mRNA_F-serratus_M_contig126.1935.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig126.1935.1
Unique NamemRNA_F-serratus_M_contig126.1935.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig126.1935.1 vs. uniprot
Match: D7G6V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6V0_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.320e-77
Identity = 177/428 (41.36%), Postives = 222/428 (51.87%), Query Frame = 2
Query:  239 QNIVTYVGNACHKAMIEVDTAARTMGEEGMKDAILDGIKAIREALDAVSSRLPYDEGAQKEYAQRFLEATKDGAEGPDTPDLRHGP----LVFDTEKMTGIINGDEGT--------EGAVPPRDM------------PCTEQDIVFALGWVRTIISDVQTVLLELDDGDLEELSQRTLVSLRIVVGYFKRTHRTLTRLGLAPKQELSTEKPTFLGDD-------------------------------VDIHKNREGLPWEPLTPKVLEGGQWLVAKGKRSPLIAALVLALAMPVLPMVLPVVFFFGAPVLVGD------VVLQWGASTHVGRVVSRGVWNVFELLGLGWMARKLARKQVWKLGKRELERAGGVVGLTLSAGKGALWTVGHPIEATKRVTGLAVEAGRAVWHAAVWLGGVLATVREGV 1339
            +N+     N     ++  D   R +GE+ MK+ I DGI A+R AL+ VS  LP DE  ++EYAQRFLEA+++G  G   P  R G     L+FD    T    G + +        EG V P  M            P TEQDIV ALGWVRT+ISDVQ VLLE DD DLEEL+Q TL+SLRI+VGY K THR+L +L   P Q         +  D                                D H+   GLPW+PL P++L+  + L  +GK  P  AA+VLA A+P          F G               LQWGA+T VGR V  G  N  EL  LGW+A KLA KQ  +L  +EL+RAGGV GL   AG+GALWT  HP+EA     G+A +A  A +  AVW+G +LATVRE V
Sbjct:   24 ENVAITALNFLCVLIVRADKGTRDIGEQHMKEIIADGIGAVRRALEEVSRHLPQDEYTRREYAQRFLEASREG--GRAQPSERRGQGHMALLFDATTSTTPEGGRDESHESVVNSIEGQVSPHQMRRVGDEFGALQLPYTEQDIVSALGWVRTMISDVQNVLLEFDDSDLEELAQMTLISLRILVGYAKSTHRSLAQLCRVPFQPRRERARMAVHADPNNXXXXXXXXXNPAAARVGELFQVDEXXXXXDGHEGG-GLPWDPLAPRLLQEARRLAEEGKERPFTAAVVLAAALP----------FSGXXXXXXXXXXXXXAALQWGAATPVGRTVGHGTKNAVELGKLGWVASKLATKQTLRLASQELDRAGGVTGLACRAGEGALWTARHPVEAAMATVGMAADAASAAYEQAVWMGDLLATVREEV 438          
BLAST of mRNA_F-serratus_M_contig126.1935.1 vs. uniprot
Match: A0A7S2NZ29_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZ29_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.310e-5
Identity = 93/438 (21.23%), Postives = 168/438 (38.36%), Query Frame = 2
Query:  146 FQTLRFKIMSDDSPRVELDSKRLNLGDPALLQNIVTYVGNACHKAMIEVDTAARTMGEEGMKDA--ILDGIKAIREALDAVSSRLPYDEGAQKEYAQRFLEATKDGAEGPDTPDLRHGPLVFDTEKMTGIINGDEGTEGAVPPRDMPCTEQDIVFALGWVRTIISDVQTVLLELDDGDLEELSQRTLVSLRIVVGYFKRTHRTLTRLGLAPKQELSTEKPTFLGDDVDIH----------------------KNREG----------------LPWEPLTPKVLEGGQWLVAKGKRSPLIAALVLALAMPVLPMVLPVVFFFGAPVLVGDVVLQWG----ASTHVGRVVSRGVWNVFELLGLGWMARKLARKQVWKLGKRELERAGGVVGLTLSAGKGALWTVGHPIEATKRVTGLAVEAGRAVWHAAVWLGGVLATV 1327
            F   + ++++ D    E+ +        A LQ I   + NA H     +D++ R +G    + A  + DG+  I     A+S R   +E    +YA ++    +D      + +            ++ + N                  +DI+ A+    T++ DV+  L  +   + +E+ +  +    + V   +  H T+T   L  + E+ +       DD  I                       + RE                 + W PL P  +E G+  +   K  PL+A    ALA+ + P  L   F  G P+L  D ++Q G    A   +   + +G    F+L  L ++  KL  KQ  ++GKR+++R GGV  +    G  AL    +P++      G  ++  R    A   +GG ++TV
Sbjct:    4 FSNTKKQLLASDREECEMRASEQRDDAAAFLQAIGQVLSNAEHMLDDAMDSSDR-LGSAMQRFANDLADGLHDI-----ALSLRKEREENDGADYAVKYRIHFEDAQRAAQSANAHQQXXXXQPYSISNLSN------------------EDIMEAVNSAETLLLDVEDALRSVTKDEAQEMGEVAISVAHMFVWMLQCVHSTITPDELLFQNEVHSFDKDRDDDDGRIEILDEEDNAGILNXXXXXXXXXRETRENGTTKSYSSSSDAPRMRVLWPPLAPAAIEAGKNGIDCAKDRPLVAV---ALALVLWPTALFTAFIAG-PILTTDWLVQKGYDAVADGPIVTNIEQGAAGAFQLGRLYFLCGKLVIKQGIRVGKRQIDRRGGVQNVLQDLGGQALNCAMNPVQ----TVGAVIDGARGGIDA---IGGFISTV 406          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6V0_ECTSI1.320e-7741.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2NZ29_9STRA7.310e-521.23Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig126contigF-serratus_M_contig126:8111..15775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score269.2
Seed ortholog evalue3e-69
Seed eggNOG ortholog2880.D7G6V0
Hectar predicted targeting categoryother localisation
EggNOG OGs2EWU7@1,2SYK9@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_012150.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2371
Cds size1212
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929189.8426564-UTR-F-serratus_M_contig126:8110..82791622929189.8426564-UTR-F-serratus_M_contig126:8110..8279Fucus serratus maleUTRF-serratus_M_contig126 8111..8279 +
1690962742.1879714-UTR-F-serratus_M_contig126:8110..82791690962742.1879714-UTR-F-serratus_M_contig126:8110..8279Fucus serratus maleUTRF-serratus_M_contig126 8111..8279 +
1622929189.9962304-UTR-F-serratus_M_contig126:14601..152831622929189.9962304-UTR-F-serratus_M_contig126:14601..15283Fucus serratus maleUTRF-serratus_M_contig126 14602..15283 +
1690962742.2506647-UTR-F-serratus_M_contig126:14601..152831690962742.2506647-UTR-F-serratus_M_contig126:14601..15283Fucus serratus maleUTRF-serratus_M_contig126 14602..15283 +
1622929190.0073102-UTR-F-serratus_M_contig126:15467..157751622929190.0073102-UTR-F-serratus_M_contig126:15467..15775Fucus serratus maleUTRF-serratus_M_contig126 15468..15775 +
1690962742.2679582-UTR-F-serratus_M_contig126:15467..157751690962742.2679582-UTR-F-serratus_M_contig126:15467..15775Fucus serratus maleUTRF-serratus_M_contig126 15468..15775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929189.8568647-CDS-F-serratus_M_contig126:8279..84421622929189.8568647-CDS-F-serratus_M_contig126:8279..8442Fucus serratus maleCDSF-serratus_M_contig126 8280..8442 +
1690962742.1989605-CDS-F-serratus_M_contig126:8279..84421690962742.1989605-CDS-F-serratus_M_contig126:8279..8442Fucus serratus maleCDSF-serratus_M_contig126 8280..8442 +
1622929189.8662744-CDS-F-serratus_M_contig126:12501..126551622929189.8662744-CDS-F-serratus_M_contig126:12501..12655Fucus serratus maleCDSF-serratus_M_contig126 12502..12655 +
1690962742.2076862-CDS-F-serratus_M_contig126:12501..126551690962742.2076862-CDS-F-serratus_M_contig126:12501..12655Fucus serratus maleCDSF-serratus_M_contig126 12502..12655 +
1622929189.876572-CDS-F-serratus_M_contig126:12825..129311622929189.876572-CDS-F-serratus_M_contig126:12825..12931Fucus serratus maleCDSF-serratus_M_contig126 12826..12931 +
1690962742.2166116-CDS-F-serratus_M_contig126:12825..129311690962742.2166116-CDS-F-serratus_M_contig126:12825..12931Fucus serratus maleCDSF-serratus_M_contig126 12826..12931 +
1622929189.88532-CDS-F-serratus_M_contig126:13240..133391622929189.88532-CDS-F-serratus_M_contig126:13240..13339Fucus serratus maleCDSF-serratus_M_contig126 13241..13339 +
1690962742.2254894-CDS-F-serratus_M_contig126:13240..133391690962742.2254894-CDS-F-serratus_M_contig126:13240..13339Fucus serratus maleCDSF-serratus_M_contig126 13241..13339 +
1622929189.9710832-CDS-F-serratus_M_contig126:13706..141021622929189.9710832-CDS-F-serratus_M_contig126:13706..14102Fucus serratus maleCDSF-serratus_M_contig126 13707..14102 +
1690962742.2336633-CDS-F-serratus_M_contig126:13706..141021690962742.2336633-CDS-F-serratus_M_contig126:13706..14102Fucus serratus maleCDSF-serratus_M_contig126 13707..14102 +
1622929189.9814796-CDS-F-serratus_M_contig126:14307..146011622929189.9814796-CDS-F-serratus_M_contig126:14307..14601Fucus serratus maleCDSF-serratus_M_contig126 14308..14601 +
1690962742.2421532-CDS-F-serratus_M_contig126:14307..146011690962742.2421532-CDS-F-serratus_M_contig126:14307..14601Fucus serratus maleCDSF-serratus_M_contig126 14308..14601 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig126.1935.1prot_F-serratus_M_contig126.1935.1Fucus serratus malepolypeptideF-serratus_M_contig126 8280..14601 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig126.1935.1

>prot_F-serratus_M_contig126.1935.1 ID=prot_F-serratus_M_contig126.1935.1|Name=mRNA_F-serratus_M_contig126.1935.1|organism=Fucus serratus male|type=polypeptide|length=404bp
MSDDSPRVELDSKRLNLGDPALLQNIVTYVGNACHKAMIEVDTAARTMGE
EGMKDAILDGIKAIREALDAVSSRLPYDEGAQKEYAQRFLEATKDGAEGP
DTPDLRHGPLVFDTEKMTGIINGDEGTEGAVPPRDMPCTEQDIVFALGWV
RTIISDVQTVLLELDDGDLEELSQRTLVSLRIVVGYFKRTHRTLTRLGLA
PKQELSTEKPTFLGDDVDIHKNREGLPWEPLTPKVLEGGQWLVAKGKRSP
LIAALVLALAMPVLPMVLPVVFFFGAPVLVGDVVLQWGASTHVGRVVSRG
VWNVFELLGLGWMARKLARKQVWKLGKRELERAGGVVGLTLSAGKGALWT
VGHPIEATKRVTGLAVEAGRAVWHAAVWLGGVLATVREGVSAGQPGRGAT
HDS*
back to top

mRNA from alignment at F-serratus_M_contig126:8111..15775+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig126.1935.1 ID=mRNA_F-serratus_M_contig126.1935.1|Name=mRNA_F-serratus_M_contig126.1935.1|organism=Fucus serratus male|type=mRNA|length=7665bp|location=Sequence derived from alignment at F-serratus_M_contig126:8111..15775+ (Fucus serratus male)
GGGATTGGCCACCGTGTAAAGTAGTTTTTTCGGGTTGGCAACCAATACGC TGAATGTGAGAAACAACAACAACAACAACATAACCATTGCCGTGTCAGGT TGTGGAGCAACAGTCTTTATCCTTAAGCTCTAAGTCATCGGAGAGTTTCA AACCCTTAGGTTTAAGATCATGTCTGATGATTCCCCGCGAGTGGAGCTTG ATTCCAAGCGACTGAACCTTGGAGATCCCGCTCTGTTGCAAAACATAGTT ACCTACGTGGGGAACGCCTGTCACAAAGCGATGATTGAGGTGGACACGGC CGCGCGCACAATGGGCGAAGAGGGTATGAAAGGTGAGCATTCAGCAGTAC CGAACAACACTGGTGTCCATGGCTGCAGTCCTTGAGCCAGTTGATTCAAA TGCGTATTGCCAGGTGGAGTTTGTTTATCTGTAGAGTCGATGCCGAAGCC ACCCCCAACTACAGTAGGGACGATTGCACCAAAAAAAGATCAGGATACAA ATTCCCAAAATATGCTCGCCCCGGTAGCTCAGTTGGTAACCTCGAAACCT TCTGACACGTGGGGACGTGAATTCGAATCCCGGTAACTGGGATTTTTCTT CCCAAAAAATAAAAATAAAAATGGCCAACAAGTGGAGAACGATAAAATCG TTAGTACACAAAATTCGACTTCACGATAGACGAGGTAAAGGAACGGCTGG ATCCTTCTCGCGAGAAAATTGAGGCAAGCACCGTAAATCCTGTGTGACGT TCTTCCTGTGTGACCTGGCTGGTACGTCCAGCAAGCCTAACGTCCAGAAT AAATGGGAAGAAAACAAAACACACAAGCGTGTTAGACCACCACACGAGGA TAAATTCCCAAAAAATGCTCGCCCCGGTAGCTCAGCTAGTAACCTCGAAA TCTTCCGACACGTTGGGACGTGAGTTCGAATCCCGGTGACTGGAATTTTT CCTCCCACAAAATTCGACTTAACGGTCGACGAGGGAAAGGAACGGCTGAA TCCTTCTCGGGAGAAAAATTAAGGCAAGCACCGCAGAAGGAAAGTGGATG AGAAATCCTGTGTGATCTTCCCCTGTGTGACCCCGACTGGTACGCCCAAC AAGCCTGACGTCCAGAATAAATGGGAAGAAAACACAACAAGACACCGAGT GTTGGACCATCACACGACATATCGGTACTTGCGTAAGTTTAGGCCATCTT TACACGTATCGTATTTGTATCTGGAATATTATTGTATTTGGTGCTTATCG TATTTCGAATATTTGCGGAGCTCAAATCCAACAGGTCTATTTACAGGTAC ATGGAGGTTTGCAACGATTTGAACGGAGTGTGTGCATTTTTCTGGCCGTC TGCTTTCAAAATACATAAATGCATCGCACGCGCCTCGCCAACAGGTAGCA GCACGGCAACTTGAGAGTGGACCATTATACAATAGATGGACCATCGCCAT CGTGGCCGAGTCTCTGTTACAACAACAGAACGCTCGTCCTTCAGGTTTAA ATCAATTACACGTGTTGTACTGGACTGTCTGCACAGGCCAGTATAGTCTA TCTGTATTACAGCATACTACAGTCTACTGTATTACAGTATAGTACAGTCT ACTGTATGTAGTACAGTACGGTCTTCGGTCTGTACTGGAGTCATCTCGAA CCCAAAGATACACCTCGCATTTTTAGCAGAAATAGCAACAACTTTCACTG TCCTTCAGCACTACAGGTAAACACTGCCTCCATGACATGTCCCTCGGACT CGCCGAGAACGCTTGACTCGGGAACCATCACCATCCTCGCTCTATTTTCC CTACGCCGTCTCCATGTCCTCTAGCCCGTCCAAAATCAGCGCCTACACGG CCAAGGTCCTGGCTCGTCGCCGTTGCTCGTAGGTCAAGAACACAACCAAA GCTACAGCGAGCGCTCCCCAGAGGCGTTCATCGCGGTCGTCCGACGCGAT GAGAGCAACCGACGCGTTGTGTAGATGCTCAAAGTGCTGTGTGCCGACGA CAGACCTCTCTGCCTCGATGGGAGCTCAACGTGTGCTGGGTTTACACCTA TGCTAGATGGTAACTTTGTACTTTCAAATGCACACGCCTACACGTCAAGT CGAATCCCGCAAATACAATCGTCCTCGGCTCCATCGTATTTGGGTCCCAA ATACGATGCGTGTAAATAGGCATATTGGATTTGAGGTCCCCAAATTCCCA GATCCAATTCCTATATTCCCCACATACGATACGTGTAAAGATGGTAGCCC CTATTTGCAGTTTAACACTGCAAATAGCGGCGTGCAGTTTAACTTCCGCC TCCAGTGAAAACCCCGGGATATTCGCCGGCAGCGTCCCCTTTTTGGTATT ATTTAATAATTTACAAACAAAACAATACACGTGTTCTATAGTCACAGCGT AGTAGAATGGTCGGTATTCGCTACTGATTATAAAAAGTCTCGCTGTTCAA GCCCCAGCGTCGAGAAAAATTTTATTCTTGGTCCGGGTTAGGGTTAGCGA TAGCGTTAGAAtTTTTTATTTTTCGCAGACGGGACATGAGTGGACCCAGC CATGAATTGGGTGCTCGCAGTCAGCTGGGGTAGGGGGGTCTGGGTTAGGG TTAGCGATAGCATGTGTGTTGAATTGGGACCTCGCAGTCAGCTGGGGTAG GGGGGTCTGGGTTAGGGTTAGCGATAGCATGTGTTTCAAAAAGGGTTTCT GAAGGTGTGGTTCTGGAGGCGGTAGTTAAACTGCACGCCGCTATTTGCAG TGTTAAACTGCAAATAGGGGTTACCGTGTAAAGATGGCCTTACAGTATAA CGGTAGGCTTGTCCCCGATATTGTACCGTTGACCCAATGCTACTATAAAT ATTAATACCATCGGGGAACCTGTTCAATGCCATAAAGAGGTTTTGTATTC GCAGTCCCATGATTCCACCCAAACGTTTTGACATTTCTCCCCCTGACTGG GGAATGCTCAGAAGGTCTAGATTGTTGTTGTTGTCTTCACATTAAAAACC GTTCCGATCTCTGTTCAGTACGTTCCAACATCCGTACTGGTCCAACTGAC GCGAACGCCTTCCGTGGTCACAGGCTAACTTCCCCAAAAGGGTATGTATG TATGTATGTATGTATGGTCATCACATGTAGCAGAGTATGGATCAACCTGG TGAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATAATATTC CCCTGTCCCCGTGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGC CGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGG TGCTTACTTACGGAATTCCTCCCGAGTTCCGCGGCGGCGTCCATTATGAA ACCGCCGTACGCCATCGGGTAAGTCCCGAGTTTATTAGGTCACGCAGTTG CGTACCGACGGCGTTCACTGCCTAAAGTTCGCCGGCACGGGGCCAGTGAA CCTCAAGGTAGTTCCGAACGGGTGCTGCCTTAGCAGGTCACCATGGACCA ATTAATTTGCGCCTCTCTTTCCCACCCCCACTATTGGTATGAGTGGGCAT GTTAAAAGTATCGGCGTGGTACATATGATAAGAAATGAAAGAGAAATAAA AGAACCCCAGAGAAGTCAACACACGCGATAATAGGACCCCCCCCCCCCCC CCCCCCCGAAAAAAAGGGCTCCAGACAGTCAGCTGTCGCAGGCGACATGT CGGACAAAGGGGATATATAGAGCCCATCGCTCCCACTCGACCCGCGAGGC CAAGCAAAATAATCAAGGATCACCAACCAAGACAAAAATAATATCACATG ATTCTATCCTTGTACCCCTACTAGGCCGAGGTGTATTCGCCGCCGGGTTT GCACCGGCCGATCAGATTTTTCTTTATAAACAGTATTATCTCTACTTGTA CGATTGATTCGGATGCACTCGGCAATATAGCACTTATTAATAGTATACAA CCTGTCCGACGAGAAAATAATAAATTAAATCAGGCAAGTGTATTTGGTAG AGGCCGAGCTAGATCTATACAGTAGCTCCACCGGTAGAGCTTACCAGCAG AACTCAACGCGGTTCTAATACTTCCTTGCAGGAAGTCCGACGAGCCGGGC GAGCGTCGAATAGGTTGACATATTGTGGTCAATGTTGTACACTCTTCAAC ACCGTTGCAGGGAGGACGTAATGGTTTTGTCTACTCGCATCTAAGTCAAC GATGGCAGCGAAGCGTTGCTCTGACCCGTAGTTTCACAAAATTCTGCGCT ACTTGTGCACTCAAAAATTACTCATAGATATGTCATTCCTATCTCTCCCC ATGTAACGTTGGCTATTGAACTCTAATGGTTACGTCCACTCGTTACGCCC ACCCCGTTTCGTGTATTGTAATAACGACACTCTGTCGGCAGATGCCATCC TGGACGGAATTAAGGCAATCCGCGAAGCTTTAGACGCGGTGTCCAGCCGC TTGCCTTACGATGAAGGCGCTCAAAAGGAATACGCGCAGCGCTTTCTAGA GGCGACGAAGGATGGAGCGGAAGGGCCAGACACCCCCGACCTCAGGTGAA GAGATGGCGGACGGCATATAAGGTCGTTGAATTACCCCTAGACTTCCGCA GTACTTAAACATTAGAGACAAGGTGGGGCGAAGTGAGAATACTACGTCTT CTCAAGCGATTATTTCGAAGTGAGGTCGACTCCTCGATTACTTCTTCCGT TTGGCACAACCGCAGGCATGGCCCTCTCGTTTTCGACACCGAGAAAATGA CGGGTATCATCAACGGCGATGAGGGCACCGAGGGAGCCGTGCCGCCGCGA GATATGCCCTGCACTGAGCAGGTTTGCCTTTTTTCGGGGGCGGTGTTGCG TCGTGATGTTACGGCTGTCTCTCGGCGCCATGTCGAGGTCACGCCAATGT CGCGCTTGCCGCGGCCTTTGCCGCTGCGACTGCAGTCACATGTTACAGGC GCTCCGTCGCTGTCAGAATTGCAGTCCAAATCATGCATAGTACGGTCTAC AAGTAGAGCCTATAGGGTTTGTTTTCACTGTAGTCAAGCGTCTTCGCACC TTGAGCTCTACCAGGCAAGATGAAGTAGCGGGTACAGTGTATAATATTCT TACTATCGCTATTGGTCCTCCTCACCGCAGGATATCGTTTTTGCGCTGGG GTGGGTGAGGACAATAATTTCCGACGTGCAGACCGTTCTTCTGGAGCTGG ATGATGGCGATCTAGAGGAGCTCTCTCAGGTTGGTTGTGTATCGAGGGTG TGCTTGTATTTGAAGCCCCCCAGTCGTTGGCATTCTAAGCAAGCTTGGTG TTTCTGGTGTGGGGCATCCTAAAGTAGTACGAAGTTTTAAAAAATAGTGA AATATTGACGTATTGTGAAGGTGACTTTGAGCGTAATCGCGTTCGGTTTT TCTCTTTGATTGTGAGGGCGCGGGGCAGCCCTTTCTGTGATTGCCTTTGT GAAGAGAGAAATGGCGCTGAGTCCATCCGAATCACGGACGGTGTAATTAG CCACGTGCACGATCGCTTGGACTGTGGTCACTTCGTAGCTCTTTACTCGC CTTTTTGCTCGTCATTGTCTAATGCGATGGTAATTGCAACGCTCAGAGGA CGCTGGTCAGTCTCCGAATCGTCGTCGGCTACTTCAAGCGCACCCATCGC ACCCTCACGCGACTGGGATTGGCACCAAAACAAGAGCTGTCAACAGAAAA ACCCACTTTTCTTGGAGATGATGTTGACATCCATAAAAACAGAGAAGGAC TCCCCTGGGAACCGCTGACACCCAAAGTGTTGGAAGGGGGTCAGTGGCTG GTGGCGAAGGGCAAGCGGAGTCCCTTGATCGCTGCGTTAGTCCTGGCGCT GGCGATGCCGGTTTTACCCATGGTTTTACCCGTGGTATTCTTCTTCGGAG CGCCGGTGCTGGTTGGAGATGTGGTTCTTCAGTGGGGGGCAAGCACTCAT GTCGGGAGGGTAGTATCACGAGGAGTGTGGAACGTCTTCGAGGTGAGCTC TGACGACGCGCTACGTGCTGCACTAAAGTATTCAAGTGGATAGAGAGAAT GACAGGTGTACAGTACATCACGAGGGAAAACTCTGGGCGTACGCGGTTTC ACGTGCATGCTCCTTTTCTGTTTGGATGATAATAGCTTGCACTCTCCGGC ATGGACCGCATGCGTCCGTTTATGTTGCGCTTTGATATTCTCCCCAGCTT CTCGGACTGGGCTGGATGGCACGCAAGCTGGCAAGGAAGCAGGTGTGGAA ACTGGGTAAACGGGAGCTTGAACGCGCTGGGGGCGTGGTTGGATTAACGC TTAGCGCGGGCAAGGGCGCGCTTTGGACGGTGGGACACCCGATCGAGGCC ACCAAGCGGGTTACGGGGTTGGCGGTAGAGGCCGGAAGAGCGGTGTGGCA CGCCGCGGTGTGGCTGGGTGGTGTGCTTGCTACTGTACGCGAGGGAGTTT CCGCCGGTCAACCCGGACGCGGCGCGACCCATGATTCGTGATGTTTAGGC GAACGAGAGAGTAGAGATCAATCTTGGATGAGGACAGGTATAACGGATGT TGACGCGTTACTCTCATCACTTGAATCTTCATCCCACGGTCGTGAATGCA CCGAATGCCCCCCTTCCCCAAATCGATGGCAGCATCACGTAGGCACGTTG TATTCGGCAGCATTACGCTAGTGTCAATTTGTAATATACAGTAGTTTAAA AGCTGGTTCACGAGCATGTGTACACCTCTTGTAAGTTTTTGGACAGAAAA TGATTTGACGTTTGTGCCGATGCATCACGTTCGCAAGGCTGCTTTTGTAG TTGACCTCTGTCCGCACGATATATGCACTCTCCAAGGTCGGGTGTTTCTC ACATTTTGTGTAGAAGAGAGCTGTTGTAAATTTTATATTTTGTATAACAC ACTGCTGTCCATAAGCCGTCAGGGTAAACTATTTGCGTATTCGTTTTTGG ACCGGAGTTGACATGTAGTACGAGTTAAACCTACTTTTGTTTTTATCCCG TATCTTCTCAGTGGTAGCATCAGAAGCCATCCCTCTTGCCCGGCCACCCT AAAACCTGGGTGTAAGGGGGGTGTTTGCCTGGTTGGTGAGAAACCCGACG AAGAGCTCCCCGGCATAGTAGGGGCGCGTGGAGATATTGTCAAGGACAGA GGGTACTATTTTGCATGATGTGCGTGGCTAATTTTGTCTTGCCCTTTTCA CAGCTCCAGGGTGTTAAGAGTAGGGATGGCCTGGTCGGCGGGAACCCGAC TATGAACACTCCCCGGCTTCGTAGGGGAGGGGTGTTAGCTTCTTCACGTT TAGGTTTTACTTGTATCGGTACTCCTTATACGGTAGTAAATTTTGGTCGT GACTCAGCTTCCGAGTTGGAGCATGAGCTCTACTTCATTTTGGGGGTTTT CCTGCGATAACCTGCTTGTTTCCCTGAACTCGGTATTTTTAGGAACGTGG GTCTTTTATTTCTTATTTTTTTATATACCTTATTTTGGGTTTAGCTCGTG ACCACGGAAATTCGTTTCTTTGCCTTGAGTAAGAAAGAGAAGGTGCTCGG ATTGAAGTCACAGTTATAAACAACTCTATATTGCAGACGGTGGGTCTGCG ACGTGTGGGCGGTGAACATTACGAGTAGAAATGGAAGCGCTAAAATGAAA TAATTATGCTTTCGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig126:8111..15775+

>mRNA_F-serratus_M_contig126.1935.1 ID=mRNA_F-serratus_M_contig126.1935.1|Name=mRNA_F-serratus_M_contig126.1935.1|organism=Fucus serratus male|type=CDS|length=2424bp|location=Sequence derived from alignment at F-serratus_M_contig126:8111..15775+ (Fucus serratus male)
ATGTCTGATGATTCCCCGCGAGTGGAGCTTGATTCCAAGCGACTGAACCT
TGGAGATCCCGCTCTGTTGCAAAACATAGTTACCTACGTGGGGAACGCCT
GTCACAAAGCGATGATTGAGGTGGACACGGCCGCGCGCACAATGGGCGAA
GAGGGTATGAAAGATGTCTGATGATTCCCCGCGAGTGGAGCTTGATTCCA
AGCGACTGAACCTTGGAGATCCCGCTCTGTTGCAAAACATAGTTACCTAC
GTGGGGAACGCCTGTCACAAAGCGATGATTGAGGTGGACACGGCCGCGCG
CACAATGGGCGAAGAGGGTATGAAAGATGCCATCCTGGACGGAATTAAGG
CAATCCGCGAAGCTTTAGACGCGGTGTCCAGCCGCTTGCCTTACGATGAA
GGCGCTCAAAAGGAATACGCGCAGCGCTTTCTAGAGGCGACGAAGGATGG
AGCGGAAGGGCCAGACACCCCCGACCTCAGATGCCATCCTGGACGGAATT
AAGGCAATCCGCGAAGCTTTAGACGCGGTGTCCAGCCGCTTGCCTTACGA
TGAAGGCGCTCAAAAGGAATACGCGCAGCGCTTTCTAGAGGCGACGAAGG
ATGGAGCGGAAGGGCCAGACACCCCCGACCTCAGGCATGGCCCTCTCGTT
TTCGACACCGAGAAAATGACGGGTATCATCAACGGCGATGAGGGCACCGA
GGGAGCCGTGCCGCCGCGAGATATGCCCTGCACTGAGCAGGCATGGCCCT
CTCGTTTTCGACACCGAGAAAATGACGGGTATCATCAACGGCGATGAGGG
CACCGAGGGAGCCGTGCCGCCGCGAGATATGCCCTGCACTGAGCAGGATA
TCGTTTTTGCGCTGGGGTGGGTGAGGACAATAATTTCCGACGTGCAGACC
GTTCTTCTGGAGCTGGATGATGGCGATCTAGAGGAGCTCTCTCAGGATAT
CGTTTTTGCGCTGGGGTGGGTGAGGACAATAATTTCCGACGTGCAGACCG
TTCTTCTGGAGCTGGATGATGGCGATCTAGAGGAGCTCTCTCAGAGGACG
CTGGTCAGTCTCCGAATCGTCGTCGGCTACTTCAAGCGCACCCATCGCAC
CCTCACGCGACTGGGATTGGCACCAAAACAAGAGCTGTCAACAGAAAAAC
CCACTTTTCTTGGAGATGATGTTGACATCCATAAAAACAGAGAAGGACTC
CCCTGGGAACCGCTGACACCCAAAGTGTTGGAAGGGGGTCAGTGGCTGGT
GGCGAAGGGCAAGCGGAGTCCCTTGATCGCTGCGTTAGTCCTGGCGCTGG
CGATGCCGGTTTTACCCATGGTTTTACCCGTGGTATTCTTCTTCGGAGCG
CCGGTGCTGGTTGGAGATGTGGTTCTTCAGTGGGGGGCAAGCACTCATGT
CGGGAGGGTAGTATCACGAGGAGTGTGGAACGTCTTCGAGAGGACGCTGG
TCAGTCTCCGAATCGTCGTCGGCTACTTCAAGCGCACCCATCGCACCCTC
ACGCGACTGGGATTGGCACCAAAACAAGAGCTGTCAACAGAAAAACCCAC
TTTTCTTGGAGATGATGTTGACATCCATAAAAACAGAGAAGGACTCCCCT
GGGAACCGCTGACACCCAAAGTGTTGGAAGGGGGTCAGTGGCTGGTGGCG
AAGGGCAAGCGGAGTCCCTTGATCGCTGCGTTAGTCCTGGCGCTGGCGAT
GCCGGTTTTACCCATGGTTTTACCCGTGGTATTCTTCTTCGGAGCGCCGG
TGCTGGTTGGAGATGTGGTTCTTCAGTGGGGGGCAAGCACTCATGTCGGG
AGGGTAGTATCACGAGGAGTGTGGAACGTCTTCGAGCTTCTCGGACTGGG
CTGGATGGCACGCAAGCTGGCAAGGAAGCAGGTGTGGAAACTGGGTAAAC
GGGAGCTTGAACGCGCTGGGGGCGTGGTTGGATTAACGCTTAGCGCGGGC
AAGGGCGCGCTTTGGACGGTGGGACACCCGATCGAGGCCACCAAGCGGGT
TACGGGGTTGGCGGTAGAGGCCGGAAGAGCGGTGTGGCACGCCGCGGTGT
GGCTGGGTGGTGTGCTTGCTACTGTACGCGAGGGAGTTTCCGCCGGTCAA
CCCGGACGCGGCGCGACCCATGATTCGTGACTTCTCGGACTGGGCTGGAT
GGCACGCAAGCTGGCAAGGAAGCAGGTGTGGAAACTGGGTAAACGGGAGC
TTGAACGCGCTGGGGGCGTGGTTGGATTAACGCTTAGCGCGGGCAAGGGC
GCGCTTTGGACGGTGGGACACCCGATCGAGGCCACCAAGCGGGTTACGGG
GTTGGCGGTAGAGGCCGGAAGAGCGGTGTGGCACGCCGCGGTGTGGCTGG
GTGGTGTGCTTGCTACTGTACGCGAGGGAGTTTCCGCCGGTCAACCCGGA
CGCGGCGCGACCCATGATTCGTGA
back to top