGGCACGTGCATGAACCTCTGCA AGCTCCCGACGGAAGCGTTCTTCCGGGAGGACTTAGGTGTGTATGCGTGT GTGTGTGTGTGTGTGTTTGTATGTGTTTGTACATGTTTGTTACAGCGGTT GTGGTGATTTGGCTGGCCAATCTCCTCCCCACGCGACCTTCGTCCTCCCT CCAGAACACTGAAACGAGCAAACAAAAAGTCGCGAGCACCCCTCTCCCCC CGACCACCTCCACCGCCGTAAGCATATCGGGTACCGCATCGCGTACCGTA TGGCTACTACTGCTGTGTGTAACGTTGCGTGTTGTTGTGTTACCAGGTAT TGTGTGATACGTGTGTGATACGGTCGCGGGAGACGGAGTTATATTGAGAA CCCTCGACTATTATAGCGTAAGCTTAGCTCGTGCTCTCTTTCACTGCTGT CTGGCGCGTGAACCGGTGTTTTTGGTTGTTGTATCTATTTCTATGTATCT CTAAGCCTTTTTCTGTCATTCTCTAATGGGTTCCTTCTCTTGGATGGGGG GAGGGAAGGTATGCCGCTGCGGATGACCCCCAACTTCGAAGACCTGTCCT GCGAGTTCGTCTTCGGGCAAGCGGCAGTTCCGGTTGAAGATGATCCGCTC ATGCGGGAGGTGAGAATGGGCGGGCGGAGCTCGCTCACTCTGTCTCACTA AAAACTCTATTATAACTCGATACATTATTGCGCTTTGTCGGTCCGTCCTT TATCTGGGGAAAAAGAAAAGAAAGGTTCGATCCAATATCTGTTCATATAT GTCAGAGATACTTTCGAAGCCCCTCAATACCCCCAACCCCCCCCCCCGTC CCGCCCCTTGGCCCCTCCCCTCCTTATCTCTTGGCATCCCTTGGGGTGAA ACGTCCCCCGCACAGCCCTGTTGGACGCAATGTCTCAGCTCCAACAAGCA GCCGAAAGTCTCGCAGAGGCCGTGTCACACCATGCCGGAATCGCCTCTCA GGGACGAGCAGCAGCAGCAACAGCAGCTCTCGGGCTCACCGTAGGCCTTG ATCCACGCGGGCAGAACCGCCTCCACCGCTCAATGGCCGACGGCGGGCAA GTCTGTCCGTTTTTGTTGTACAGTTTGCCTGTAATGTCAATAGTAGTACA TGACATCGAGGGGCGTGTAGGCAAGACTATGGCGGCGATCCACCAGCAAT TGGGATTTCGAACACCCCTAGTAGAGCGTAAGCATGCCTCAAATTTTGCT GGGAAACCCGTCCTCCTTTGCGACGCCGGGTTGGAGTCGACCTTTGTCTT CGTTAAGGTCTCGACATACGAGCCGAAACCCAACCCGCGCTCCACCACTA CTAATACCAAGACCACTGTACTAATAATAGTAATACTCCCTCTGAGATAT GCAGAACTTGGATCGGTTTCTGTCGACAAAGTCTTGAGGTCCGCTGCGAG GTAGGCGGCACGCGGAGGCCGTTCTGACACTTGCAACCACGATTACGCCC CTGTACGGGCGGCACTTAAACTTTCTTATTTTTCTCTTGTCTCTGCTGCG TGACGCGATCGCCAAGAGCCACAGTAGGTGTCGTTTTTATGTAGATACCA AGGGGTGAAATGGTGCCAAGTGGGGGGGAGGCCTGCTCGCTCTCGTGGGA GCGCTTGATTGGGGAATGTTTTGGACGAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig127:440603..459731-

>mRNA_F-serratus_M_contig127.2004.1 ID=mRNA_F-serratus_M_contig127.2004.1|Name=mRNA_F-serratus_M_contig127.2004.1|organism=Fucus serratus male|type=CDS|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig127:440603..459731- (Fucus serratus male)
ATGGACGTCAACGGATCCGATGTCACCGATATCGAAAAGAAAGCGGCACT
AGATTCGAGACAAGAGGGACTGTGGAAGCGAGAGACCGGACCAACGATCG
ATCGTCCACGGATCGAGACTCCCTTGGACCTTCCCCAGATGGACGTCAAC
GGATCCGATGTCACCGATATCGAAAAGAAAGCGGCACTAGATTCGAGACA
AGAGGGACTGTGGAAGCGAGAGACCGGACCAACGATCGATCGTCCACGGA
TCGAGACTCCCTTGGACCTTCCCCAGCCCGGGAAGTTGCTCCAGCTCCCC
CTGATGGGAAAGCCCGACCCCACGGTGGAACAACTCCCTCCCCGTGGAGG
CTGCGCAAAGGCGAACCCCTTCGCGGTGCCGGACAATGACTACAAGGACT
CCTGGCTGGACTCTCTGTGGATAAACCTCTTCAGCAGCCGGATGTCCGCT
GCCGTCGAGGCCGAAGCTCGGAGGGTAGTGGCGGGTAGACGCCCCGGCAT
CAACTCCCCTCCCCCTTTGGAAAATCCCGGTGTTGTTGAGCCGCCGATGG
GCTTGGCCGCGGCAGGGCTTGAAGGAGAAAACGTGGGGGATCTCTCGAAG
GCGCGCGAGGCGCCACGATTAGTAGGAATATCAGCTGCGTCTGGGTTTCC
AAAGAGCCTGGAAGGTCTCAAGGGGGGGGTCTCCGAGGGAGGCGGGATAG
GAGGCTCGATCGCGCAGGAGGGTGACACGGGTCAGTACACCTACGAGAAT
TACGTGGACCTGGCGACGATGCTGCAGAAAGGACCACCCGAGCGGCAGAG
GGAGGTGGTGAAAGGCGTGCTGCGGTCCATTTTCCCGCCCTGGTTTCCTG
CGTTCTACCGAACCCTGTTCCCGTTCAGCAAGCCCGGGAAGTTGCTCCAG
CTCCCCCTGATGGGAAAGCCCGACCCCACGGTGGAACAACTCCCTCCCCG
TGGAGGCTGCGCAAAGGCGAACCCCTTCGCGGTGCCGGACAATGACTACA
AGGACTCCTGGCTGGACTCTCTGTGGATAAACCTCTTCAGCAGCCGGATG
TCCGCTGCCGTCGAGGCCGAAGCTCGGAGGGTAGTGGCGGGTAGACGCCC
CGGCATCAACTCCCCTCCCCCTTTGGAAAATCCCGGTGTTGTTGAGCCGC
CGATGGGCTTGGCCGCGGCAGGGCTTGAAGGAGAAAACGTGGGGGATCTC
TCGAAGGCGCGCGAGGCGCCACGATTAGTAGGAATATCAGCTGCGTCTGG
GTTTCCAAAGAGCCTGGAAGGTCTCAAGGGGGGGGTCTCCGAGGGAGGCG
GGATAGGAGGCTCGATCGCGCAGGAGGGTGACACGGGTCAGTACACCTAC
GAGAATTACGTGGACCTGGCGACGATGCTGCAGAAAGGACCACCCGAGCG
GCAGAGGGAGGTGGTGAAAGGCGTGCTGCGGTCCATTTTCCCGCCCTGGT
TTCCTGCGTTCTACCGAACCCTGTTCCCGTTCAGCAAGTTTTCCGCTCAG
GTGAACGCGCTCATGTGTCCGCCGCTCTTCACGTGGCTGGTGGGGAAGTC
GGAGCTAACGGACGGCGTCGTCGATCTTAAGTTTTCCGCTCAGGTGAACG
CGCTCATGTGTCCGCCGCTCTTCACGTGGCTGGTGGGGAAGTCGGAGCTA
ACGGACGGCGTCGTCGATCTTAAGGGTGTCGGCGGGGCGGGTCCGAGCCA
GCAGGCCTGGAGAAGCACCGTCAAGATCGAGCGATGCCGCTATTTGGAGG
CGAGCAAGTGCAAGGGCACGTGCATGAACCTCTGCAAGCTCCCGACGGAA
GCGTTCTTCCGGGAGGACTTAGGGTGTCGGCGGGGCGGGTCCGAGCCAGC
AGGCCTGGAGAAGCACCGTCAAGATCGAGCGATGCCGCTATTTGGAGGCG
AGCAAGTGCAAGGGCACGTGCATGAACCTCTGCAAGCTCCCGACGGAAGC
GTTCTTCCGGGAGGACTTAGGTATGCCGCTGCGGATGACCCCCAACTTCG
AAGACCTGTCCTGCGAGTTCGTCTTCGGGCAAGCGGCAGTTCCGGTTGAA
GATGATCCGCTCATGCGGGAGGTATGCCGCTGCGGATGACCCCCAACTTC
GAAGACCTGTCCTGCGAGTTCGTCTTCGGGCAAGCGGCAGTTCCGGTTGA
AGATGATCCGCTCATGCGGGAGCCCTGTTGGACGCAATGTCTCAGCTCCA
ACAAGCAGCCGAAAGTCTCGCAGAGGCCGTGTCACACCATGCCGGAATCG
CCTCTCAGGGACGAGCAGCAGCAGCAACAGCAGCTCTCGGGCTCACCGTA
GCCCTGTTGGACGCAATGTCTCAGCTCCAACAAGCAGCCGAAAGTCTCGC
AGAGGCCGTGTCACACCATGCCGGAATCGCCTCTCAGGGACGAGCAGCAG
CAGCAACAGCAGCTCTCGGGCTCACCGTAG
back to top