mRNA_F-serratus_M_contig1261.1975.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: D8LEE1_ECTSI (NADH:ubiquinone oxidoreductase complex I n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE1_ECTSI) HSP 1 Score: 826 bits (2134), Expect = 6.930e-294 Identity = 432/611 (70.70%), Postives = 497/611 (81.34%), Query Frame = 3
Query: 84 MTVKSCVVTCSVFCVLSFSPAAALRPNG-GGLPSGPRGATTRGGNNAHLSTSLSAAAGFDIGEWLRQMFNIPSPKASPQDQGVP---KPSESSGRGCTDAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKEAAEGSSFDASAPGLYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGEEGSSSEVIDFKGVESAIEAAEAFLPSDSPSSLA--ENELVLISPGEE-SGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKEISLYRKPRPSFVLVSSASAERYHRLSEEERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKAPDFTSLYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKAQQQATK 1895
M VK C+ + + S + AL +G GGLP G RG TRGG + S GFD+G+W +Q F + A + G K SGRGCTDAVLVLGGTGKTGQ+VVEALL Q R VVVA+R+KE+A +DAS PGL++Q GVDVRDEATLK+++LFDGV+QVVSALGPRFGEEGSSSE +DF+GV+SAIEAAEAFL SS A + E VL++PG+ S E GPGGAWQPLDDVIMGGRSSS+W+ GVGGGVLERQSG+TFGRW+G LVTEGGGFCGTV+K++PFDA G+DG+R+R+RGDG+RYKFRLKPDT+LD T ERQYQA FDTV GEWIEVD+PFESFVAV+RN VDF APRV+EGP+GGKMLSLG+V SRF FNEYPN K+ AG FQLDL EISLY+KPRP+FVLVSSASAERYHRL+EEERK+DIPIVALNPGGILNWKYKAE LR+SSLRHCVVRATGLI EGK GD+ VRLQ+GQGDT+SGR+SR EVG V AAL S Y+AGKTFE+RRDEAEDA GK PDFTSL+RGLV DEDRSLAS +GG LPLPPFA+VQDPPPPV+EERK EILNDPRVKA+ A+K
Sbjct: 1 MIVKPCIAVSAAVGLTSSALVGALHASGPGGLPRGARGTATRGGQGMEATGS-----GFDLGDWFKQAFTPQTAAAVKKKAGTSTAKKAKAPSGRGCTDAVLVLGGTGKTGQKVVEALLKQKRDVVVASRSKESA-AELYDASTPGLFVQSGVDVRDEATLKNKALFDGVTQVVSALGPRFGEEGSSSEAVDFQGVQSAIEAAEAFLEQGDGSSAAPGDQERVLVAPGDSGSDERGPGGAWQPLDDVIMGGRSSSAWQKGVGGGVLERQSGKTFGRWAGTLVTEGGGFCGTVIKDMPFDATGYDGIRIRVRGDGSRYKFRLKPDTKLDNTAERQYQAPFDTVKGEWIEVDLPFESFVAVKRNYVDFNAPRVNEGPAGGKMLSLGLVLSRFGFNEYPNPKYTAGAFQLDLMEISLYKKPRPNFVLVSSASAERYHRLTEEERKNDIPIVALNPGGILNWKYKAETSLRKSSLRHCVVRATGLIAEGKEGDESVRLQMGQGDTLSGRVSREEVGSTVAAALSSSYSAGKTFELRRDEAEDATGKTPDFTSLFRGLVLDEDRSLAS-----AGGASLPLPPFAIVQDPPPPVTEERKQEILNDPRVKARTAASK 600
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A836CBF4_9STRA (NADH:ubiquinone oxidoreductase complex I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF4_9STRA) HSP 1 Score: 465 bits (1197), Expect = 4.980e-153 Identity = 276/575 (48.00%), Postives = 356/575 (61.91%), Query Frame = 3
Query: 204 RGGNNAHLSTSLSAAAGFDIG---EWLRQMFNIPSPKASPQDQGVPKPSESSGRGCTDAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKEAAEGSSFDAS-APGLYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGEEGSSSEVIDFKGVESAIEAAE-AFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKEISLYRKPRPSFVLVSSASAERYHRLSEEERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIG--KAPDFTSLYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKAQQQATKEGRE 1907
RGG+ +++ A A G +WL +F+ KAS VPK DAVLV+G +G+ G+ VV+ LLA GR VV A RT+ + DA+ A GL+++ G+DV E E+ F+GV+QVVS LGP F + ++E +D++G + + A E A L S + ++ A L + G E W PLDDVIMGG+SSS+W A G R F RWSG LVT+GGGFCGTVVK++ FD AG+DG+RL +RGDG+R+KFRLKP ++ E QYQA+FDTV G W+ ++PF +F AVRRN V + AP V +GPSG KM S+GIV SRF +NEY N K K G F LD++ I LYR RP+ VLVSSA AER +RL+ EER DIPIV LNP GILNWK+KAE LR S + + +VRA GL+P KG D P LQ+GQ D SGRI+R E+ +AV A L SP+A GKTFE+RRDE+EDA G P + LVPD DR++ + LPPF +DPPPP IL+DPRV+AQQ +G E
Sbjct: 24 RGGSGLRSNSARMAVAAPQTGNAFKWLTDIFSFS--KAS-----VPK----------DAVLVIGASGRAGREVVKELLASGRSVVAAGRTQSKITEALGDAAGARGLWVKEGLDVTAEEI--PETFFEGVTQVVSCLGPSFSDPALNAEAVDYRGNAAVLRACERAGLASTAAAAAASAPLCDFASGASLPE------WAPLDDVIMGGKSSSAWDAAAGD--------RDFARWSGELVTDGGGFCGTVVKKLNFDTAGYDGIRLVVRGDGSRFKFRLKP-ADMAQANEYQYQASFDTVDGAWVTAELPFSAFTAVRRNDVIYAAPPVDKGPSGTKMSSIGIVLSRFEYNEYANYKCKPGPFSLDVRAIELYRHARPAVVLVSSAGAERVNRLTAEERAKDIPIVQLNPQGILNWKFKAETALRTSGVPYAIVRAAGLLPGAKG-DGPRLLQLGQADRFSGRITRAELAKAVAATLNSPHATGKTFEVRRDESEDAAGVDPLPTLPAQLAALVPDRDRAVRA------------LPPFPAARDPPPPPDAAGVQAILSDPRVRAQQARDGKGAE 551
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: K8YU42_NANGC (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YU42_NANGC) HSP 1 Score: 360 bits (925), Expect = 9.230e-111 Identity = 263/662 (39.73%), Postives = 349/662 (52.72%), Query Frame = 3
Query: 126 VLSFSPAAALRPNGGGLPSGPRGATTRGGNNAHLSTSLSA------------AAGFDIGEWLRQMFNIPSPKASPQDQGVPKPSESSGRGCTDAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTK----EAAEGSSFDASAP-----GLYMQI-GVDVRDEATL---KDESLFDGVSQVVSALGPRFGEE---------GSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGA-------------------WQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVK--EIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVP--------GEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKEISLYRKPRPSFVLVSSASAERYHRL-SEEERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPV--RLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDA-----IGKAPDFTS-----LYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKAQQ 1883
V++F PA+ L PS G+N S L+ A G + + ++ ++ + +P P S R +V G TG+ G+ +V+ALL +G VV A R + E S+ + P GL I G+DV + ATL K ++ VV ALGP G + G +SE +DFKGV I+A + + + V+ E G+ G WQ LDDVIMGG+SSSS + L+R+ G + ++G+LV EGGGFCGT + D +GFDGV LR+RGDG+RYK LK L + E YQAAFDT+P G W + IPF F V RN VD+ A + PS +SLG+V+SRF FN N + G F L L+EI+LYR RPS VLVSSA AER ++ +EE+RK++IPIV LNPGGILNWKY+AE LR S L + ++R GL+PE GD+P +LQ GQGDTI+GR++R ++G AV AAL SPY+AGKT EIRRDEA DA +G+ P T+ L++ LV D+DR+++ S L PF DPP VS ER EILNDPRVKAQQ
Sbjct: 24 VVAFLPASVLPTRESSFPSRLHAENKHNGDNKPGSNGLNTLFSPPSMTNPFEALGKQLTFFFEKLTGGTDTNSAMASRALPPPPPSVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASPGHGLLDYISGIDVTNAATLSSGKVPAVLKEACHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDA------------VVDAKGVVKEGAGEGGKKKAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLE-------LDREKG--YATYTGSLVVEGGGFCGTRASGGDASVDLSGFDGVTLRVRGDGHRYKLNLKTTETLAS--ENVYQAAFDTLPLQDVGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQ--PSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRAETYLRASPLPYTILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQPLVADKDRAVSGTSG---------LLPFPEAVDPPQEVSPERAKEILNDPRVKAQQ 651
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A4D9DB39_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB39_9STRA) HSP 1 Score: 340 bits (873), Expect = 9.990e-104 Identity = 250/630 (39.68%), Postives = 327/630 (51.90%), Query Frame = 3
Query: 321 QGVPKPSESSGRGCTDAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTK----EAAEGSSFDASAP-----GLYMQI-GVDVRDEATLKD---ESLFDGVSQVVSALGPRFGEE---------GSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGA-------------------WQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVK--EIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVP--------GEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKEISLYRKPRPSFVLVSSASAERYHRL-SEEERKSDIPIVALNPGGILNWKYK--------------------------------------------AEARLRRSSLRHCVVRATGLIPEGKGGDDPV--RLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDA-----IGKAPDFTS-----LYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKAQQQ 1886
+ +P P + R +V G TG+ G+ +V+ALL +G VV A R + E S+ + P GL I G+DV + ATL ++ S VV ALGP G + G +SE +DFKGV I+A + + + V+ E G+ G WQ LDDVIMGG+SSSS + L+R+ G + ++G+LV EGGGFCGT + P D +GFDGV LR+RGDG+RYK LK L + E YQAAFDT+P G W + IPF F V RN VD+ A + PS +SLG+V+SRF FN N + G F L L+EI+LYR RPS VLVSSA AER ++ +EE+RK++IPIV LNPGGILNWKY+ AE LR S L + ++R GL+PE GD+P +LQ GQGDTI+GR++R ++G AV AAL SPY+AGKT EIRRDEA DA +G+ P T+ L++ LV D+DR+++ S L PF DPP VS ER EILNDPRVKAQQ+
Sbjct: 4 RALPPPPPTVRRTGGPVSVVFGATGRAGREIVQALLREGHDVVAAVRNESKLNEVFGASALSGATPASLGHGLLDYISGIDVTNAATLSSGNVPAVLKEASHVVVALGPVGGVQPGGGFGFFPGLTSEDVDFKGVTKVIDA------------VVDAKGVVKEGAGEGGKKQAAGEVEERKRTLFRFETPEDVAKWQRLDDVIMGGQSSSSLE-------LDREKG--YATYTGSLVVEGGGFCGTRASGGDAPVDLSGFDGVTLRVRGDGHRYKLNLKTTETLAS--ENVYQAAFDTLPLQDAGEGAGGWQTITIPFHRFYPVVRNRVDYKAAPLQ--PSSQAAVSLGLVYSRFEFNRQANPYYDPGAFSLSLEEIALYRSRRPSLVLVSSAGAERNAKVETEEDRKTEIPIVMLNPGGILNWKYRSVQRDRERKREDGRPDVVCAVESPACAFASVFFNTPLLFSSFPSAETYLRASPLPYIILRPCGLVPEKAFGDEPSTGKLQAGQGDTITGRLTRQDLGLAVAAALASPYSAGKTMEIRRDEAADANAMTGVGRRPRTTAVTALELFQTLVADKDRAVSGTSG---------LFPFPEAVDPPQEVSPERAKEILNDPRVKAQQE 599
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A0D2N0U4_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N0U4_9CHLO) HSP 1 Score: 333 bits (853), Expect = 1.690e-101 Identity = 232/549 (42.26%), Postives = 306/549 (55.74%), Query Frame = 3
Query: 366 DAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKEAA----------EGSSFDASAPG-LYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGE---------EGSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVP-GEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLS-LGIVFSRFSFNEYPNAKFKAGMFQLDLKE-ISLYRKPRPSFVLVSSASAERYHRLSE--EERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKAP---DFTSLYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKA---QQQATKEGREVQGQ 1919
+AVLVLG TG+ G+ +V+ LL GR VV A RT + A EG + G L++Q GVDV DE+TL + LF GV+QVVSALG G +G + E ++ KG+ + + A + L +P E++ + E+ AW+ LDDVIMGG SSS A LE SG W G+LV EGGGFCG +++ D + FDG+R+R++GDG +KF +K + D TPE YQA FDT G+W V +P+ SFV V+R D P+ P G+ +S LG+V SRF FN+ PN ++ G F+L + +S YR PRP +++SSA ER + + E RK DIPIV LNPGG+LNWK++AE R S + VVR TGL +P L+ QGD+ISG++SR EV V AAL SP AA KTFE+RR+EA DA GK T L+ L D R VGL PF PP P +EERKAEIL DPRV+ +QQ + G +GQ
Sbjct: 27 NAVLVLGATGRAGRLIVQELLRSGRTVVAAVRTADKASEVFSALELQEGRQAEGKGDGILFVQAGVDVTDESTLTPD-LFAGVTQVVSALGGVTGRLPDGTFGYLDGMTPEAVEAKGMANVVAAMKQHL---APQIRTTQEVLPMRTAEDLE------AWERLDDVIMGGSSSSGLTA------LEDGSGAA---WKGDLVVEGGGFCGARTRKLGLDLSQFDGLRMRVKGDGQTFKFNIKTADQED-TPESTYQATFDTSEEGDWTTVHLPWHSFVPVKRAQSD---PQGE--PLRGEAISKLGLVLSRFEFNKMPNPRYHPGPFELTIGGGLSAYRDPRPQLLVISSAGVERNAIIGDDAEARKKDIPIVQLNPGGVLNWKFEAECVARASGFPYSVVRCTGLDDGSAAAAEPRLLEADQGDSISGKVSRAEVALVVAAALASPDAANKTFELRRNEAVDAKGKTTGPRQLTRLFLKLALDSHR----------WRVGLQ--PFPRAVPPPAPPTEERKAEILADPRVQEVRDRQQRARVGLAPEGQ 538
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A2V0P7E0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7E0_9CHLO) HSP 1 Score: 334 bits (857), Expect = 4.200e-101 Identity = 225/530 (42.45%), Postives = 291/530 (54.91%), Query Frame = 3
Query: 366 DAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKE----------AAEGSSFDASAPGLYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGE---------EGSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVP-GEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKE-ISLYRKPRPSFVLVSSASAERYHRLSE--EERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKAP---DFTSLYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKA 1877
DAVLVLG TG+ G+ +V+ LL GR VV A R+ + AEG + S L++ GVDV E TL +E LF GV+QVVSALG G +G + E ++ KG+ + + A F+ +P+ A +E+VL E E AW+ LDDVIMGG SSS GG E W G+L+ EGGGFCG +++ D +GFDG++LR++ DG +K +K + D TPE YQA FDT G+W V +P+ +FV V+R D P+ E +G + LG+V SRF FN+ PN + G F L + + YR PRP VL+SSA ER + + E RK IPIV LNPGG+LNWKY+AE R S +CVVRATGL + L+ QGDT+SGR+SR E + AAL +P AAGKTFE+RR EA D G L+ L PD +R VGLP PF PP P +EERKAEIL DPRV A
Sbjct: 117 DAVLVLGATGRAGRAIVQQLLRDGRTVVAAVRSADKATEVFSSLGVAEGRQ-EGSGGILFVDAGVDVTKEETLTEE-LFRGVTQVVSALGGVAGRLPDGGFGYLDGMTPEAVEAKGIANVVAAMARFM---APAKRA-SEVVLSMRTAEDLE-----AWERLDDVIMGGSSSSGLGPAADGGGAE---------WKGDLIVEGGGFCGARTRKLGLDLSGFDGLQLRVKSDGQTFKLNVKTADQED-TPESTYQATFDTAEDGDWSTVRLPWHTFVPVKRAQSD---PQ-GEPLTGDSISKLGLVLSRFEFNKMPNPAYHPGPFTLSIAGGVGAYRAPRPQLVLLSSAGVERNAVIGDDTEARKRSIPIVQLNPGGVLNWKYEAECAARASGFPYCVVRATGLDDGSPAASESRLLEADQGDTMSGRVSRAETALVISAALTNPEAAGKTFELRRSEAADGAGAGNGPRQLNRLFLKLAPDANR----------WRVGLP--PFPRAVPPPAPPTEERKAEILADPRVAA 609
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: E1Z5W0_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5W0_CHLVA) HSP 1 Score: 326 bits (835), Expect = 1.480e-97 Identity = 224/528 (42.42%), Postives = 293/528 (55.49%), Query Frame = 3
Query: 366 DAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKEAA-----EGSSFDASAPG----LYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGE--EGS-------SSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNR-YKFRLKPDTELDATPERQYQAAFDTVPG-EWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKE-ISLYRKPRPSFVLVSSASAERYHRLS--EEERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKA---PDFTSLYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRV 1871
DAVLV G TG+ G+ VV+ LLAQGR VV A R+ A + + PG L+++ GVD+ + TL +F+GVSQVV+A+G FG EG +SE +D GV + AA A L P+ +V + E+ + WQ LDDVIMGG+SSS A G SG W+G L+ +GGGFCG K P D + +DG+ LR++ DG + +K +K + + + PE YQA FDT PG +W V IP+ FV V+R GAP + ++ G+V+SRF FN +PN +++AG F+L ++ I YR RP ++VSSA ER ++ EE RK DIPIV LNPGG+LN KY EA +R S L + V+R TGL E + GD L+ GQGD ISGRISR E+ VVAALG+P AAGKT E+RR E+ DA GK D L+ G D R L PF PP PVSEERK EIL+D RV
Sbjct: 102 DAVLVFGATGRMGRTVVQELLAQGRTVVAAVRSPGRARDVFGKAGLVEGRQPGGAGILFVESGVDITNPDTLSP-LMFEGVSQVVTAVGAVFGRTAEGQMGYLDDMTSERVDAAGVANVAAAAAACLD---PAERRSEGVVRMRSAEDLQK------WQRLDDVIMGGKSSSGLAAAEDG------SGAV---WTGELIVDGGGFCGARTKPEPLDLSAYDGIALRVKSDGGQTFKLNIKTEAQSEV-PEDTYQATFDTNPGGDWTSVFIPWHEFVLVKRARTVPGAPPIDPA----RIRQFGLVYSRFDFNGFPNPRYRAGKFELAIEGGIRAYRDARPQLLMVSSAGVERNAKVGNDEEARKKDIPIVQLNPGGVLNHKYTGEAAVRASGLAYSVLRPTGLTNESEPGD--FLLEAGQGDRISGRISREELSTVVVAALGTPAAAGKTLELRRQESADAAGKKMSQQDKLRLFLGAAEDRLRQRVG------------LEPFPAPVAPPAPVSEERKKEILSDVRV 591
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A7S0RVS8_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RVS8_9CHLO) HSP 1 Score: 315 bits (807), Expect = 6.330e-94 Identity = 225/558 (40.32%), Postives = 299/558 (53.58%), Query Frame = 3
Query: 312 PQDQGVPKPSESSGRGCTDAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKEAAEGSSFDAS--------APGLYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGE---------EGSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIP--FDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNSVD-FGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKE-ISLYRKPRPSFVLVSSASAERYHRLSE--EERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKAPD---FTSLYRGLVPDEDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILND-PRVKAQQQATKEGR 1904
P G PKP+ +AVLVLG +G+ G+RVVE L+ GR VV A R+ + A+ + +A G+ DV +LK L+ GV+QVV +G + G +G + EV++ G+ + + LP + SL LV + G T W+ +DDVIMGG SSS + L + G RW G L+ EGGGFCG K + D +G+DGV LR++GDG +K +K +LD+ PE YQA FDTVPG+W +V IP+ +FV V+R D GAP PS K G+V SRF FN+ PN +K G F+L + I Y+ PR V VSSA ER + + E RK+DIPIV LNPG LN KY AE +R S + VVR+TG+I +GG P L+ QGD ISG ISR E +VAAL SP A GKTFE+RR EA DA GK+ + +T ++ L D +R VGLP PF PP PV+EER EILN+ RV+ Q+A + +
Sbjct: 113 PARAGTPKPAPLKRE---NAVLVLGASGRVGRRVVERLIKMGRTVVAATRSTDTAKAALGEAGLVEGAQPGGKGILFYEAADVTSVDSLKRAGLWKGVTQVVLCVGGKAGPLPGGGFGYIDGLTPEVVEAGGIANLVSVLPEVLPKQA--SLQYTTLVPM------GTTDEVAVWERMDDVIMGGNSSSVIE-------LAPELGAGITRWRGELIVEGGGFCGARTKAMADGADLSGYDGVALRVKGDGQIFKINIKTTDQLDS-PESVYQATFDTVPGQWTDVTIPWHNFVPVKRAQSDPAGAPL---DPS--KKAKFGLVLSRFEFNKMPNPAYKPGPFELLIDGGIRAYKAPRAQLVQVSSAGVERNAIIGDDVERRKADIPIVQLNPGATLNHKYAAELAVRASGYPYTVVRSTGMIDSNEGG--PFLLEADQGDIISGSISRDEAADVLVAALTSPEAVGKTFEVRRGEALDARGKSMNPAAYTRMFLRLALDRNR----------WRVGLP--PFPKYAPPPAPVTEERTQEILNEVTRVREVQKAAMDAK 632
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A7S1SQV2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQV2_9CHLO) HSP 1 Score: 310 bits (793), Expect = 8.280e-92 Identity = 216/529 (40.83%), Postives = 289/529 (54.63%), Query Frame = 3
Query: 345 SSGRGCTDAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKE--------AAEGSSFDASAPG---LYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGEE---------GSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKAGVGGGVLERQSGRTFGRWSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKE-ISLYRKPRPSFVLVSSASAERYHRLSEEE--RKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIP-----------EGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKAPDFTSLYRGLVPDEDRSLASFSSCSSGGVGLP-LPPFAMVQDPPPP 1826
++G+ DAVLV+G GK G V ALLA GR VV A R + A G A++ G L++ GVD+ TL E LF GV+QVV+A+GPRFG++ GSS +D +GV + + AA+A LPS A L L + EE + W+PL+DVIMGG+SSS + G + G WSG ++ EGGGFCG + FDG+RLR++G G R+K LK + ++D PE YQA F+TV GEW+EV +P+ F V+R S D P + P+ + +G+V+SRF FN PN F G F+L L +S Y+ PRP FVLVSSA ER R+ +++ R DIPI+ LNPGGILN KY E LR S L + ++R TGL+ EG G L++GQGD +SG+ISRGEV R V AL P A GKT E RR EA D++G+ + L + LV L++ + G+P P PPPP
Sbjct: 133 AAGKEKRDAVLVVGSAGKLGAEVTAALLAAGRCVVAAGRQSDESALEAALAEAGLKAGAASVGDGYLHLAPGVDISRPETLSRE-LFRGVAQVVAAVGPRFGKQADGSMGFGAGSSPAEVDAEGVAALVAAAQAHLPSVGTRRSAAEVLSLAT--EEDVQR-----WRPLNDVIMGGQSSSGMELLTNG-----EDGSAV--WSGTVIVEGGGFCGLRTEPADLKLDDFDGIRLRVKGGGQRFKLNLKTEEQMDV-PESTYQACFNTVEGEWVEVFLPWHEFRCVKRASFDPSGPPLD--PT--HVRQVGLVYSRFEFNGLPNPFFTPGEFRLLLDGGVSGYKDPRPEFVLVSSAGVERNARIGDDQEARARDIPILRLNPGGILNAKYDGECALRASRLAYTIIRPTGLVQPKEVEEEEEKEEGSGARGCRVLELGQGDVVSGKISRGEVARLVATALSLPEAVGKTVEARRCEAADSLGRVTNEKEL-KALV------LSTHADWDRAKYGIPPFPRPVEYVSPPPP 634
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Match: A0A5J4Y258_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y258_9CHLO) HSP 1 Score: 307 bits (787), Expect = 8.090e-91 Identity = 203/528 (38.45%), Postives = 282/528 (53.41%), Query Frame = 3
Query: 366 DAVLVLGGTGKTGQRVVEALLAQGRKVVVAARTKEAAEGSSFDASAPG---LYMQIGVDVRDEATLKDESLFDGVSQVVSALGPRFGEE---------GSSSEVIDFKGVESAIEAAEAFLPSDSPSSLAENELVLISPGEESGETGPGGAWQPLDDVIMGGRSSSSWKA-----GVGGGVLERQSGRTFGR-WSGNLVTEGGGFCGTVVKEIPFDAAGFDGVRLRLRGDGNRYKFRLKPDTELDATPERQYQAAFDTVPGEWIEVDIPFESFVAVRRNSVDFGAPRVHEGPSGGKMLSLGIVFSRFSFNEYPNAKFKAGMFQLDLKE-ISLYRKPRPSFVLVSSASAERYHRLSE--EERKSDIPIVALNPGGILNWKYKAEARLRRSSLRHCVVRATGLIPEGKGGDDPVRLQVGQGDTISGRISRGEVGRAVVAALGSPYAAGKTFEIRRDEAEDAIGKAPDFTSLYRGLVPD-EDRSLASFSSCSSGGVGLPLPPFAMVQDPPPPVSEERKAEILNDPRVKAQQ 1883
DAVLV G +G+ G++VV L+ GR VV + + E + +A G LY + VD+ D A L + L+ G+SQVV+ +GP FG + +SE +D +G+ + +AAE FLP+ E L + S + W+ LDD IMGG+S S + G G ++Q G W G +T+GGGFCG K + + FDG+ LR++GDG YKF LK +++ PE YQA +DT+ GEW+ V +P+ FV V R D A + ++ +G+V SRF +N PN +FK G F+L + + I+ ++ RP ++VSSA+ ER + + E RK DIPIV LNPGG LN KY E +R S L + V+R+TG+ + +GG P L+ QGDTISG ISR E+ R VV AL +P A GKT E+RR EA DA GK+ L R +DRS A L P +EER EIL D RV+A Q
Sbjct: 124 DAVLVFGASGRLGKQVVAELVGAGRHVVATSHKADKLEQAFAGETAEGPGHLYFENCVDITDSAALMSKELWQGISQVVTTVGPAFGRQPDGGMGYIDNMTSERVDAEGISNIAKAAEHFLPAQRFQPEVEQVLSMRSAADLE-------VWEKLDDTIMGGKSGSYLQTAEDLHGFQGDYKDKQPYDFEGSVWRGETITDGGGFCGARTKMLDLNLQRFDGISLRVKGDGQTYKFNLKTADQMNV-PESTYQAQYDTIDGEWVTVYMPWHEFVPVTRAQYDSKAKPLDPA----QVKQIGLVLSRFHYNSLPNQRFKPGNFELQIADGIAGFKHERPCILMVSSAAVERNAIIGDDLEARKKDIPIVQLNPGGTLNHKYTGETAVRGSGLPYSVLRSTGITDKTEGG--PFLLEAYQGDTISGNISRHELARLVVTALSTPEATGKTIEVRRSEAADAKGKSDSAAQLQRLFYSSTQDRSRAQIG----------LAPMXXXXXXXXXXTEERTKEILADDRVQAVQ 627 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1261.1975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1261.1975.1 >prot_F-serratus_M_contig1261.1975.1 ID=prot_F-serratus_M_contig1261.1975.1|Name=mRNA_F-serratus_M_contig1261.1975.1|organism=Fucus serratus male|type=polypeptide|length=629bp MTVKSCVVTCSVFCVLSFSPAAALRPNGGGLPSGPRGATTRGGNNAHLSTback to top mRNA from alignment at F-serratus_M_contig1261:76937..97840+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1261.1975.1 ID=mRNA_F-serratus_M_contig1261.1975.1|Name=mRNA_F-serratus_M_contig1261.1975.1|organism=Fucus serratus male|type=mRNA|length=20904bp|location=Sequence derived from alignment at F-serratus_M_contig1261:76937..97840+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1261:76937..97840+ >mRNA_F-serratus_M_contig1261.1975.1 ID=mRNA_F-serratus_M_contig1261.1975.1|Name=mRNA_F-serratus_M_contig1261.1975.1|organism=Fucus serratus male|type=CDS|length=3774bp|location=Sequence derived from alignment at F-serratus_M_contig1261:76937..97840+ (Fucus serratus male)back to top |