mRNA_F-serratus_M_contig1259.1932.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: D7FQQ5_ECTSI (4'-phosphopantetheinyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ5_ECTSI) HSP 1 Score: 349 bits (895), Expect = 1.250e-113 Identity = 192/341 (56.30%), Postives = 240/341 (70.38%), Query Frame = 3
Query: 3 KKVALRRW-TRATLLFLFSNFRAHSMHLCFRHVRHVCSLNGSVNFLEFQIRTCSVSSSHPQTCSTASLHDSRSFRDKWLSSGGSGAM-HAGAEGDSTVPTFCLPSASRLLTVMDKVLPVGRCVGITLPSVLTTEALRIASEELMPEEVSYCLGLPQALQPGFLGGRLAIRRALVGMEEAPSVPS--AILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYHGHIGVDIELPAVRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTVHTSEAGAWGDLKLSAGWIHLPDVLGQPLILTYCKAID 1013
+KVAL RW T A ++ L A SM C H R++ S + + +F R + +S+ P R K + G + +M H+ A G ST + S+L T MD++LP GRCVG+ LP LT + + A EEL+P+E++YCLGLP+ALQ GFLGGRLAIRRAL GME+ + S AILH+QDGAPVLP V+ASISHK+H+AVALVQ+G GH+G+DIELPAV+RR+DLRRRVLT RECDSLGGVDG+S++ EVLLRFSMKE+VYKA HP L RPLGFK+VEV P GG C V T+ GAWG L+LSAGW+ PDVLGQPL L+YCKA+D
Sbjct: 3 RKVALHRWATLAYVILLLCESPALSMAFCVHHSRYLRSASYARSFES--ARLAAATSTPP--------------RRKGMRRGRATSMLHSDACGGSTSASSSQVQLSQLPTAMDRILPFGRCVGVALPPTLTDDVMTAAGEELLPKEMAYCLGLPRALQLGFLGGRLAIRRALNGMEDVSAAASSQAILHNQDGAPVLPEGVSASISHKQHLAVALVQSGCEGHLGIDIELPAVQRRLDLRRRVLTPRECDSLGGVDGMSDQEEVLLRFSMKEAVYKAAHPFLHRPLGFKDVEVQPVRGGGCEVRTTTRGAWGGLRLSAGWMFFPDVLGQPLFLSYCKAVD 327
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A7S4T7K3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T7K3_9STRA) HSP 1 Score: 138 bits (347), Expect = 8.720e-33 Identity = 93/216 (43.06%), Postives = 130/216 (60.19%), Query Frame = 3
Query: 345 LPVGRCVGITLPSVLTTEALRIASEELMPEEVSYCLGLP-QALQPGFLGGRLAIRRALVGMEEA-----PSVPS---AILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYHGH--IGVDIELPAVRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTVHTS-EAGAWGDLK-LSAGW 953
LP G+CVG+ L + + A S+ L P+EV+Y + LP Q Q F GRLA+R AL+ + P+V + AIL D+ G P +P V SI+HK+ VALV + +GVD+E RR + RR+LT E +LG V+G+++E EVLLRFS+KESVYKA+HPLL + +GFKE E+ P T G TV+ + + GA L ++A W
Sbjct: 119 LPEGQCVGLRLCTNASPPAW--ISDVLHPKEVAYAMNLPSQTSQDTFFVGRLAMRHALLASHTSSFAALPAVSADDAAILKDEHGRPTMPKGVLGSITHKKKTGVALVSSASTRRRGVGVDLEQTCTGRR-SIARRILTEGEILNLGCVEGVTKEEEVLLRFSLKESVYKAMHPLLNQYIGFKEAEIIPHTNGTATVYINLKNGAHASLDCITAHW 331
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A7S2SQZ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQZ6_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.120e-29 Identity = 90/217 (41.47%), Postives = 120/217 (55.30%), Query Frame = 3
Query: 354 GRCVGITLPSVLTTEALRIASEELMPEEVSYCLGLPQALQPGFLGGRLAIRRALVGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTG----YHGHIGVDIE-LPAVRRRVDLRRRVLTARECDSLGGVD--GISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTVH-------TSEAGAWGDLKLSAGWIHL 962
G C+G+ LP L AL EL EEV++ L Q FLGGR+AIRRA+ G + A +V I GAPVL + + SISHKRH+AVALVQTG G IGVDIE L R + L +RVL E D LG ++ G++++ EVLL FS KE+VYKA+ P L R + F+EV G C+ +S + L ++ W+ +
Sbjct: 87 GLCLGVQLPDALADTAL---PPELHEEEVAFASDLSQIRAAEFLGGRVAIRRAM-GAKLAETV-GPIHRSSRGAPVLSNGIRGSISHKRHVAVALVQTGPCSPVGGRIGVDIEDLHPTRYKGRLAQRVLLEEEVDKLGSLESTGLTKDQEVLLAFSFKEAVYKAIDPFLERFVSFQEVVASFSPDGSCSARMVAPEFPSSTTESEPSLHITGSWVQV 298
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A838HLQ8_9BACT (4'-phosphopantetheinyl transferase superfamily protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838HLQ8_9BACT) HSP 1 Score: 122 bits (307), Expect = 1.800e-28 Identity = 82/203 (40.39%), Postives = 112/203 (55.17%), Query Frame = 3
Query: 345 LPVGRCVGITLPSVLTTEALRIASEELMPEEVSYCLGLPQALQPGFLGGRLAIRRALVGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYHGHIGVDIELPAVRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTVHTSEAGAWGDLKLSAGW 953
LP G CVG+ LP + A +A E+L +E ++ GLP + ++GGR+A+ RAL E A AIL + GAP LP +A S+SHK +AVALV +G+DIE V R ++ R VLT E L + EVLLRFS KE+VYKA+ P +RR + F+EV V P+ G V + G G ++ GW
Sbjct: 11 LPHGLCVGVRLPEP-SENAGELALEQLGADERAHAAGLPFRRRITWVGGRVALHRAL---ERAGQQAGAILATERGAPSLPPGIAGSVSHKEGLAVALVAPAAGWRVGIDIERMRVPR-AEIERHVLTEGERQELTALRQEERWREVLLRFSAKEAVYKALDPFVRRYVSFQEVTVRPEPQGGGRVQLALKGGEGPFQVEMGW 208
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A7S1GJ90_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJ90_CYCTE) HSP 1 Score: 125 bits (313), Expect = 5.420e-28 Identity = 87/211 (41.23%), Postives = 120/211 (56.87%), Query Frame = 3
Query: 330 VMDKVLPVGRCVGITL-------PSVLTTEALRIASE----ELMPEEVSYCLGLPQA-LQPGFLGGRLAIRRALVGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYHGH--------IGVDIELPAVRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTV 902
V D LP GRCVG+ L P L+ E + +S L P+EV++ + P+ + F GRLA+R AL E S ++IL DQ G P++P SISHKR++ VALV T +G+DIE +R D+ ++VLT E LG V+G++ E EVLLRFSMKES+YKA+HP+L + +GF+E EV P G +V
Sbjct: 97 VFDIELPEGRCVGVELMHPGPDHPDSLSPENIARSSHWIHAMLHPQEVAFGVSQPKEHARDSFFVGRLAMREAL--RLEQNSAHASILKDQHGRPIVPRGYLGSISHKRNVGVALVTTTSTTSDESETVEGVGIDIEQTLTKR--DIAKKVLTPTEISELGKVEGVTIEEEVLLRFSMKESLYKAMHPILCQYVGFQEAEVTPYPDGTASV 303
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A4D9CTH4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTH4_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.940e-27 Identity = 72/150 (48.00%), Postives = 97/150 (64.67%), Query Frame = 3
Query: 480 FLGGRLAIRRALVGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYH------GHIGVDIELPAVRRRVD-LRRRVLTARECDSLGGVD--GISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTV 902
FLGGRLA+RR+L + + + A+L D+ GAP LP V ASISHK+ +A+ L+++ +IGVDIE+ R + + RVLT RE D LGG+ GIS E E+LLRFS+KESVYKA++P LRR + F+E EV P G T+
Sbjct: 114 FLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTI 263
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: W7TPT1_9STRA (4-phosphopantetheinyl transferase entd n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT1_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.320e-26 Identity = 75/170 (44.12%), Postives = 105/170 (61.76%), Query Frame = 3
Query: 423 LMPEEVSYCLGLPQA-LQPGFLGGRLAIRRALVGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYH------GHIGVDIELPAVRRRVD-LRRRVLTARECDSLGGVD--GISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTV 902
L P+E+ + + + FLGGRLA+RR+L + + + A+L D+ GAP LP V ASISHK+ +A+ L+++ +IGVDIE+ R + + RVLT RE D LGG+ GIS E E+LLRFS+KESVYKA++P LRR + F+E EV P G T+
Sbjct: 178 LHPKELDLAMNMSNLDSRLAFLGGRLALRRSLRKLPQPIRIEQAVLRDEKGAPALPSHVQASISHKQDLAICLLRSVEEDPNRALSNIGVDIEICQPRPSTNSIATRVLTRREQDELGGLASLGISGESELLLRFSLKESVYKAIYPFLRRYVAFQEAEVTPHVDGTSTI 347
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A7S2A1R9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1R9_TRICV) HSP 1 Score: 115 bits (287), Expect = 3.900e-25 Identity = 91/234 (38.89%), Postives = 114/234 (48.72%), Query Frame = 3
Query: 345 LPVGRCVGITLPSVLTTEALRIAS--------EELMPEEVSYCLGLPQAL---QPGFLGGRLAIRRALVGMEE--------------APSVPSA-------------ILHDQDGAPVLPHDVAASISHKRHMAVALVQT------GYHGH----IGVDIELPAVRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTV 902
LP GRCVG+ LP ++ + E L PEEV + GL Q + F GRLAIR AL + + A SVPS IL D G P +P SISHKR VALV G G +GVDIE RR+ + R+VLT E D LG ++G++ EVLLRFS+KESVYKA+HPLL + +GF+E E+ P G V
Sbjct: 27 LPEGRCVGLRLPPSSSSSPSAESDGTKEHWIREYLPPEEVGF--GLDQGCAGTRDSFFAGRLAIRAALGSLAKQQQEEEQGTAEGSSASSVPSVPRIGPSSSSSFPPILRDGHGRPTVPDGFLGSISHKRVTGVALVSRDDDNKGGKRGRPRRGVGVDIEQTR-SRRMSIERKVLTKGELDDLGKLEGVTRSEEVLLRFSLKESVYKALHPLLTQYIGFQEAEIVPLPDGTARV 257
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A7V4FZ99_9DELT (Enterobactin synthase component D n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4FZ99_9DELT) HSP 1 Score: 113 bits (282), Expect = 6.020e-25 Identity = 80/216 (37.04%), Postives = 114/216 (52.78%), Query Frame = 3
Query: 354 GRCVGITLPSVLTTEALRIASEELMPEEVSYCLGLPQALQPGFLGGRLAIRRAL--VGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTGYHGH-IGVDIE----LPA------VRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKTGGDCTVHTSEAGAWGDLKLSAGWIHL 962
GRCVG+ +P+ + L + L PEE + L A +P ++ GR+A+R+A +G+E P IL ++ GAP LP D+A SISHK+ +AV L + +GVD+E LPA + R D+R RVLT E L V + +VLL FS+KE++YKA+HPL+ R +GF E V P G V S + G W +
Sbjct: 15 GRCVGVCIPTEVDDRLLDV----LFPEERTLVSALAPARRPSWVAGRIALRQAFRDLGLEPGP-----ILMNRHGAPDLPPDLAGSISHKKTLAVGLAARAENRTCLGVDLEDIPPLPASVEEARAQARPDIRARVLTKDELAQLERVPEQARRRQVLLHFSLKEALYKALHPLVIRHVGFHEASVTPLPDGGVRVTLSLSEDQGTFDAECTWTEI 221
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Match: A0A7Y5NQZ5_9DELT (Enterobactin synthase component D n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NQZ5_9DELT) HSP 1 Score: 110 bits (276), Expect = 3.580e-24 Identity = 84/218 (38.53%), Postives = 115/218 (52.75%), Query Frame = 3
Query: 372 TLPSVLTTEALRIASEELMPEEVSYCLGLPQALQPGFLGGRLAIRRALVGMEEAPSVPSAILHDQDGAPVLPHDVAASISHKRHMAVALVQTGY---HGHIGVDIELPAVRRRVDLRRRVLTARECDSLGGVDGISEEVEVLLRFSMKESVYKAVHPLLRRPLGFKEVEVYPKT---GGDCTVHTSEAGAWGDLKLSAGWIHLPDVLGQPLILTYCKA 1007
T+ SV +AL EEL PEE ++ GL A + +LGGR+A+RRAL + + AIL D GAP LP V SISHK +A+AL T H +GVD+E R VD+ +RVLT E SL + V + F++KE+VYKA+ P RR +GF+EVE+ + G+ + T A G L + W D G+ LI+ A
Sbjct: 7 TIVSVSLADAL--GDEELHPEERAFLRGLEGARRATWLGGRIALRRALAAVGVSCD---AILADDRGAPHLPARVRGSISHKETIALALATTALDDDHVGVGVDVEYDRPLR-VDIAKRVLTTAELASLERFAEGERDHVVRVAFALKEAVYKAIDPACRRYVGFREVELDFRVITEPGEIPISTQLAPDPGPLAVRCAWSAATDASGEALIVATATA 218 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1259.1932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1259.1932.1 >prot_F-serratus_M_contig1259.1932.1 ID=prot_F-serratus_M_contig1259.1932.1|Name=mRNA_F-serratus_M_contig1259.1932.1|organism=Fucus serratus male|type=polypeptide|length=324bp MHLCFRHVRHVCSLNGSVNFLEFQIRTCSVSSSHPQTCSTASLHDSRSFRback to top mRNA from alignment at F-serratus_M_contig1259:86741..97637- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1259.1932.1 ID=mRNA_F-serratus_M_contig1259.1932.1|Name=mRNA_F-serratus_M_contig1259.1932.1|organism=Fucus serratus male|type=mRNA|length=10897bp|location=Sequence derived from alignment at F-serratus_M_contig1259:86741..97637- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1259:86741..97637- >mRNA_F-serratus_M_contig1259.1932.1 ID=mRNA_F-serratus_M_contig1259.1932.1|Name=mRNA_F-serratus_M_contig1259.1932.1|organism=Fucus serratus male|type=CDS|length=1944bp|location=Sequence derived from alignment at F-serratus_M_contig1259:86741..97637- (Fucus serratus male)back to top |