mRNA_F-serratus_M_contig1259.1928.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1259.1928.1 vs. uniprot
Match: D7FQQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ0_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 4.970e-133 Identity = 193/340 (56.76%), Postives = 238/340 (70.00%), Query Frame = 3
Query: 90 KRRGLEHFQQFPQENGAIFLFNAYTGEAIYDVDRWGSPLPGARRFSHWFEPTDMAPACSDLCSSGPISITNQRRFLDGSPGNDYRMRWHAAEIIQSNLRSALARWRVARALCCAWTKHYDHTADRYAFTHSSTGATQYHKPWGMGTADLWASPGDKVDQTLLSLFVTVESTTNSRREDDKGEDVRRWEGSRRQRQGLYRFYREGNFRQGPYCRICGPGRTKEISLTNVFLYPKKYFKVRPFAHPSDMQFQGTGMGNIVSCMDGLVEKT-------------------------ITVDPYFHVRNASEHGAMKVLEVMNKYGNNLRVQGVGLQRMAGSLLE 1034
+R ++F +FPQENG+IFLFN YTGEAIYDVDRWGSPLPGAR SHWF PT + P ++ P+ N R D PG++YR RWH AE+IQ N+R+AL+RWRVARALC W K YDH A+R++FTH + QYHKPWGMGT DLWA PG+KVD+ L+SLF+ VES T R D++ D WE S+R R+ LY+FY+E F +GP+CRI GPG KE S TNVFLYPKKY+K +PF+HP D Q +G MG+ V+CMDGLVEK I+ D YFHVRNASEHGA+ V+++M K+ ++LRVQGVGLQRMAGSLLE
Sbjct: 7 QRATQDYFDRFPQENGSIFLFNTYTGEAIYDVDRWGSPLPGARTLSHWFVPTAVVPPATE---GEPVDTHNLRDLRDDFPGSEYRARWHCAELIQRNVRAALSRWRVARALCAVWVKDYDHEAERFSFTHQNNREMQYHKPWGMGTVDLWAVPGEKVDEHLVSLFLRVESATAEERTDEEPRD---WEASKRHRRRLYKFYQEKKFSEGPHCRIVGPGSLKESSFTNVFLYPKKYYKTKPFSHPRDRQCEGARMGSQVTCMDGLVEKRTTSTENRNRKDASHGQAPYGEKGQLISADAYFHVRNASEHGALNVIKLMFKHRDDLRVQGVGLQRMAGSLLE 340 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1259.1928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1259.1928.1 >prot_F-serratus_M_contig1259.1928.1 ID=prot_F-serratus_M_contig1259.1928.1|Name=mRNA_F-serratus_M_contig1259.1928.1|organism=Fucus serratus male|type=polypeptide|length=545bp MPSRGCSSGSPSRTNAWKRRGLEHFQQFPQENGAIFLFNAYTGEAIYDVDback to top mRNA from alignment at F-serratus_M_contig1259:24153..29775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1259.1928.1 ID=mRNA_F-serratus_M_contig1259.1928.1|Name=mRNA_F-serratus_M_contig1259.1928.1|organism=Fucus serratus male|type=mRNA|length=5623bp|location=Sequence derived from alignment at F-serratus_M_contig1259:24153..29775- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1259:24153..29775- >mRNA_F-serratus_M_contig1259.1928.1 ID=mRNA_F-serratus_M_contig1259.1928.1|Name=mRNA_F-serratus_M_contig1259.1928.1|organism=Fucus serratus male|type=CDS|length=3270bp|location=Sequence derived from alignment at F-serratus_M_contig1259:24153..29775- (Fucus serratus male)back to top |