mRNA_F-serratus_M_contig126.1956.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A6H5JE22_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE22_9PHAE) HSP 1 Score: 286 bits (733), Expect = 1.520e-92 Identity = 144/215 (66.98%), Postives = 169/215 (78.60%), Query Frame = 2
Query: 35 GC*LKQSKRCPRSDNMRYDLFSQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDERMGDPTFRERAEQRRRTQSTGSRG------QRWSRAAGGRTQMPPILRAFEFATHPRVLMVGLPLACVGYLVFADHEGEEPATITKVDAWLNPATNRWETPAPWNEEFRKRRHLTQKVDRSIVHESGRR 661
GC L Q +R M+ DLF+QDHY+VLGV R+A++ TIREAYL+LVK +HPD++KGA S ++FKAIASAWEVMGDKSKRA+YDERM DP FR R E R+R Q G G +R G T+MPPILRAFEFATHPRVLMVG+PLACVGY++F DHE E P + KVDAWLNP+T RWETPAPW+EEFRKRRHL QKVDRSIVHE+G+R
Sbjct: 39 GCCLDQGQR------MKSDLFAQDHYRVLGVDRNATHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMADPAFRHRTEYRQR-QGGGPEGAHRNGGRRSYAPPRGHTRMPPILRAFEFATHPRVLMVGIPLACVGYMIFGDHESEVPGSSVKVDAWLNPSTQRWETPAPWDEEFRKRRHLVQKVDRSIVHEAGKR 246
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: D7G772_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G772_ECTSI) HSP 1 Score: 181 bits (459), Expect = 8.270e-53 Identity = 94/140 (67.14%), Postives = 111/140 (79.29%), Query Frame = 2
Query: 80 MRYDLFSQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDERMGDPTFRERAEQRRR-------TQSTGSRGQRWSRAAGGRTQMPPILRAFEFATHPRVLMVGLPLACV 478
M+ DLF+QDHY+VLGV R+A+++TIREAYL+LVK +HPD++KGA S D+FKAIASAWEVMGDKSKRA+YDERM DP FR R E R+R Q TG G+R G T+MPPILRAFE ATHPRVLMVG+PLACV
Sbjct: 1 MKSDLFAQDHYRVLGVDRNATHETIREAYLRLVKKHHPDVSKGAQSEDQFKAIASAWEVMGDKSKRALYDERMADPAFRHRTEYRQRQGGAPGGAQRTG--GRRSYAPPRGHTRMPPILRAFELATHPRVLMVGIPLACV 138
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A4D9DC63_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC63_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.890e-19 Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 2
Query: 98 SQDHYKVLGVSRDASYDTIREAYLKLVKTYHPD--INKGAGSADRFKAIASAWEVMGDKSKRAMYDERM-----------GDPTFRERAEQRRRTQST-GSRGQRWSRAAGGRTQMPPILRAF---EFATHPRVLMVGLPLACVGYLVFADHEGEEPATITKVDAWLNPATNRWETPAPWNEEFR 601
++D+Y VLGV RD+S + I+ Y +L HPD + S +RFKA++ A++V+ D +R + DE + GD F +R RR +S GSR GG + RAF E A PRVL++G+ LA + Y+ E ++ V AW N T RWETPAPWN ++R
Sbjct: 7 TKDYYSVLGVPRDSSDEAIKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRLAGIRRPRSPPGSR-------KGGFSSS----RAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDPGHSSDLLVPAWYNQRTKRWETPAPWNPDYR 180
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A0R2DIF1_9LACO (Chaperone protein DnaJ n=1 Tax=Loigolactobacillus rennini DSM 20253 TaxID=1423796 RepID=A0A0R2DIF1_9LACO) HSP 1 Score: 89.7 bits (221), Expect = 3.720e-16 Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 2
Query: 98 SQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE 292
S+D+YKVLGVSRDAS D I+ AY KL K YHPD+NK G+ ++FK I+ A+EV+GDK KRA YD+
Sbjct: 4 SKDYYKVLGVSRDASQDEIKHAYRKLSKKYHPDLNKAPGAEEKFKEISQAYEVLGDKDKRAQYDQ 68
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A264W5L5_9BACL (Chaperone protein DnaJ n=3 Tax=Planococcaceae TaxID=186818 RepID=A0A264W5L5_9BACL) HSP 1 Score: 84.7 bits (208), Expect = 1.790e-14 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 2
Query: 101 QDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE 292
+D+Y+VLGVS+ AS D I++AY KL K YHPDINK AG+AD+FK I+ A+EV+ D+ KRA YD+
Sbjct: 4 RDYYEVLGVSKTASQDEIKKAYRKLSKQYHPDINKEAGAADKFKEISEAYEVLSDQEKRAQYDQ 67
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A2M6ZCR3_9DELT (Cytochrome C biogenesis protein (Fragment) n=1 Tax=Desulfobacterales bacterium CG07_land_8_20_14_0_80_52_14 TaxID=1973982 RepID=A0A2M6ZCR3_9DELT) HSP 1 Score: 77.8 bits (190), Expect = 2.900e-14 Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 2
Query: 101 QDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE-----RMGDP 307
+D+Y+ LGVS++AS + I+ AY KL + YHPDINKGAGS D+FK I A EV+ D KR YD+ + GDP
Sbjct: 6 KDYYETLGVSQNASQEEIQRAYRKLARKYHPDINKGAGSEDKFKEINEAHEVLKDPEKRRKYDQLGRHWQQGDP 79
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: UPI001D09B877 (molecular chaperone DnaJ n=1 Tax=Lentilactobacillus sp. IM3328 TaxID=2883998 RepID=UPI001D09B877) HSP 1 Score: 82.8 bits (203), Expect = 8.210e-14 Identity = 37/67 (55.22%), Postives = 53/67 (79.10%), Query Frame = 2
Query: 92 LFSQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE 292
+ ++D+Y++LGVSRDAS D I++AY KL K YHPD+NK G+ ++FK I A+EV+GD +KRA YD+
Sbjct: 1 MANKDYYEILGVSRDASNDEIKKAYRKLSKKYHPDLNKEPGADEKFKEITEAYEVLGDATKRANYDQ 67
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: UPI000375C364 (DnaJ domain-containing protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI000375C364) HSP 1 Score: 81.6 bits (200), Expect = 1.080e-13 Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = 2
Query: 101 QDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE 292
+D+YK+LGVSRDAS DTI++AY KL + YHPD++K A + +RFK I A+EV+GD KR YD+
Sbjct: 4 KDYYKLLGVSRDASQDTIKKAYRKLARKYHPDVSKEADAEERFKEINEAYEVLGDAGKRRAYDD 67
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A0R2CVR2_9LACO (Chaperone protein DnaJ n=1 Tax=Lentilactobacillus senioris DSM 24302 = JCM 17472 TaxID=1423802 RepID=A0A0R2CVR2_9LACO) HSP 1 Score: 82.0 bits (201), Expect = 1.460e-13 Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 92 LFSQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE 292
+ ++D+Y+VLGVSRDAS D I++AY KL K YHPDINK + +FK + A+EV+GDK KRA YD+
Sbjct: 1 MANKDYYEVLGVSRDASDDEIKKAYRKLSKKYHPDINKAPDAEAKFKEVTEAYEVLGDKQKRANYDQ 67
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Match: A0A1G9XX10_9BACI (Chaperone protein DnaJ n=5 Tax=Bacillaceae TaxID=186817 RepID=A0A1G9XX10_9BACI) HSP 1 Score: 81.6 bits (200), Expect = 1.970e-13 Identity = 35/67 (52.24%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 92 LFSQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFKAIASAWEVMGDKSKRAMYDE 292
+ +D+Y++LGVS+DAS D I++AY KL + YHPD+NK A +AD+FK A+EV+GD+ KR YD+
Sbjct: 1 MSKRDYYEILGVSKDASKDEIKKAYRKLARKYHPDVNKEADAADKFKEAKEAYEVLGDEQKRTQYDQ 67 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig126.1956.1 >prot_F-serratus_M_contig126.1956.1 ID=prot_F-serratus_M_contig126.1956.1|Name=mRNA_F-serratus_M_contig126.1956.1|organism=Fucus serratus male|type=polypeptide|length=195bp MRYDLFSQDHYKVLGVSRDASYDTIREAYLKLVKTYHPDINKGAGSADRFback to top mRNA from alignment at F-serratus_M_contig126:507092..513073- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig126.1956.1 ID=mRNA_F-serratus_M_contig126.1956.1|Name=mRNA_F-serratus_M_contig126.1956.1|organism=Fucus serratus male|type=mRNA|length=5982bp|location=Sequence derived from alignment at F-serratus_M_contig126:507092..513073- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig126:507092..513073- >mRNA_F-serratus_M_contig126.1956.1 ID=mRNA_F-serratus_M_contig126.1956.1|Name=mRNA_F-serratus_M_contig126.1956.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig126:507092..513073- (Fucus serratus male)back to top |