mRNA_F-serratus_M_contig1261.1971.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: D8LMK6_ECTSI (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK6_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.260e-23 Identity = 47/139 (33.81%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 22 WLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRNN--RWSHEALKKWTTKMDLAGARKVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEGNMSSFEPNDWEIV 432
WL D+V+N++++L RD ELC RR S F +FF KL+ ++++ +K+WT ++ + K+++P+N HW + V +++KR+ +YDS +++E +L +LED+D+ K G+ ++FEP+DW V
Sbjct: 388 WLNDEVVNMYMQLLSCRDKELCKANPSRRQSHFFTSFFLTKLKGMDCKYNYTGVKRWTRRVKVFEMDKIFVPVNVS----NAHWCMAVIFVQQKRINYYDSMGGGGKSVREDLLLWLEDEDEDKNGDNATFEPDDWTTV 522
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A0B6Z4U0_9EUPU (ULP_PROTEASE domain-containing protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Z4U0_9EUPU) HSP 1 Score: 85.1 bits (209), Expect = 1.930e-16 Identity = 48/138 (34.78%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 22 WLGDDVINLWIELCRSRDGELCGKGTGRRHSCF-LNTFFFVKLRNNRWSHEALKKWTTKMDLAGARKVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEGNMSSFEPNDWEIV 432
WL D+VIN ++ L R GEL G R + NTFF+ K++ H A+K+WT +++ + IP++ G+HW LCVADM+KK V +YDS + +L Y+ D+ K + ++F N+W+ V
Sbjct: 509 WLNDEVINFYMNLLM-RSGEL-----GERAKLYAFNTFFYPKVKTG--GHSAVKRWTKNINIFAVHYIIIPVH-----LGVHWCLCVADMQKKLVTYYDSMGAKNNQCLYSVLQYIHDESIAK--SYTAFNRNEWKQV 631
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A433SYG7_ELYCH (ULP_PROTEASE domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SYG7_ELYCH) HSP 1 Score: 83.2 bits (204), Expect = 8.920e-16 Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 22 WLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRNNRWSHEALKKWTTKMDLAGARKVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEGNMSSFEPNDWEIV 432
WL D+VIN ++ + R G+ G+ NTFF+ K+ + H A+K+WT K+D+ + IP++ G+HW LCV DM+K+ + +YDS + +L+Y+ D+ K+ + + +DW +V
Sbjct: 449 WLNDEVINFYMNMLTER-----GEKEGQAKVYAFNTFFYPKIMSG--GHAAVKRWTKKVDIFSVHFILIPVH-----LGMHWCLCVVDMQKQVITYYDSMGAENNQCLQAVLNYINDESVAKK--QTPIKKSDWTLV 571
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: V7AZC1_PHAVU (ULP_PROTEASE domain-containing protein n=2 Tax=Phaseoleae TaxID=163735 RepID=V7AZC1_PHAVU) HSP 1 Score: 73.6 bits (179), Expect = 1.890e-12 Identity = 42/132 (31.82%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 16 TGWLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRN--NRWSHEALKKWTTKMDLAGAR----KVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEG 393
TGWL D+VINL++ L + R+ K + H F NTFF+ KL + N + +++++WT++ L + K+++PI+ E+ HW L V + E K++ + DS K +++ E++ Y D+ + K G
Sbjct: 277 TGWLNDEVINLYLTLLKEREQRQSHKFL-KCH--FFNTFFYKKLISGPNGYDFKSVRRWTSQRKLGYSLLECDKIFVPIHQEI-----HWCLAVINNEDKKLQYLDSMKGEDSSVLEKLAKYFADEVNDKNG 400
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A0L9TC05_PHAAN (ULP_PROTEASE domain-containing protein n=6 Tax=Vigna TaxID=3913 RepID=A0A0L9TC05_PHAAN) HSP 1 Score: 70.1 bits (170), Expect = 3.080e-11 Identity = 40/132 (30.30%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 16 TGWLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRN--NRWSHEALKKWTTKMDLAGAR----KVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEG 393
TGWL D+VINL++ L + R+ K + H F NTFF+ KL + N + +++++WT++ L + K+++PI+ E+ HW L V + + +++ + DS K ++ E++ Y D+ + K G
Sbjct: 276 TGWLNDEVINLYLALLKEREQRQSHKFL-KCH--FFNTFFYKKLISGPNGYDFKSVRRWTSQRKLGYSLLECDKIFVPIHQEI-----HWCLAVINNKDRKLQYLDSMKGEDRSVLEKLAKYFADEVNDKNG 399
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A2Z6LG92_TRISU (ULP_PROTEASE domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LG92_TRISU) HSP 1 Score: 69.3 bits (168), Expect = 5.810e-11 Identity = 42/148 (28.38%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 16 TGWLGDDVINLWIELCRSRDGELCGKGTGRRHSC-FLNTFFFVKLRN--NRWSHEALKKWTTKMDLA----GARKVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEGNMSSFEPNDWEIVQD 438
+GWL D+VINL++EL + R+ + + +C F NTFF+ KL + N + ++++++WTT+ L K+++PI+ ++ HW L V + ++K++ + DS K + + + Y D+ K G + E V+D
Sbjct: 281 SGWLNDEVINLYLELLKERER----RDPQKYLNCHFFNTFFYKKLISGKNGYDYKSVRRWTTQKKLGYGLHECDKIFVPIHQQI-----HWCLAVINKKEKKLQYLDSLKGIDIQVLDMLARYFVDEVKDKTGEDIDISCWEKEFVED 419
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A2K3P705_TRIPR (Ubiquitin-like-specific protease ESD4-like protein n=3 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3P705_TRIPR) HSP 1 Score: 69.3 bits (168), Expect = 5.820e-11 Identity = 43/148 (29.05%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 16 TGWLGDDVINLWIELCRSRDGELCGKGTGRRHSC-FLNTFFFVKLRN--NRWSHEALKKWTTKMDLA----GARKVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEGNMSSFEPNDWEIVQD 438
+GWL D+VINL++EL + R+ + + +C F NTFF+ KL + N + ++++++WTT+ L K+++PI+ ++ HW L V + ++K++ + DS K T + + Y D+ K G + E V+D
Sbjct: 302 SGWLNDEVINLYLELLKERER----RDPQKYLNCHFFNTFFYKKLISGKNGYDYKSVRRWTTQKKLGYGLHECDKIFVPIHQQI-----HWCLAVINKKEKKLQYLDSLKGIDTQVLGVLARYFVDEVKDKTGEDIDISCWEKEFVED 440
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A151T5Z4_CAJCA (Sentrin-specific protease 2 n=3 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5Z4_CAJCA) HSP 1 Score: 64.7 bits (156), Expect = 2.380e-9 Identity = 41/147 (27.89%), Postives = 75/147 (51.02%), Query Frame = 1
Query: 16 TGWLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRNN--RWSHEALKKWTTKMDLAGAR----KVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDDDDWKEGNMSSFEPNDWEIVQD 438
TGWL DDV+NL++ L + R+ K + H F NTFF+ KL + + ++++++WT++ L + K+++PI+ + HW L V + K + DS K ++ +++ Y D+ + K G + E V+D
Sbjct: 290 TGWLNDDVVNLYMALLKEREQREPQKFL-KCH--FFNTFFYKKLISGIEGYDYKSVRRWTSQRKLGYSLLECDKIFVPIHQNI-----HWCLAVINKRDKTFQYLDSMKGEDISVLDKLAQYFVDEVNDKTGKDIDVTTWEKECVKD 428
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: UPI0010FB8019 (ubiquitin-like-specific protease ESD4 isoform X3 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI0010FB8019) HSP 1 Score: 60.1 bits (144), Expect = 9.070e-8 Identity = 34/119 (28.57%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 16 TGWLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRNN--RWSHEALKKWTTKMDLAGAR----KVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERI 354
TGWL DDV+NL++ L + R+ K + H F NTFF+ KL + + ++++++WT++ L + K+++PI+ + HW L V + K + DS K ++ +++
Sbjct: 284 TGWLNDDVVNLYMALLKEREQREPQKFL-KCH--FFNTFFYKKLISGIEGYDYKSVRRWTSQRKLGYSLLECDKIFVPIHQNI-----HWCLAVINKRDKTFQYLDSMKGEDISVLDKL 394
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Match: A0A1J3I2J4_NOCCA (Ubiquitin-like-specific protease ESD4 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I2J4_NOCCA) HSP 1 Score: 50.1 bits (118), Expect = 2.600e-5 Identity = 27/91 (29.67%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 118 FLNTFFFVKLRNNR-WSHEALKKWTTKM----DLAGARKVYIPINHEVGGRGLHWSLCVADMEKKRVIHYDSFKNRTTTIQERILDYLEDD 375
F N FF++KL + +++EA+++WTT+ +L +++PI+ G+HW+L V ++ K++ DS K I + + YL D+
Sbjct: 5 FFNPFFYIKLASRSGYNYEAVRRWTTQRKLGYNLIDCDIIFVPIHG-----GVHWTLAVINIRKRKFQFLDSLKGFDPRILKALAKYLVDE 90 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1261.1971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1261.1971.1 >prot_F-serratus_M_contig1261.1971.1 ID=prot_F-serratus_M_contig1261.1971.1|Name=mRNA_F-serratus_M_contig1261.1971.1|organism=Fucus serratus male|type=polypeptide|length=147bp DPNHCTGWLGDDVINLWIELCRSRDGELCGKGTGRRHSCFLNTFFFVKLRback to top mRNA from alignment at F-serratus_M_contig1261:11395..12327- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1261.1971.1 ID=mRNA_F-serratus_M_contig1261.1971.1|Name=mRNA_F-serratus_M_contig1261.1971.1|organism=Fucus serratus male|type=mRNA|length=933bp|location=Sequence derived from alignment at F-serratus_M_contig1261:11395..12327- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1261:11395..12327- >mRNA_F-serratus_M_contig1261.1971.1 ID=mRNA_F-serratus_M_contig1261.1971.1|Name=mRNA_F-serratus_M_contig1261.1971.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig1261:11395..12327- (Fucus serratus male)back to top |