mRNA_F-serratus_M_contig1260.1968.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: D8LSF1_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF1_ECTSI) HSP 1 Score: 285 bits (728), Expect = 1.970e-92 Identity = 137/184 (74.46%), Postives = 150/184 (81.52%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDN-GSRALVHRGECLVQTGHNRCVVSVFDYVVAPGERVRWQEDEVEWGSYISWEEVNAKVSSGAWEFVPDGLQVWGHYLSWMAS 649
+VDWVDTRGRVIC+LPR VH+ NVLHRGAGVM+R+ KGEVYCHRRTSTKRVFPSMYDMFIGGVS TMEP LTTALREL EELGLGP S E G D + ++ +RGECLVQTGHNRC VSVFDY V GE V+WQEDEVEWGSY+ WEEV +KVS G WEFVPDGLQVW HYL W A+
Sbjct: 187 LVDWVDTRGRVICALPRPVVHSNNVLHRGAGVMIRDAKGEVYCHRRTSTKRVFPSMYDMFIGGVSGTMEPPLTTALRELGEELGLGPYGNSGSSPENQGDDGLKTTSMRYRGECLVQTGHNRCFVSVFDYRVVAGETVKWQEDEVEWGSYVPWEEVVSKVSEGEWEFVPDGLQVWQHYLDWEAA 370
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A4D9D9L5_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9L5_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.540e-39 Identity = 86/188 (45.74%), Postives = 113/188 (60.11%), Query Frame = 2
Query: 104 VDWVDTRGRVIC-----SLPRTTVHACNVLHRGAGVMVRNEKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVVAPG--ERVRWQEDEVEWGSYISWEEVNAKV----SSGAWEFVPDGLQVWGHYL 634
V WV+ G + LPR +H NVLH+GAG++VR+ + V+ H+R++ KR+FPS+YDMF+GGVS ME TTA REL EELG GP + +E D R L + LV+T +NRC V V++YVVA G E +EV+WG +I EEV +V SG W FVPDGL VW +L
Sbjct: 188 VSWVNNHGHDLLPKSSKGLPRPLMHRLNVLHKGAGILVRDAQSRVFVHQRSTHKRIFPSLYDMFVGGVSLFMEDTKTTARRELQEELGFGPAAC---AAQEESTD--FRFLF---DVLVETSYNRCFVDVYEYVVAGGQEESAVLDPEEVQWGDWIPMEEVTRRVLLNGRSGEWTFVPDGLLVWAAFL 367
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: B7FXH4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXH4_PHATC) HSP 1 Score: 132 bits (331), Expect = 1.700e-32 Identity = 81/238 (34.03%), Postives = 118/238 (49.58%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNE-------------------KGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVV-APGERVRWQEDEVEWGSYISWEEVNAKV--------SSGAW-----------------------------EFVPDGLQVWGHYLSWM 643
+V+ +D G+++ +PR VH N+LHRG GV + + + ++YCHRRTSTKR+FP +YDMF+GGV+ E + TALRE+ EELGL G+ G A++ C+V TG+NRCVV ++ YV+ ERV WQ +EV WG ++ + V A V S G+W ++VPDGL VW +L ++
Sbjct: 226 IVEMMDRDGKILGKVPRNLVHEYNLLHRGVGVFITRDVPLQLPIHGARNSSPSPTHQPDLYCHRRTSTKRIFPDLYDMFVGGVALAGEDSRRTALREVGEELGLAQ------------GNIGDEAIL---TCVVCTGYNRCVVDLYCYVMNTMAERVSWQAEEVAWGDFVPFNAVQASVDLSIQRLVSDGSWPGRYPPIQSSYNGVFPKDEFSSIRNWDSWDYVPDGLLVWEAWLRYL 448
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A7S2NSK3_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSK3_9STRA) HSP 1 Score: 130 bits (328), Expect = 9.710e-32 Identity = 81/223 (36.32%), Postives = 114/223 (51.12%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRN----------EKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVV-APGERVRWQEDEVEWGSYISWEEVNAK--------VSSG-----------------------AWEFVPDGLQVWGHYLSWM 643
+V+ VD+ G + +PR VH N+LHRG G++V E +VY H+RTSTKR+FPS+YDMF+GGVS E A+ TA RE+ EELGL + G D + + C++ T +NRC+V+VF Y A E ++WQE+EV WG Y+S+ + A + G W+FVPDGL VW + W+
Sbjct: 304 LVEMVDSVGNPLGIIPRDLVHKLNLLHRGIGIVVAKDCHIVQGTSTELPDVYVHQRTSTKRIFPSLYDMFVGGVSEAGEEAMVTASREVAEELGL-----------QRGLDGALSEPLFK--CVICTSYNRCIVTVFTYRCNAKEEILKWQEEEVAWGDYVSYPIIEAAAQLSIERLIEGGKWPGKQQGPLGPLQLEYNDGEWKTWDFVPDGLLVWEAWKEWL 513
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A1Z5JA98_FISSO (Nudix hydrolase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA98_FISSO) HSP 1 Score: 129 bits (325), Expect = 9.850e-32 Identity = 81/227 (35.68%), Postives = 113/227 (49.78%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVR-------NEKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVV-APGERVRWQEDEVEWGSYISWEEVNAKVSSG-----------------------------------------AWEFVPDGLQVWGHYL 634
MV+ VD G V+ +PR VH N+LHRG G+ V N++ ++Y HRRT TKR+FPS+YDMF+GGVS E A TA RE++EELGL R R R L +C+V T +NRCVV +F Y++ E ++WQ++EV WGS++ ++ + A +W+FVPDGL VW +L
Sbjct: 216 MVEMVDRTGAVLGHVPRKLVHQHNILHRGIGIFVTKDDPMEGNQRPDLYTHRRTETKRIFPSLYDMFVGGVSLAGEDAFITAQREVEEELGLS-CRDHLRP---------ERLL----QCVVCTAYNRCVVDLFVYLMNTKEESIKWQDEEVAWGSFVPYKTIEAAADRSIHRLAERGEWPGRYPPIQSSRMGKLDPEDETIRFEGAMEWTSWDFVPDGLLVWEAWL 428
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A2E3A4P0_9BACT (NUDIX hydrolase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E3A4P0_9BACT) HSP 1 Score: 122 bits (305), Expect = 3.170e-31 Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVVAPGERVRWQEDEVEWGSYISWEEVNAKVSSGAWEFVPDGLQVWGH 628
+VD +D + RV+ R + N+LHRG G++ + G +Y HRRT TK VFP MYDMF+GGV E A RE+ EELG+ EG ++ G NR +V+V Y V ++R Q +EVEWGSY+S EE+ AK+ G W FVPDGL++W H
Sbjct: 11 LVDLIDEQDRVVGWARRERIRRLNLLHRGVGILCLDPDGRIYVHRRTETKDVFPGMYDMFVGGVVGKGEDRDLAAAREIAEELGI-----------EGPQPEPICRYLYLGPL------NRSLVAV--YKVTWEGKIRHQPEEVEWGSYMSIEEIEAKI--GEWNFVPDGLEIWNH 165
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: K0R8X5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8X5_THAOC) HSP 1 Score: 128 bits (321), Expect = 3.390e-31 Identity = 74/182 (40.66%), Postives = 103/182 (56.59%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKG-----------EVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVVAPG-ERVRWQEDEVEWGSYISWEEVNAKVSSGAWEFVPDG 610
+VD V + G+V+ S+PR VH N+LHRG G+++ + +VYCH+RT TKRVFPS+YDMF+GGVS + E + TA RE+ EELG+ R N E G D+ S +C + T +NRCVVS F Y E + WQE+EV+WG ++ ++ V V DG
Sbjct: 198 LVDMVCSDGQVLGSVPRNLVHKYNLLHRGIGMIISKDDNIFETFRTGRLPQVYCHQRTDTKRVFPSLYDMFVGGVSASFERSRLTAAREVAEELGM--KRALNLMEE--GLDDESPLSQELFQCTIATSYNRCVVSFFTYTCDTSVESLAWQEEEVQWGQFVPYDIVEESADLSIERLVNDG 375
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A2E6NN27_9BACT (NUDIX hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6NN27_9BACT) HSP 1 Score: 121 bits (303), Expect = 5.640e-31 Identity = 73/176 (41.48%), Postives = 97/176 (55.11%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLGPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVVAPGERVRWQEDEVEWGSYISWEEVNAKVSSGAWEFVPDGLQVWGH 628
+VD +D + RVI R + N+LHRG G++ + G +Y HRRT TK VFP MYDMF+GGV E A RE+ EELG+ EG ++ G NR +V+V+ V GE +R Q +EVEWGSY+ EE+ AK+ G W FVPDGL++W H
Sbjct: 7 LVDLIDEQDRVIGWARRERIRKLNLLHRGVGILCYDPAGRIYVHRRTETKDVFPGMYDMFVGGVVGRGEARDLAAAREISEELGI-----------EGPTPEPLCRYLYLGPL------NRSLVAVYK-VTWDGE-IRHQSEEVEWGSYLDIEEIEAKI--GEWSFVPDGLEIWTH 161
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A7S0GKM9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKM9_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.950e-30 Identity = 86/233 (36.91%), Postives = 110/233 (47.21%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKG-----------------EVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGL-GPLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVVA-PGERVRWQEDEVEWGSYISWEEVN--AKVSSGA--------------------------------WEFVPDGLQVWGHYLSW 640
+V+ VD G + +PR VH N+LHRG GVMV + + VY HRRT KRVFPS+YDMF+GGVS EP TA REL EELGL LRT N G D + C V T +NRCVVS+F Y + + + WQE+EV WG+++ + V A++S W+FVPDGL VW + W
Sbjct: 9 LVEMVDGSGTPLAMVPRELVHRFNLLHRGIGVMVFDTRNAGDGDXXXDVRSDLRIPRVYVHRRTDHKRVFPSLYDMFVGGVSGAGEPPELTARRELAEELGLVRVLRTTN------GDDTHQQLSEMLFRCTVCTSYNRCVVSMFAYTMDNQRDVISWQEEEVAWGTFVPYPMVQQAARLSIDRLKSRNAWPGDDFSDGDLQTVDCLDIKGTDWKEWDFVPDGLLVWEAWEQW 235
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Match: A0A7X8XLG5_9BURK (NUDIX domain-containing protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XLG5_9BURK) HSP 1 Score: 118 bits (296), Expect = 6.100e-30 Identity = 77/187 (41.18%), Postives = 99/187 (52.94%), Query Frame = 2
Query: 101 MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKGEVYCHRRTSTKRVFPSMYDMFIGGVSTTMEPALTTALRELDEELGLG--PLRTGNRSTEEGGGDNGSRALVHRGECLVQTGHNRCVVSVFDYVVAPGERVRWQEDEVEWGSYISWEEVNAKVSSGAWEFVPDGLQVWGHYLSWMASTP 655
+VD VD R++ PR V N+LHRG G++ RN +GEVY HRRT TK VFP +YDMF+GG+ + E L A RE+ EELG+ PL H L Q HNR V VF V + Q+ E+EWG +I EE+ A S E VPDGL+++ YL+ AS P
Sbjct: 4 IVDLVDPADRIVGRAPRPEVRRLNLLHRGVGILCRNPRGEVYVHRRTPTKDVFPHLYDMFVGGMVASGETYLQAATREIAEELGVTGVPLEF---------------LFAH----LYQGPHNRAWVHVFQ--VCWDGPICHQDSEIEWGGWIPEEELEAW--SRRVEVVPDGLEIYRRYLAEKASRP 167 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1260.1968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1260.1968.1 >prot_F-serratus_M_contig1260.1968.1 ID=prot_F-serratus_M_contig1260.1968.1|Name=mRNA_F-serratus_M_contig1260.1968.1|organism=Fucus serratus male|type=polypeptide|length=187bp MVDWVDTRGRVICSLPRTTVHACNVLHRGAGVMVRNEKGEVYCHRRTSTKback to top mRNA from alignment at F-serratus_M_contig1260:258676..260559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1260.1968.1 ID=mRNA_F-serratus_M_contig1260.1968.1|Name=mRNA_F-serratus_M_contig1260.1968.1|organism=Fucus serratus male|type=mRNA|length=1884bp|location=Sequence derived from alignment at F-serratus_M_contig1260:258676..260559+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1260:258676..260559+ >mRNA_F-serratus_M_contig1260.1968.1 ID=mRNA_F-serratus_M_contig1260.1968.1|Name=mRNA_F-serratus_M_contig1260.1968.1|organism=Fucus serratus male|type=CDS|length=1122bp|location=Sequence derived from alignment at F-serratus_M_contig1260:258676..260559+ (Fucus serratus male)back to top |