mRNA_F-serratus_M_contig1257.1920.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1257.1920.1
Unique NamemRNA_F-serratus_M_contig1257.1920.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1257.1920.1 vs. uniprot
Match: D7FKA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKA4_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 2.320e-55
Identity = 107/226 (47.35%), Postives = 145/226 (64.16%), Query Frame = 2 
Query:   74 MTWSEGRSSAA-AGSTGPRKEALDRVDGLLRALARDELLHDDLKQPDVRRAFEHWTGRSRLSQEEADELMEDNYRIGSVCEKMVELQTCCKAAGMGLPLARVLAGKGLYDS-----EGSDLETSGTSYNPMGESSSADVAHPRSLDTSNERRGGERPAEPKPEPVAASQPSACHGTEPPTWKQALVGEFWRALLACACAVVFSLALKFFRGENALGGAGPHEGGLP 733
            M+W+EGR +A  AG+TG R+EALDRVDG+LRALARD+LL DDL+  DV+RA EHWTG++R+SQ+ ADELMEDNYRI SVC +M ELQ+ CK A +GLPL+ VLAGKGLYD+     + S   TSG+  N + ++         S      R+G    A+   +  A ++       + P+W++AL  E  R    C CA+VF+L LK +RG++ LG   P +   P
Sbjct:    1 MSWAEGREAAMPAGATGSRQEALDRVDGMLRALARDKLLQDDLRNTDVKRALEHWTGQNRMSQDHADELMEDNYRIQSVCSRMAELQSLCKQASIGLPLSHVLAGKGLYDNLDQPGQASAAATSGSGGNAVDQTGRPTSTSDGSSSGLQRRKGAT--AKGLHDATAGAEVGTGKEEDEPSWRRALAEEALRLTFVCLCALVFTLLLKHYRGDDPLGKGLPGQQQTP 224
[Close]
BLAST of mRNA_F-serratus_M_contig1257.1920.1 vs. uniprot
Match: A0A2R5G976_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G976_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.150e-14
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 2 
Query:  137 LDRVDGLLRALARDELLHDDLKQPDVRRAFEHWTGRSRLSQEEADELMEDNYRIGSVCEKMVELQTCCKAAGMGLPLARVLAG 385
            ++RV G+L AL +D+ L +DL+  DV  A +HWTGR+RLS EEA    E+N R+  V  K+  LQ   +AAG+G+P+  +LAG
Sbjct:    1 MERVKGVLEALQKDKNLQEDLRDKDVLAAIDHWTGRNRLSTEEASRRFEENGRVRQVMSKLQRLQAESQAAGIGVPIMALLAG 83
[Close]
BLAST of mRNA_F-serratus_M_contig1257.1920.1 vs. uniprot
Match: A0A8J2X2A2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2A2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.650e-11
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 2 
Query:   80 WSEGRSSAAAGSTGPRKEALDRVDGLLRALARDELLHDDLKQPDVRRAFEHWTGRSRLSQEEADELMEDNY----RIGSVCEKMVELQTCCKAAGMGLPLARVLAGK 388
            WS+GR          R E +  VDG+L  LA D     DLK+P V++A  HWT R+RL   EA EL  D      R+ SV  K+  L   CKAAGM +P+ RVLAG+
Sbjct:   82 WSDGRRRDEKDPAKLR-ERVAAVDGVLGQLADDADFQSDLKRPTVQKAINHWTNRARLKGPEAQELFGDASPEAPRLRSVLAKISRLSAACKAAGMPVPIDRVLAGR 187
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1257.1920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKA4_ECTSI2.320e-5547.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5G976_9STRA2.150e-1446.99Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A8J2X2A2_9STRA1.650e-1143.93Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1257contigF-serratus_M_contig1257:140022..155635 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-17_003360.1
Exons4
Model size997
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1257.1920.1prot_F-serratus_M_contig1257.1920.1Fucus serratus malepolypeptideF-serratus_M_contig1257 140268..155562 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929181.393127-UTR-F-serratus_M_contig1257:140021..1402671622929181.393127-UTR-F-serratus_M_contig1257:140021..140267Fucus serratus maleUTRF-serratus_M_contig1257 140022..140267 -
1690962740.1287494-UTR-F-serratus_M_contig1257:140021..1402671690962740.1287494-UTR-F-serratus_M_contig1257:140021..140267Fucus serratus maleUTRF-serratus_M_contig1257 140022..140267 -
1622929181.4722128-UTR-F-serratus_M_contig1257:155562..1556351622929181.4722128-UTR-F-serratus_M_contig1257:155562..155635Fucus serratus maleUTRF-serratus_M_contig1257 155563..155635 -
1690962740.1909165-UTR-F-serratus_M_contig1257:155562..1556351690962740.1909165-UTR-F-serratus_M_contig1257:155562..155635Fucus serratus maleUTRF-serratus_M_contig1257 155563..155635 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929181.4127634-CDS-F-serratus_M_contig1257:140267..1407241622929181.4127634-CDS-F-serratus_M_contig1257:140267..140724Fucus serratus maleCDSF-serratus_M_contig1257 140268..140724 -
1690962740.1393394-CDS-F-serratus_M_contig1257:140267..1407241690962740.1393394-CDS-F-serratus_M_contig1257:140267..140724Fucus serratus maleCDSF-serratus_M_contig1257 140268..140724 -
1622929181.4293175-CDS-F-serratus_M_contig1257:141106..1412191622929181.4293175-CDS-F-serratus_M_contig1257:141106..141219Fucus serratus maleCDSF-serratus_M_contig1257 141107..141219 -
1690962740.1550624-CDS-F-serratus_M_contig1257:141106..1412191690962740.1550624-CDS-F-serratus_M_contig1257:141106..141219Fucus serratus maleCDSF-serratus_M_contig1257 141107..141219 -
1622929181.4429905-CDS-F-serratus_M_contig1257:145662..1457331622929181.4429905-CDS-F-serratus_M_contig1257:145662..145733Fucus serratus maleCDSF-serratus_M_contig1257 145663..145733 -
1690962740.1689138-CDS-F-serratus_M_contig1257:145662..1457331690962740.1689138-CDS-F-serratus_M_contig1257:145662..145733Fucus serratus maleCDSF-serratus_M_contig1257 145663..145733 -
1622929181.458307-CDS-F-serratus_M_contig1257:155525..1555621622929181.458307-CDS-F-serratus_M_contig1257:155525..155562Fucus serratus maleCDSF-serratus_M_contig1257 155526..155562 -
1690962740.1784306-CDS-F-serratus_M_contig1257:155525..1555621690962740.1784306-CDS-F-serratus_M_contig1257:155525..155562Fucus serratus maleCDSF-serratus_M_contig1257 155526..155562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1257.1920.1

>prot_F-serratus_M_contig1257.1920.1 ID=prot_F-serratus_M_contig1257.1920.1|Name=mRNA_F-serratus_M_contig1257.1920.1|organism=Fucus serratus male|type=polypeptide|length=226bp
MTWSEGRSSAAAGSTGPRKEALDRVDGLLRALARDELLHDDLKQPDVRRA
FEHWTGRSRLSQEEADELMEDNYRIGSVCEKMVELQTCCKAAGMGLPLAR
VLAGKGLYDSEGSDLETSGTSYNPMGESSSADVAHPRSLDTSNERRGGER
PAEPKPEPVAASQPSACHGTEPPTWKQALVGEFWRALLACACAVVFSLAL
KFFRGENALGGAGPHEGGLPDHEEF*
back to top

mRNA from alignment at F-serratus_M_contig1257:140022..155635-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1257.1920.1 ID=mRNA_F-serratus_M_contig1257.1920.1|Name=mRNA_F-serratus_M_contig1257.1920.1|organism=Fucus serratus male|type=mRNA|length=15614bp|location=Sequence derived from alignment at F-serratus_M_contig1257:140022..155635- (Fucus serratus male)
GCTGTAAGCACGTTGTTAGCGGGTACCACAAATCTGACTTCAAGGATCAA
TCCAGTAAACGCGGTGGAGGAAGATGACTTGGTCTGAGGGACGTTCGTCG
GCAGCCGCAGGTGATATCTCCACCAAACACACATGTTTATTGCTGACGAC
ACTTACAAGAACCCGCTCGATATTCGATTCTATTTACGAGTATATCTTCC
GCGGGGACGCTGAGTCCTGTACGCTCACCCTGATTCCAGGCCCAACATGG
CTTTTGAGTGGCATTTGGAGGCACGAACTTGAAGCATATATAGGCAACTG
TTTTGCTCGTATTCGACATCCTCACCAAATACAAAGATCCTGCTGTGCTG
TGTTATTCTCGTTATTGAGTTTACTGATATGCTATCAACCTCGTCATAGA
TTCCCACGTTAGTGAAGTAAAAGAAACACACACATATCTACATATTTATA
GAGGCTCGTTTTTCACCACAGTCAAGAGTAAAATACCGGTAAACTACAGA
CAGTAGTAGTGGATGTATGTCCATTACACATATAGCAAGAGTATGGATCA
ACCTGGTAAAGTTGCCAACCCTGCTCGTGGTCAGCTGAACAGGGAAAATG
AGCATTTCCCTGTCCCCGTTCGCGCCTGAAATTTGGTTTCGCGAGACGGG
TTCGGCAGTCCTGTCCCGCGTCAGCCTGCTCGTCTCTATACAGAATATGT
TCTTCGCGTGGTCAGAGTCGACGTTGCCATGAAATACCTGGCATGTCCTG
ATGGTTTTGAGTACTGTACCATTCTGGGCGGTCTTTGAGCATTCCAATCA
GGAGCAACATGTTTTCATTTCCTTGACTCGATTACAGTGTGGGTGTCCCT
GCATGGCGATCAATCTAAGTGTACATACAGTATAACGGTGGGCCTCTCCA
CGATAATGTTACTACCATCTGGGAACCCGTTTAGATGCCATTACGAGTAA
GAGGCTTTGTCTTTGCAGCCTATGGTGATACCACCTAAACGTTTTGACAT
TTTTCCCCTTAACTGGGGGATGCTCAGAATGATCAGGGGCACGCGTGGTA
ATGTGATGGGATGGTATTACCGTCACAAATGGGACGGTAATGGTATGGGA
TGGGATGGGTCGAGGAATTTCGTTCCCATCACAAGCTACCATCCCATCAC
CATCACTGTGATTTGTACAACCCATCAATTGCCAGTTGGTGGTATGTCCG
CATATACCATCCCATCGACTTTCCCATCCCACCACCCGGAGTTGCTTCCC
ATCCCATCTACAACCCACCTCTCGAACTTTCAACCATCCCACCACATACC
CACGTTCAGCCACCCCGATACCACCGCCCAGCAATCATTTTCCTGGATAT
TTCCAGGAAGGCAGGCCCCCTACCCCCCATAGCGTTTGCACTTTCTGCTT
ACTACTCGTACATACTCCATATATGTACACAAACAGTAGTAGTAGAACAA
AAAAAGAGCGGAACCCAGGGGTATTTTATTGTGAGCAGTTCTGCTTGTCA
ACACGCACACGCATGATGTCCGCTCCCCAAGGCGGCACGCCGGCCGCCAG
TAGTCAACCAGCCACCTGCAGCACCCCCAACGCCATCACCAGATGGCACC
ATTGGCGAGAGCTCTGCAGGAACACAGCAATCTGCAGCGCTCTCTGCTGC
GCCTGCTGCTCCCGTCGGACAAAACTCTTAGTCTATATATATACTGATGT
TGTATCATATCATACAGCAGTAAGGGGCGTTTTAAACATGCTTTTTTTTT
GTCTCTTTTTGCGACAAATCACAATGTGATACAAACGTAGTGAGGCATTT
GTCGTAGTTTTAAAAAAAAACTGTGATCTGATCTGACGGCCAAAAACGTG
AACGACTTGGATCACACATTAGGAAATTTGTCGTGCTTTTTTTTGTGAAT
TCGGACAGTGGCAAGCAAAGGGCTCGGTAGTGCCAAGTTAGCAAGCGGGA
ACAATCCCCACCACCACAGATCACTTGGGTGTGTAGAGGGTGCCATGGCC
GACGGCAGAAAGCGCCATCAACCTCTGGGTTCGATGCCAACTGCTCGACA
ACGTAGGAAACGACAGTGCACAGCGCCGGAAATACTGACCGTTGTCGCCA
TCCTATTGAGCGTCGTGGCAACCACCGCTGCTGTCATTCAATACTCTACC
CCAAGACTCGACAGCGTATTCATGAGCCGCGGCGCCTGGTATGGGAGGAG
CACAGGGTAGACCTGGCCAGGCGTGGTATGTTTCGGAGGATGTATCGCAT
GGAGGAACATACATTCAACAAGCTAGCTGAGCTTCCACAATTATATTCAA
GTCAGTGCGTGGTAAAATATACTCAATACAAGGGTGTTGAAATTCGAGCT
TCTTGTACGGTATCAAATACAACAGTATAGCTAATTCGCAGTACTGTTCT
GTAGCGCAACAGTAATTAAAATACTAAATTTTCATCGATTGGTTGAGCGG
GCGAGTGCTAGGTGGTACAGTAAAACCGTATGCATGCACGATTAGATTTT
CCCCCGGACTGGGGGATGCTCCGAAGGTTAGGAGAAGGTTAGGTGCATTC
TGATTTTCTTCAAAGAACAGCAACAATTGCGGTTCCTGTGTTTTTAGTTT
GGCTACTGCTGGGTATGTACGCTTCAAACGAATTTCTTGTCCGCTACCTA
TTATCTCAAAGCAATGCAATGGTTATCGAGAAGCTACAGTGCTTATCACG
AGACGGACAGTGGGCAACGTGGTGCAGAGTATACTCTTCGCTGGTGCAAA
TCGAGATAACCATGTTCAGTCTCATCCTTCTGCTTTACGCGTCGCAAACG
CTTTCATGCTTGATCAAACAGAGATCTCTCGCGTGTTGCTACTACTGTTG
TATACTAGAAGCTCTCTTGTACGGATGCATGACATGGACCCCCCTGAAGT
GCCACCACGCCAAGCTCCGTACAACACACCACAGGATGTTGCTTCGGATT
CTAGGAGCCTGGTGCAAGTCGCCGAACAAGCGCATCCTCTCGTACAAAGA
TGCCCTTCAGCGAACCCAATCCGAGAGTATCGAAACAACCGTACGCACGA
GGAGGTTGTTGTGGGCGGGGGCGCTACTCCGCATGGGTGACCACAGGCTA
CCCAAGAGGGTCATGTCGGGAGAGCTCGAGAACGCGGGGAAACGTGGACC
GGGGGGAAGGAGAAAGAGTGGACGGACTGCGTGGCAGATGATCTTCGGCT
GTTTGGCGTCACGGGGGACTGGAGAACCGCCGCACTTGACCCTGGGGCGT
GGTATAACACGGTACACGAAGGGGGTTGTAGGTTTATGGCCGCGTGGGCG
AGGGAAGAAGAAAATGCGTCCATTCAACGGCAGAAGAAGAGAGAAGCGGA
AGAGGCGGACAAGGTTGAGGTTGCACCTGGGGTGACTGTAGCAAGCTTGA
GACGTTTTCGAACCGCGTTGATTGGACCAACCCAAGGACTCCCTAAGCGA
CGTCGATTGTGCCGTTAGTGAAAACTGAAACCCTAAGAGTACGGAATGCG
GTAGATGCTACGCGTTTGGGTGCATGGTTGCGATCCGGGAGGGTATAGGA
TGACTCGCGGCTGACTCTATGCCAAACTCTCTCTCTCGAATGCCATCTTT
TCTGGCATGTATATTTTGTTATCCTTGTTCCTTTCTCTTTGTCGTTTTTG
TGTGTGTTTGATAGATGTTCCTCTGACCTCTTTCTGTCCAGCAGACCACG
TACCGGATTGGCAACCACGTAAATTACAAATTACTGGGTATGGTTGAGGC
CCGATCGGTTAATGTGAAGAAAACAACAACAACAACTGCTGTATGGCGTA
CGGGCATGTGTGTACAGACGGAGCAACAAATCTCAAACAATATGTCTTAA
AAGTGTGACAAATATGACACGCACGTCTAAGATGATTAAAATGGTCCGAA
GACGTGTCTCTTTTTGTGACACTTATTGTGTCACAAAAAGAGACAAAAAA
AATCATGTTTAAAACGCCCCTAATTAAGTAGTACATGATTTTTCCTTTTT
CCCGTTTTTTTTCCAGATTTCATTTTTCATTTTTCAGTGACCTGGTACAG
CAGTAGTACTAGAGCAGCTGAACTCAGCAGTCACAACGGGACAAAAAGGT
CACCCGTCCTCCCGGCGACGTGGATGCCCCGGAGAGTCGAGCTGACGTCG
CAGAGCGCGAGTTTAACGCGTACATGAAAAAGGCGGCCCCCTCCAACAAC
TCCGACTTCGATTTGCTTCAGTACTGGGCTACGTGGAGTGTAGATGGGAT
AGACCCGTCAGGGAAGGTTGTAGTGCCTGCCCGCTGGCCGCACATCGGGT
TGCTATTAAGGCTGTAGTCTAGTGAAAAAATCCCCGGACCCCCGCTTTTC
AACCATTCAACAAACTTGTTTCAAATTTATTATAAAAACAATTTCATGCG
GTACAATGTCTGTACCAATTGGGAGCCACCATATGCCCACAAACATGCTG
GCTCGCGGCGCGCGCGTACACAGCTGGGGAGGGTGCTTGCTCAAATCAAC
AGCCCGGGGCCCCTGAAGGTGCGTGCGTGTGAAGGTACATCAGAGGGCTC
GTCGGCTGAAGTTTTTATGCTTGAACATGCCCTGTGTCGCTCAAATTCGT
CGTCGGAAAAATCAGCCCTTGCGGCTGAACCTCAAATTGGAGGGAATCCT
GCACTCAACCTGTAGAGCGCCTTTTGAAGCTATGCGGCGTGGAGATAGTG
CATTGTGAAGGCAGAATATTGAACCTAGTACAATACTCTGGGGATTCAAG
TTCCTATCTCCTTCGCGGGTGTGGCATGGCCGGATAAAAATTGACCTTTG
TGATCACAAAACTCACCAAAATTCGCTACTGTTACCTGTAGACAAAAAAA
CTCCCAATTGCTCCGCATCCTGTACGGGTTCCCCAAAAACAGCATTCACC
TGCGCCACATGTCCCCTGGACCACCACAGCAGTGGTATATCGAACCCTTG
AGGTGTTGTCGTTGTGCCTGAAGAACAACGAGCTTCAAAAATGCTGTACA
GCAGGCACGATCGACATTTTTGTCAAAATAACGTCTTATGCCACAGTTGG
TCCATCCGGGACCCGAACTGGTCATCTTTGACGCGCCTAACAGGGGCAAT
CCTCTCGCTAACGACTCTTACGCCCTGAATAAGAAAGATACCTTACATCC
GGCTCGACCTATTTATGGTATGGCAATGCGTTATCTCCAGCTCGCCGGGC
TTGAATTTTGCGATACCGCATATGTAAAATATCAGTTTTTCCAGCTTTAA
ATATACCTGTTGTTTGTTTGGAGTCACAGGTACTTGTAACTACAATACTA
TTAATAGAACATGTGTATAGTTGAAGGTGTTTTTACCCTCGCCGTACGAC
TTGTCTGCTGTTTGTATACATATTATATATCATATGACCTCAAATTGTAG
GTACAGACAGCGATAATACACAGCAGCTGCATCGCCGCGTCGCGTGCATA
TTGTCTGCCGCCTGGACAAATTGTACGCACGTGCGTTAGAAACCGCTCTT
GGCTGTCCGTATGGCTGTGCCAGTCTTGTGTTTTTCATGTTCCCTTCTCG
TCGGTATTGATAGGTACAAAGAGGTTAGATTGTCCGGGATTGAAATTTGA
AAGAAATTTGCAATGCAGTGTATACTAGTATAACTTACACGTTTTTTCTA
CAACTACTTCAGGTTGCTTCAGTAGTACCGGTACAGCAGTGGCTACGTTT
TGACACACAACATATTTTCTCGTCTATATATTAGACTGTAAACATTTTTG
TACAGGAACAAGGTTCCAAAGTTCCACGGCAGTACATCATCGGTAATTAT
GTTTTGAAACACAACATATTTTGTACTGTGTAACCCGGGACCATGAGTAA
AACGGAGTATTTATTATGTTTTGAGAAACAACAGATTTTCTACGGTGAGC
CTATTTACCGGGGCACCTTCGGGTTTTTATAGAAAAACTAGAACGCGCCT
AGACCTTCTGAGCTTCTCGCAGTCAGGGGGGAAATGTCAAAACGTTCAGG
TGGGAACATAGGCTTTTTGTTGCGGGCACGCTTCGGGGATCTCTCTTCTC
CTACCGCGATGGTTCGCTGTGGATGCACCTTACGCGAGTCCGTGCTCTGT
ACCCGGGCACTCCTACTGCTGCACACTATTTTATACCAGTACCAGGTACA
TGTTAGACAGCTGAGCGGCTGAGAAAGGAGCAAGATGGCCGCGTGTGCTG
TACAAAGCGGTTAGATTGTCATTGAAATTTGCAACGCAGTGTATACTAGT
ATAACTTACACGTTTTTTCTACAATTACTTCAGGTTGCTCCAGTAGTACC
GGTACAGCAGTGGCTATGTTTTGACGCACAACATATTTTCTCGTCTGTAG
TCTGTAAACATTTTTGTAACAAGGTTCCACGGCAGTACATCATCGGTAAT
TATGTTTTGGAACACAACATGTTTTTGAAGAAAATACAGAACGCACCTAG
ACCTTCTGAGCATCATTGTGTAACCCGGGACAATGAGTAAAACGGAGTAT
TTATTATGTTTTGAGAAACAACAGATTACGGTGAGCCTATTTACCAGGGG
CACCTTCGGATTTTTATAGAAAGACTAGACCGCGCCTAGACCTTCTGGGC
ATCCCGCAGTCAGGGGGGAAAAAATGTCAAAACGTTCAGGTGGGAACATA
GGCTTTTTGTTGCGGGCACGCTTCGGGGATCTCTCTTCTCCTTCCGCGAT
GGTTCGCTGTGTGTGCACCTTACGCGAGTCCGTGCTCTGTTCCCGGGCAC
TCCTACTGCTGCACACTATTTTATACCAGGTAAATATTTGCAGCAATCCT
CGCGAGATTTATTTTTATTCGCGTGTTTAAAGGGATGTTTTGTCTGAGTT
CGTCGTCCAGGAACAAAAAAAAACGAACGGTAACCAGCAAAAAACACGCC
TCGAGGCGAGCAAACCTCCTACCGTCTAGACTACAGCCTTAATAGCTAGG
TTGTACGCAGGTGTCGACACCACTAGCTGTCAAGCTGAGAGGAATTTTTC
CACTCTCAAACACGTCGTTAGTGACATGCGAGCCGGCACCCTTCCCCACA
AGGTCGAGAAGATGTTGCTGCTGAGGCTCAATAGGCACCTCATTCCTGGT
TTTGCTGAAGTCGTGAAGCAACTGGAAGCCTTGAAGGCGATGTGCGATGT
ACACGCGGCTGTATCAGTTGCCGCCCAGAACGCTCGCGAGGGTGATTTTG
TGCACGTGGCCTAGTCAGTTTGCGTCAGTTTGCATTCTTGTGTCGTGATT
TTGATTCTTTTTCCATGTTTACTGTTCTTCATAAATCGAGGGAATGAAAA
AAAGCAGAAAAGGGTCTAACTCGTAGCTTTCGTTGTTTGAAGTCAATCAA
GTTCGTGAATCTAGGATGCACGGATGGATGCTGCGAGTGCAAGCAACACC
ATCGACAGGCATTTTAACACGGGCACTTTTATTTACAGTATCAGCTGATT
TGTATTAATGATACCAAAAACGCATCATAAACAGTATGATTCTACACACA
CGAGAGGCGTTTGATTGTGGCATGTGACATAGGCGTGACACTACTACCGA
TGGCAAGTGGAACGGTCACTGCTTTATCATGGAGTGATGATGATCCCATC
GCATTCCCATCGCTCTACTATCGCTTTACCATCGCTTTACCATCCTTCCC
CCGAATACCATCACCATCGTGATGGCAAATGGGCTTACCATCCCATCAGC
TCCAGAATCCAATTACCATCCCATCCCATCAACAACGAATCCAACTACCA
TCCCATCCCATCAACACCGAATCCAACTACCATCCCATCCCATCAGCACC
CGACTCCCATTACCATCCCATCCCATCTACACCCGACGCCGATTACCATC
CCATCCCATCGATGCATTTCGTCATGTTTCCCATCCCATCGCATTACCAT
CATCAAAGAAAGTGATTCCCATCCCATCTTTGTGATGGTAAAGCTCAGAA
AAATTTCCGCCTGCGGCGGGCTTTTGATGGAATACCATCCCACGTGGTAC
CTTCGTTACCACGCGTGCCCTTGAGAATGATGAAGGTCTACATGCGTTCA
GATTTTTCTTTAAACGCTTTTTATTTCGGCAATGCGGAAGCCTACGAAGG
AGATTCCGAGGACAAAATCGTTGCGCCACCGCCGGCCGATCTCACCCAAC
TCCAAGAACCCTCGAGATATTTAAGCTCGCTTTGGCGCCTAAGCCCTCAA
CGACAACGACAGAGCCCCAAACCCTTGACGCCTCAGGCCTTAACTTAGAT
GTCGCATTCTACTTCCTCTGAAAATAACTCTTTACCACAGATGCTCGTCG
AATCAGAAGTTCTGGTACACAGCAGTCAGGCCAGAAAAAGCGCCGAATTA
GCTTGTAACGCAACATGCGTTCTAGCAAAATCGAGACAATATATATATGG
TATATATATATATATGTATATTTATCGTCTCACTTCTAGCCGATGGACCT
CTAATAACCATCCTGCCTGTGGTCACAAAGGATCTTACCATCTCTCCCCG
GTTCGCGCCTTACATTTTTTATCGCGATGCAAGTTCAGCACTCTTACAAC
TCGTCAACCAATGGTTGAATTTTACTTACCCACGCTTTCCGTTACGAAAG
AAAGAACACAAATTCTGCTTAAGCTAAGAATCGAACTCACGACTTCCGCA
CTAGCAGGTATGCAGGTTACCTACTACCAGGTATTCAATAGACCACTCGG
GCGACGAATGATACAGGTTATTAATAGTAGACTCTGGCGTCGAGCTCATA
TGGGCCCGCATTTCTTTCGTGTTCATATTTTCCCAGGTACAGATATAAGA
GCCTGGGTGTGGGTGTGGTCTTGATTTGTATTAACCGATCGGGCCTCGAC
CCCATACCCAATGTTACAGTCTACGTGGTCTACTGTAGAGGAAAAGATCG
GAGGAAATATCTACAAACCCTCGTCGCCCGCGAGTGGTCTAGTAGGTAAC
CTGCACACCTGCTAGTGCGGAGGTCGTGAGTTCGATTCTTGGCTAAATCA
GGATTTTAATTCTTGCTTCCATAGCGGAAAGCGTGAGAACGTGAGTAGGT
AAAATTCAACCATTGGTTGACGAGCTGTAAGAGTGCTGATCTTGCATCGC
GATAATAAAAAATTGTAAGGCGTGGACCGGGGAGAGATGGGAAGATCCTT
AGTGACCACAGGCAGGATGGAATGAGGCCCATCGGCTACAAGTGAATGAA
AAAAAAAAAAGTACTACTTTCATCATGCCCACACGCCTAAGAATTTGGTC
TCGCGAGACGGCTTCGGCCGTCCGGTCCCGCGTCAGCCTGCTCATCTCCA
TACTAAGGCTAAATCTGCTTTTGATTTTCCATCTGGCGATGAAATAAACT
CGGTGCGTTGTTGGGCTCTGTATCTGTACGAAATACATTTCGGGGGAGAT
TTTCAAGGCATACCAAATCTGGAATATCAAGTAGGTGGCCTATCAAGCCT
TGGGCGCATCAAGGCCCTTCATTTTACAAGTAATAATGCATACCAGAATT
TTTCAGGCCGTTTTTGCGGCTGGATCTCACCACGGCGCGGTTCATCGGGG
AAACTTTCATCCACTCCTTTTAGGCGCAATCATCGGAGGAGCTTTCATCC
ACGATGGCCTGCGCAGCCAAATCGTCGGTCTGTTTATGGCTACCTGCACG
GAACCTACGGCGTACCGAGTCCGCTGCTCAGCAATGAGTAAAAAGCGCAT
CTCCAGGGCCCACGTATTTCGCTTGCGATGTAGCTCACGCGAGCGGTATT
CATACACACCCGAGTATTATTATATATGATGTAATACATTCAAGACTGTT
TTGGCGTTTATGAATTAAACGAAACGAGCGAGATACGGGAGTCGTGAAGC
CTAACGGTCCGCAGGCCTACGCGCTTGCCCCCGTGACATCTTCTCCACAC
AGGCAGTACTGGTCCCCGTAAAGAAGCGCTGGATAGAGTCGACGGCCTGC
TTCGGGCGCTGGCGCGAGACGAGGTACGTAGAGCCTACTCCGAAACCAAC
GTCACACAACACACAATACAAATAATAATAATGGGCATTTTGATTGGTGT
TTATTCAATTGCTGCCATATCTGTAGTGAGCATGGTCTTAAAGCTACTGG
GAAGAAAAAAAATAGAACACCCGTCTTCCCGATTCGTACATGCCGGTTCC
AAGGTTTCCATGCATTGACAGTAGTGCCGCCCCGAGGGTAGTGTATCCCG
GGGGCGACCGATTGACTCTATCATTGTTCGTGGTGTAAGAGTGAGAGGTT
TGCGATCGCGCGGAGGGTTTACCGCACGGGGGGTGTACAAGCCTCGAAGC
TTCGGCGCTTGGTCTAACAGACGACCCATCATTATATGCTACTCGTAGTG
ATCCTCATAACCAAGGGACTATTAAGGAATCTAAGATATTTATGACGAAA
ACCCGTGTGTGTGTGTGTGTATTTTTAAAATTGCACATAACCGCGCGATC
TGGCCCCTGTCATTCTAGCCATTCTATGCCACTCGCATTGGTCCTCCCAA
GGGATATTAAGGGATCAATGATACTTTTGACGAAAACCCGTGTGTGTGTG
TGTGTGTATTTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATC
CTAGTCATTCTATGCTACTCGCATTGATCCTCCCGAGGGTGTGTGTGTGT
GTGTGTGTATTTATTAAATTGCACATAACCACGCAATCCGGCCCTGCCAT
CCTAGTCATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATG
ATACTTATTACGAAAACCTCTAATCAGACGCGACAAAGGGGACACGCTCT
CTCTACTTGTACAATTTTCACTTAAACTCAGAGTTCCTTGTGCTCCCCCC
CCTGCTTCCTTATTAATCTCTACAATATTTGAGTTGGCAGCTACTGGACC
GACACTTCCTTTTCTACATCTCTTCCTCGTTCCACCAACGTCTCCCCCGT
TTCCCCCTTGACGTCTACAACTATTTAGCGGTTTCTTGCGCTTCTTAGTC
TCTCTTTCGCCATCCCCGACCCTACCCTCGTTCCCGTTCCCTTCGTCCCC
GTTCCCATCTTCGCTACCGACCTTAGGTCCATCCCCGTTCCCATCCGGTG
TTCGCCGATGGGTCTCTACCTCCGTCCCCATCCCCGCCCTGTCCCCGCTG
CCGTCCCCGTTCCCATCCTGCGCTCCTTCGTTCACCCCCACCCCAGTTTC
CACTCTCGCTCCGTCCCCGTCCCCATGACCGTTTGCATCCCCATTCCCAT
CCCCAACCCCGCTACCGTCTCCATTCCCGCCCCCGACTCGAATCTCGCCC
CCAACGCCGATTGCTCCTTCCTGTCCCTCGGTTACCCCCCGGTACGGTGC
GCTTGTACAGACACCGGACCTTGCGAACGGAACTGTCGAGTACTCGCAAG
TGCCACGCCCTGTCTGCAGAAATGGTGACGCGTGCGGAATGAAAGTGCCT
GCTGTAAAACAAAAGAGAATCGCCGCCGAAGGCATGCTACTTCCGTCCCT
TCCGCCAGATGTTGGGACTCGTTGGAGTGTGTCTCCGACCTATGCTGTAC
CCGTCTGATGGCGAGCTCCTTGATGAGGGCATGCAAGTCTGAGCCAACCT
CACCACATGTCGACATAGCGAGAGGAAGGAGGGAGTAGGTAGCGGGGAAC
GAGCCCCGATACTTGTTTTTCTTCCGCTCGACAGCGTCGGCGAGGTGTTT
CCCTACGTGGCGTGCTGCGTTCCCGAGATTGGAGCTGACGCAAGGGTTGA
CGATGGTGATGTCGAGGAGAAGTCCCTTATTCTTGAGTCGAGGGTGGTTG
TTGAAGAGTGCCCCTGCCTCCGTTGTGATGTCCATACGTAGAGGGTTCAG
TCTACTGTTTTCCCCGCTAGCTCTCTCGCGGAAGGGCCATGTGTCTTCGA
CAACAAACTGAACTTTGCTCTCGCGAAGGGATCGAGCGAGTGCCTGGTGG
AGCACCCGATTGTGAGTGAGAGAGCTCCATCCCGTCTTCGTGCAAGATAT
GGCGTGGAGGCGTCTGGTTTCTTGCCGGCAACCATTGCCATGACACATCC
CACCGACAAGTTCCGCCGCGTCATGCGACCCCAGGCTCCTGCCTAAGGTT
TCCCTCCACAGGGGGCCCTCCATCGTGTCTTCTTGCGAACCCCCCAGGCA
CTCCACAAATGCCATGGCGCCCTTCTCCCGCGCTCCCCTGAGCCTTACCA
AAGCTCGTTTCATTGGGACACTTTCCGAGGTTTGGAGATCTTGCAGGAGC
TTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTATTTATTAAATTG
CACATGACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCATTC
GCATTGATCCTCCCGAGGGGGGATCAATGATACTTATTACGAGTGTGTGT
GTGTGTGTATTTATCAAATTGCACATAACCGCGCAATCCGGCCCTGTGTG
TCTATGTGTGTGTGCTTGTGGATATATGTGTGTGCGTGTATGTATATGTG
TATGTATATGTGTGTGTATTTATAAAATTGCACATAACCACGCAATCCGG
CTCTGTCACCTTACTCGTTCTATGCCACTCGCATTGGTCCTCCCAAGGGA
TATTAAGGGACTTTTTACGAAAGGGGACACATTCTCTCTTATTTAAAGTT
ATTATTCAAGTCCTGAGTACCTTGTGCTTCCCTCCCTGCTTCCTTGCAAT
TCTCTACAAAACCCTTTCCACCCTAGTCTCCCCCATTTCCCACATGGCGT
CTACAACTTTTGTGTATGTGTTGGGATTGTACCCTGCTATAAGCAATGAC
CATACATACTTACATACTCTGCTTCAGTAACTAAAAAAAAAGTTATTACC
ATTCCGCTCAAAGCTCTGGAATCATACCCGCAACCCTCAAAATAATGGCG
ACGTTAAGGACCAACAGAATAATGACGATACTCAACAAACGTTCTTGAAG
CAGGGGAGGGACTGTATTACAGATTTACGCCATAGCGCTGGACAAAACCT
GTGTCATGTAGCCCTTGCATCACTTCAAGAGTTGGTGAGTTACGCCTTAC
ACCGGGTCAAGCACACGGAGAGCTGAGCGCAGAGCTAGTGGAGGTAGACG
AGAGACATGGCTTCGAAATCAAGGGAGACGCACCGTAGCCGGCAGTTGAC
TCTAGGGGATCCGCGTTGCGGCGGAGGGCGTCAGTCTTAGTAGAGTATCT
TCTCGACAAGGCCAGAAAGTCATAGCCATGGCTAAGCTCGGAGGCTCGAA
GGCGACGGTCACGTAATGCGAGAAACAGAAGGAGGGAAACGCATACATGA
AAGGATGGAGAAGTGGAAAGCCTGCTTTGTTTTCACATGCCGAGGGGAGG
GGAGGGACGTTTAGTTTAACGACAACAGTGTCTCTTTGTCTCGAAGCTCT
GAGCTAGCTATTAAAAGTTACAACATAAACCGTTGCTTGAAACAGCTACA
TCATCGTTTGATCCCCGTCTACGCTACGTCGCATCCGTTATTACTCGCGT
GGTCATCACCAAATCCACGAATCATGGATGAGATGCGGTGTTTTATTACA
GTCCTCTGCGTAACGGAAGTTTAGAGGGAAATCTGAACGCGTCTAGACCT
TCTGAGCATCCCCCAGTCAGAGGGGAAAATGAATAGCACCCGTCGTAGCA
TGATCATAGAAAACATAATATATATATATATATATATATATATTATATAT
ATCAATATATAAAGTGTATGGTAGCACGGTAGCTCAGCATGTGGGAATAC
GGCGCTCCATGGAGCTGAGGGTAGAAACAAAATGGAAGCGTGATTACTTT
TGTGAAACAACTCGACTCTCCGGGGGTGAACCTCTTTTTGGTGCGATCGC
GGTACAACAGTGGCTGCGTGAGCGAAAAATCGACCAAAAGATTTCTAAGA
AACCTCGTAAAGGTAATTCCTACTAAAAAAATACATGTACTCCAAAAAAG
GTACCATAAAGAGGTACTTCGTAGGAATCCTATTTTATAACCATAGGAGG
GAGGGAGGAGAATCAACGTTTTTTGGGAGCGAATCACATGGAAACCAGGG
TAGTTACATATCTAGGTTCAAGACACGTCCTTTTTGGACCCTCTGGTGTC
TGCGTCCAGACGCATTATTATTGTATAAGCGGTGGTATCGTCACGGACGT
TTTCTCGCGCATTTTTTAGGTGCCTTACCTTTTCCCTCCTTTTGAAGCAC
AAATTTCGATCGCCAGCGCCGATACACCCCGAGGTGCTCAGTTTTTATAA
AGAGTGTTATATGACGGCACTTAAGGTTATGATTATTATTATTATCTACA
GGTGTAGTATAGTGTTGTAGTACGAACTATCGTTATTACGCGACGCACTT
GTGATATCAAACTTAAGTATCCCCACCCCCCCCCCCCCCCCACATACGAA
ATACGCGCACGGGTAGCTCTTGCATGACGACCTGAAGCAACCGGACGTGC
GAAGGGCCTTCGAGCACTGGACCGGTCGGAGTAGACTATCTCAAGAAGAG
GCCGACGAGCTCATGGAAGATAACTACAGGTGGCCGTACTGAAGGAACAG
TGTGCTGTAAGACGCGCGATTGTTGCTTGCTCCACGTTCTGCGGCATTGG
TCATTGGGTCGTGCTTGGCCGGAGAAAATCGGGGGGGGAAAGCGTCGTGT
CCCTGTCCCTGTCCCTCGAGAGCTGTTGCCCTCTTCCTCTGTCGTACCTG
TCTTGCGATCGAGGAATCAGCTGCTGTTAATAGTAAATATAGACAAAAGA
GTCGGGTAAAACAGAACCCGGTATCGCATAGCAAGATAGAGGTCTAGGTG
CGTTCTGTATTTTCTTCAAACCGTATGATGCATTCATCATGAAATCTATA
CTGTCAACAATCGTGTACGCGTGCTCTAACACGAAACCCGCCTTACACAC
GTGCTCTCCAGGATCGGGTCAGTCTGCGAGAAGATGGTGGAGCTGCAGAC
CTGCTGCAAGGCGGCCGGGATGGGCCTGCCGCTGGCGAGGGTGCTCGCGG
GCAAGGGCCTCTACGACAGCGAGGGTAGCGATCTCGAAACTAGTGGGACG
AGCTACAACCCCATGGGAGAGAGCAGTAGTGCCGACGTAGCGCATCCGCG
GAGCCTCGATACGTCGAATGAGCGGCGGGGGGGAGAACGACCGGCGGAAC
CGAAACCGGAACCCGTGGCGGCGAGTCAGCCGTCGGCGTGTCACGGAACG
GAGCCCCCCACGTGGAAGCAGGCGTTGGTTGGGGAGTTTTGGAGAGCGTT
GCTGGCGTGCGCGTGCGCGGTCGTTTTCAGCCTCGCGTTGAAATTCTTCC
GAGGGGAGAACGCGCTTGGTGGTGCGGGTCCGCACGAGGGGGGGCTACCT
GATCACGAAGAATTTTGATTCCCCCCAACAACTACTTCTCTATTGCAATG
TTTTTCTGAAGCACGTCCGTGTTTTCTGTAGCCAACCGCTCGCTGCTGGC
ATGTATCTGGGGGTCATATGATTCCGTGCTACGCGTTCGTTTATGTATAT
TAGAAAATATATACGGCGTTCGTTCCTCTGTAAACTCCGTGGTACGGTCA
TGTGGCGGTTACATTTGATAGTATAAAAACGCACGGCTGGCTCTTCAACT
CCTCATGCACTTAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1257:140022..155635-

>mRNA_F-serratus_M_contig1257.1920.1 ID=mRNA_F-serratus_M_contig1257.1920.1|Name=mRNA_F-serratus_M_contig1257.1920.1|organism=Fucus serratus male|type=CDS|length=1356bp|location=Sequence derived from alignment at F-serratus_M_contig1257:140022..155635- (Fucus serratus male)
ATGACTTGGTCTGAGGGACGTTCGTCGGCAGCCGCAGATGACTTGGTCTG
AGGGACGTTCGTCGGCAGCCGCAGGCAGTACTGGTCCCCGTAAAGAAGCG
CTGGATAGAGTCGACGGCCTGCTTCGGGCGCTGGCGCGAGACGAGGCAGT
ACTGGTCCCCGTAAAGAAGCGCTGGATAGAGTCGACGGCCTGCTTCGGGC
GCTGGCGCGAGACGAGCTCTTGCATGACGACCTGAAGCAACCGGACGTGC
GAAGGGCCTTCGAGCACTGGACCGGTCGGAGTAGACTATCTCAAGAAGAG
GCCGACGAGCTCATGGAAGATAACTACAGCTCTTGCATGACGACCTGAAG
CAACCGGACGTGCGAAGGGCCTTCGAGCACTGGACCGGTCGGAGTAGACT
ATCTCAAGAAGAGGCCGACGAGCTCATGGAAGATAACTACAGGATCGGGT
CAGTCTGCGAGAAGATGGTGGAGCTGCAGACCTGCTGCAAGGCGGCCGGG
ATGGGCCTGCCGCTGGCGAGGGTGCTCGCGGGCAAGGGCCTCTACGACAG
CGAGGGTAGCGATCTCGAAACTAGTGGGACGAGCTACAACCCCATGGGAG
AGAGCAGTAGTGCCGACGTAGCGCATCCGCGGAGCCTCGATACGTCGAAT
GAGCGGCGGGGGGGAGAACGACCGGCGGAACCGAAACCGGAACCCGTGGC
GGCGAGTCAGCCGTCGGCGTGTCACGGAACGGAGCCCCCCACGTGGAAGC
AGGCGTTGGTTGGGGAGTTTTGGAGAGCGTTGCTGGCGTGCGCGTGCGCG
GTCGTTTTCAGCCTCGCGTTGAAATTCTTCCGAGGGGAGAACGCGCTTGG
TGGTGCGGGTCCGCACGAGGGGGGGCTACCTGATCACGAAGAATTTTGAG
ATCGGGTCAGTCTGCGAGAAGATGGTGGAGCTGCAGACCTGCTGCAAGGC
GGCCGGGATGGGCCTGCCGCTGGCGAGGGTGCTCGCGGGCAAGGGCCTCT
ACGACAGCGAGGGTAGCGATCTCGAAACTAGTGGGACGAGCTACAACCCC
ATGGGAGAGAGCAGTAGTGCCGACGTAGCGCATCCGCGGAGCCTCGATAC
GTCGAATGAGCGGCGGGGGGGAGAACGACCGGCGGAACCGAAACCGGAAC
CCGTGGCGGCGAGTCAGCCGTCGGCGTGTCACGGAACGGAGCCCCCCACG
TGGAAGCAGGCGTTGGTTGGGGAGTTTTGGAGAGCGTTGCTGGCGTGCGC
GTGCGCGGTCGTTTTCAGCCTCGCGTTGAAATTCTTCCGAGGGGAGAACG
CGCTTGGTGGTGCGGGTCCGCACGAGGGGGGGCTACCTGATCACGAAGAA
TTTTGA
back to top